Louise Crowe’s research while affiliated with National University of Ireland, Maynooth and other places

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Publications (4)


Fig. 2. Progression of EoE pathology in the L2-IL5 OXA mouse is accompanied by a remodeled proteome. (A) Schematic of esophageal tissue protein fraction processing into cellular, soluble ECM (sECM), and insoluble ECM (iECM). (B) The cellular, sECM, and iECM fractions of uninflamed, acute, and chronic mice were analyzed for similarity via principal component analysis (PCA) where control is blue, acute is red, and chronic is green (n = 5/group). (C) Venn diagram of the total numbers of significantly altered proteins in either acute, chronic, or their overlap when comparing to control uninflamed esophagi. Red text corresponds to the top three up-regulated genes and blue text corresponds with the top three down-regulated proteins in magnitude representing acute mice v uninflamed, chronic mice v uninflamed, and the overlapping proteins significantly altered in both acute and chronic mice v uninflamed. (D) The top 33 most significantly enriched pathways identified via Gene Set Enrichment Analysis (GSEA) of cellular, sECM, or iECM were combined and plotted, representing both statistical significance (P.adj) and protein ratios. (E) Representative GSEA plots and heat maps for leading edge genes for DNA replication, innate immune response, and regulation of cytoskeleton organization are presented. Statistical significance was assessed using the Benjamini Hochberg false discovery rate (FDR), *P < 0.05. Data are expressed as means ± SEM and represents a minimum of three experimental repeats.
Fig. 4. Progression of EoE inflammation in the L2-IL5 OXA mouse is accompanied by changes in ECM remodeling and lamina propria fibrosis. (A) Trichrome staining reveals increased collagen deposition in the lamina propria and muscle compartments of the esophagus with the progression of acute and chronic disease (n
Fig. 5. Progression of EoE to FS-EoE is accompanied by changes in stress-responsive keratins and ECM proteins. (A) RNAseq analysis with each point representing control (n = 7), non-FS-EoE (n = 11), or FS-EoE (n = 9) patients. Selected analysis of homeostatic keratins, KRT14, KRT4 and KRT13, and of stressassociated keratins, KRT16, KRT6A and KRT17. Statistical significance was assessed using one-way ANOVA with Tukeys multiple comparisons reporting adjusted P values *P < 0.05. (B) Representative immunofluorescent photomicrographs show increased epithelial KRT16 and basal lamina TNC in active EoE compared to uninflamed control esophagus. (C) Esophageal epithelial cells in vitro respond to type-2 cytokines IL-13 and IL-4, by inducing expression of KRT16 and TNC. Statistical significance was assessed using Benjamini Hochberg false discovery rate (FDR) *P < 0.05. (D) Heatmap representation of RNASeq (Log2FC) analysis 38 and (E) proteomic analysis (LogFC) 19 of basement membrane and collagen genes. Statistical significance was assessed using one-way ANOVA with Tukeys multiple comparisons reporting adjusted P values *P < 0.05. Data are expressed as mean ± SEM where appropriate and represents a minimum of three experimental repeats.
Proteomics subfractions capture soluble and insoluble ECM proteins.
CSF1-dependent macrophage support matrisome and epithelial stress-induced keratin remodeling in Eosinophilic esophagitis
  • Article
  • Full-text available

September 2024

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19 Reads

Mucosal Immunology

Taylor M. Benson

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Juliet A. Hammer

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The ARDS microenvironment enhances MSC-induced repair via VEGF in experimental acute lung inflammation

August 2024

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49 Reads

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1 Citation

Molecular Therapy

Clinical trials investigating the potential of mesenchymal stromal cells (MSCs) for the treatment of inflammatory diseases, such as acute respiratory distress syndrome (ARDS), have been disappointing, with less than 50% of patients responding to treatment. Licensed MSCs show enhanced therapeutic efficacy in response to cytokine-mediated activation signals. There are two distinct sub-phenotypes of ARDS: hypo- and hyper-inflammatory. We hypothesized that pre-licensing MSCs in a hyper-inflammatory ARDS environment would enhance their therapeutic efficacy in acute lung inflammation (ALI). Serum samples from patients with ARDS were segregated into hypo- and hyper-inflammatory categories based on interleukin (IL)-6 levels. MSCs were licensed with pooled serum from patients with hypo- or hyper-inflammatory ARDS or healthy serum controls. Our findings show that hyper-inflammatory ARDS pre-licensed MSC conditioned medium (MSC-CMHyper) led to a significant enrichment in tight junction expression and enhanced barrier integrity in lung epithelial cells in vitro and in vivo in a vascular endothelial growth factor (VEGF)-dependent manner. Importantly, while both MSC-CMHypo and MSC-CMHyper significantly reduced IL-6 and tumor necrosis factor alpha (TNF-α) levels in the bronchoalveolar lavage fluid (BALF) of lipopolysaccharide (LPS)-induced ALI mice, only MSC-CMHyper significantly reduced lung permeability and overall clinical outcomes including weight loss and clinical score. Thus, the hypo- and hyper-inflammatory ARDS environments may differentially influence MSC cytoprotective and immunomodulatory functions.



Hypercapnia alters mitochondrial gene expression and acylcarnitine production in monocytes

March 2023

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47 Reads

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6 Citations

Immunology and Cell Biology

CO2 is produced during aerobic respiration. Normally, levels of CO2 in the blood are tightly regulated but pCO2 can rise (hypercapnia, pCO2 > 45 mmHg) in patients with lung diseases e.g. Chronic Obstructive Pulmonary Disease (COPD). Hypercapnia is a risk factor in COPD but may be of benefit in the context of destructive inflammation. The effects of CO2 per se, on transcription, independent of pH change are poorly understood and warrant further investigation. Here we elucidate the influence of hypercapnia on monocytes and macrophages through integration of state-of-the-art RNA-sequencing, metabolic and metabolomic approaches. THP-1 monocytes and IL4 polarised primary murine macrophages were exposed to 5% CO2 Vs 10% CO2 for up to 24 h in pH- buffered conditions. In hypercapnia, we identified ~370 differentially expressed genes (DEGs) under basal and ~1889 DEGs under LPS-stimulated conditions in monocytes. Transcripts relating to both mitochondrial and nuclear-encoded gene expression were enhanced in hypercapnia in basal and LPS-stimulated cells. Mitochondrial DNA content was not enhanced, but acylcarnitine species and genes associated with fatty acid metabolism were increased in hypercapnia. Primary macrophages exposed to hypercapnia also increased activation of genes associated with fatty acid metabolism and reduced activation of genes associated with glycolysis. Thus, hypercapnia elicits metabolic shifts in lipid metabolism in monocytes and macrophages under pH buffered conditions. These data indicate that CO2 is an important modulator of monocyte transcription that can influence immunometabolic signalling in immune cells in hypercapnia. These immunometabolic insights may be of benefit in the treatment of patients experiencing hypercapnia.

Citations (2)


... Activation of MSCs boosts their cytoprotective effects through the production of soluble mediators [55,56]. MSCs were licensed with different concentrations of rhMIF (1, 100, or 400 ng/mL) or with BMDM supernatants from HDM-challenged human MIFexpressing CATT 7 mice, MIF −/− and WT mice ( Figure 2A). ...

Reference:

The VEGF‐Mediated Cytoprotective Ability of MIF‐Licensed Mesenchymal Stromal Cells in House Dust Mite‐Induced Epithelial Damage
The ARDS microenvironment enhances MSC-induced repair via VEGF in experimental acute lung inflammation

Molecular Therapy

... Exposure to CO 2 can promote neoangiogenesis, the formation of new blood vessels. This is especially advantageous for wound healing and aesthetic procedures because it improves vascularization and supports skin regeneration Moris et al. (2023) Collagen Production Stimulation CO₂ therapy is shown to boost collagen production, leading to better skin elasticity and appearance by improving blood flow and oxygenation, which stimulates collagen synthesis in skin cells Bagherani et al. (2023); Takano et al. (2023) Transcutaneous Therapies/Carboxytherapy CO₂ is widely used in therapeutic applications within aesthetics and medicine, treating skin conditions such as cellulite, stretch marks, and scars, and improving vascular health Bagherani et al. (2023) Therapeutic Hypercapnia Hypercapnia may stabilize brain and lung tissue, potentially via pH modulation. This suggests hypercapnia can influence cellular function by altering the extracellular environment ...

Hypercapnia alters mitochondrial gene expression and acylcarnitine production in monocytes
  • Citing Article
  • March 2023

Immunology and Cell Biology