Linda L. Garland’s research while affiliated with University of Arizona and other places

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Publications (80)


Study design for “all comers” pleural effusion for Sentinel-MPE liquid biopsy test. This was a prospective case control study with three different cohorts of pleural effusion disease benign pleural effusion subjects, paramalignant pleural effusion cases, and malignant pleural effusion individuals.
Performance of Sentinel-MPE liquid biopsy test in detecting malignancy in pleural effusion. (A) Waterfall plot displaying the methylation signal from the Sentinel-MPE liquid biopsy test for all 104 participants in the study. (B) Box plots displaying the mean methylation signal of benign pleural effusion (BPE), indeterminate pleural effusion (IPE), and malignant pleural effusion cohorts (MPE). (C) Receiver operating curve analysis of combined (MPE) and indeterminate effusion (IPE) groups compared to (BPE) group. The methylation signal levels were markedly higher in MPE and IPE groups relative to BPE group. (D) Receiver operating curve analysis of MPE versus BPE. There was an increase in the performance of the Sentinel-MPE liquid biopsy test. (E) Receiver operating curve analysis of combined MPE and IPE breast and lung cancer subjects compared to BPE subjects. Note the there was a further improvement in the performance of the Sentinel-MPE test for these two common cancer types.
Cell-free DNA methylation analysis as a marker of malignancy in pleural fluid
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  • Full-text available

February 2024

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33 Reads

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4 Citations

Billie Bixby

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Jyoti Lenka

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Mark A. Nelson

Diagnosis of malignant pleural effusion (MPE) is made by cytological examination of pleural fluid or histological examination of pleural tissue from biopsy. Unfortunately, detection of malignancy using cytology has an overall sensitivity of 50%, and is dependent upon tumor load, volume of fluid assessed, and cytopathologist experience. The diagnostic yield of pleural fluid cytology is also compromised by low abundance of tumor cells or when morphology is obscured by inflammation or reactive mesothelial cells. A reliable molecular marker that may complement fluid cytology for the diagnosis of malignant pleural effusion is needed. The purpose of this study was to establish a molecular diagnostic approach based on pleural effusion cell-free DNA methylation analysis for the differential diagnosis of malignant pleural effusion and benign pleural effusion. This was a blind, prospective case–control biomarker study. We recruited 104 patients with pleural effusion for the study. We collected pleural fluid from patients with: MPE (n = 48), indeterminate pleural effusion in subjects with known malignancy or IPE (n = 28), and benign PE (n = 28), and performed the Sentinel-MPE liquid biopsy assay. The methylation level of Sentinel-MPE was markedly higher in the MPE samples compared to BPE control samples (p < 0.0001) and the same tendency was observed relative to IPE (p = 0.004). We also noted that the methylation signal was significantly higher in IPE relative to BPE (p < 0.001). We also assessed the diagnostic efficiency of the Sentinel-MPE test by performing receiver operating characteristic analysis (ROC). For the ROC analysis we combined the malignant and indeterminate pleural effusion groups (n = 76) and compared against the benign group (n = 28). The detection sensitivity and specificity of the Sentinel-MPE test was high (AUC = 0.912). The Sentinel-MPE appears to have better performance characteristics than cytology analysis. However, combining Sentinel-MPE with cytology analysis could be an even more effective approach for the diagnosis of MPE. The Sentinel-MPE test can discriminate between BPE and MPE. The Sentinel-MPE liquid biopsy test can detect aberrant DNA in several different tumor types. The Sentinel-MPE test can be a complementary tool to cytology in the diagnosis of MPE.

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Diagnostic performance of Sentinel-MPE test for BPE and MPE.
Cell-Free DNA Methylation Analysis as a Marker of Malignancy in Pleural Fluid

September 2023

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27 Reads

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1 Citation

Background Diagnosis of malignant pleural effusion (MPE) is made by cytological examination of pleural fluid or histological examination of pleural tissue from biopsy. Unfortunately, detection of malignancy using cytology has an overall sensitivity of 50%, and is dependent upon tumor load, volume of fluid assessed, and cytopathologist experience. The diagnostic yield of pleural fluid cytology is also compromised by low abundance of tumor cells or when morphology is obscured by inflammation or reactive mesothelial cells. A reliable molecular marker that may complement fluid cytology malignant pleural effusion diagnosis is needed. The purpose of this study was to establish a molecular diagnostic approach based on pleural effusion cell-free DNA methylation analysis for the differential diagnosis of malignant pleural effusion and benign pleural effusion. Results This was a blind, prospective case-control biomarker study. We recruited 104 patients with pleural effusion for the study. We collected pleural fluid from patients with: MPE (n = 48), PPE (n = 28), and benign PE (n = 28), and performed the Sentinel-MPE liquid biopsy assay. The methylation level of Sentinel-MPE was markedly higher in the MPE samples compared to BPE control samples (p < 0.0001) and the same tendency was observed relative to PPE (p = 0.004). We also noted that the methylation signal was significantly higher in PPE relative to BPE (p < 0.001). We also assessed the diagnostic efficiency of the Sentinel-MPE test by performing receiver operating characteristic analysis (ROC). For the ROC analysis we combined the malignant and paramalignant groups (n = 76) and compared against the benign group (n = 28). The detection sensitivity and specificity of the Sentinel-MPE test was high (AUC = 0.912). The Sentinel-MPE appears to have better performance characteristics than cytology analysis. However, combining Sentinel-MPE with cytology analysis could be an even more effective approach for the diagnosis of MPE. Conclusions The Sentinel-MPE test can discriminate between BPE and MPE. The Sentinel-MPE liquid biopsy test can detect aberrant DNA in several different tumor types. The Sentinel-MPE test can be a complementary tool to cytology in the diagnosis of MPE.




Clinical Study of Aspirin and Zileuton on Biomarkers of Tobacco-Related Carcinogenesis in Current Smokers

June 2022

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59 Reads

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3 Citations

The chemopreventive effect of aspirin and other non-steroidal anti-inflammatory drugs (NSAIDs) on lung cancer risk is supported by epidemiologic and preclinical studies. Zileuton, a 5-lipoxygenase inhibitor, has additive activity with NSAIDs against tobacco carcinogenesis in preclinical models. We hypothesized that cyclooxygenase plus 5-lipoxygenase inhibition would be more effective than a placebo in modulating the nasal epithelium gene signatures of tobacco exposure and lung cancer. We conducted a randomized, double-blinded study of low-dose aspirin plus zileuton vs. double placebo in current smokers to compare the modulating effects on nasal gene expression and arachidonic acid metabolism. In total, 63 participants took aspirin 81 mg daily plus zileuton (Zyflo CR) 600 mg BID or the placebo for 12 weeks. Nasal brushes from the baseline, end-of-intervention, and one-week post intervention were profiled via microarray. Aspirin plus zilueton had minimal effects on the modulation of the nasal or bronchial gene expression signatures of smoking, lung cancer, and COPD but favorably modulated a bronchial gene expression signature of squamous dysplasia. Aspirin plus zileuton suppressed urinary leukotriene but not prostaglandin E2, suggesting shunting through the cyclooxygenase pathway when combined with 5-lipoxygenase inhibition. Continued investigation of leukotriene inhibitors is needed to confirm these findings, understand the long-term effects on the airway epithelium, and identify the safest, optimally dosed agents.


Study schema.
CONSORT diagram.
Baseline characteristics.
Urinary excretion of carcinogen metabolites.
Randomized Crossover Trial Evaluating Detoxification of Tobacco Carcinogens by Broccoli Seed and Sprout Extract in Current Smokers

April 2022

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54 Reads

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8 Citations

Consumption of cruciferous vegetables, rich in the isothiocyanate glucoraphanin, is associated with reduced risk of tobacco-related cancers. Sulforaphane, released by hydrolysis of glucoraphanin, potently induces cytoprotective phase II enzymes. Sulforaphane decreased the incidence of oral cancer in the 4NQO carcinogenesis model. In residents of Qidong, China, broccoli seed and sprout extracts (BSSE) increased detoxification of air pollutants benzene and acrolein, also found in tobacco smoke. This randomized, crossover trial evaluated detoxification of tobacco carcinogens by the BSSE Avmacol® in otherwise healthy smokers. Participants were treated for 2 weeks with both low and higher-dose BSSE (148 µmol vs. 296 µmol of glucoraphanin daily), separated by a 2-week washout, with randomization to low-high vs. high-low sequence. The primary endpoint was detoxification of benzene, measured by urinary excretion of its mercapturic acid, SPMA. Secondary endpoints included bioavailability, detoxification of acrolein and crotonaldehyde, modulation by GST genotype, and toxicity. Forty-nine participants enrolled, including 26 (53%) females with median use of 20 cigarettes/day. Low and higher-dose BSSE showed a mean bioavailability of 11% and 10%, respectively. Higher-dose BSSE significantly upregulated urinary excretion of the mercapturic acids of benzene (p = 0.04), acrolein (p < 0.01), and crotonaldehyde (p = 0.02), independent of GST genotype. Retention and compliance were high resulting in early study completion. In conclusion, BSSE significantly upregulated detoxification of the tobacco carcinogens benzene, acrolein, and crotonaldehyde in current tobacco smokers.


Figure 1. CONSORT diagram. Note. LCSI = Lung Cancer Stigma Inventory
Developing an ACT-based intervention to address lung cancer stigma: Stakeholder recommendations and feasibility testing in two NCI-designated cancer centers

February 2022

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77 Reads

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9 Citations

Journal of Psychosocial Oncology

Objective: Few psychosocial interventions have been tailored to meet the unique needs of patients diagnosed with lung cancer. This pilot study developed and tested a six-week intervention for reducing lung cancer stigma.Design and Subjects: Guided by qualitative interviews conducted with 9 lung cancer patients and 5 thoracic oncology care providers, Acceptance and Commitment Therapy was adapted for treatment of lung cancer stigma (ACT-LCS). In a subsequent single arm pilot study, 22 lung cancer patients reporting high levels of stigma completed the intervention.Setting: NCI-designated cancer centers in the Southwestern and Eastern United States.Results: Of 46 eligible patients, 22 provided consent, with 20 completing the intervention (10 in-person, 10 telehealth). Overall stigma decreased across timepoints, largely driven by reductions in internalized stigma. There were also significant reductions in social isolation, sleep disturbance, and fatigue.Conclusions: The ACT-LCS protocol demonstrates preliminary feasibility and acceptability. This intervention may be particularly suited for helping patients navigate feelings associated with internalized stigma.



Abstract LB221: Randomized crossover trial evaluating detoxication of tobacco carcinogens by broccoli seed and sprout extract in heavy smokers

July 2021

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15 Reads

Cancer Research

p>Randomized crossover trial evaluating detoxication of tobacco carcinogens by broccoli seed and sprout extract in heavy smokersJulie E. Bauman, Chiu-Hsieh Hsu, Sara Centuori, Jose Guillen-Rodriguez, Linda Garland, Emily Ho, Lisa Bengtson, Malgorzata Wojtowicz, Eva Szabo, H-H Sherry ChowIntroduction: Diets high in cruciferous vegetables are associated with reduced risk of tobacco-related cancers. Crucifers are rich in the phytochemical glucoraphanin (GR), which is hydrolyzed by myrosinase to its bioactive form, sulforaphane (SF). SF upregulates the NRF2 transcription factor and downstream target genes in the antioxidant response element. As GR is concentrated in broccoli seeds relative to mature plants, broccoli seed preparations (BSP) are under development as chemopreventive agents. BSP increased detoxication of air pollutants including benzene in Qidong, China. Methods: We conducted a randomized crossover trial evaluating the detoxication of benzene and other tobacco carcinogens by the BSP Avmacol, tablets comprised of broccoli seed powder and broccoli sprout extract, in otherwise healthy smokers (≥ 20 pack-years). Each subject was treated with low and high dose BSP (70 vs. 140 GR equivalents daily for 2 weeks), separated by a 2-week washout, with randomization to low-high vs. high-low sequence. The primary endpoint was detoxication of benzene, measured by change in urinary excretion of its mercapturic acid metabolite (S-phenyl mercapturic acid, SPMA). Secondary endpoints included detoxication of the carcinogens acrolein and crotonaldehyde, and SF bioavailability assessed by urinary SF metabolites.Results: 49 subjects were randomized from Feb 2018-Nov 2019: 26 female, mean age 56.3. Treatment-related adverse events (AE) were gastrointestinal; most common were grade 1-2 bloating/cramping/abdominal pain (11; 22%), grade 1 diarrhea (11; 22%), grade 1 flatulence (10; 20%). No grade ≥ 3 AE were observed. One subject withdrew after unrelated AE. Compliance with BSP and biomarker measurements was 98%. Primary and secondary endpoints are presented in the Table. Conclusion: The BSP Avmacol was bioavailable as SF metabolites and significantly increased the acute detoxication products of benzene and acrolein in heavy smokers. Citation Format: Julie E. Bauman, Chiu-Hsieh Hsu, Sara Centuori, Jose Guillen-Rodriguez, Linda Garland, Emily Ho, Lisa Bengtson, Malgorzata Wojtowicz, Eva Szabo, H-H Sherry Chow. Randomized crossover trial evaluating detoxication of tobacco carcinogens by broccoli seed and sprout extract in heavy smokers [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2021; 2021 Apr 10-15 and May 17-21. Philadelphia (PA): AACR; Cancer Res 2021;81(13_Suppl):Abstract nr LB221.</p


A Dose-finding Study Followed by a Phase II Randomized, Placebo-controlled Trial of Chemoradiotherapy With or Without Veliparib in Stage III Non–small-cell Lung Cancer: SWOG 1206 (8811)

February 2021

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31 Reads

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18 Citations

Clinical Lung Cancer

Background: We conducted a 2-part study to evaluate the incorporation of veliparib, a PARP inhibitor, into chemoradiotherapy (CRT) for stage III non-small-cell lung cancer. Patients and methods: In the phase I part, patients were treated successively at 3 dose levels of veliparib (40, 80, and 120 mg) twice daily during CRT. In the phase II part, patients were randomized to receive veliparib or placebo during thoracic radiotherapy with concurrent weekly carboplatin and paclitaxel, followed by 2 cycles of consolidation carboplatin and paclitaxel with veliparib or placebo. The study was prematurely discontinued owing to the emergence of adjuvant immunotherapy as standard of care. Results: Of 21 patients enrolled in phase I, 2 patients developed dose-limiting toxicities (DLTs): 1 grade 3 esophagitis with dysphagia (at 40 mg) and 1 grade 3 esophagitis with dehydration (at 80 mg). No DLTs were seen at veliparib dose of 120 mg twice daily, which was selected for the phase II part that enrolled 31 eligible patients. Progression-free survival (PFS) was not different between the 2 arms (P = .20). For the veliparib and placebo arms, response rates were 56% and 69%, PFS at 1 year 47% and 46%, and overall survival at 1 year 89% and 54%, respectively. Conclusion: Veliparib with CRT was feasible and well tolerated. Efficacy could not accurately be determined because of early study closure. Nonetheless, there is enthusiasm for the evaluation of PARP inhibitors in lung cancer as predictive biomarkers are being developed and combinations with immunotherapy are attractive.


Citations (57)


... DNA methylation analysis of cell-free DNA in pleural fluid has proven effective in distinguishing MPEs from benign ones. BIXBY et al. [104] have shown that such AI-enhanced analysis can achieve AUC of 0.918, demonstrating high accuracy in detecting malignancy. ...

Reference:

Advanced imaging techniques and artificial intelligence in pleural diseases: a narrative review
Cell-free DNA methylation analysis as a marker of malignancy in pleural fluid

... Other studies have found that the promotion of coping strategies in CABG patients can be effective in improving risk factors in these patients (Mohammadi Pashaki et al., 2016) and increasing their quality of life (Tung et al., 2008). Undertaken during the COVID-19 pandemic, the study by Frey et al. showed that ovarian cancer survivors significantly employed a variety of coping strategies (Frey et al., 2021), while Ver Hoeve et al. found that previous experiences of patients with a chronic stressor (e.g., diagnosis and treatment of severe disease) may increase patients' flexibility to manage stressors, such as the COVID-19 pandemic (Ver Hoeve et al., 2022). ...

Coping with COVID-19 in Patients with Lung Cancer
  • Citing Article
  • September 2022

Oncology Issues

... Zileuton, selected as the reference drug in this study, is a 5-lipoxygenase inhibitor used in the treatment of asthma. It is administered for the prevention of asthma attacks due to its ability to inhibit inflammatory processes in the bronchi and prevent the formation of bronchial spastic conditions [71,72]. In addition, it also exhibits anti-angiogenic activity [73]. ...

Clinical Study of Aspirin and Zileuton on Biomarkers of Tobacco-Related Carcinogenesis in Current Smokers

... One recent study evaluated consuming a broccoli seed and sprouts extract (BSSE), enriched in GR and myrosinase, for risk reduction of tobacco-related head and neck squamous cell carcinoma (46). In this open-label, randomized, crossover design participants were treated for 2 weeks with both low (148 µmol GR) and higher-dose (296 µmol GR) BSSE Avmacol® separated by a 2-week washout. ...

Randomized Crossover Trial Evaluating Detoxification of Tobacco Carcinogens by Broccoli Seed and Sprout Extract in Current Smokers

... For patients with low levels of adaptation, healthcare professionals should focus on correcting the patient's sense of stigma and increasing stoma acceptance to boost confidence in disease recovery. Acceptance and Commitment Therapy (ACT) has been shown to effectively reduce stigma and promote disease acceptance in cancer patients (Kaplan et al. 2023;Fashler et al. 2018). Applying ACT to stoma patients could be a valuable approach in psychological care and merits further exploration. ...

Developing an ACT-based intervention to address lung cancer stigma: Stakeholder recommendations and feasibility testing in two NCI-designated cancer centers

Journal of Psychosocial Oncology

... Theoretically, PARP inhibitors disrupt base-excision repair, converting some non-lethal single-strand DNA breaks into lethal double-strand breaks. Clinical trials combining PARPi with external beam radiation therapy have been completed in triple-negative breast cancer [40], NSCLC [41], and pancreatic cancer [42]. The LuPARP phase 1 trial [43] combined 177Lu-PSMA-617 with olaparib in men with mCRPC. ...

A Dose-finding Study Followed by a Phase II Randomized, Placebo-controlled Trial of Chemoradiotherapy With or Without Veliparib in Stage III Non–small-cell Lung Cancer: SWOG 1206 (8811)
  • Citing Article
  • February 2021

Clinical Lung Cancer

... Four PRs were seen in 46 patients treated with cediranib; although this study did not meet the primary endpoint, a phase III study adding cediranib to cisplatin and pemetrexed in mesothelioma has opened. 26 Similarly, Jahan et al. 27 reported an ORR of 11% in 46 patients treated first line, with the VEGF and PDGF-targeting TKI vatalanib. These results are concordant with the response rate observed in our study, although the studies differed in selection of treatment naive or pretreated patients. ...

SWOG S0509: A phase II study of novel oral antiangiogenic agent AZD2171 (NSC-732208) in malignant pleural mesothelioma
  • Citing Article
  • May 2009

Journal of Clinical Oncology

... Dose limiting toxicities (including esophagitis) occurred in 2 out of 5 patients who received the max dose of 240 mg BID veliparib. Results from a separate multi-institution, placebo-controlled, randomized phase II trial comparing CRT outcomes with or without veliparib in unresectable Stage III NSCLC were also presented in abstract form at ASCO 2019 (NCT01386385) (21). Despite an accrual goal of 132 patients, the trial closed after accruing only 31 evaluable patients after data from the PACIFIC trial became available. ...

S1206: A dose-finding study followed by a phase II randomized placebo-controlled trial of chemoradiotherapy (CRT) with or without veliparib in stage III non-small cell lung cancer (NSCLC).
  • Citing Article
  • May 2019

Journal of Clinical Oncology

... However, brigatinib was associated with higher cost compared to alectinib (522.000$ vs 251.000$, respectively), thus showing that alectinib is the most cost-effective treatment [54]. ...

Economic evaluation crizotinib, alectinib and brigatinib in anaplastic lymphoma kinase positive (ALK+) non-small cell lung cancer (NSCLC).
  • Citing Article
  • May 2019

Journal of Clinical Oncology

... Rapamycin, an mTOR inhibitor, can inhibit proliferation of NF2-altered mesothelioma cells in vitro [52]. However, mTOR inhibitors such as everolimus had limited clinical activity in a Phase II clinical trial in an unselected mesothelioma cohort [53]. Currently, second and third-generation mTOR inhibitors and PI3K/mTOR inhibitors are under investigation in other malignancies [54]. ...

SWOG 0722: A phase II study of mTOR inhibitor everolimus (RAD001) in malignant pleural mesothelioma (MPM).
  • Citing Article
  • May 2012

Journal of Clinical Oncology