Lars Willmes’s research while affiliated with Leiden University and other places

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Publications (12)


Figure 1: Conceptual flow chart overview of the coupled simulation framework
Automated time series based grid extension planning using a coupled agent based simulation and genetic algorithm approach
  • Conference Paper
  • Full-text available

June 2019

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110 Reads

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3 Citations

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Lars Willmes

In recent years, the distribution grid planning process has faced the big challenge to integrate renewable energy sources in its planning methodology while preserving a secure and stable provision of electricity. With the currently observable efforts to electrify human mobility all around the world, another new challenge arises for the planning and operation of distribution grids. To address these challenges and to leverage the opportunities that are accompanied by them, new methods for the planning of distribution grids as well as planning decision-supportive approaches and algorithms are needed. The presented approach contributes to the described demands by means of a coupled approach, using both distribution grid time series as well as a genetic algorithm to support decision making in the planning process considering not only new assets for grid reinforcements and extensions but also smart-grid and operational opportunities.

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Cox Proportional Hazards Regression

July 2018

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514 Reads

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38 Citations

Background: Electronic patient files generate an enormous amount of medical data. These data can be used for research, such as prognostic modelling. Automatisation of statistical prognostication processes allows automatic updating of models when new data is gathered. The increase of power behind an automated prognostic model makes its predictive capability more reliable. Cox Proportional Hazard Regression is most frequently used in prognostication. Automatisation of a Cox model is possible, but we expect the updating-process to be time consuming. A possible solution lies in an alternative modelling technique, called Random Survival Forests. RSF is easily automated and is known to handle the proportionality assumption coherently and automatically. Performance of RSF is not yet tested on a large head-and-neck-oncological-dataset. This study investigates performance of head-and-neck-overall-survival-RSF-models. Performances are compared to a Cox model as golden standard. RSF might be an interesting alternative modelling approach for automatisation when performances are similar. Patients and methods: RSF models were created in R (Cox also in SPSS). Four RSF-splitting-rules were used: log-rank, conservation-of-events, log-rank-score and log-rank-approx. Models were based on historical data of 1371 primary head-and-neck patients, diagnosed between 1981 and 1998. Models contain eight covariates: tumour site, TNM-classification, age, gender, prior malignancies and comorbidity. Model performances were determined by Harrell's concordance error rate, where 33% of the original data served as a validation sample. Results: RSF and Cox models delivered similar error rates. The Cox model performed slightly better (error rate: 0.2826). The log-rank-splitting-approach gave best RSF performance (error rate: 0.2873). According to Cox and RSF, high T-classification, high N-classification and severe comorbidity are very important covariates in the model, while gender, mild comorbidity and a supraglottic larynx tumour are less important. A discrepancy arose regarding importance of M1-classification (see discussion). Conclusion: Both approaches delivered similar error rates. The Cox model gives a clinically understandable output on covariate impact while RSF becomes more of a black box. RSF complements the Cox model by giving more insight and confidence towards relative importance of model covariates. RSF can be recommended as approach-of-choice in automating survival analyses.


Novel head and neck cancer survival analysis approach: Random survival forests versus cox proportional hazards regression

January 2012

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215 Reads

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56 Citations

Head & Neck

Background: Electronic patient files generate an enormous amount of medical data. These data can be used for research, such as prognostic modeling. Automatization of statistical prognostication processes allows automatic updating of models when new data is gathered. The increase of power behind an automated prognostic model makes its predictive capability more reliable. Cox proportional hazard regression is most frequently used in prognostication. Automatization of a Cox model is possible, but we expect the updating process to be time-consuming. A possible solution lies in an alternative modeling technique called random survival forests (RSFs). RSF is easily automated and is known to handle the proportionality assumption coherently and automatically. Performance of RSF has not yet been tested on a large head and neck oncological dataset. This study investigates performance of head and neck overall survival of RSF models. Performances are compared to a Cox model as the "gold standard." RSF might be an interesting alternative modeling approach for automatization when performances are similar. Methods: RSF models were created in R (Cox also in SPSS). Four RSF splitting rules were used: log-rank, conservation of events, log-rank score, and log-rank approximation. Models were based on historical data of 1371 patients with primary head-and-neck cancer, diagnosed between 1981 and 1998. Models contain 8 covariates: tumor site, T classification, N classification, M classification, age, sex, prior malignancies, and comorbidity. Model performances were determined by Harrell's concordance error rate, in which 33% of the original data served as a validation sample. Results: RSF and Cox models delivered similar error rates. The Cox model performed slightly better (error rate, 0.2826). The log-rank splitting approach gave the best RSF performance (error rate, 0.2873). In accord with Cox and RSF models, high T classification, high N classification, and severe comorbidity are very important covariates in the model, whereas sex, mild comorbidity, and a supraglottic larynx tumor are less important. A discrepancy arose regarding the importance of M1 classification (see Discussion). Conclusion: Both approaches delivered similar error rates. The Cox model gives a clinically understandable output on covariate impact, whereas RSF becomes more of a "black box." RSF complements the Cox model by giving more insight and confidence toward relative importance of model covariates. RSF can be recommended as the approach of choice in automating survival analyses.


Evolution Strategies for Laser Pulse Compression

October 2007

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55 Reads

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17 Citations

Lecture Notes in Computer Science

This study describes first steps taken to bring evolutionary optimization technology from computer simulations to real world experimentation in physics laboratories. The approach taken considers a well understood Laser Pulse Compression problem accessible both to simulation and laboratory experimentation as a test function for variants of Evolution Strategies. The main focus lies on coping with the unavoidable noise present in laboratory experimentation. Results from simulations are compared to previous studies and to laboratory experiments.


Figure 2: 50-dimensional Ackley function, off-line learning, f = 4. The plain, unsupported strategy is clearly the best. The meta-model supported strategies perform almost identically.
Figure 4: 50-dimensional Rosenbrock function, off-line learning, f = 4. The plain, unsupported strategy performs best. The kriging supported strategy is slightly better than the neural net supported strategy.
Figure 5: 10-dimensional Keane function, off-line learning, f = 4. The neural net supported strategy yields the best results, while the plain strategy is worse than the kriging supported strategy. The plain strategy seems to be get stuck quite soon.
Figure 6: 50-dimensional Keane function, off-line learning, f = 4. All strategies show quite similar performances.
Comparing neural networks and Kriging for fitness approximation in evolutionary optimization

January 2004

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418 Reads

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76 Citations

Neural networks and Kriging method are compared for constructing fitness approximation models in evolutionary optimization algorithms. The two models are applied in an identical framework to the optimization of a number of well known test functions. In addition, two different ways of training the approximators are evaluated: in one setting the models are built off-line using data from previous optimization runs and in the other setting the models are built online from the data available from the current optimization.


Inverse Design of Cellular Automata by Genetic Algorithms: An Unconventional Programming Paradigm

January 2004

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168 Reads

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10 Citations

Lecture Notes in Computer Science

Evolving solutions rather than computing them certainly represents an unconventional programming approach. The general method- ology of evolutionary computation has already been known in computer science since more than 40 years, but their utilization to program other algorithms is a more recent invention. In this paper, we outline the ap- proach by giving an example where evolutionary algorithms serve to program cellular automata by designing rules for their iteration. Three dieren t goals of the cellular automata designed by the evolutionary al- gorithm are outlined, and the evolutionary algorithm indeed discovers rules for the CA which solve these problems ecien tly.


Evolution strategies for engineering design optimisation

December 2003

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8 Reads

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2 Citations

Computer simulations of complex engineering problems have become a standard tool of modern product development and design. The increasing computational power at modest costs leads to a growing interest in directly using computer simulation codes for automatic product optimization. Traditional numerical optimization methods have some drawbacks that make them difficult to use with complex simulation software. Gradient-based methods are always local optimizers, thus requiring additional methods such as random restarts to find global optima. Evolutionary optimization is a way to overcome some of these limitations. This chapter presents a paper that introduces evolution strategies as a robust and fault-tolerant optimization method, which does not rely on gradients, is easily adaptable to massively parallel computing systems and can be used for single and multiple-criteria optimization. It describes a complex and aerodynamical test problem that was solved by an evolution strategy. This paper introduces the basic elements of evolution strategies and addresses their important features such as self adaptation, robustness, and multiprocessor implementations.


Evolution strategies for engineering design optimisation

December 2003

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8 Reads

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2 Citations

Computer simulations of complex engineering problems have become a standard tool of modern product development and design. The increasing computational power at modest costs leads to a growing interest in directly using computer simulation codes for automatic product optimization. Traditional numerical optimization methods have some drawbacks that make them difficult to use with complex simulation software. Gradient-based methods are always local optimizers, thus requiring additional methods such as random restarts to find global optima. Evolutionary optimization is a way to overcome some of these limitations. This chapter presents a paper that introduces evolution strategies as a robust and fault-tolerant optimization method, which does not rely on gradients, is easily adaptable to massively parallel computing systems and can be used for single and multiple-criteria optimization. It describes a complex and aerodynamical test problem that was solved by an evolution strategy. This paper introduces the basic elements of evolution strategies and addresses their important features such as self adaptation, robustness, and multiprocessor implementations.


Multi-criteria Airfoil Design with Evolution Strategies

April 2003

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12 Reads

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1 Citation

Lecture Notes in Computer Science

In this paper we will describe the optimisation of a two-criteria wing-design problem where calculation of the objective function requires the solution of the two-dimensional Navier-Stokes equations. It will be shown that basic concepts of the Strength Pareto Evolutionary Algorithm 2 (SPEA2) and the Non dominated Sorting Genetic Algorithm II (NSGA-II) work well with Evolution Strategies. Results for the wing design problem are presented for the selection operators of SPEA2 and NSGA-II in combination with three different mutation operators. These results are compared with results found by a multi-objective Genetic Algorithm.


Evaluating Multi-criteria Evolutionary Algorithms for Airfoil Optimisation

September 2002

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93 Reads

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17 Citations

Lecture Notes in Computer Science

A new approach for multi criteria design optimisation is presented in the paper. The problem tackled with this approach is the 2- dimensional design of an aircraft wing. To carry the derandomized step size control also to the multi criteria applications, four different selection schemes are proposed. Furthermore, we present a new method for averaging results of multi objective evolutionary algorithms. This method is then used to compare the results achieved with the proposed algorithms.


Citations (9)


... How iteratively interacting process modules and information compression could be realised, was also part of the Agent.GridPlan project and can be reviewed in [12]. ...

Reference:

Large scale agent based simulation of distribution grid loading and its practical application
Automated time series based grid extension planning using a coupled agent based simulation and genetic algorithm approach

... Effective use of evolutionary and directional local search operators within available computational budget can be implemented https Subscripts avg averaged value during the optimization process by adaptive selection of p ls , probability for the local search operator [16]. Application of EAs to single-and multi-objective aerodynamic design optimization problems has been an active research topic in recent years [1,[17][18][19][20]. It is noted that past hybrid methods applied to aerodynamic optimization combining an EMOA and a gradientbased optimization method do not provide a general strategy on how to determine the frequency of conducting the gradient-based optimization [1]. ...

Multi-point airfoil optimization using evolution strategies
  • Citing Conference Paper
  • January 2000

... Many efforts have been made in the direction of developing automated methods for constructing CAs based on observed space-time diagrams. These include methods based on genetic algorithms (Bolt et al., 2018;Richards et al., 1990;Mitchell et al., 1996;Bäck et al., 2005;Sapin et al., 2003), genetic programming (Bandini et al., 2008;Maeda and Sakama, 2007;Andre et al., 1996), gene expression programming (Ferreira, 2001), other evolutionary algorithms (Kroczek and Zelinka, 2018), ant colony algorithms (Liu et al., 2008), machine learning approaches (Bull and Adamatzky, 2007;Gilpin, 2018), as well as direct construction algorithms (Adamatzky, 1994;Billings, 2000,2000;Sun et al., 2011). A review of the key methods is presented in Adamatzky (2012). ...

Inverse Design of Cellular Automata by Genetic Algorithms: An Unconventional Programming Paradigm

Lecture Notes in Computer Science

... Solving this problem may require a simultaneous optimization of all profiles while considering stacking constraints. Optimization algorithms for direct design are mainly gradient-based [18,32,72,92] methods and stochastic algorithms [82,114,119]. Also hybrid approaches combining gradient-based methods and stochastic algorithms are employed [67]. ...

Multi-criteria Airfoil Design with Evolution Strategies
  • Citing Conference Paper
  • April 2003

Lecture Notes in Computer Science

... In recent years the interest in the QC field grew also within the Computational Intelligence community, likely due to the popularity of Evolutionary Algorithms as the routinely employed optimization heuristics in closed QC learning loops (see, e.g., [23,24,25,26] ), in parallel to the growing understanding of QC search landscapes [27,28]. Furthermore, in the context of the current study, various DES routines also started to be deployed in the optimization of QC systems [29,30,31], along with the successful application of CMA-ES in experimental QC single-objective [32,33,34] and multi-objective [35] systems. The remainder of the manuscript is organized as follows. ...

Evolution Strategies for Laser Pulse Compression

Lecture Notes in Computer Science

... Since then, there have been numerous applications of optimization for such expensive problems, especially in the field of CFD. A multi-objective shape optimization of aerofoils (accounting for low-drag and high-lift) was investigated in [46]. A CFD-based shape optimization problem that aimed to minimize the mass of beams under structural constraints was presented in [38]. ...

Evaluating Multi-criteria Evolutionary Algorithms for Airfoil Optimisation

Lecture Notes in Computer Science

... The RSF performance has been evaluated several times previously. For instance comparative studies, using both of RSF and Cox proportional hazard, for modeling the survival of patients with different cancers as breast (Kurt Omurlu, Ture, & Tokatli, 2009), prostate (Gerds, Kattan, Schumacher, & Yu, 2013), head and neck (Datema et al., 2012), as well as patients with systolic heart failure (Hsich, Gorodeski, Blackstone, Ishwaran, & Lauer, 2011). Forests were also compared with variety of learning techniques (Mirmohammadi, Shishehgar, & Ghapanchi, 2014;Pang, Datta, & Zhao, 2010) and survival trees, as the forest elements (Yosefian, Mosa Farkhani, & Baneshi, 2015); but as far as we know, the RSF has never been compared with MoBRP. ...

Novel head and neck cancer survival analysis approach: Random survival forests versus cox proportional hazards regression
  • Citing Article
  • January 2012

Head & Neck

... In the traveling salesman problem, a GNN can be used to predict the regret associated with adding each edge to the solution to improve the computation of the fitness function of the LS algorithm [19]. Note that NNs are classically used in surrogate model-based optimization [20]. In [21], the authors introduce a GNN into a hybrid genetic search process to solve the vehicle routing problem. ...

Comparing neural networks and Kriging for fitness approximation in evolutionary optimization