Lakshitha Premathilake’s research while affiliated with Pacific Northwest National Laboratory and other places

The presence of invasive species is a growing concern in coastal marine ecosystems because of their adverse effects on biodiversity. The European green crab Carcinus maenas (EGC) is a small crab inhabiting inshore areas. Although it is native to the Northeast Atlantic Ocean and Baltic Sea, its distribution has expanded to North America, where it is an invasive species. Its main food sources are small invertebrate species that support valuable fisheries in the USA. The first presence of EGC in northern Washington was observed around 20 yr ago, along the Pacific Coast of the USA. Recently, EGC has been detected throughout the Salish Sea (Washington, USA, and British Columbia, Canada) wherein spread dynamics are unknown. The overall distribution of EGC is mainly driven by larval dispersal and, in the Salish Sea and surrounding waters, the assessment of EGC population dynamics is essential to understand its migration patterns and prevent its future expansion. To investigate the dispersal patterns of EGC larvae, a larval dispersal model was developed which couples a regional model of hydrodynamic circulation with an individual-based model of ichthyoplankton dynamics. Simulations were performed over 9 yr (2013-2022) to analyze average larval transport trends in the Salish Sea and surrounding waters, interannual variability of EGC larval connectivity, and the influence of larval behavior on connectivity patterns. Lastly, areas were identified to inform invasive species management moving forward. The prediction of likely sources and settlement locations of EGC larvae from the model will help improve the management of the population in the Salish Sea and surrounding waters.

Enewetak Atoll underwent 43 historical nuclear tests from 1948 to 1958, including the first hydrogen bomb test, resulting in a substantial nuclear material fallout contaminating the Atoll and the lagoon waters. The radionuclide fallout material deposited in lagoon sediments and soil on the islands will remain for decades to come. With intensifying climate and extreme weather events, the possibility of redistribution of deposited radionuclide material has become a great concern. This study uses a numerical modeling approach to estimate the potential elevated radionuclide concentrations that can be distributed during storm events under current and future climates. We simulated three historical storm scenarios that are most likely to impact Atoll’s environment and remobilize the radionuclide-bound sediments. WRF-ARW was used to reconstruct these storm scenarios under current year (2015) and future year (2090) climates. Storm-induced ocean hydrodynamics conditions were generated using FVCOM. FVCOM-ICM was externally coupled to simulate the fate and transport of radionuclides. Given that the ²³⁹Pu is the largest fraction of the radionuclide inventory of the lagoon and Atoll islands, the model results show the highest average incremental ²³⁹Pu concentration that an island may be exposed to is 3.25E-4 Bq/m³ (becquerel per cubic meters), which is an increase of 84 times the average baseline/existing ²³⁹Pu concentration without the storm conditions. The overall increase in ²³⁹Pu average over all the islands of Atoll is about 20 folds relative to the baseline concentration. Despite the high relative increase ratios, a comprehensive exposure assessment is required to investigate the exposure risk. Further, due to the limitations of the study and uncertainties/biases in the historical data used, further research supported by field surveys to better characterize the current contamination level may be needed to make more accurate predictions. Supplementary Information The online version contains supplementary material available at 10.1038/s41598-025-85849-8.

Puget Sound is an urban estuary that exhibits persistent polychlorinated biphenyls (PCBs) contamination despite years of remediation efforts. For robust management actions, determining the timing, location, and magnitude of PCB loading sources and transport pathways using field data alone is challenging due to complex water circulation and biogeochemical processes. This study aims to develop an integrated modeling framework that couples complex estuarian circulation with biogeochemical processes and associated interactions with PCB kinetics. The model simulates PCB accumulation in the lower tropic food web, demonstrating PCB intrusion into primary producers and its biomagnification in pelagic consumers. The PCB data from a new field survey was used to calibrate/validate the new PCB modeling framework for Puget Sound. The software program of the modeling framework is available to the user community for the applications of toxic contaminants transport in marine waters.

Marine CO2 removal (CDR) using enhanced-alkalinity seawater discharge was simulated in the estuarine waters of the Salish Sea, Washington, US. The high-alkalinity seawater would be generated using bipolar membrane electrodialysis technology to remove acid and the alkaline stream returned to the sea. Response of the receiving waters was evaluated using a shoreline resolving hydrodynamic model with biogeochemistry, and carbonate chemistry. Two sites, and two deployment scales, each with enhanced TA of 2997 mmol m⁻³ and a pH of 9 were simulated. The effects on air-sea CO2 flux and pH in the near-field as well as over the larger estuary wide domain were assessed. The large-scale deployment (addition of 164 Mmoles TA yr⁻¹) in a small embayment (Sequim Bay, 12.5 km²) resulted in removal of 2066 T of CO2 (45% of total simulated) at rate of 3756 mmol m⁻² yr⁻¹, higher than the 63 mmol m⁻² yr⁻¹ required globally to remove 1.0 GT CO2 yr⁻¹. It also reduced acidity in the bay, ΔpH ≈ +0.1 pH units, an amount comparable to the historic impacts of anthropogenic acidification in the Salish Sea. The mixing and dilution of added TA with distance from the source results in reduced CDR rates such that comparable amount 2176 T CO2 yr⁻¹ was removed over >1000 fold larger area of the rest of the model domain. There is the potential for more removal occurring beyond the region modeled. The CDR from reduction of outgassing between October and May accounts for as much as 90% of total CDR simulated. Of the total, only 375 T CO2 yr⁻¹ (8%) was from the open shelf portion of the model domain. With shallow depths limiting vertical mixing, nearshore estuarine waters may provide a more rapid removal of CO2 using alkalinity enhancement relative to deeper oceanic sites.

The Salish Sea, located in the Pacific Northwest region of North America has complex currents and circulation features distributed over numerous interconnected deep basins with islands. Increased risk of exposure to oil spills and untreated wastewater from maritime emergencies and treatment plant failures have led to a need for quantifying residence and flushing characteristics at a sub-basin scale using a shoreline resolving hydrodynamic model. An unstructured grid model of the Salish Sea was developed using FVCOM with a ≈75–100m shoreline resolution. In addition to 7 tides and 23 salinity and temperature monitoring stations, an extensive currents data set from 135 stations collected over a span of three years was used for skill assessment and validation. Explicit forward computations were then conducted to define and quantify residence and flushing times in various sub-basins of interest using (a) Lagrangian particles and (b) Numerical/virtual dye experiments. The results in most basins show expected seasonal variability with longer flushing time associated with summer lower tides and lower freshwater inflows. However, contrary to expectation, flushing time is significantly longer in wintertime in large fjord-like basins such as Hood Canal (≈138 days), likely due to increased stratification and reduced mixing. The flushing time for the Puget Sound region of the Salish Sea is ≈ 115 days, while Georgia Basin is 240 days when analyzed as stand-alone basins with zero background concentrations. When examined as part of the flushing of the entire Puget Sound filled with virtual dye, the compounded flushing times for embedded sub-basins can be significantly longer in order of magnitudes and largely dictated by the flushing time of Puget Sound. The computed residence and flushing time scales tabulated over 36 sub-basins provide an improved understanding of water renewal in the system, informing pollution management actions.

Effects and impacts of the Northeast Pacific marine heatwave of 2014–2016 on the inner coastal estuarine waters of the Salish Sea were examined using a combination of monitoring data and an established three-dimensional hydrodynamic and biogeochemical model of the region. The anomalous high temperatures reached the U.S. Pacific Northwest continental shelf toward the end of 2014 and primarily entered the Salish Sea waters through an existing strong estuarine exchange. Elevated temperatures up to + 2.3°C were observed at the monitoring stations throughout 2015 and 2016 relative to 2013 before dissipating in 2017. The hydrodynamic and biogeochemical responses to this circulating high-temperature event were examined using the Salish Sea Model over a 5-year window from 2013 to 2017. Responses of conventional water-quality indicator variables, such as temperature and salinity, nutrients and phytoplankton, zooplankton, dissolved oxygen, and pH, were evaluated relative to a baseline without the marine heatwave forcing. The simulation results relative to 2014 show an increase in biological activity (+14%, and 6% Δ phytoplankton biomass, respectively) during the peak heatwave year 2015 and 2016 propagating toward higher zooplankton biomass (+14%, +18% Δ mesozooplankton biomass). However, sensitivity tests show that this increase was a direct result of higher freshwater and associated nutrient loads accompanied by stronger estuarine exchange with the Pacific Ocean rather than warming due to the heatwave. Strong vertical circulation and mixing provided mitigation with only ≈+0.6°C domain-wide annual average temperature increase within Salish Sea, and served as a physical buffer to keep waters cooler relative to the continental shelf during the marine heatwave.