Krishan Kumar’s research while affiliated with University of the Basque Country and other places

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Publications (46)


Enzyme-Polymer Hybrids for Chemoenzymatic Catalysis
  • Chapter

March 2025

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9 Reads

Krishan Kumar

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Aitor Ontoria

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Enzyme-polymer hybrids combine the resources provided by nature – enzymes – with a chemical toolbox – synthetic polymers – in the laboratory for carrying out complex chemical reactions with high selectivity outside of cellular machinery. Recent advances in polymer chemistry have opened new opportunities for imparting novel, adjustable functionalities into enzymes, which act as an anchoring site for precise accommodation of inorganic catalysts (nanoparticles, nanoclusters, and single atoms) and give rise to the creation of artificial multicatalytic systems. This book chapter summarizes the latest progress in designing supramolecular catalytic hybrid materials with applications in chemoenzymatic reactions. Additionally, it discusses the challenges and limitations in this field, along with potential future directions.


Diagram showing the relationships among surface free energy, mass, and specific activities of SMAs. Surface free energy is directly related to the metal sites in the metallic components. High surface free energies of the metallic components produce several active metal sites for chemical interactions with the support materials. Discrete energy levels appear at the band‐edges. VB, valence band; BO, band overlap; and CB, conduction band.
Historical developments of SMA/DMA/TMA/MMA‐based materials.
Illustration of the strong electrostatic adsorption method implemented over a wide pH range of 0–14.[⁵³]
Setups of the hydrothermal and solvothermal processes.
Schematic of the ball‐milling process for material preparation.

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Materials Containing Single‐, Di‐, Tri‐, and Multi‐Metal Atoms Bonded to C, N, S, P, B, and O Species as Advanced Catalysts for Energy, Sensor, and Biomedical Applications
  • Literature Review
  • Full-text available

July 2024

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954 Reads

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27 Citations

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Krishan Kumar

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[...]

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Modifying the coordination or local environments of single‐, di‐, tri‐, and multi‐metal atom (SMA/DMA/TMA/MMA)‐based materials is one of the best strategies for increasing the catalytic activities, selectivity, and long‐term durability of these materials. Advanced sheet materials supported by metal atom‐based materials have become a critical topic in the fields of renewable energy conversion systems, storage devices, sensors, and biomedicine owing to the maximum atom utilization efficiency, precisely located metal centers, specific electron configurations, unique reactivity, and precise chemical tunability. Several sheet materials offer excellent support for metal atom‐based materials and are attractive for applications in energy, sensors, and medical research, such as in oxygen reduction, oxygen production, hydrogen generation, fuel production, selective chemical detection, and enzymatic reactions. The strong metal–metal and metal–carbon with metal–heteroatom (i.e., N, S, P, B, and O) bonds stabilize and optimize the electronic structures of the metal atoms due to strong interfacial interactions, yielding excellent catalytic activities. These materials provide excellent models for understanding the fundamental problems with multistep chemical reactions. This review summarizes the substrate structure‐activity relationship of metal atom‐based materials with different active sites based on experimental and theoretical data. Additionally, the new synthesis procedures, physicochemical characterizations, and energy and biomedical applications are discussed. Finally, the remaining challenges in developing efficient SMA/DMA/TMA/MMA‐based materials are presented.

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Schematic illustration of solid‐liquid equilibrium phase diagrams for hypothetical mixtures of A and B components displaying thermodynamic ideal behavior (dashed black line, example of a eutectic solvent) or negative deviations from the thermodynamic ideality (dashed red line, instance of a DES). Adapted with permission from reference [6].
of different biocatalytic reactions that could be carried out in DES‐supporting eutectogels. Created with BioRender.com.
Representation of the photopolymerization process of a DEM in the presence of an enzyme to produce a hybrid PDES supporting network. Created with BioRender.com.
Schematic representation of the concept of enzyme immobilization within eutectogels. This technology could also be used to support chemoenzymatic reactions due to the exceptional properties given by the scaffold: three‐dimensionality, excellent solvent environment, and the possibility of confinement. Created with BioRender.com.
Eutectogels as Promising Materials in Biocatalysis

May 2024

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205 Reads

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5 Citations

The entrapment of deep eutectic solvents (DES) and eutectic systems into porous scaffolds renders a new class of soft and nonvolatile materials called eutectogels that have recently stepped into the spotlight in different areas ranging from electronics to drug delivery. Recent progress in the use of DES in biocatalysis, where they have been demonstrated to improve substrate supply, conversion, and enzyme stability, has opened an unparalleled opportunity to exploit the merits of eutectogels for immobilizing biological catalysts. The resulting functional materials could outperform traditional hydrogels and ionic liquid gels, offering fresh perspectives to broaden the application scope of many enzymes. In this perspective, we go into the potential of eutectogels as innovative scaffolds that support biocatalytic reactions and discuss different applications where these systems could show plain benefits compared to traditional materials. Future directions for this newly developed technology are highlighted.



Characterization of the cobalt‐loaded biohybrids. A) Immobilization yields (as % of offered GOx, in bars. The chemical structure of the inserted functional groups is represented on top of each of the bar) and [Co(II)]:[GOx] molar ratio measured by ICP‐MS (in red crosses). B) Normalized ATR‐FTIR spectra of Co@GOx samples with the relevant peaks highlighted: (i) Amide I band at ca. 1645 cm⁻¹; (ii) asymmetric and symmetric stretching vibrations typical of phosphates at ca. 1011 cm⁻¹. C) Normalized Raman spectra of Co@GOx samples with the relevant peaks highlighted: (i) the stretching vibrations of phosphates at 962 cm⁻¹; (ii) 1400 cm⁻¹ deformation vibration band of CH2 groups from proteins; and (iii) 1605 cm⁻¹ band from the C═C stretching of the imidazole moiety. D) Normalized XPS spectra measured for the cobalt biohybrids zoomed in in the Co 2p region: (i) Co 2p1/2 main peak at ca. 803 eV shows a clear shift in Co@GOx‐I and Co@GOx‐I/A; (ii) Co 2p2/3 main peak at ca. 781 eV.
ESEM pictographs of the engineered cobalt biohybrids after 5 h of incubation fabricated from A) GOx (72 h); B) GOx‐P; C) GOx‐C; D) GOx‐I; E) GOx‐A (a zoomed‐in image of the hybrids is provided); and F) GOx‐I/A. Insets: (top right) photographs of the solid precipitates of each sample; (top left) schematic depiction of each of the hybrids used to represent the hybrids in Scheme 2. Scale bar: 5 µm.
CV measurements were performed with cobalt biohybrids coated glassy carbon electrodes for glucose detection. A) CV measurements for the set of cobalt biohybrids in the presence of glucose (10 mm) and ferrocene methanol (100 µm). Measurements monitored for Co@GOx‐P, Co@GOx‐C, and Co@GOx‐A coated electrodes are zoomed in for clarity. Unmodified electrodes in the presence of ferrocene methanol (Unmodified, black) and modified electrodes in the absence of redox mediator in solution (Buffer, grey) were tested as controls; B) CV measurements of Co@GOx‐I and Co@GOx‐I/A in the presence of glucose (10 mm) and in the absence of the soluble redox mediator; C and D) CV responses upon the deposition of 2 µL (in C) or 3 µL (in D) of Co@GOx‐I onto the carbon electrodes. The modified electrodes were measured under ambient conditions or the exclusion of O2. E) Measurement of the linear response in the 0 to 6 mm glucose concentration range for electrodes coated with 2 and 3 µL of sample. F) Response of the coated electrodes (2 and 3 µL) over a larger glucose concentration range and fitting of the obtained responses to a Michaelis‐Menten model. Measurements in B, C, D, E, and F were performed without the redox mediator in solution.
The preparation of the engineered cobalt biohybrids entailed the fabrication of a single enzyme nanogel (SEN) library (i) with distinct polymeric mantles decorated with different chemical functionalities (R). Upon triggering the biomineralization with Co(NO3)2 in PBS, each of the functionalities (imidazole, propylamine, carboxylic acid, ethyl phosphate) leads to the formation of hybrids of varied composition, morphology, and catalytic performance (ii). Finally, their use for the electrochemical detection of glucose (with and without the addition of a redox mediator in solution) over a carbon electrode is tested (iii).
Proposed growth mechanisms of the cobalt biohybrids are presented in this work. A) GOx, GOx‐C, and GOx‐P likely share the same assembly mechanism: the negative charge of the protein triggers the interaction of cobalt cations through electrostatic interactions, favoring the nucleation points and speeding up the biomineralization process; B) positively charged GOx‐A would trigger the accumulation of phosphates around the nanogels; C) multivalent imidazole ligands present in Co@GOx‐I and Co@GOx‐I/A would coordinate cobalt cations, triggering the fast aggregation of the nanogels. These aggregates would generate the nucleation sites from which the cobalt phosphate is formed.
Engineered Metal‐Loaded Biohybrids to Promote the Attachment and Electron‐Shuttling between Enzymes and Carbon Electrodes

March 2024

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64 Reads

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8 Citations

The inorganic content and the catalytic performance pose metal‐loaded enzyme nanoflowers as promising candidates for developing bioelectrodes capable of functioning without the external addition of a redox mediator. However, these protein‐inorganic hybrids have yet to be successfully applied in combination with electrode materials. Herein, the synthesis procedure of these bionanomaterials is reproposed to precisely control the morphology, composition, and performance of this particular protein‐mineral hybrid, formed by glucose oxidase and cobalt phosphate. This approach aims to enhance the adherence and electron mobility between the enzyme and a carbon electrode. The strategy relies on dressing the protein in a tailored thin nanogel with multivalent chemical motifs. The functional groups of the polymer facilitate the fast protein sequence‐independent biomineralization. Furthermore, the engineered enzymes enable the fabrication of robust cobalt‐loaded enzyme inorganic hybrids with exceptional protein loads, exceeding 90% immobilization yields. Notably, these engineered biohybrids can be readily deposited onto flat electrode surfaces without requiring chemical pre‐treatment. The resulting bioelectrodes are robust and exhibit electrochemical responses even without the addition of a redox mediator, suggesting that cobalt complexes promote electron wiring between the active site of the enzyme and the electrode.


Influence of ionic liquid modified gold nanoparticles on conformational transition of poly(N-isopropylacrylamide)-b-poly(acryloylmorpholine) block copolymer

March 2024

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53 Reads

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1 Citation

Journal of Industrial and Engineering Chemistry

Utilizing stimuli-responsive polymers for surface modification of nanoparticle allows the adjustment of properties for individual system; however, limited research explores the impact of ionic liquid-modified gold nanoparticles (AuNPs) on the conformational phase transition of block copolymers. Herein, we synthesized poly(N-isopropylacrylamide)-b-poly(acryloylmorpholine) (PNIPAM-b-PACMO) copolymers by reversible addition − fragmentation chain-transfer polymerization and investigated the effect of ionic-liquid modified AuNPs (IL-AuNPs) on the aggregation behavior of the copolymer. Copolymerization of PNIPAM with PACMO shifted the lower critical solution temperature (LCST) towards higher temperature in comparison to LCST value of PNIPAM. Addition of IL-AuNPs further raises the transition temperature in concentration dependent manner. A more significant alteration in the transition temperature was observed in the presence of IL-AuNPs with a higher alkyl chain length. The variation in transition temperature of the copolymer by different IL-AuNPs yields benefits in the temperature responsive properties which can helpful for various applications.



Nanozymes with versatile redox capabilities inspired in metalloenzymes

November 2023

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90 Reads

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7 Citations

Nanoscale

Metalloenzymes represent exemplary systems in which an organic scaffold combines with a functional inorganic entity, resulting in excellent redox catalysts. Inspired by these natural hybrid biomolecules, biomolecular templates have garnered significant attention for the controlled synthesis of inorganic nanostructures. These nanostructures ultimately benefit from the protection and colloidal stabilization provided by the biomacromolecule. In this study, we have employed this strategy to prepare nanozymes with redox capabilities, utilizing the versatile catalytic profile of Pt-loaded nanomaterials. Thus, we have investigated protein-templated Pt-based nanoclusters of different sizes and compositions, which exhibit remarkable oxidase, catalase, and reductase-like activities. The interplay between the composition and catalytic activity highlighted the size of the nanocluster as the most prominent factor in determining the performance of the nanozymes. Additionally, we have demonstrated the use of protein-templated nanozymes as potential co-catalysts in combination with enzymes for coupled reactions, under both sequential and concurrent one-pot conditions. This study provides valuable insights into nanozyme design and its wide range of applications in the design of complex catalytic systems.


Citations (36)


... When combined with magnetic nanoparticles like manganese ferrite (MnFe 2 O 4 ), the nanocomposite leverages ROS generation and hyperthermia for tumour destruction, improving drug delivery in cancer therapy [213]. Also, in this context, Tiwari et al. reviewed the growing interest in single-and dual-atom catalysts, also known as nanozymes, which exhibit superior catalytic activity compared to conventional nanoparticles [214]. These nanozymes, mimicking natural enzymes, are particularly valuable in cancer therapy due to their ability to generate ROS and induce ferroptosis. ...

Reference:

Therapeutic Approaches with Iron Oxide Nanoparticles to Induce Ferroptosis and Overcome Radioresistance in Cancers
Materials Containing Single‐, Di‐, Tri‐, and Multi‐Metal Atoms Bonded to C, N, S, P, B, and O Species as Advanced Catalysts for Energy, Sensor, and Biomedical Applications

... In addition to incorporating nanomaterials into the EGs, another approach to increase its functionality is to include biological elements, such as enzymes. This new category of materials, denoted as eutectozymes, has been reported in two recent works in which authors describe the potential opportunities that this combination would offer, resulting in functional materials with unique properties which could show plain benefits compared to traditional hydrogels [9,26]. However, despite these potential advantages, to our knowledge no study has yet been conducted in which an enzyme has been incorporated into an eutectogel and its activity has been tested. ...

Eutectogels as Promising Materials in Biocatalysis

... In recent years, nanotechnology has opened new avenues for the treatment of human diseases, particularly cancer, and has shown potential in reducing tumorigenesis, enhancing the efficacy of current cancer diagnostic and therapeutic methods, and preventing therapy resistance [20][21][22][23][24]. Carbon-based nanoparticles (CBNs) have emerged as significant players in biomedicine due to their ability to transport therapeutic compounds and examine cells and tissues. ...

Functionalized porphysomes and porphyrin-based nanomaterials for cancer therapy
  • Citing Chapter
  • January 2024

... This modification can facilitate their strategic localization within the multilayer system through electrostatic interactions. [30,31] Hence, both nanozymes, that is, Mn 3 O 4 nanoparticles, and enzyme-polymer hybrids, that is, glucose oxidase (GOx) and horseradish peroxidase (HRP)-loaded SENs, will be explored as catalytically active building blocks as alternatives to traditional polyelectrolytes used in LbL strategy, namely poly(allylamine hydrochloride) (PAH) and poly(sodium-p-styrene sulfonate) (PSS) (see Scheme 1). The catalytic characterization of the systems will provide new insights into the advantages of compartmentalized architecture. ...

Engineered Metal‐Loaded Biohybrids to Promote the Attachment and Electron‐Shuttling between Enzymes and Carbon Electrodes

... In addition to idiographic substances, the detection/visualization of environmental variation, specific interaction, and essential process is also an important aspect [98,99]. Moreover, through proper design, synergistic interactions with boosted therapeutic performances are an interesting research direction [100][101][102][103]. The understanding of Au NCs' potential in treating newly discovered diseases may make the world better [104,105]. ...

Nanozymes with versatile redox capabilities inspired in metalloenzymes

Nanoscale

... Our findings provide compelling evidence of colon microbiota-governed catabolism of PLA-MPs ( 31 ), thus enhancing our understanding of biodegradable plastic breakdown in the gut. Unlike PLA-MPs, petroleum-based plastics are typically inert ( 60 ), but recent studies show that PET, PE, and PVC can be degraded by environmental and insect bacterial strains ( 35 , 36 , 61 ). This implies that both anaerobic and aerobic bacteria may break down both petroleum-based and biodegradable plastics. ...

Microplastics and biobased polymers to combat plastics waste
  • Citing Article
  • August 2023

Chemosphere

... [22] It is important to note that the significant overlap and electron redistribution between the Ti 2p and Ru 3p regions indicate substantial electronic interactions between TM and La-RuO 2 (Figure 4b), which may result in strong metal-support interactions (SMSI). [23] This finding is critical for understanding the catalytic mechanism of La-RuO 2 @TM and suggests that this material could exhibit improved reactivity and stability in catalytic processes. Based on the analysis of the O 1s spectrum presented in Figure S26b, the binding energy positions for lattice oxygen, Ru-OH, oxygen vacancies, and adsorbed H 2 O are observed at 529.2 eV, 529.8 eV, 530.8 eV, and 532.3 eV, respectively. ...

Atomic Layers of Ruthenium Oxide Coupled with Mo2TiC2Tx MXene for Exceptionally High Catalytic Activity Toward Water Oxidation
  • Citing Article
  • July 2023

Applied Catalysis B Environmental

... Chlorpyrifos (CPS) is one of the pesticides widely used in the agricultural field. The CPS has toxic and hazardous effects on human health and the environment [101]. Thus, monitoring of CPS is of great significance. ...

Gold nanoclusters supported Molybdenum diselenide-porous carbon composite as an efficient electrocatalyst for selective ultrafast probing of chlorpyrifos-pesticide
  • Citing Article
  • July 2023

Chemical Engineering Journal

... The increasing awareness of the potential applications of ionic liquids (ILs) in polymer composites has primarily driven the growing interest with a concomitant emphasis on the dispersion of MWCNTs into various polymers [33]. ILs are the preferred candidates to enhance the biological and mechanical properties of composites by achieving the homogenous dispersion of MWCNTs into polymer matrices due to their exceptional thermal stability, high solvation interactions, and extremely low vapor pressure [34,35]. In particular, it has been suggested that ILs with different alkyl chain lengths containing hydrogen sulfate/acetate-based anions and imidazolium-based cations are cost-effective and non-toxic [36][37][38]. ...

Deep eutectic solvents induced changes on the phase transition behavior of smart polymers: A sustainable future approach
  • Citing Article
  • August 2023

Physical Chemistry Chemical Physics

... Thus, the C 1 s peak is further fitted and investigated. As shown in Fig. 4b, two peaks are observed at 282.58 eV ) and 283.52 eV (Ezhil Vilian et al. 2023) in the high resolution of C 1 s curve of LA-MXene, which are corresponding to the C-C/C-Ti and C-Ti bonding. These findings indicated a proper deposition of MXene layer together with the carbon from the LA. ...

Palladium nanoparticles anchored MoS2-MXene composite modified electrode for rapid sensing of toxic bisphenol A in aqueous media
  • Citing Article
  • June 2023

Chemical Engineering Journal