Jonathan M. Jeschke’s research while affiliated with Freie Universität Berlin and other places

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Publications (273)


of survey and data analysis methods. Green boxes represent model input data, grey boxes represent surveyed information which was not used in models, and blue boxes represent sources of information/tools used.
Locations of the European botanical gardens used for surveys of herbivory in native and non‐native plants.
The number of observations (Obs.) made in each garden compared to the number of species surveyed split into native and non‐native species. Note different y‐axis scales for each garden.
Effect sizes of MCMCglmms for 15 botanical garden surveys comparing herbivory levels on (a) native and non‐native plant species and (b) native and non‐native plant species [split into non‐naturalised (blue) and naturalised (red)]; ± 95% credible interval (CI). Prague did not contain any naturalised species. Overall means in bold show mean effect sizes across all gardens ± 95% CI: (a) non‐native species herbivory (pMCMC = 0.005, CI did not cross 0); (b) non‐naturalised species herbivory (pMCMC = 0.001; CI did not cross 0) and naturalised species herbivory (pMCMC = 0.08; CI crossed 0). Mean effect sizes were calculated using a meta‐analysis with MCMCglmm. Negative effect indicates lower herbivory levels on non‐native species and positive effect indicates higher herbivory levels on non‐native species. Gardens are listed by latitude from most northern (Trondheim) to most southern (Bern).
Non‐Native, Non‐Naturalised Plants Suffer Less Herbivory Than Native Plants Across European Botanical Gardens
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October 2024

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Aim The enemy release hypothesis states that the invasion success of non‐native species is partly due to their escape from natural enemies, e.g., herbivores. Large‐scale studies of herbivory using multiple species across multiple sites are needed to test the generality of herbivory release in non‐native plants. Location Europe. Methods We carried out leaf‐herbivory surveys from 2007 to 2021 in 15 botanical gardens ranging in latitude from 47°N (Switzerland) to 63°N (Norway) to investigate how herbivory levels differed between (i) native and non‐native species, and (ii) native and non‐naturalised or naturalised species. Results Overall, we found that herbivory levels were lower on non‐native than native species. In addition, we found that non‐naturalised plants suffered less herbivory than natives and that naturalised plants showed similar levels of herbivory to native plants. Main Conclusions We find broad support for lower herbivory of non‐native plant species compared to natives. However, the stronger reduction in herbivory for non‐naturalised plants suggests that herbivore release may be transient and less pronounced for naturalised non‐native species that have become abundant and integrated into resident communities. This has implications for the management of naturalised non‐native plants, which are performing well in their non‐native ranges despite suffering comparable herbivory levels to native species.

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Hypothesis Descriptions: Darwin’s Naturalization Hypothesis

October 2024

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120 Reads

In this contribution of the Hypothesis Description series, we provide an overview of one of the longest-standing hypotheses in invasion science: Darwin's naturalization hypothesis. We present a brief summary of past definitions and propose the revised definition “low phylogenetic similarity between non-native species and the recipient community increases invasion success”. This formulation follows the basic form ‘subject – relationship – object’, enabling clarity for future research and computational applications in invasion biology. We also provide formalized definitions for previous formulations of the hypothesis and identify both related and opposite hypotheses to Darwin’s naturalization hypothesis.


A conceptual classification scheme of invasion science

October 2024

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55 Reads

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1 Citation

BioScience

In the era of big data and global biodiversity decline, there is a pressing need to transform data and information into findable and actionable knowledge. We propose a conceptual classification scheme for invasion science that goes beyond hypothesis networks and allows to organize publications and data sets, guide research directions, and identify knowledge gaps. Combining expert knowledge with literature analysis, we identified five major research themes in this field: introduction pathways, invasion success and invasibility, impacts of invasion, managing biological invasions, and meta-invasion science. We divided these themes into 10 broader research questions and linked them to 39 major hypotheses forming the theoretical foundation of invasion science. As artificial intelligence advances, such classification schemes will become important references for organizing scientific information. Our approach can be extended to other research fields, fostering cross-disciplinary connections to leverage the scientific knowledge needed to address Anthropocene challenges.


Code tree and example coding. Code categories species (purple), impacts (yellow) and management (blue) with subcodes and codes. The dots (…) indicate that similar codes follow. The example (grey) shows an interview quote and coding of sentence fragments.
Mammals mentioned in the interviews, displayed as shown in the bottom right as an example. Each panel shows the percentage of interviews in which an animal was mentioned: On the upper right as a percentage value for all 36 interviews together (e.g. 58% for the beaver), and on the bottom for each of the cities (BER = Berlin, HAM = Hamburg, MUC = Munich, CGN = Cologne) and nationwide (GER). The type of impact (i.e. whether and animal was associated with positive, mixed or negative impacts) is shown on the top of each panel.
Impacts of urban wildlife as stated by urban wildlife professionals interviewed, grouped into the eight most frequently mentioned negative and positive categories. The width of each box shows the percentage of interviews that mention an impact, and animal silhouettes indicate that the particular animal was associated with that impact by more than 10% of the interviewees; if empty, the impact was in the interview only associated with wildlife in general rather than a particular species.
Examples of quotes by the interviewed urban wildlife professionals on management methods focusing on: Public outreach (environmental education and awareness raising), urban planning and population control. The figure shows all measures that were mentioned in more than 10% of the interviews within the three management categories.
The frequent five: Wild boars, martens, foxes, beavers and raccoons. Negative (red) and positive (green) impacts related to mammal species (orange) and their management (blue arrows) by urban wildlife professionals (purple).
The frequent five: Insights from interviews with urban wildlife professionals in Germany

July 2024

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350 Reads

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1 Citation

Wildlife in cities divides people, with some animals bringing positive benefits and others causing conflict, for example due to property damage. Urban wildlife professionals from municipal administration, nature conservation, and hunting associations have a crucial role in shaping human‐wildlife relationships in cities and fostering conflict‐free coexistence. While many studies on urban wildlife have focused on the views of citizens, few have investigated the perspectives of experts to date. To address this knowledge gap, we interviewed 36 urban wildlife professionals giving guidance in the context of urban wildlife management, either in one of the four largest German cities by population (Berlin, Hamburg, Munich and Cologne) or at the national level. Red foxes, wild boars, raccoons, stone martens and Eurasian beavers were the five mammal species most frequently highlighted in interviews to cause human‐wildlife conflicts. The interviewees saw wild boars and raccoons as the most controversial urban wild mammals but emphasized the need to create refuges for beavers and better inform the public about foxes. Management in terms of public outreach, urban planning and population control, as well as establishing official contact points and stricter fines of activities violating regulations were highlighted as important elements of a toolkit to manage urban wildlife conflicts. Read the free Plain Language Summary for this article on the Journal blog.


For a study of the conservation value of cemeteries relative to other types of urban green spaces at site and city levels: (a) number of taxa, sites, cities, and countries included by taxonomic group (plants, animals, fungi, and all combined) included; (b) sample sizes by taxonomic group; and (c) sample sizes by site type.
The proportion of (a) native species at site level, (b) native species at city level, and (c) unique species at the city level (all representing raw data, not accounting for differences across taxa or cities) for animals (red) and plants (turquoise) in each site type (horizontal lines, median; bar ends, interquartile range [IQR] [i.e., middle 50% of data]; whiskers, range within 1.5 IQR from the quartiles; points, outliers).
Assessing the conservation value of cemeteries to urban biota worldwide

July 2024

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186 Reads

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1 Citation

Cemeteries are key urban green spaces with multifaceted societal and ecological importance. Their biodiversity is shaped by unique environmental and cultural factors. They can potentially protect rare and endangered species, yet their conservation value compared with other urban green spaces remains largely unexplored. We sought to fill this gap by systematically reviewing literature to investigate the conservation value of cemeteries relative to other urban green spaces (botanical gardens, institutional premises, natural remnants, and parks) by comparing species richness and proportions of native and unique species. We analyzed data from 70 papers covering 50 cities in 27 countries with linear and binomial mixed‐effects models at both site and city level. Cemetery conservation value was similar to urban parks, except for the proportion of unique species, for which parks had significantly higher proportions (21.9% vs. 14.2%, p < 0.001). Cemeteries hosted slightly higher proportions of native species at the city level than botanical gardens (99.7% vs. 99.6%, p < 0.001) and institutional green spaces (96.3% vs. 94.1%, p = 0.034) and proportions comparable to parks and natural remnants (p > 0.05). They also had similar or higher values than institutional premises in species richness and unique species proportions (p > 0.05) and a higher site‐level proportion of native species (p < 0.001). In contrast, species richness (slopes = −0.11 and −0.25, respectively) and unique species proportions (4.4% and 6.9%, respectively, p < 0.001 for both) were lower in cemeteries than in remnants of natural areas and in botanical gardens. The conservation value of cemeteries and parks was similar for animals, but parks had a higher value for plants. Overall, cemeteries were generally at least as valuable as some other green spaces for urban biodiversity and mostly native biota. Their religious and cultural significance suggests they will remain intact in the long term; thus, it is essential to prioritize and further promote their biodiversity in conservation and sustainable urban design plans.


Fig. 1. Suggested workflow for developing semi-formal hypothesis statements and clarifying links between general hypotheses and hypothesis statements in scientific texts.
Fig. 2. Three approaches for relating general versions of scientific hypotheses to more specific ones, demonstrated with the example of the Biotic Resistance Hypothesis in invasion biology: (A) decomposition, (B) specification, and (C) operationalization. See the main text for more information.
Natural Language Hypotheses in Scientific Papers and How to Tame Them Suggested Steps for Formalizing Complex Scientific Claims

July 2024

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19 Reads

Hypotheses are critical components of scientific argumentation. Knowing established hypotheses is often a prerequisite for following and contributing to scientific arguments in a research field. In scientific publications, hypotheses are usually presented for specific empirical settings, whereas the related general claim is assumed to be known. Prerequisites for developing argumentation machines for assisting scientific workflows are to account for domain-specific concepts needed to understand established hypotheses, to clarify the relationships between specific hypotheses and general claims, and to take steps towards formalization. Here, we develop a framework for formalizing hypotheses in the research field of invasion biology. We suggest conceiving hypotheses as consisting of three basic building blocks: a subject, an object, and a hypothesized relationship between them. We show how the subject-object-relation pattern can be applied to well-known hypotheses in invasion biology and demonstrate that the contained concepts are quite diverse, mirroring the complexity of the research field. We suggest a step-wise approach for modeling them to be machine-understandable using semantic web ontologies. We use the SuperPattern Ontology to categorize hypothesized relationships. Further, we recommend treating every hypothesis as part of a hierarchical system with 'parents' and 'children'. There are three ways of moving from a higher to a lower level in the hierarchy: (i) specification, (ii) decomposition , and (iii) operationalization. Specification involves exchanging subjects or objects. Decomposition means zooming in and making explicit assumptions about underlying (causal) relationships. Finally, operationalizing a hypothesis means providing concrete descriptions of what will be empirically tested.



Reintroduced, but not accepted: Stakeholder perceptions of beavers in Germany

July 2024

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191 Reads

While reintroductions of regionally extinct native species usually benefit ecosystems, reintroduced animals often struggle to locate appropriate habitats where they can establish themselves without conflict with humans. European beavers (Castor fiber) were successfully reintroduced to Germany almost 60 years ago and have reached high abundances again. As beavers can damage trees and change landscapes, they are increasingly in conflict with humans. We investigated human perceptions of beavers in Germany using an online survey, as they are an example of a reintroduced species with an expanding population and potential conflicts with humans. We asked participants about their emotions (anger, fear, interest, joy) towards beavers and what they consider to be acceptable beaver habitats. Of nearly 1500 survey participants, 803 (53%) were from the general public, 475 (32%) from the agricultural sector and 219 (15%) from forestry. People in these sectors had very different perspectives: beavers were positively perceived by the general public, but negatively by stakeholders working in agriculture and forestry. Independently of stakeholder groups, we also found regional differences, as participants from Bavaria—the German state with the highest beaver densities—viewed beavers more negatively than those from the rest of Germany. Zoos and wildlife parks, as well as urban and nature conservation areas, were considered to be the most acceptable habitats for beavers, whereas survey participants did not accept private gardens and cultivated areas as beaver habitats. We discuss the sources of negative emotions towards beavers and how ecologically suitable habitats differ from those that appear acceptable by humans. Even 60 years after their reintroduction, beavers in Germany are still being recognized as both a novelty and a nuisance. Our findings highlight the need for active beaver management and increased public engagement to enable positive coexistence between beavers and humans in Germany. Read the free Plain Language Summary for this article on the Journal blog.


Field assessment of tending and defensive behaviours of the mutualistic ant Lasius niger along an urbanisation gradient in Berlin, Germany. Ant behaviour was first observed undisturbed, at the (1) group level and (2) individual level. In a second phase, we (3) recorded behavioural responses of individual ants targeted by a simulated attack using a needle. Each sampling session on a given plant host determined the unit of observation for the study. Observations were replicated along an urbanisation gradient in Berlin and repeated 4–7 times over a month.
Positive correlation between aphid density and the number of attending ants shown for 3 periods of the field survey (start: 1–11.08.2018; mid: 12–21.08.2018; end: 22.08–1.09.2018). Aphids were counted within an area of the host plant (focal zone) to derive aphid densities (number of individuals/vertical length of the focal zone). Ant numbers are the average number of ants in the focal zone (in decimals, based on 5 counts within 1 min each where ant movement in and out of the zone was monitored). Shown here are the real data and three linear regressions that illustrate the positive interaction between date and numbers of ants and aphids.
Proportion of ants showing aggressive reactions to a simulated attack along the urbanisation gradient. Dots represent partial residuals and lines correspond to the fit of the binomial GLMM. % sealing is the percentage of sealed surfaces in a 500 m buffer around the study sites. The % sealing variable was standardised to fit the model and back‐transformed to produce the figure.
Behavioural changes in the city: The common black garden ant defends aphids more aggressively in urban environments

July 2024

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140 Reads

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1 Citation

Urbanisation alters biodiversity patterns and threatens to disrupt mutualistic interactions. Aside from pollination, however, little is known about how mutualisms change in cities. Our study aimed to assess how urbanisation affects the protective mutualism between ants and aphids, investigating potential behavioural changes in mutualistic ants and their implications for aphids in urban environments. To do so, we studied the protective mutualism between the pink tansy aphid (Metopeurum fuscoviride) and the black garden ant (Lasius niger) along an urbanisation gradient in Berlin, Germany. In nine locations along this gradient, we measured aphid colony dynamics and proxies for parasitism, quantified the investment of ants in tending aphids and conducted behavioural assays to test the aggressiveness of ant responses to a simulated attack on the aphids. We found that aphid colonies flourished and were equally tended by ants across the urbanisation gradient, with a consistent positive density dependence between aphid and ant numbers. However, ants from more urbanised sites responded more aggressively to the simulated attack. Our findings suggest that this protective mutualism is not only maintained in the city, but that ants might even rely more on it and defend it more aggressively, as other food resources may become scarce and more unpredictable with urbanisation. We thereby provide unique insights into this type of mutualism in the city, further diversifying the growing body of work on mutualisms across urbanisation gradients.


Global association between functional and phylogenetic diversities of alien birds on oceanic islands. (a) Spatial variation of FD (Alien FD, colour of the rings) and phylogenetic diversity (Alien PD, size of the rings) of alien birds on the 407 islands. Values of alien FD (b) and alien PD (c) for islands within each region. Only regions with more than 10 islands are shown.
Deviations of functional and phylogenetic diversities from taxonomic diversity on islands. Mean standardized effect sizes (SES) of functional and phylogenetic diversities across all islands separated by region. The points represent the mean SES‐FD and SES‐PD per region, and horizontal and vertical bars represent the standard deviation of SES‐FD and SES‐PD within each region, respectively. Only regions with more than 10 islands are shown. Among the 407 islands, respectively 15 and 100 islands had SES‐FD and SES‐PD below −1.96, which is the threshold for assemblages being significantly more clustered than expected by chance. Three islands had SES‐PD above 1.96, meaning their alien assemblages were significantly more dispersed than expected by chance.
Direct, indirect, and total effects of all explanatory variables on (a) functional diversity (FD; and its associated SES) and (b) phylogenetic diversity (PD, and its associated SES) of alien birds. The zoogeographic region for birds of each island was integrated as a random effect in all relationships. Dots represent standardized mean effects, and error bars depict 95% CIs (shaded colours represent intervals crossing zero). Variable names are coloured following their context: biotic (green), human (blue), and biogeographical (orange).
Schematic path diagram representing causal relationships between the geological, human, and biotic insular context and the alien functional diversity (FD, panel a) and phylogenetic diversity (PD; panel b). Line width is scaled to the absolute value of effects. Standardized R² coefficients are specified in brackets for each endogenous variable. Variable names are coloured following their context: biotic (green), human (blue) and biogeographical (orange). We only represented the effects for variables with a significant total effect on FD or PD. Dashed lines represent variables with a significant total effect (resulting from adding direct and multiple indirect effects through other variables), but no direct or indirect significant effect. All links between endogenous variables are depicted in Figure S7.
The anthropocene biogeography of alien birds on islands: Drivers of their functional and phylogenetic diversities

June 2024

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281 Reads

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1 Citation

Ecology Letters

A branch of island biogeography has emerged to explain alien species diversity in the light of the biogeographic and anthropogenic context, yet overlooking the functional and phylogenetic facets. Evaluating alien and native birds of 407 oceanic islands worldwide, we built structural equation models to assess the direct and indirect influence of biotic, geographic, and anthropogenic contexts on alien functional diversity (FD) and phylogenetic diversity (PD). We found that alien taxonomic richness was the main predictor of both diversities. Anthropogenic factors, including colonization pressure, associated with classic biogeographical variables also strongly influenced alien FD and PD. Specifically, habitat modification and human connectivity markedly drove alien FD, especially when controlled by taxonomic richness, whereas the human population size, gross domestic product, and native PD were crucial at explaining alien PD. Our findings suggest that humans not only shape taxonomic richness but also other facets of alien diversity in a complex way.


Citations (78)


... As deer densities increase, deer commonly damage garden and ornamental plantings Labonte 2003, Urbanek et al. 2013), cause car accidents that are life-threatening to both humans and deer (Huijser et al. 2009), limit the growth and composition of forest understory vegetation (Rooney and Waller 2003), and cause disagreements among residents over how to manage deer (Butfiloski et al. 1997, Messmer et al. 1997b. Although deer-human conflicts exist, many residents still have a positive view of deer with many noting enjoyment or a feeling of connectedness to nature while viewing deer and some considering the presence of deer as an indication of a healthy ecosystem (Stout et al. 1997, West and Parkhurst 2002, Ballantyne 2012, Moesch et al. 2024. ...

Reference:

Strengthening urban deer management with structured decision making
The frequent five: Insights from interviews with urban wildlife professionals in Germany

... Our research at Tikhonov Cemetery further supports these findings, where 79 plant species belonging to 23 families were recorded, significantly exceeding the species diversity in the adjacent area, where only 31 species from 11 families were found. These data indicate that cemeteries can serve as important biodiversity centers even in urban environments, which is consistent with similar international studies [56]. ...

Assessing the conservation value of cemeteries to urban biota worldwide

... Finally, ecological restoration may need to be designed with the recognition that human activities have impacted climate, biochemical cycles and landscape characteristics, making it unlikely to meet targets dictated by historical conditions. As a result, novel approaches to restoration may be necessary (Volpe et al. 2024). In some cases, it may be necessary to consider the creation of novel ecosystems that, while not identical to historical ones, still provide desirable functions, support biodiversity and enhance soil health. ...

Bionovelty and ecological restoration
  • Citing Article
  • April 2024

Restoration Ecology

... For example, most ants are central-place foragers and their foraging efficiency is influenced by the distance between their stationary nest and the food source (Devigne & Detrain 2006). Though many ant species have adapted to the ecological conditions in urban areas (Brassard & al. 2021), the potential nutritional deficiencies in this habitat type (Gaber & al. 2024) might nevertheless influence individual survival or brood development and consequently affect colony growth. ...

Behavioural changes in the city: The common black garden ant defends aphids more aggressively in urban environments

... Likewise, phylogenetic diversity played an important function in emphasizing on overall biodiversity protection and understanding the driving factors and spatial patterns of community assembly in ecology and biogeography (Kling et al., 2018;Saladin et al., 2019). Therefore, there has been a growing emphasis on the use of functional diversity (FD) and phylogenetic diversity (PD) as proxy to assess assemblage structures and make the framework of biodiversity conservation (Marino et al., 2024;Mazel et al., 2017;Montaño-Centellas et al., 2022;Monnet et al., 2014). ...

The anthropocene biogeography of alien birds on islands: Drivers of their functional and phylogenetic diversities

Ecology Letters

... To assist in this prioritization process, we have provided risk tables and maps for all the current and prospective terrestrial and aquatic priorities in the Union List that can be used to ensure the protection of key ecosystem services, regardless of the underlying biodiversity. This spatially explicit information is fundamental to support the EU strategy for the future management of biological invasions recently proposed by Roura-Pascual et al. 42 . Ultimately, our findings can contribute to the 2030 Biodiversity Strategy that seeks to restore Europe's biodiversity for the benefit of people, climate and the planet. ...

A scenario‐guided strategy for the future management of biological invasions

... For the second pathway, we developed a scheme for a new publication type -Hypothesis Descriptions [30]. Such Hypothesis Descriptions are aimed at formalizing how invasion biology hypotheses are described (especially in terms of which concepts and relationships they cover) and how differences between hypothesis variants can be expressed, both for humans and in a machine-actionable fashion. ...

Hypothesis Description: Enemy Release Hypothesis

... Due to the significant conservation problems faced by the species, it has been included in different legal protection documents since the first document approved at national level [38]. Also, due to its traditional use, the species is locally very well-known and, together with the conservation issues, has become a clear example of a flagship species [39]. ...

Flagship events and biodiversity conservation
  • Citing Article
  • December 2023

... We rediscovered N. peruviana 116-117 years after it was last collected and N. bagrecito 42 years after it was last collected, exemplifying the necessity of fieldwork when searching for 'lost' and missing species. A variety of reasons may explain amphibian rediscoveries [43], including hypothesized recoveries following disease-driven declines [44], but our rediscoveries espouse a trend common to many tropical, small, and endemic species of rediscovered amphibians [45]. Specifically, both N. peruviana and N. bagrecito are minute, inconspicuous inhabitants of the leaf litter or terrestrial moss layer and only known from their type localities, which in the case of N. peruviana is quite remote. ...

What factors influence the rediscovery of lost tetrapod species?

Global Change Biology

... The potential environmental impacts of the species were evaluated in accordance with the EICAT-IUCN guidelines for each of the 12 mechanisms of impact (Volery et al. 2020, Kumschick et al. 2024. The severity of the impact was scored on a scale ranging from minimal concern (MC), minor (MN), moderate (MO), major (MR) to massive (MV) (Kumschick et al. 2024). ...

Using the IUCN Environmental Impact Classification for Alien Taxa to inform decision-making