Jie Tian’s research while affiliated with University of Science and Technology of China and other places

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Publications (806)


TripleSurv: Triplet Time-Adaptive Coordinate Learning Approach for Survival Analysis
  • Article

December 2024

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10 Reads

IEEE Transactions on Knowledge and Data Engineering

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Lianzhen Zhong

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Fan Yang

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[...]

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Jie Tian

A core challenge in survival analysis is to model the distribution of time-to-event data, where the event of interest may be a death, failure, or occurrence of a specific event. Previous studies have showed that ranking and maximum likelihood estimation loss functions are widely-used learning approaches for survival analysis. However, ranking loss only focus on the ranking of survival time and does not consider potential effect of samplesâ exact survival time values. Furthermore, the maximum likelihood estimation is unbounded and easily subject to outliers (e.g., censored data), which may cause poor performance of modeling. To handle the complexities of learning process and exploit valuable survival time values, we propose a time-adaptive coordinate loss function, TripleSurv, to achieve adaptive adjustments by introducing the differences in the survival time between sample pairs into the ranking, which can encourage the model to quantitatively rank relative risk of pairs, ultimately enhancing the accuracy of predictions. Most importantly, the TripleSurv is proficient in quantifying the relative risk between samples by ranking ordering of pairs, and consider the time interval as a trade-off to calibrate the robustness of model over sample distribution. Our TripleSurv is evaluated on three real-world survival datasets and a public synthetic dataset. The results show that our method outperforms the state-of-the-art methods and exhibits good model performance and robustness on modeling various sophisticated data distributions with different censor rates. Our code is available at upon acceptance.



The first column is the content image, the second column is the style image, and the rest are the enhanced images (the first row is the biological tissue image, the second row is the mouse image)
The proposed model. CWANet and Decoder are trainable. Encoder is pre-trained VGG-19 [39], and the parameters are fixed. The feature fusion part in (b) is the same as (a), but we have omitted it to save space. ⊕\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\oplus$$\end{document} represents element-wise addition. ⊖\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\ominus$$\end{document} represents element-wise subtraction. iPool and iUpsample represent i-fold pooling and i-fold upsampling (i=2,4,8). Lc\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$L_{c}$$\end{document}, Ls\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$L_{s}$$\end{document}, Lid\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$L_{id}$$\end{document} and Lmhm\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$L_{mhm}$$\end{document} are content loss, style loss, identity loss and multiple high-frequency matching loss respectively
The structure of CWANet. norm is the mean variance normalization at the channel level. cov is the calculation of the covariance. conv is the 1 × 1 convolution. transformation is a range transformation operation. ⊗\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\otimes$$\end{document} is matrix multiplication. ⊙\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\odot$$\end{document} is the element-wise production. ⊕\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\oplus$$\end{document} is the element-wise addition
Sigmoid curves in different value ranges. The horizontal axis is the range of the value. The vertical axis is the obtained Sigmoid(value)
Visualization of multiple high-frequency information. The images in the first column are content image, style image and enhanced image respectively. The corresponding right side is the high-frequency information of content image and enhanced image under different sampling multiples. 2× represents the high-frequency information collection method 2Pool and 2Upsample, and the same applies to 4× and 8×

+6

Universal NIR-II fluorescence image enhancement via covariance weighted attention network
  • Article
  • Publisher preview available

November 2024

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5 Reads

Multimedia Systems

The second near-infrared (NIR-II) fluorescence imaging has become a new imaging mode due to its characteristics of real-time intraoperative imaging. The NIR-IIb window (1500–1700 nm) has stronger light penetration and has a clearer imaging effect than the NIR-IIa window (1000–1300 nm). The molecular probe currently used for human imaging (indocyanine green) can only be used for NIR-IIa window imaging, and there is a lack of effective molecular probes for NIR-IIb imaging. In addition, there are various types of NIR-II fluorescence images, and it is difficult for a single neural network model to enhance multiple types of images. To solve these problems, we design a universal NIR-II fluorescence image enhancement model to transfer the style of NIR-IIb images to NIR-IIa images and improve the quality of fluorescence images. The model is based on an encoder-decoder framework and can process multiple types of NIR-II fluorescence images simultaneously. Specifically, it includes a module for fusion of low-quality and high-quality image feature maps, the covariance weighted attention network (CWANet), which improves the attention mechanism through covariance weight, allowing the model to filter the style features that are irrelevant or detrimental to image structure in the attention mechanism and pay attention to the key content details of the image. Furthermore, we propose a multiple high-frequency matching loss, which matches the high-frequency information of the enhanced image with the NIR-IIa image to further maintain the structure. Extensive experiments demonstrate that our model generates results that exceed state-of-the-art models, with impressive image enhancement effect.

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NeuFG: Neural Fuzzy Geometric Representation for 3D Reconstruction

November 2024

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13 Reads

IEEE Transactions on Fuzzy Systems

3D reconstruction from multi-view images is considered as a longstanding problem in computer vision and graphics. In order to achieve high-fidelity geometry and appearance of 3D scenes, this paper proposes a novel geometric object learning method for multi-view reconstruction with fuzzy set theory . We establish a new neural 3D reconstruction theoretical frame called neural fuzzy geometric representation (NeuFG), which is a special type of implicit representation of geometric scene that only takes value in [0, 1]. NeuFG is essentially a volume image, and thus can be visualized directly with the conventional volume rendering technique. Extensive experiments on two public datasets, i.e., DTU and BlendedMVS, show that our method has the ability of accurately reconstructing complex shapes with vivid geometric details, without the requirement of mask supervision. Both qualitative and quantitative comparisons demonstrate that the proposed method has superior performance over the state-of-the-art neural scene representation methods. The code will be released on GitHub soon.


ContraSurv: Enhancing Prognostic Assessment of Medical Images via Data-Efficient Weakly Supervised Contrastive Learning

October 2024

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24 Reads

IEEE Journal of Biomedical and Health Informatics

Prognostic assessment remains a critical challenge in medical research, often limited by the lack of well-labeled data. In this work, we introduce ContraSurv, a weakly-supervised learning framework based on contrastive learning, designed to enhance prognostic predictions in 3D medical images. ContraSurv utilizes both the self-supervised information inherent in unlabeled data and the weakly-supervised cues present in censored data, refining its capacity to extract prognostic representations. For this purpose, we establish a Vision Transformer architecture optimized for our medical image datasets and introduce novel methodologies for both self-supervised and supervised contrastive learning for prognostic assessment. Additionally, we propose a specialized supervised contrastive loss function and introduce SurvMix, a novel data augmentation technique for survival analysis. Evaluations were conducted across three cancer types and two imaging modalities on three real-world datasets. The results confirmed the enhanced performance of ContraSurv over competing methods, particularly in data with a high censoring rate.


Responsive Magnetic Particle Imaging Tracer: Overcoming “Always‐On” Limitation, Eliminating Interference, and Ensuring Safety in Adaptive Therapy

Magnetic particle imaging (MPI) has emerged as a novel technology utilizing superparamagnetic nanoparticles as tracers, essential for disease diagnosis and treatment guidance in preclinical animal models. Unlike other modalities, MPI provides high sensitivity, deep tissue penetration, and no signal attenuation. However, existing MPI tracers suffer from “always‐on” signals, which complicate organ‐specific imaging and hinder accuracy. To overcome these challenges, we have developed a responsive MPI tracer using pH‐responsive PdFe alloy particles coated with a gatekeeper polymer. This tracer exhibits pH‐sensitive Fe release and modulation of the MPI signal, enabling selective imaging with a higher signal‐to‐noise ratio and intratumoral pH quantification. Notably, this responsive tracer facilitates subtraction‐enhanced MPI imaging, effectively eliminating interference from liver uptake and expanding the scope of abdominal imaging. Additionally, the tracer employs a dual‐function mechanism for adaptive cancer therapy, combining pH‐switchable enzyme‐like catalysis with dual‐key co‐activation of ROS generation, and Pd skeleton that scavenges free radicals to minimize Fe‐related toxicity. This advancement promises to significantly expand MPI's applicability in diagnostics and therapeutic monitoring, marking a leap forward in imaging technology.



Citations (55)


... However, our focus remains on the most relevant literature, and by using WOSCC, we ensure a broad yet focused review of the available studies. Limiting the search to a single sub-database, such as SCI-EXPANDED, might exclude some pertinent studies, which is why we considered the full range of sub-databases within WOSCC [3]. ...

Reference:

Research on the global trends of COVID-19 associated acute kidney injury: an updated bibliometric analysis
Mapping the evolution of 3D printing in cardio-thoracic diseases: a global bibliometric analysis
  • Citing Article
  • October 2024

International Journal of Surgery

... [91] G4-FA local delivery of siRNA against vascular endothelial growth factor A (siVEGFA) [92] RGD-PAMAM G1 Prevents restenosis. [93] EGCg-Au NPs proliferation and migration of human smooth muscle cells (SMCs) and endothelial cells (ECs) [94] FN-Au NPs promoted mesenchymal stem cell proliferation and increased biocompatibility [ anti-CD34-IONPs Demonstrated the feasibility of EPC adhesion on an iron stent for rapid endothelialization [100] IONPs@PEG-ICG-EPCs Targeted mitigation of neointimal hyperplasia [101] PEGylated Cu-doped MSNs Significantly reduced arterial stenosis, plaque burden, and macrophage infiltration due to codelivery of Cu ions and IL-1Ra [102] CD9-HA-MSNPs targeted delivery of anti-senescence drug rosuvastatin [103] ...

Targeted mitigation of neointimal hyperplasia via magnetic field-directed localization of superparamagnetic iron oxide nanoparticle-labeled endothelial progenitor cells following carotid balloon catheter injury in rats
  • Citing Article
  • June 2024

Biomedicine & Pharmacotherapy

... Near-infrared (NIR) fluorescence imaging is an optical imaging method in which an NIR camera is used to capture the fluorescence signals generated by the excitation of targets. NIR imaging has become one of the most popular intraoperative guidance techniques widely used in surgical procedures such as sentinel lymph node visualization, tumour resection, angiography, and intraoperative dissection 103 . The bedside fluorescence imaging of CA-IX during surgery can enhance the detection and removal of primary and locally metastatic ccRCC. ...

NIR-II light in clinical oncology: opportunities and challenges
  • Citing Article
  • May 2024

Nature Reviews Clinical Oncology

... The absence of biological interpretability in the model leads to our inability to intuitively understand the mechanisms behind the predictions. Although some previous studies [32][33][34][35][36] have utilized transcriptomic data to decipher the biological functions of radiomic features; yet, compared to other omics data such as transcriptomics and proteomics, pathological data is biologically closer to imaging data, may suggesting potentially stronger correlations between them. Moreover, pathological images contain rich information regarding biological behavior of tumors, with robust evidence showing that nuclear heterogeneity is closely linked to tumor prognosis [37]. ...

Radiomic signatures associated with tumor immune heterogeneity predict survival in locally recurrent nasopharyngeal carcinoma
  • Citing Article
  • April 2024

JNCI Journal of the National Cancer Institute

... Because cervical lymph node metastasis of thyroid cancer is usually small and hidden in the early stage, and the symptoms are often not obvious, it is difficult to locate and detect in time 4 accurately. Although traditional medical diagnostic methods (such as ultrasound, CT, MRI, etc.) play a certain role in diagnosing cervical lymph node metastasis of thyroid cancer, they have limitations in detecting micro-metastasis, and the diagnostic accuracy is usually between 60 and 80%. ...

Cervical lymph node metastasis prediction from papillary thyroid carcinoma US videos: a prospective multicenter study

BMC Medicine

... Studies have suggested that impaired liver development is associated with an increased risk of fetal loss or miscarriage. 38 These conditions often involve defects in bile duct formation, hepatic vasculature, or hepatobiliary development, which can compromise liver function and disrupt essential metabolic processes crucial for fetal growth and development. It could be hypothesized that a highhistidine diet might impair embryonic liver development, thus resulting in fetal loss. ...

Improving prediction of treatment response and prognosis in colorectal cancer with AI-based medical image analysis
  • Citing Article
  • January 2024

The Innovation Medicine

... Consequently, the robustness and effectiveness of the methods are not optimal, and the details of the reconstructed image are not well maintained. In addition, more recent studies have investigated methods to enhance the quality of image reconstruction from the system matrix generation (Li et al 2024). However, these methods lack robustness to different noise levels. ...

Modified Jiles–Atherton Model-Based System Matrix Generation Method for Magnetic Particle Imaging
  • Citing Article
  • January 2024

IEEE Transactions on Instrumentation and Measurement

... Traditionally, treatment involves limb-sparing surgery and multiagent or neoadjuvant chemotherapy. Radiotherapy and chemotherapy, alongside autologous bone grafting for bone defects, constitute the treatment foundation [54,55]. However, surgery can not eliminate all residual osteosarcoma cells, leading to recurrence due to the cancer's proliferative, invasive, and metastatic traits. ...

Intraoperative Resection Guidance and Rapid Pathological Diagnosis of Osteosarcoma using B7H3 Targeted Probe under NIR‐II Fluorescence Imaging

... Through animal experiments, gene therapy combined with magnetic fluid hyperthermia has shown promising results in both cellular and animal studies. Lei et al. (2024) developed a high gradient field MPI-MFH method for precise localized heating, which can achieve millimeterscale 3D localization and effective heating of low concentration regions, and validated the method by body model experiments and rat in vivo glioma model experiments, which are shown in Figure 11. The results showed that using MPI (Magnetic Particle Imaging) pixels as a guide for MFH (Magnetic Fluid Hyperthermia) parameters improved the MNP concentration gradient sensitivity to ±1 mg/mL. ...

A Novel Local Magnetic Fluid Hyperthermia Based on High Gradient Field Guided by Magnetic Particle Imaging
  • Citing Article
  • March 2024

IEEE transactions on bio-medical engineering

... Emerging machine learning technologies such as convolutional neural networks are particularly suitable for classification tasks. Our future studies will prioritize data from larger sample sizes and incorporate deep learning applications to further enhance the robustness and performance of our models [65][66][67]. ...

Deep learning model based on primary tumor to predict lymph node status in clinical stage IA lung adenocarcinoma: a multicenter study

Journal of the National Cancer Center