Jérôme Pellet’s research while affiliated with University of Lausanne and other places

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Publications (49)


Optimal time windows to maximize potential species richness in entomological surveys for 3 taxa at 3 altitudinal levels assuming between 1 and 5 surveys each. The mean of the 2003–2022 period is represented with a white dot, the colored bars represent the standard deviation. A single survey aiming at maximizing the potential species richness of butterflies in the lowland (lower left sub-figure) would have to take place between weeks 26 and 30 of the year (first half of July). If two surveys are planned, then they should ideally take place on week 23 (early June ±1 week) and on week 28 (mid-July ±2 weeks).
Planning insect surveys in alpine ecosystems
  • Article
  • Full-text available

October 2023

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24 Reads

Alpine Entomology

Jérôme Pellet

Most biological survey programs rely on multi-species inventories (e.g. birds, amphibians, butterflies, dragonflies). These programs usually rely on multiple visits during pre-defined time windows. The implicit goal of this popular approach is to maximize the observed species richness. Here, we present a novel method to optimize the timing of survey windows using a framework maximizing the detectable species pool. We present a proof of concept using 20 years of entomological records in Switzerland using butterflies, dragonflies, and grasshoppers. The general framework presented can potentially be applied to a wide range of biological survey schemes. It offers a new practical tool for adaptive entomological monitoring under climate change.

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Map of the distribution of sampling ponds (red dots) in the canton of Vaud, Switzerland. The green, black, gray, and white colors represent the forest, building footprint, other surfaces, and undefined surfaces, according to the swissTLM3D geodata provided by the Federal Office of Topography swisstopo, respectively.
Conceptual structural equation models (A) as well as final path analyses for direct and indirect effects of environmental conditions on mosquito presence (B) and mosquito abundance and community composition (C). Blue and red arrows represent positive and negative relationships, respectively. Each path is labeled with its corresponding standardized coefficient. Solid and dashed arrows represent significant and nonsignificant relationships, respectively. ns, not significant; *p ≤ 0.05; **p ≤ 0.01.
Amphibian abundance is associated with reduced mosquito presence in human‐modified landscapes

March 2023

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280 Reads

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3 Citations

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Jérôme Pellet

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Ludovic Bergonzoli

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Abstract The impacts of landscape anthropization on mosquito abundance and diversity are already well studied, but the underlying ecological factors behind these effects are still poorly understood. One such underlying ecological factor may be related to the loss of amphibians in human‐modified landscapes, providing ideal habitats for several mosquito species. In this study, we conducted a mosquito and amphibian larvae survey in 77 ponds along a gradient of landscape anthropization in western Switzerland. We used structural equation models to investigate the direct and indirect effects of building footprints and several local pond parameters on mosquito abundance and composition through amphibian abundance. We highlighted that landscape anthropization increases the presence probability of mosquito larvae and the proportion of Culex pipiens in mosquito communities. Our results also suggested that one of the ecological mechanisms underlying these effects is a reduction in amphibian abundance, limiting competition and predation experienced by mosquitoes in human‐modified landscapes. In addition, we showed that several local pond characteristics prevent the presence and abundance of mosquito larvae. Indeed, deep ponds, which promote amphibian abundance, limit the probability of larval mosquito presence, and large and old ponds have a lower larval mosquito abundance. Amphibians appear to be effective control agents of natural mosquito populations. Therefore, the development of measures to protect amphibians in human‐modified landscapes could help to reduce both mosquito‐related nuisances and the risk of emergence of vector‐borne diseases in humans and wildlife.


Where Land and Water Meet: Making Amphibian Breeding Sites Attractive for Amphibians

October 2022

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348 Reads

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9 Citations

Diversity

The protection of wetlands is a cornerstone in the conservation of pond-breeding amphibians. Because protected wetlands are rarely natural areas, but are often man-made, at least in Europe, it is important that they are well managed to fulfill their intended function. Appropriate management requires knowledge of the ecology of the species, particularly habitat requirements. Here, we combine species monitoring data and habitat mapping data in an analysis where our goal was to describe the factors that determine the occupancy of amphibian species in federally protected amphibian breeding sites. As expected, every species had its own habitat requirements, often a combination of both a terrestrial and aquatic habitat (i.e., landscape complementation). In most species, occupancy was strongly positively affected with the amount of aquatic habitat, but predicted occupancy probabilities were low because the amount of aquatic habitat was low in most sites. The area or proportion of ruderal vegetation also had positive effects on multiple species, while other types of terrestrial habitat (e.g., meadows) led to low occupancy probabilities. The total area of the protected breeding sites was never included in a final model and connectivity was important only for one species (Triturus cristatus). The latter finding implies that the quality of the landscape between breeding sizes is more important than distance per se, while the former implies that the area of some specific habitats within breeding sites is crucial for high occupancies. Thus, increasing the amount of aquatic habitats and likewise terrestrial habitats within protected areas would make them more likely to achieve their conservation objectives. Our study is an example of how the joint analysis of monitoring data and habitat data (based on mapping in the field) can lead to evidence-based suggestions on how to improve conservation practice.


Improving longitudinal habitat connectivity in major river restoration projects through farmland re-allocation

September 2021

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92 Reads

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5 Citations

Journal for Nature Conservation

River restoration projects are often accompanied by major land consolidation operations, notably the reallocation of adjacent farmland, which offers the opportunity to create an extensively-managed buffer zone outside the levees where specific habitat features are installed for endangered terrestrial and semi-aquatic biodiversity. Modern, enrivonmentally-friendly land consolidation operations might thus not only contribute to better integrate the newly restored river into the adjacent landscape, but also to reinstate the longitudinal ecological connectivity that crudely lacks along channelized rivers. Based on a theoretical reallocation of agricultural land via land consolidation, we simulated the creation of a longitudinal biodiversity-friendly grassland buffer along a stretch of the Rhône River (SW Switzerland) where a major revitalisation project is under development. We selected a series of focal species depending on a palette of complementary habitat features, and combinations thereof, to be created for reaching these biodiversity targets. Estimations of species-specific habitat patch size requirements as well as dispersal abilities were used to analyse what would be an optimal spatial connectivity for these habitat features. Since such a buffer zone will necessarily stretch along the riverbed, which implies different spatial contraints and consequential planning strategies, we tested two scenarios via a metapopulation model: (i) arranging key habitat features longitudinally or (ii) positioning them in an isotropic context. Simulations showed that differences in metapopulation connectivity between scenarios were negligible at the foreseen scale. We conclude that land consolidation via targeted farmland reallocation could be instrumental to restoring ecological connectivity in major river revitalisation projects. We also provide concrete quantitative values for restoring an optimal ecological buffer along the Rhône that will promote locally endangered biodiversity.


Training future generations to deliver evidence-based conservation and ecosystem management

May 2021

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998 Reads

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8 Citations

1. To be effective, the next generation of conservation practitioners and managers need to be critical thinkers with a deep understanding of how to make evidence-based decisions and of the value of evidence synthesis. 2. If, as educators, we do not make these priorities a core part of what we teach, we are failing to prepare our students to make an effective contribution to conservation practice. 3. To help overcome this problem we have created open access online teaching materials in multiple languages that are stored in Applied Ecology Resources. So far, 117 educators from 23 countries have acknowledged the importance of this and are already teaching or about to teach skills in appraising or using evidence in conservation decision-making. This includes 145 undergraduate, postgraduate or professional development courses. 4. We call for wider teaching of the tools and skills that facilitate evidence-based conservation and also suggest that providing online teaching materials in multiple languages could be beneficial for improving global understanding of other subject areas.


The core skills of evidence‐based conservation. Based on Young et al. (2014)
Training future generations to deliver evidence‐based conservation and ecosystem management

January 2021

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1,292 Reads

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31 Citations

1. To be effective, the next generation of conservation practitioners and managers need to be critical thinkers with a deep understanding of how to make evidence‐based decisions and of the value of evidence synthesis. 2. If, as educators, we do not make these priorities a core part of what we teach, we are failing to prepare our students to make an effective contribution to conservation practice. 3. To help overcome this problem we have created open access online teaching materials in multiple languages that are stored in Applied Ecology Resources. So far, 117 educators from 23 countries have acknowledged the importance of this and are already teaching or about to teach skills in appraising or using evidence in conservation decision‐making. This includes 145 undergraduate, postgraduate or professional development courses. 4. We call for wider teaching of the tools and skills that facilitate evidence‐based conservation and also suggest that providing online teaching materials in multiple languages could be beneficial for improving global understanding of other subject areas.



Les étangs bachés sont-ils depassés?

January 2021

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35 Reads

«Retour à la nature!» C’est ce que souhaiteraient Jean-Jacques Rousseau et de nombreuses personnes, en particulier parmi celles qui sont actives dans la protection de la nature. Une «remarque personnelle» dans le dernier NP Inside nous l’a rappelé: «Arrêt intéressant dans l’optique des nombreux aménagements artificiels, chers, pas intégrés dans le paysage et peu durables, même s’ils visent a priori un but de conservation de la biodiversité (p. ex. étangs à fond bâché).» Nous décrivons ici les raisons pour lesquelles nous considérons que les étangs bâchés sont toujours pertinents.


Bayesian clustering of microsatellite genotypes with STRUCTURE (nuclear) and mitotypes of crested newts from Western Switzerland (green: T. cristatus, red: T. carnifex). The map displays the average STRUCTURE assignments of each population. Natural distributions of the two species, known other introductions of T. carnifex (red crosses), location of the study area (red rectangle) and the reference populations are shown on the top-left frame. Photo credits: Radek Sejkora (T. carnifex) and Andréas Meyer (T. cristatus)
Maximum-likelihood phylogenetic reconstruction of mitochondrial CR haplotypes (green: T. cristatus, red: T. carnifex). For T. carnifex, haplotypes sampled in Western Switzerland are indicated by an asterisk, and their relative frequencies are displayed (pie chart)
Massive genetic introgression in threatened northern crested newts (Triturus cristatus) by an invasive congener (T. carnifex) in Western Switzerland

August 2016

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254 Reads

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26 Citations

Conservation Genetics

Genetic pollution through introgressive hybridization of local species by exotic relatives is a major, yet neglected aspect of biological invasions, particularly in amphibians where human introductions are frequent. In Western Switzerland, crested newts make an interesting case: the Italian species Triturus carnifex was introduced at least a century ago within the range of the native and threatened T. cristatus. To understand the genetic consequences of this introduction and inform wildlife management authorities, we conducted a genetic survey on the remaining northern crested newt populations known in the area, using newly-developed species-diagnostic nuclear (microsatellites) and mitochondrial (control region) DNA markers. We documented massive nuclear introgression by the T. carnifex genome, which has completely replaced T. cristatus in most populations, especially in the Geneva area where the introduction was originally reported. However, many of these individuals retained the ancestral T. cristatus mtDNA, which could be explained by asymmetric introgression between the two species, stemming from demographic and/or selective processes. Analyses of genetic diversity support multiple events of T. carnifex releases, most-likely of proximate North Italian origin. We pinpointed the last indigenous populations in the region and recommend to prioritize their protection. Our study demonstrates the invasive potential of introduced taxa through introgressive hybridization, alerts about the underestimated rate of illegal amphibian translocations, and emphasizes the need for genetic analyses to monitor such invasions.



Citations (38)


... Our method of surveying amphibians (counts on roads) has weaknesses as well as strengths. First, our use of direct counts as a measure of abundance is less robust than are estimates based on mark–recapture or distance sampling (Schmidt and Pellet 2009 ). Counts are influenced by anuran behavior as well as underlying abundance; for example , the arrival of cane toads may have influenced frog counts not only by changing frog numbers, but also because frogs tend to avoid toads (Greenlees et al. 2007; Narayan et al. 2013). ...

Reference:

Frogs in the spotlight: A 16-year survey of native frogs and invasive toads on a floodplain in tropical Australia
Quantifying abundance: counts, detection probabilities, and estimates
  • Citing Chapter
  • September 2009

... Based on Akaike's information criterion, modified for small sample sizes, the best candidate model among all possible combinations of explanatory variables was determined using the "model.sel" function of the R package "MuMIn" (Perrin et al., 2023). Individual effects of predictors in the model were calculated using the 'glmm.hp' ...

Amphibian abundance is associated with reduced mosquito presence in human‐modified landscapes

... shelter wherever they could find it. Adult Natterjack toads were more selective, predominantly using habitats with open, earthy or gravelly substrates and avoiding the grass-dominated BPAs, as expected given their preference for early successional habitats (Sinsch, 2009, Siffert et al., 2022. The avoidance of grass-dominated BPAs by the toads in our study is an important insight. ...

Where Land and Water Meet: Making Amphibian Breeding Sites Attractive for Amphibians

Diversity

... Current scholarly investigations predominantly focus on specific aspects such as polluted soil restoration, degraded forest rehabilitation, mine land reclamation [7,8], and lake water ecological revitalization, often overlooking the holistic nature of ecosystem protection and the systemic approach required for restoration and governance [9][10][11]. To address these shortcomings, recent years have witnessed the emergence of ecological restoration initiatives characterized by regional, comprehensive, and systematic features. ...

Improving longitudinal habitat connectivity in major river restoration projects through farmland re-allocation
  • Citing Article
  • September 2021

Journal for Nature Conservation

... Consequently, conservation has become multifaceted, multidimensional, and time-and communication-dependent, and affects both local and global environments. A growing body of scientific literature (journal articles, books, online material, etc.) suggests that evidencebased approaches to research, policy, and practice can improve our understanding of the environment and help practitioners and managers make better decisions in their conservation efforts (Downey et al. 2021;Salafsky et al. 2019). ...

Training future generations to deliver evidence-based conservation and ecosystem management

... Capacity building (also a solution to Impediments #2, #4, and #6) is required to understand, interpret, and communicate EBM, its technology, methods, and results. One solution is to expand the training options and associated curricula available for EBM 82 and make them widely available. Learning from others is also important, for example, providing formal and informal venues for intentional and transdisciplinary decision-making involving multiple ocean users and researchers 83 . ...

Training future generations to deliver evidence‐based conservation and ecosystem management

... Hybridization between closely-related amphibian species is an increasingly reported threat, due to nonnative, human-mediated translocated individuals (e.g. Arntzen 2001;Meilink et al. 2015) and can lead to the extinction of native populations (Allendorf et al. 2001;Ryan et al. 2009;Dufresnes et al. 2016;Falaschi et al. 2020). ...

Massive genetic introgression in threatened northern crested newts (Triturus cristatus) by an invasive congener (T. carnifex) in Western Switzerland

Conservation Genetics

... In this study we sampled the two remnant metapopulations of the western portion of Switzerland (Dubey et al., 2006): (i) the first lies on the northern shore of the lake of Geneva (LG metapopulation, fig. 1), a region characterised by a very heterogeneous and mixed agricultural and urbanized landscape, and present a low number of occupied ponds (less than 25; Pellet et al., 2002); (ii) the second is located on the southern bank of the lake of Neuchâtel (LN metapopulation), which on the opposite is an uninterrupted landscape of suitable habitats, including marshes and wet meadows, as well as woodland bordering the lake in a continuous way. In the year 2000, 40 calling ponds were detected, totalling several thousand frogs (Pellet and Neet, 2001). ...

The amphibians of the watershed of the Aubonne river (Switzerland): Distribution and habitat analysis
  • Citing Article
  • June 2002

... 1), a region characterised by a very heterogeneous and mixed agricultural and urbanized landscape, and present a low number of occupied ponds (less than 25; Pellet et al., 2002); (ii) the second is located on the southern bank of the lake of Neuchâtel (LN metapopulation), which on the opposite is an uninterrupted landscape of suitable habitats, including marshes and wet meadows, as well as woodland bordering the lake in a continuous way. In the year 2000, 40 calling ponds were detected, totalling several thousand frogs (Pellet and Neet, 2001). This area is considered as one of the largest metapopulation in Switzerland (Grossenbacher, 1988). ...

The European tree frog (Hyla arborea Anura) in the canton de Vaud: Present state of knowledge
  • Citing Article
  • January 2001