Jennifer L. Green’s research while affiliated with Michigan State University and other places

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Publications (6)


Map of 30 sample locations along the Doubs river and smaller tributaries (grey) in eastern France. Background mapping layers provided by Google mapping services.
(Top) Posterior mean latent coordinates of each sample location in the Doubs river data coloured by the posterior modal cluster assignment. Vectors represent factor loadings associated with a subset of commonly observed species: Alburnus alburnus (ALAL), Rutilus rutilus (RURU), Gobio gobio (GOGO), Leuciscus cephalus (LECE), Nemacheilus barbatulus (NEBA), Phoxinus phoxinus (PHPH) and Thymallus thymallus (THTH). (Bottom) Sample locations coloured by posterior modal cluster assignment. The two clusters in the latent space roughly correspond to upstream and downstream sample locations, with the red cluster representing upstream sites and the blue cluster representing downstream sites. Background mapping layers provided by Google mapping services.
(Top) Posterior probability of cluster assignment by sample location. Sample locations one through 16 and 17 through 30 represent downstream and upstream locations, respectively. Sample locations 16, 17 and 18 are geographically located on the transition between upstream and downstream locations, potentially explaining their lower modal cluster probabilities. (Bottom) Pairwise, posterior cluster membership probabilities between sample locations in the Doubs river data. Each cell in this plot represents the posterior probability that the sample locations on the horizontal and vertical axis share a cluster in the latent space.
Satellite map of 28 sample frame locations in Craters of the Moon National Monument and Preserve in Idaho, USA. The interior polygon defines the National Monument and the exterior polygon defines the National Preserve. Sample frames 19, 20, 25, 26, 27, 28 and 35 are located in unique vegetated islands within lava flows called kipukas (coloured in red), and are of particular conservation interest, representing potentially pristine communities not physically disturbed by grazing or other anthropogenic activities (Yeo et al., 2009). Background satellite imagery layers provided by Google mapping services.
(Top) Posterior mean latent coordinates of each sample location in CRMO coloured by the posterior modal cluster assignment. Vectors represent factor loadings associated with a subset of commonly observed species: Allium spp. (ALLSPP), Artemisia tridentata (ARTTRID), Crepis acuminata (CREACU), Elymus elymoides (ELYELY), Ericameria nana (ERINAN), Penstemon spp. (PENSPP) and Poa secunda (POASEC). (Bottom) Sample locations coloured by posterior modal cluster assignment. Cluster one is denoted in red and is comprised of sample frames 19, 20, 26, 27, 32 and 35; cluster two is denoted in blue and is comprised of sample frames 1, 2, 8, 11, 25 and 28; all other sample frames are in cluster three, denoted in gold. Background mapping layers provided by Google mapping services.

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Clustering and unconstrained ordination with Dirichlet process mixture models
  • Article
  • Full-text available

August 2024

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72 Reads

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2 Citations

Christian Stratton

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Andrew Hoegh

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Assessment of similarity in species composition or abundance across sampled locations is a common goal in multi‐species monitoring programs. Existing ordination techniques provide a framework for clustering sample locations based on species composition by projecting high‐dimensional community data into a low‐dimensional, latent ecological gradient representing species composition. However, these techniques require specification of the number of distinct ecological communities present in the latent space, which can be difficult to determine in advance. We develop an ordination model capable of simultaneous clustering and ordination that allows for estimation of the number of clusters present in the latent ecological gradient. This model draws latent coordinates for each sample location from a Dirichlet process mixture model, affording researchers with probabilistic statements about the number of clusters present in the latent ecological gradient. The model is compared to existing methods for simultaneous clustering and ordination via simulation and applied to two empirical datasets; JAGS code to fit the proposed model is provided in an appendix. The first dataset concerns presence‐absence records of fish in the Doubs river in eastern France and the second dataset describes presence‐absence records of plant species in Craters of the Moon National Monument and Preserve (CRMO) in Idaho, USA. Results from both analyses align with existing ecological gradients at each location. Development of the Dirichlet process ordination model provides wildlife managers with data‐driven inferences about the number of distinct communities present across monitored locations, allowing for more cost‐effective monitoring and reliable decision‐making for conservation management.

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Active learning continuum (O’Neal & Pinder-Grove, n.d.) that shares a variety of techniques that can be used for active learning, ordered by complexity and classroom time commitment
Wheel of emotion model (Plutchik, 2001) that uses a color wheel to highlight different types of emotions and position to highlight different levels of emotional intensity
Framework describing how GSIs experience active learning over time
Max’s evolution and breakthroughs (blue arrows) with active learning
Andy’s evolution and breakthroughs (blue arrows) with active learning
Understanding How and When Graduate Student Instructors Break Through Challenges with Active Learning

International Journal of Research in Undergraduate Mathematics Education

Across recommendations for teaching undergraduate mathematics and statistics courses, instructors, including graduate student instructors (GSIs), are encouraged to implement techniques that actively engage students in the material. Despite these recommendations, GSIs’ adoption of active learning techniques remains limited. Research suggests that instructors’ knowledge about and emotions towards using active learning can promote or inhibit their use of active learning in the classroom. However, little is known about how GSIs’ knowledge about and emotions towards using active learning evolve over time. We present findings from a longitudinal case study following two GSIs within a department of mathematical sciences across four semesters and discuss observed breakthroughs regarding their knowledge of, emotions towards, and use of active learning techniques. Data from surveys, interviews, and classroom observations revealed that GSIs’ breakthroughs in their use of active learning only occurred after their increased knowledge about active learning aligned with their emotions towards it. This study further revealed that the GSIs needed to feel confident in and be challenged by their course structure, such as teaching in classrooms more suitable for active learning, before implementing such techniques. From these findings, we provide suggestions for professional development programs and discuss future research practice when investigating GSIs’ longitudinal development as instructors who use active learning techniques in the classroom.


Statistics: Value-Added Models

November 2022

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16 Reads

An ongoing concern for researchers, policy makers, and educators is the contribution to student achievement of educational inputs such as individual schools and teachers, interventions, teaching practices, and school policies. Value-added modeling estimates such effects from longitudinal student achievement data. This article provides an overview of Value-Added Models (VAMs) by describing representative examples of econometric, statistical, and alternative approaches and their essential features. It also discusses the concerns that value-added modeling estimates may be biased or lack sufficient stability and precision to support desired inferences.


Descriptive statistics

November 2022

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378 Reads

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17 Citations

Descriptive statistics are used to summarize and explore characteristics of data. In this entry, we provide an overview of commonly used descriptive statistics for categorical and numerical data and how they are interpreted in summaries and analyses. We also present a practical example of how descriptive statistics may be used and interpreted in an educational context.


Figure 1. The STEW lesson plan template with some prompts for annotated lesson notes highlighted.
Figure 2. Examples of annotated lesson notes (written in blue italicized front) from a lesson plan on margin of error.
Figure 3. A summary of how teachers' instructional actions compared (i.e., aligned, varied, and adapted) to annotated lesson notes (ALNs) which prescribed actions that could be observed during each lesson's implementation.
Figure 4. A dot plot Robin made from her class's data.
A classroom conversation that occurred in Robin's class about the meaning of "one dot" in a sampling distribution.
Exploring the Use of Statistics Curricula with Annotated Lesson Notes

August 2022

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313 Reads

Journal of Statistics and Data Science Education

In K–12 statistics education, there is a call to integrate statistics content standards throughout a mathematics curriculum and to teach these standards from a data analytic perspective. Annotated lesson notes within a lesson plan are a freely available resource to provide teachers support when navigating potentially unfamiliar statistics content and teaching practices. We identified several types of annotated lesson notes, created two statistics lesson plans that contained various annotated lesson notes, and observed secondary mathematics teachers implement the lesson plans in their intermediate algebra courses. For this study, we qualitatively investigated how two teachers’ instructional actions compared to what was prescribed in the annotated lesson notes. We found ways in which the teachers’ instructional actions, across their differing contexts, aligned with, varied from, or adapted to the annotated lesson notes. From these results, we highlight affordances and limitations of annotated lesson notes for statistics instruction and offer recommendations for those who create statistics curricula with annotated lesson notes.


Citations (3)


... GLLVMs (Skrondal and Rabe-Hesketh, 2004) are popular in ecology for both ordina-5 tion and joint species distribution modeling (JSDM) (Niku et al., 2019;Ovaskainen et al., 2017;Tikhonov et al., 2020). Hui (2017); Stratton et al. (2024) use Gaussian mixtures for site scores to infer clusters in an unconstrained ordination approach. To unite advantages of constrained and unconstrained ordination, van der Veen et al. (2023) model site scores as stochastic functions of covariates within a GLLVM, an approach they term concurrent ordination. ...

Reference:

Inferring latent structure in ecological communities via barcodes
Clustering and unconstrained ordination with Dirichlet process mixture models

... Descriptive statistics are characterized by a set of measures, including the mean, median, and standard deviation, which provide informative insights into the responses given by respondents. Descriptive statistics form a basis for all quantitative analysis and are a precursor for inferential statistics, which uses properties of a data set to make inference and predictions beyond the data (Green et al., 2022). The descriptive statistics table is as follows: According to Table 2, there are a total of 26 indicators across the four variables. ...

Descriptive statistics
  • Citing Chapter
  • November 2022

... Satyahadewi & Perdana (2021) present and discuss the use of Shiny/R for the comparison of means. Stratton et al. (2021) present an application based on Shiny focused on teaching sampling distributions and properties of estimators. Von Borries & De Castro (2022) show the roc_app application that helps students understand the Receiver Operating Characteristic (ROC) curve, as well as other concepts associated with binary classification models. ...

Not just normal: Exploring power with Shiny apps
  • Citing Article
  • April 2021

Technology Innovations in Statistics Education