Jean-Pierre Changeux’s research while affiliated with University of California, San Diego and other places

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Publications (42)


Consciousness : from molecular to social scales
  • Preprint

October 2024

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9 Reads

Jean-Pierre Changeux

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In this interview, Guillaume Dumas reaches out to Jean-Pierre Changeux to offer a wide-ranging view on consciousness, spanning over its fundamental molecular mechanisms up to its social dimension. They further discuss the exploration of altered states of consciousness and its relation to artistic practice. They finally tackle the opportunities of some of the prominent fields of future research such as artificial intelligence and highlight the importance of multidisciplinary research in advancing the study of consciousness.


Human Cultural Evolution Outpaces Biological Evolution: A Brain Connectomic Approach

July 2024

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7 Reads

The Evolutionary Roots of Human Brain Diseases takes an innovative approach and assembles recent findings ranging from evolutionary biology and anthropology to clinical neurosciences, all showing the price on health of human brain evolution. Written by experts in their field, the chapters explore the tenet that extensive human brain development during evolution has given rise to exclusively human brain diseases, both priming and impacting their clinical expression. There are presentations on cerebral cellular specificities or human-specific network developments, detailed discussions of neurological or psychiatric diseases with an evolutionary focus, and chapters exploring evolutionarily grounded medication developments as well as cultural and societal repercussions. Evolutionary concepts ranging from genetic pleiotropic antagonism to disease remnants of ancient behaviors crucial for survival are presented. The horizon is extended to include potential repercussions of ongoing human evolution on the human brain when cultural evolution outpaces biological evolution.


Travailler avec François Gros à l’Institut Pasteur : l’allostérie, le récepteur nicotinique et la biologie du futur
  • Article
  • Full-text available

December 2023

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13 Reads

Comptes Rendus Biologies

Working with François Gros was a privileged moment in my scientific life, enabling me to appreciate a scientific personality whose generosity knew no bounds and whose vision of science was far ahead of its time.

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The coming decade of digital brain research — A vision for neuroscience at the intersection of technology and computing

March 2023

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1,804 Reads

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2 Citations

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Changeux, Jean-Pierre

Brain research has in recent years indisputably entered a new epoch, driven by substantial methodological advances and digitally enabled data integration and modeling at multiple scales – from molecules to the whole system. Major advances are emerging at the intersection of neuroscience with technology and computing. This new science of the brain integrates high-quality basic research, systematic data integration across multiple scales, a new culture of large-scale collaboration and translation into applications. A systematic approach, as pioneered in Europe’s Human Brain Project (HBP), will be essential in meeting the pressing medical and technological challenges of the coming decade. The aims of this paper are To develop a concept for the coming decade of digital brain research To discuss it with the research community at large, with the aim of identifying points of convergence and common goals To provide a scientific framework for current and future development of EBRAINS To inform and engage stakeholders, funding organizations and research institutions regarding future digital brain research To identify and address key ethical and societal issues While we do not claim that there is a ‘one size fits all’ approach to addressing these aspects, we are convinced that discussions around the theme of digital brain research will help drive progress in the broader field of neuroscience.


Figure 1. Virtual endocast of DIK-1-1 Australopithecus afarensis (A: superior view: B: posterior view) and endocranial surface of an immature chimpanzee (C: superior view: D: posterior view) (from [17]). Both species display a similar organization of sulci and gyri. C, sulcus centralis; fs, frontalis superior; fm, frontalis medius; fi, frontalis inferior; fo, fronto-orbitalis; h, horizontal ramus of pci; ip, s. intraparietalis; pci, praecentralis inferior; pcs, praecentralis superior; ps, parietalis superior; pti, postcentralis inferior; ptm, postcentralis medius; pts, postcentralis superior; L, s. lunatus; ts, temporalis superior; ts-a, ramus temporalis superior; tm, temporalis medius; occi, occipitalis inferior; lc, s. calcarinus lateralis; u, s. calcarinus ramus superior; cereb, cerebellum; ld, lambdoidal suture. Scale bar is 1 cm.
Figure 2. Left lateral view of endocranial morphology of early Homo (from [19]). Expanding areas are in green, bulging in yellow (IPF, inferior prefrontal cortex; 45/47, Brodmann areas 45/47; PP, posterior parietal cortex; T, temporal lobe, O, occipital lobe, TS, transverse sinus). Brain sulci are in red: fs/fi, superior/inferior frontal; pc/c/pt, precentral/central/postcentral; s, Sylvian; ip, intraparietal.
Figure 2. Vue latérale gauche de la morphologie endocrânienne des Homo anciens (d'après [19]). Les zones en expansion sont en vert, les zones en saillie en jaune (IPF, cortex préfrontal inférieur ; 45/47, zones de Brodmann 45/47 ; PP, cortex pariétal posté-rieur ; T, lobe temporal, O, lobe occipital, TS, sinus transverse). Les sillons cérébraux sont en rouge : fs/fi, frontal supérieur/inférieur ; pc/c/pt, précentral/central/postcentral ; s, sylvien ; ip, intrapariétal.
Figure 3. Left: comparative form analysis (PCA) incorporating a size factor (along PC1) of the endocranial shape of H. erectus, H. neanderthalensis and H. sapiens (from [28]). Successive chronological groups of H. sapiens (numbered 1-3) are represented by purple polygons. Neandertals are represented in red and H. erectus in green. Right: comparison of the endocranial shape of the La Chapelle-aux-Saints Neandertal (in red) with that of a recent H. sapiens (in blue).
Figure 3. A gauche : analyse comparative des formes (ACP) intégrant un facteur de taille (selon PC1) de la forme endocrânienne d'H. erectus, H. neanderthalensis et H. sapiens (d'après [28]). Les groupes chronologiques successifs d' H. sapiens (numérotés de 1 à 3) sont représentés par des polygones violets. Les Néandertaliens sont représentés en rouge et H. erectus en vert. A droite : comparaison de la forme endocrânienne du Néandertalien de La Chapelle-aux-Saints (en rouge) avec celle d'un H. sapiens récent (en bleu).
Paleoanthropology of cognition: an overview on Hominins brain evolution

October 2022

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386 Reads

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11 Citations

Comptes Rendus Biologies

Recent advances in neurobiology, paleontology, and paleogenetics allow us to associate changes in brain size and organization with three main “moments” of increased behavioral complexity and, more speculatively, language development. First, Australopiths display a significant increase in brain size relative to the great apes and an incipient extension of postnatal brain development. However, their cortical organization remains essentially similar to that of apes. Second, over the last 2 My, with two notable exceptions, brain size increases dramatically, partly in relation to changes in body size. Differential enlargements and reorganizations of cortical areas lay the foundation for the “language-ready” brain and cumulative culture of later Homo species. Third, in Homo sapiens, brain size remains fairly stable over the last 300,000 years but an important cerebral reorganization takes place. It affects the frontal and temporal lobes, the parietal areas and the cerebellum and resulted in a more globular shape of the brain. These changes are associated, among others, with an increased development of long-distance—horizontal—connections. A few regulatory genetic events took place in the course of this hominization process with, in particular, enhanced neuronal proliferation and global brain connectivity.


Gradation principle of the cerebral cortex of human and nonhuman animals. (A) Gradation along the caudal to rostral axis in the monkey frontal cortex based on its cytoarchitecture (Vogt & Vogt, 1919) showing a shift of large pyramidal cells from the deep to the upper cortical layers. Note that the very large projection neurons in deep layer V of primary motor cortex, area 4, are not necessarily an indication of the “inside” nature of this area (Barbas & García-Cabezas, 2015; Shipp, 2005). Apart from these Betz cells, providing direct and strong output to the spinal cord, the largest pyramidal neuron bodies in area 4 are located in layer IIIc (García-Cabezas et al., 2020). (B) Cytoarchitecture-based, whole-cortex gradients in two monotremes, ornithorynchus and tachyglossus (Abbie, 1940). (C) Cytoarchitectonic gradients in the human frontal lobe (Sanides, 1970). (D) Myeloarchitectonic gradients in the human cerebral cortex. Visual rendering from Nieuwenhuys and Broere (2017) using observations from Hopf (1955, 1956) and Hopf and Vitzthum (1957). Darker shading indicates stronger myelination.
A multidimensional axis of mammalian and human cortical cytoarchitecture and connectivity. Cortical areas of the human brain are arranged by their cytoarchitectonic spectrum, from dense areas on the outside to more sparsely populated areas on the inside. These cellular densities are well correlated with other macroscopic and microscopic morphological features of cortical areas, such as laminar differentiation, cortical thickness, soma size, and spine density of pyramidal neurons (e.g., Beul & Hilgetag, 2019; John et al., 2021; van den Heuvel et al., 2015); compare Table 1. Moreover, as depicted in the lower panel, the existence or absence of connections is related to the similarity of cellular densities of the areas, as described by the Structural Model of Connections and Architectonic Type Principle (García-Cabezas et al., 2019; Hilgetag et al., 2019), with connections predominantly linking areas of a similar structure type, and the areas on the inside forming a densely connected core. The structural gradient also relates to the laminar organization of projection origins and terminations. Specifically, outside areas project to inside areas predominantly from the supragranular (upper) cortical layers. Conversely, inside areas project to outside areas predominantly from infragranular (deep) cortical layers, while areas of a similar type show a more balanced bilaminar pattern of projection origins. Compared to such arrangements for other mammalian species, such as the mouse and macaque monkey, the human arrangement possesses an expanded cytoarchitectonic gradient, as is apparent in the larger number of concentric circles than in other species (cf. Goulas et al., 2019; Hilgetag et al., 2019). Moreover, it shows a clear cytoarchitectonic differentiation between the core and the periphery of the cortical connectome. Figure adapted from Goulas et al. (2019), Changeux et al. (2021).
A natural cortical axis connecting the outside and inside of the human brain

October 2022

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129 Reads

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25 Citations

What structural and connectivity features of the human brain help to explain the extraordinary human cognitive abilities? We recently proposed a set of relevant connectomic fundamentals, some of which arise from the size scaling of the human brain relative to other primate brains, while others of these fundamentals may be uniquely human. In particular, we suggested that the remarkable increase of the size of the human brain due to its prolonged prenatal development has brought with it an increased sparsification, hierarchical modularization, as well as increased depth and cytoarchitectonic differentiation of brain networks. These characteristic features are complemented by a shift of projection origins to the upper layers of many cortical areas as well as the significantly prolonged postnatal development and plasticity of the upper cortical layers. Another fundamental aspect of cortical organization that has emerged in recent research is the alignment of diverse features of evolution, development, cytoarchitectonics, function, and plasticity along a principal, natural cortical axis from sensory (“outside”) to association (“inside”) areas. Here we highlight how this natural axis is integrated in the characteristic organization of the human brain. In particular, the human brain displays a developmental expansion of outside areas and a stretching of the natural axis such that outside areas are more widely separated from each other and from inside areas than in other species. We outline some functional implications of this characteristic arrangement.


Multilevel development of cognitive abilities in an artificial neural network

September 2022

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117 Reads

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26 Citations

Proceedings of the National Academy of Sciences

Several neuronal mechanisms have been proposed to account for the formation of cognitive abilities through postnatal interactions with the physical and sociocultural environment. Here, we introduce a three-level computational model of information processing and acquisition of cognitive abilities. We propose minimal architectural requirements to build these levels, and how the parameters affect their performance and relationships. The first sensorimotor level handles local nonconscious processing, here during a visual classification task. The second level or cognitive level globally integrates the information from multiple local processors via long-ranged connections and synthesizes it in a global, but still nonconscious, manner. The third and cognitively highest level handles the information globally and consciously. It is based on the global neuronal workspace (GNW) theory and is referred to as the conscious level. We use the trace and delay conditioning tasks to, respectively, challenge the second and third levels. Results first highlight the necessity of epigenesis through the selection and stabilization of synapses at both local and global scales to allow the network to solve the first two tasks. At the global scale, dopamine appears necessary to properly provide credit assignment despite the temporal delay between perception and reward. At the third level, the presence of interneurons becomes necessary to maintain a self-sustained representation within the GNW in the absence of sensory input. Finally, while balanced spontaneous intrinsic activity facilitates epigenesis at both local and global scales, the balanced excitatory/inhibitory ratio increases performance. We discuss the plausibility of the model in both neurodevelopmental and artificial intelligence terms.



Differential mechanisms underlie trace and delay conditioning in Drosophila

March 2022

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294 Reads

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28 Citations

Nature

Two forms of associative learning—delay conditioning and trace conditioning—have been widely investigated in humans and higher-order mammals¹. In delay conditioning, an unconditioned stimulus (for example, an electric shock) is introduced in the final moments of a conditioned stimulus (for example, a tone), with both ending at the same time. In trace conditioning, a ‘trace’ interval separates the conditioned stimulus and the unconditioned stimulus. Trace conditioning therefore relies on maintaining a neural representation of the conditioned stimulus after its termination (hence making distraction possible²), to learn the conditioned stimulus–unconditioned stimulus contingency³; this makes it more cognitively demanding than delay conditioning⁴. Here, by combining virtual-reality behaviour with neurogenetic manipulations and in vivo two-photon brain imaging, we show that visual trace conditioning and delay conditioning in Drosophila mobilize R2 and R4m ring neurons in the ellipsoid body. In trace conditioning, calcium transients during the trace interval show increased oscillations and slower declines over repeated training, and both of these effects are sensitive to distractions. Dopaminergic activity accompanies signal persistence in ring neurons, and this is decreased by distractions solely during trace conditioning. Finally, dopamine D1-like and D2-like receptor signalling in ring neurons have different roles in delay and trace conditioning; dopamine D1-like receptor 1 mediates both forms of conditioning, whereas the dopamine D2-like receptor is involved exclusively in sustaining ring neuron activity during the trace interval of trace conditioning. These observations are similar to those previously reported in mammals during arousal⁵, prefrontal activation⁶ and high-level cognitive learning7,8.


Multilevel Development of Cognitive Abilities in an Artificial Neural Network

January 2022

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194 Reads

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1 Citation

Several neuronal mechanisms have been proposed to account for the formation of cognitive abilities through postnatal interactions with the physical and socio-cultural environment. Here, we introduce a three-level computational model of information processing and acquisition of cognitive abilities. We propose minimal architectural requirements to build these levels and how the parameters affect their performance and relationships. The first sensorimotor level handles local nonconscious processing, here during a visual classification task. The second level or cognitive level globally integrates the information from multiple local processors via long-ranged connections and synthesizes it in a global, but still nonconscious manner. The third and cognitively highest level handles the information globally and consciously. It is based on the Global Neuronal Workspace (GNW) theory and is referred to as conscious level. We use trace and delay conditioning tasks to, respectively, challenge the second and third levels. Results first highlight the necessity of epigenesis through selection and stabilization of synapses at both local and global scales to allow the network to solve the first two tasks. At the global scale, dopamine appears necessary to properly provide credit assignment despite the temporal delay between perception and reward. At the third level, the presence of interneurons becomes necessary to maintain a self-sustained representation within the GNW in the absence of sensory input. Finally, while balanced spontaneous intrinsic activity facilitates epigenesis at both local and global scales, the balanced excitatory-inhibitory ratio increases performance. Finally, we discuss the plausibility of the model in both neurodevelopmental and artificial intelligence terms.


Citations (22)


... Computational modelling approaches provide the possibility of adapting the model for each patient, opening the door to personalized investigations. 210 Such an approach (M3) is particularly promising, given that each DoC patient's lesion is unique. While this individualized approach is still in its infancy, it could result in major steps towards successful treatment of patients with a DoC. ...

Reference:

Brain state identification and neuromodulation to promote recovery of consciousness
The coming decade of digital brain research — A vision for neuroscience at the intersection of technology and computing

... Within this context the hominization of the brain took place on the basis of a few genetic events (still mostly unidentified) without a dramatic reorganization of the genome. Yet these changes have been sufficient for the broadcasting of information among distant thalamocortical regions (i.e., the global neuronal workspace (GNW)) to arise and consciousness to acquire the specific features of the adult human brain (Changeux, Goulas, & Hilgetag, 2021;Hublin & Changeux, 2022). ...

Paleoanthropology of cognition: an overview on Hominins brain evolution

Comptes Rendus Biologies

... The 20 concept of cortical gradients refers to continuous spatial variations in connectomic profiles across the cortex. The brain organizes its 21 connectivity along these gradients, with functional regions smoothly transitioning from one state to another 4 . By modeling these 22 gradients as manifolds, researchers are now able to uncover how different brain regions interact and how they change in response 23 to different cognitive states or behaviors, with implications for linking brain structure with function 5 . ...

A natural cortical axis connecting the outside and inside of the human brain

... However, in trace conditioning, there is an interval (trace interval) between the presentation of the CS and the US, requiring the neural representation of the CS to be maintained until the US is presented for contingency learning to occur. Therefore, trace conditioning is considered more cognitively demanding than delayed conditioning [28,29]. Indeed, it has been shown to involve brain regions associated with higher cognitive functions such as the prefrontal cortex and hippocampus, and persistent activity has been observed in the prefrontal cortex during the trace interval [30][31][32]. ...

Differential mechanisms underlie trace and delay conditioning in Drosophila

Nature

... In essence, the upper lobe shreds were processed with QUIAZOL-chloroform extraction protocol according to manufacturer's instructions. Quantitative RT-qPCR was performed using the primers described by Dias de Melo et al. [34] and the QuantiNova SYBR® Green RT-PCR Kit (Qiagen) according to the manufacturer's guidelines. Cytokine mRNA levels were quantified using serial dilutions of synthetic standards and normalised to the reference gene γ-actin (Fw: ACAGAGAGAAGATGACGCAGATAATG; Rev: GCCTGAATGGCCACGTACA; Probe: FAM-TTGAAACCTTCAACACCCCAGCC-TAMRA). ...

Attenuation of clinical and immunological outcomes during SARS‐CoV‐2 infection by ivermectin

EMBO Molecular Medicine

... 6 Ivermectin has also been used as an anticancer drug and has been used in COVID-19 infection in the recent past. 7,8,9 Though ivermectin generates a low level of toxicity because it is targeted at CNS, it is not recommended to treat young children due to safety concerns. 10 In this case, one younger sibling died of poisoning while the elder sister survived. ...

Ivermectin as a potential treatment for COVID-19?

... The principal axis of receptor density (receptor PC1) represents the primary variation of receptor density [14,49]. Neurotransmitter receptor densities were constructed using open positron emission tomography (PET) tracer images from 1238 healthy participants (520 females) [50]. ...

The natural axis of transmitter receptor distribution in the human cerebral cortex

Proceedings of the National Academy of Sciences

... ; of the scaling properties of the brain. Indeed, due to physical constraints exerted onto the brain (Ringo, 1991), a bigger brain will get bigger only the cost of reducing its overall connectivity, which in turns leads to an increasing modularity of its network (Magrou et al., 2024;Changeux et al., 2021). This effect of scaling the brain up may well be at work here: the macaque and the marmoset 29×29 consensus connectivity matrices in Figure 2 have a similar graph densities, although a 4% drop is already detectable from marmoset (0.72) to macaque (0.68). ...

Feature Article: A Connectomic Hypothesis for the Hominization of the Brain

Cerebral Cortex

... For instance, murine models of atopic dermatitis and allergic asthma showed ivermectin's immunomodulatory and antiinflammatory mechanisms of action 14,15 . In addition, Syrian Golden Hamsters infected with SARS-CoV-2 were injected with subcutaneous ivermectin, showing a reduction in the IL-6/IL-10 ratio in lung tissues and preventing pathological deterioration 16 . Also, ivermectin appeared to be more active in females than in males, showing a lower impact on viral titers in the lungs or nasal turbinates, and favoring a mecha-nism of action related to anti-inflammatory/immunomodulatory effects rather than a direct antiviral activity 16 , as was proposed by other authors 17 . ...

Anti-COVID-19 efficacy of ivermectin in the golden hamster