Innes C. Cuthill’s research while affiliated with University of Bristol and other places

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Publications (314)


Figure 1. Study subject and experimental setup. (a) White-fronted plover chick released after participating in a behavioural trial in a (b) Y-maze in the wild in Madagascar. Photos by Marc Gilles.
Figure 2. Schematic representation of the Y-maze (a) in 3D and (b) from above. The semi-transparent ceiling and one opaque wall of the right arm are not displayed on the 3D representation for a better visualization of the inside of the Y-maze. At the start of a preference trial (i.e. when opening the door of the acclimation chamber), the plover chick was allowed to expl¬ore the two test arms, from which came the odours, circulated by an air flow. To measure olfactory preferences, we recorded videos of the trials from above and measured the amount of time the chick spent with each test odour (i.e. in the preference zones) and which test odour it visited first. Illustrations by Marc Gilles.
Figure 3. Time spent by plover chicks with (a) the odour of an unfamiliar adult versus no odour (conspecific odour discrimination trial, N = 29 trials) and with (b) the odour of an unfamiliar adult versus the odour of a parent (parent odour discrimination trial, N = 24 trials). Each grey line represents a chick in a trial. Trials lasted 15 min (900 s). Note that chicks could be in either test arm but also in the start arm. To test for chicks’ preferences, we tested whether the proportion of time spent in the arm with the unfamiliar adult odour relative to the time spent in both test arms differed from 0.5 using one sample t-tests (conspecific odour discrimination trial (a): mean [95% CI] = 0.51 [0.42, 0.62], P = 0.71; parent odour discrimination trial (b): mean [95% CI] = 0.46 [0.35, 0.57], P = 0.48).
Figure 4. Sex and age differences in the latency of plover chicks to leave the acclimation chamber during their first trial in the Y-maze. The black line represents the linear regression, and the grey area the 95% confidence interval, of latency on age.
Figure A1. Y-maze apparatus used to conduct olfactory preference trials on plover chicks in the field. The Y-maze consisted of one start arm (with opaque cover) and two test arms (with semi-transparent cover). At the end of each of the two test arms, we placed (a) a test odour (cotton swab) and (b) an electric fan powered by a battery, which circulated air from the test odour towards the inside of the maze through a perforated wall. We recorded the preference trials (c) from above, (d) using a camera mounted on a tripod, directly in the field.
Can chicks smell their parents? No evidence of olfactory parent recognition in a shorebird
  • Article
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September 2024

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59 Reads

Animal Behaviour

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Tafitasoa J. Mijoro

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Supporting Information for: No sex difference in preen oil chemical composition during incubation in Kentish plovers

May 2024

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3 Reads

Supporting Informating for: Gilles, M., Kosztolányi, A., Rocha, A. D., Cuthill, I. C., Székely, T., & Caspers, B. A. (2024). No sex difference in preen oil chemical composition during incubation in Kentish plovers. PeerJ, 12, e17243.



Figure 1: Representative chromatogram of the preen oil of Kentish plovers. The illustration depicts a female Kentish plovers with a zoom on its uropygial gland secreting preen oil.
Figure 2: No sex difference in the preen oil composition of Kentish plovers. (A) Non-metric multidimensional scaling (NMDS) plot representing Bray–Curtis dissimilarity in chemical composition. 2D Stress measures the “goodness of fit” of the NMDS ordination, with a value <0.1 indicating a good fit. The ellipses for each sex (95% confidence intervals assuming a multivariate t-distribution) overlap entirely, highlighting the absence of a sex difference in beta diversity. Besides, no sex difference was detected in alpha diversity, namely (B) chemical diversity (Shannon index) and (C) chemical richness (number of substances) of preen oil.
No sex difference in preen oil chemical composition during incubation in Kentish plovers

May 2024

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85 Reads

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1 Citation

Preen oil, the secretion from the uropygial gland of birds, may have a specific function in incubation. Consistent with this, during incubation, the chemical composition of preen oil is more likely to differ between sexes in species where only one sex incubates than in species where both sexes incubate. In this study, we tested the generality of this apparent difference, by investigating sex differences in the preen oil composition of a shorebird species, the Kentish plover ( Anarhynchus , formerly Charadrius , alexandrinus ). As both sexes incubate in this species, we predicted the absence of sex differences in preen oil composition during incubation. In the field, we sampled preen oil from nine females and 11 males during incubation, which we analysed with gas chromatography–mass spectrometry (GC–MS). Consistent with predictions, we found no sex difference in preen oil composition, neither in beta diversity (Bray-Curtis dissimilarities) nor in alpha diversity (Shannon index and number of substances). Based on these results, we cannot conclude whether preen oil has a function during incubation in Kentish plovers. Still, we discuss hypothetical roles, such as olfactory crypsis, protection against ectoparasites or olfactory intraspecific communication, which remain to be tested.



A computational neuroscience framework for quantifying warning signals

December 2023

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54 Reads

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2 Citations

Animal warning signals show remarkable diversity, yet subjectively appear to share certain visual features that make defended prey stand out and look different from more cryptic palatable species. For example, many (but far from all) warning signals involve high contrast elements, such as stripes and spots, and often involve the colours yellow and red. How exactly do aposematic species differ from non‐aposematic ones in the eyes (and brains) of their predators? Here, we develop a novel computational modelling approach, to quantify prey warning signals and establish what visual features they share. First, we develop a model visual system, made of artificial neurons with realistic receptive fields, to provide a quantitative estimate of the neural activity in the first stages of the visual system of a predator in response to a pattern. The system can be tailored to specific species. Second, we build a novel model that defines a ‘neural signature’, comprising quantitative metrics that measure the strength of stimulation of the population of neurons in response to patterns. This framework allows us to test how individual patterns stimulate the model predator visual system. For the predator–prey system of birds foraging on lepidopteran prey, we compared the strength of stimulation of a modelled avian visual system in response to a novel database of hyperspectral images of aposematic and undefended butterflies and moths. Warning signals generate significantly stronger activity in the model visual system, setting them apart from the patterns of undefended species. The activity was also very different from that seen in response to natural scenes. Therefore, to their predators, lepidopteran warning patterns are distinct from their non‐defended counterparts and stand out against a range of natural backgrounds. For the first time, we present an objective and quantitative definition of warning signals based on how the pattern generates population activity in a neural model of the brain of the receiver. This opens new perspectives for understanding and testing how warning signals have evolved, and, more generally, how sensory systems constrain signal design.


Figure 3. Preference task on patterned background. (A) Exemplars of presented stimuli with target values indicated below each image. (B) Élő rankings for the 2-AFC task with a patterned background. Each condition (i.e. one combination of background slope and target slope) is represented by five closed circles (made more visible using jittering) corresponding to five different stimuli versions. Thin box plots give the variability of preference scores across those 5 stimuli versions. Background slope values are colour-coded: blue for -1, orange
From natural to sexual selection: Revealing a hidden preference for camouflage patterns

September 2023

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139 Reads

Natural and sexual selection can be in conflict in driving the evolution of sexual ornamentation. Sexual selection favours detectability to potential mates, whereas natural selection penalises detectability to avoid predators. Focusing on signal efficiency rather than detectability, however, suggests that natural and sexual selection need not be antagonistic. Considerable evidence demonstrates that people prefer images that match the statistics of natural scenes, likely because they are efficiently processed by the brain. This "processing bias" suggests that background-matching camouflage can be favoured by natural and sexual selection. We conducted an online experiment and showed for the first time human preference for camouflaged stimuli. Because the underlying visual mechanisms are shared across vertebrates, our results suggest that camouflage patterns could serve as evolutionary precursors of sexual signals.


Habitat geometry rather than visual acuity limits the visibility of a ground‐nesting bird's clutch to terrestrial predators

September 2023

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152 Reads

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4 Citations

The nests of ground‐nesting birds rely heavily on camouflage for their survival, and predation risk, often linked to ecological changes from human activity, is a major source of mortality. Numerous ground‐nesting bird populations are in decline, so understanding the effects of camouflage on their nesting behavior is relevant to their conservation concerns. Habitat three‐dimensional (3D) geometry, together with predator visual abilities, viewing distance, and viewing angle, determine whether a nest is either visible, occluded, or too far away to detect. While this link is intuitive, few studies have investigated how fine‐scale geometry is likely to help defend nests from different predator guilds. We quantified nest visibility based on 3D occlusion, camouflage, and predator visual modeling in northern lapwings, Vanellus vanellus , on different land management regimes. Lapwings selected local backgrounds that had a higher 3D complexity at a spatial scale greater than their entire clutches compared to local control sites. Importantly, our findings show that habitat geometry—rather than predator visual acuity—restricts nest visibility for terrestrial predators and that their field habitats, perceived by humans as open, are functionally closed with respect to a terrestrial predator searching for nests on the ground. Taken together with lapwings' careful nest site selection, our findings highlight the importance of considering habitat geometry for understanding the evolutionary ecology and management of conservation sites for ground‐nesting birds.


Dazzle: surface patterns that impede interception

August 2023

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99 Reads

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11 Citations

Biological Journal of the Linnean Society

‘Dazzle coloration’ describes a wide variety of high-contrast patterns allegedly providing protection against attack during motion. Previous research falls into three broad groups. First, studies using humans demonstrate that certain surface patterns can cause significant misperceptions in controlled laboratory conditions, although the effects are inconsistent in both direction and magnitude. Second, experiments on target capture or tracking also show effects that are strongly dependent upon the test paradigm. It has not been established that these laboratory findings generalize to other species, or to the real world. Third, mainly comparative studies build a case for longitudinal striping being involved in escape strategies in some squamate reptiles. We suggest that: (1) the concept of dazzle conflates a description of appearance with presumed function; (2) some effects attributed to dazzle have not been distinguished clearly from other mechanisms of protective coloration; and (3) confusion persists over the evidence necessary to attribute a dazzle function to markings. We refine the definition of dazzle to exclude appearance: dazzle is coloration that interferes with target interception, as a result of misperception of its speed, trajectory and/or range. Our review clarifies discussion of dazzle, and sets out a coherent and practical framework for future research.


Habitat geometry rather than visual acuity limits the visibility of a ground-nesting bird's clutch to terrestrial predators.

July 2023

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46 Reads

The nests of ground-nesting birds rely heavily on camouflage for their survival, and predation pressures, often linked to human activity, are a major source of mortality. Numerous ground-nesting bird populations are in decline, so understanding the effects of camouflage on their nesting behaviour is of relevance to their conservation concern. Habitat three-dimensional (3D) geometry together with predator visual abilities, viewing distance, and viewing angle determine whether a nest is either visible, occluded or too far away to detect. While this link is intuitive, few studies have investigated how fine-scale geometry is likely to help defend nests from different predator guilds. We quantified nest visibility based on 3D occlusion, camouflage, and predator visual modelling in northern lapwing, Vanellus Vanellus, on different land management regimes. Lapwings selected local backgrounds that had a higher 3D complexity at a spatial scale greater than their entire clutches compared to nearby control sites. Importantly, our findings show that habitat geometry – rather than predator visual acuity restricts nest visibility to terrestrial predators, and that an open field would actually be perceived as a closed habitat to a terrestrial predator searching for nests on the ground. Taken together with lapwings’ careful nest site selection, our findings highlight the importance of considering habitat geometry for understanding the evolutionary ecology and management of conservation sites for ground-nesting birds.


Citations (72)


... As we sampled preen oil in the middle of the nestling-rearing period (on average ca 11 days after hatching), this may have been too long after mate choice for sex differences to be detected. Note, however, that even if preen oil does not convey information about the sex of individuals, it may still be used as an olfactory signal during mate choice by encoding information on relatedness or individual quality (Whittaker et al. 2013, Potier et al. 2018, Gilles et al. 2024b). Our new results also diminish the credibility of preen oil playing a role in chemically protecting eggs and/or nestlings. ...

Reference:

Chemical signatures in the preen oil of pied flycatchers: testing reproducibility and exploring ontogeny
No sex difference in preen oil chemical composition during incubation in Kentish plovers

... In real-world agricultural environments, such as during rainy seasons or in hazy conditions, crop leaves often appear against highly disruptive backgrounds. Images captured under these conditions typically contain significant noise (Kang et al., 2023b;Rowe et al., 2024), which leads to a noticeable decline in the robustness and generalization capabilities of deep learning models in practical applications. In terms of data acquisition and labeling, the diversity of plant species means that not all plant data is readily accessible; this is particularly true for data on crop diseases that are difficult to obtain or that require substantial human and material resources to collect. ...

How background complexity impairs target detection

Animal Behaviour

... To study animal color, early adopters of hyperspectral imaging used the technique to investigate the tuning of dichromatic visual pigment sensitivities to real forest and underwater scenes [27], surface color in butterfly wings [28], iridescent spiders [29], beetle wing cases [30], and frog skin [31], and camouflage in cuttlefish [32] and crabs on natural substrates [33]. Additionally, researchers have used hyperspectral imaging to simulate avian perception of warning colors on lepidopteran wings [34], to measure color and simulate warning coloration for newts [35], and to measure bioluminescence in sharks [36]. Kim and colleagues [37] combined hyperspectral imaging with 3D scanning to produce the first-to our knowledge-hyperspectral 3D model of an animal museum specimen, a colorful Papuan lorikeet (Charmosyna papou goliathina; now considered Stella's lorikeet, Charmosyna stellae). ...

A computational neuroscience framework for quantifying warning signals
  • Citing Article
  • December 2023

... However, we have limited knowledge of the exact mechanism of how predators find nests (Vickery et al. 1992, Pelech et al. 2010 Page 2 of 12 Ibáñez-Álamo et al. 2015). To counter these threats, shorebirds have developed several antipredation strategies -cryptic eggs and plumage, hiding nests in vegetation, change of odours during incubation, or using distraction displays to avoid predation (Gochfeld 1984, Reneerkens et al. 2005, Humphreys and Ruxton 2020, Hancock et al. 2023. Visual cues are often critical during the day, with predators such as raptors and corvids relying on sight to detect the movement of adult birds or the presence of eggs and chicks in exposed areas (Santisteban et al. 2002). ...

Habitat geometry rather than visual acuity limits the visibility of a ground‐nesting bird's clutch to terrestrial predators

... Although likely, we cannot conclude that zebrafish stripes function exclusively in social signalling; zebrafish stripes could serve an alternative or additional anti-predator function. Contrasting stripes on an animal in motion have been hypothesized to function in 'dazzle colouration', which Scott-Samuel et al. [71] define as a defensive colouration which 'interferes with the interception of a moving object, due to perceptual distortions of target speed, trajectory and/or range'. Moreover, Hogan et al. [72,73] suggest that dazzle colouration might enhance the anti-predatory benefits of the confusion effect. ...

Dazzle: surface patterns that impede interception

Biological Journal of the Linnean Society

... Figure based on Komatsu et al., 2013. (Stuart-Fox et al., 2020, Thomas et al., 2023. If we instead consider iridescence as a holistic Gestalt, we need not assume that this signal is more complicated or harder to remember than any other. ...

Interactions between color and gloss in iridescent camouflage

Behavioral Ecology

... Huang et al. [18] also reported that H. vitessoides individuals living in larger cohorts (n = 90) had significantly larger body sizes and developed faster than those that lived in small cohorts (n = 30). However, overly large cohorts and the extremely high density of group-living larvae may result in strong intraspecific competition to limited food sources and draw the attention of predators [19][20][21]. Therefore, a common strategy applied by many gregarious species is to maintain moderate group sizes [7]. ...

Warning Coloration, Body Size, and the Evolution of Gregarious Behavior in Butterfly Larvae
  • Citing Article
  • March 2023

The American Naturalist

... Importantly, while both parents can benefit from either parent's investment in care, parents pay the costs of caring independently (Houston et al., 2005;Lessells, 2012;Sz ekely, 2014). Biparental care thus represents a form of cooperation and provides scope for conflict between parents, where each parent may benefit by having their partner invest more in care while reducing their own level of care, potentially even deserting their offspring and leaving all care to their partner (Harrod & Mumme, 2021;Houston et al., 2005;Korpim€ aki et al., 2011;Lessells, 2012;McDonald et al., 2023;Sz ekely, 2014). Understanding patterns of desertion is central to understanding the diversity of uniparental and biparental care in nature and has key consequences for our understanding of patterns of population productivity, given parental care can impact offspring survival (Dudeck et al., 2018;Holman & Kokko, 2013;Sz ekely, 2014;Sz ekely et al., 1996). ...

Remating opportunities and low costs underlie maternal desertion
  • Citing Article
  • December 2022

Evolution

... km 2 (Seto et al. 2011) and global population is expected to increase to 8.5 billion (from 7.7 billion in 2019) (United Nations Development Programme 2022) by 2030. Although the expansion of urban lands on rural and natural Eugenia A. Bonetti eugeniabonetti98@gmail.com 1 they also act as population sources for other species, such as Peregrines in the United Kingdom, which may help recolonize vacant territories (Drewitt et al. 2021). Furthermore, as previously observed for threatened species (Ives et al. 2016), cities can serve as conservation hotspots for raptors like Burrowing Owls (Athene cunicularia) (Rebolo-Ifrán et al. 2017). ...

Northerly dispersal trends in a lowland population of Peregrines Falco peregrinus in southwest England

Ringing & Migration

... Examples of how this seven-step W-E-L-F-A-R-E checklist could form the basis for a validated systematic and repeatable assessment of giraffe emotional states are provided in Table 2. Changes in underlying physiological state, e.g., reproduction [48,76,77] and senescence [78], will influence giraffe activity and, therefore, behavioural expression and body language; as such individual animal physiology and development, plus season, need to be considered when making positive inferences of mental states in the zoo. Suggestions for what mental welfare outputs may present as are also given to encourage others to consider the feasibility of their measurement. ...

Adolescence and the development of social behaviour in giraffes

Mammalian Biology