Helge B D Sorensen’s research while affiliated with Technical University of Denmark and other places

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Publications (201)


Mortality Risk Assessment Using Deep Learning-Based Frequency Analysis of EEG and EOG in Sleep
  • Article

September 2024

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16 Reads

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1 Citation

Sleep

Teitur Óli Kristjánsson

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Helge B D Sorensen

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[...]

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Poul Jennum

Study Objectives To assess whether the frequency content of electroencephalography (EEG) and electrooculography (EOG) during nocturnal polysomnography (PSG) can predict all-cause mortality. Methods Power spectra from PSGs of 8,716 participants, included from the MrOS Sleep Study and the Sleep Heart Health Study (SHHS), were analyzed in deep learning-based survival models. The best-performing model was further examined using SHapley Additive Explanation (SHAP) for data-driven sleep-stage specific definitions of power bands, which were evaluated in predicting mortality using Cox Proportional Hazards models. Results Survival analyses, adjusted for known covariates, identified multiple EEG frequency bands across all sleep stages predicting all-cause mortality. For EEG, we found an all-cause mortality hazard ratio (HR) of 0.90 (CI95% 0.85–0.96) for 12–15 Hz in N2, 0.86 (CI95% 0.82–0.91) for 0.75–1.5 Hz in N3, and 0.87 (CI95% 0.83–0.92) for 14.75–33.5 Hz in REM sleep. For EOG, we found several low-frequency effects including an all-cause mortality HR of 1.19 (CI95% 1.11–1.28) for 0.25 Hz in N3, 1.11 (CI95% 1.03–1.21) for 0.75 Hz in N1, and 1.11 (CI95% 1.03–1.20) for 1.25–1.75 Hz in Wake. The gain in the concordance index (C-index) for all-cause mortality is minimal, with only a 0.24% increase: The best single mortality predictor was EEG N3 (0-0.5 Hz) with C-index of 77.78% compared to 77.54% for confounders alone. Conclusion Spectral power features, possibly reflecting abnormal sleep microstructure, are associated with mortality risk. These findings add to a growing literature suggesting that sleep contains incipient predictors of health and mortality.


A Deep Transfer Learning Approach for Sleep Stage Classification and Sleep Apnea Detection Using Wrist-Worn Consumer Sleep Technologies

March 2024

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61 Reads

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7 Citations

IEEE transactions on bio-medical engineering

Obstructive sleep apnea (OSA) is a common, underdiagnosed sleep-related breathing disorder with serious health implications Objective - We propose a deep transfer learning approach for sleep stage classification and sleep apnea (SA) detection using wrist-worn consumer sleep technologies (CST). Methods – Our model is based on a deep convolutional neural network (DNN) utilizing accelerometers and photo-plethysmography signals from nocturnal recordings. The DNN was trained and tested on internal datasets that include raw data from clinical and wrist-worn devices; external validation was performed on a hold-out test dataset containing raw data from a wrist-worn CST. Results - Training on clinical data improves performance significantly, and feature enrichment through a sleep stage stream gives only minor improvements. Raw data input outperforms feature-based input in CST datasets. The system generalizes well but performs slightly worse on wearable device data compared to clinical data. However, it excels in detecting events during REM sleep and is associated with arousal and oxygen desaturation. We found; cases that were significantly underestimated were characterized by fewer of such event associations. Conclusion - This study showcases the potential of using CSTs as alternate screening solution for undiagnosed cases of OSA. Significance - This work is significant for its development of a deep transfer learning approach using wrist-worn consumer sleep technologies, offering comprehensive validation for data utilization, and learning techniques, ultimately improving sleep apnea detection across diverse devices.





SViT: a Spectral Vision Transformer for the Detection of REM Sleep Behavior Disorder

July 2023

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33 Reads

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11 Citations

IEEE Journal of Biomedical and Health Informatics

REM sleep behavior disorder (RBD) is a parasomnia with dream enactment and presence of REM sleep without atonia (RSWA). RBD diagnosed manually via polysomnography (PSG) scoring, which is time intensive. Isolated RBD (iRBD) is also associated with a high probability of conversion to Parkinson's disease. Diagnosis of iRBD is largely based on clinical evaluation and subjective PSG ratings of REM sleep without atonia. Here we show the first application of a novel spectral vision transformer (SViT) to PSG signals for detection of RBD and compare the results to the more conventional convolutional neural network architecture. The vision-based deep learning models were applied to scalograms (30 or 300 second windows) of the PSG data (EEG, EMG and EOG) and the predictions interpreted. A total of 153 RBD (96 iRBD and 57 RBD with PD) and 190 controls were included in the study and 5-fold bagged ensemble was used. Model outputs were analyzed per-patient (averaged), with regards to sleep stage, and the SViT was interpreted using integrated gradients. Models had a similar per-epoch test F1 score. However, the vision transformer had the best per-patient performance, with an F1 score 0.87. Training the SViT on channel subsets, it achieved an F1 score of 0.93 on a combination of EEG and EOG. EMG is thought to have the highest diagnostic yield, but interpretation of our model showed that high relevance was placed on EEG and EOG, indicating these channels could be included for diagnosing RBD.


Continuous Monitoring of Vital Signs After Hospital Discharge: A Feasibility Study
  • Article
  • Full-text available

June 2023

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109 Reads

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2 Citations

Patient Safety

Introduction Increasing demand for inpatient beds limits capacity and poses a challenge to the healthcare system. Early discharge may be one solution to solve this problem, and continuous vital sign monitoring at home could safely facilitate this goal. We aimed to document feasibility of continuous home monitoring in patients after hospital discharge. Methods Patients were eligible for inclusion if they were admitted with acute medical disease and scheduled for discharge. They wore three wireless vital sign sensors for four days at home: a chest patch measuring heart rate and respiratory rate, a pulse oximeter, and a blood pressure (BP) monitor. Patients with ≥6 hours monitoring time after discharge were included in the analysis. Primary outcome was percentage of maximum monitoring time of heart rate and respiratory rate. Results Monitoring was initiated in 80 patients, and 69 patients (86%) had ≥6 hours monitoring time after discharge. The chest patch, pulse oximeter, and BP monitor collected data for 88%, 60%, and 32% of the monitored time, respectively. Oxygen desaturation <88% was observed in 92% of the patients and lasted for 6.3% (interquartile range [IQR] 0.9%–22.0%) of total monitoring time. Desaturation below 85% was observed in 83% of the patients and lasted 4.2% [IQR 0.4%–9.4%] of total monitoring time. 61% had tachypnea (>24/minute); tachycardia (>130/minute) lasting ≥30 minutes was observed in 28% of the patients. Conclusions Continuous monitoring of vital signs was feasible at home with a high degree of valid monitoring time. Oxygen desaturation was commonly observed.

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Visualization of labeling. Patient A represents a patient with no SAEs during the monitoring period and with monitoring ending due to discharge. The green area shows the last 24 h of monitoring which is defined to be physiologically stable. Patient B represents a patient with two events occurring during monitoring. For each event, 8 h prior to the event is defined as physiologically unstable (red area). Patient C represents a patient with no events but with the time of discharge occurring after monitoring has ended. This patient is removed from the analyses
Flow diagram of the proposed circadian KDE model. The plots in the top row illustrate the continuously measured vital signs in before and after filtering as well as applying the windows for computing the observations. The bottom row shows the flow in the novel circadian KDE model. μk\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${\upmu }_{\mathrm{k}}$$\end{document} and σk\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${\upsigma }_{\mathrm{k}}$$\end{document} are the standardization parameters, xk\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${\mathbf{x}}_{\mathrm{k}}$$\end{document} are the model observations, and Hk\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$${\mathbf{H}}_{\mathrm{k}}$$\end{document} is the bandwidth matrix, all specific for the submodel, k\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\mathrm{k}$$\end{document}. SI stability index
Setup of each iteration in the experimental setup showing the splits of observations for training and evaluating the models. Observations are chosen at random but with the constraint that observations from one patient cannot be present in both training and evaluation. The held-out samples are not used in the iteration
Available data in observations and events. A: Percentage of the observations containing data from each of the three devices used and all together. B: Percentage of events which have no complete observations, i.e. with all required features, in the period of 8 h prior to the event
Illustration of the stability index prior to events and for stable test and training observations for the circadian model. The boxplots are ordered by the time to event from each observation, as indicated on the x-axis. The boxplot at ‘Test’ represents the stability index on the stable observations in the test set, and the boxplot at ‘Model’ represents the observations for which the model is created. The dashed line is at the median stability index of the stable observations in the test set. The plot is created from the 20 analyses conducted for the circadian model with a window size of 120 min. Whiskers represents the most extreme value within 1.5 times in inter quantile range and outliers outside this region are not shown in the plot

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Quantifying physiological stability in the general ward using continuous vital signs monitoring: the circadian kernel density estimator

June 2023

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85 Reads

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4 Citations

Journal of Clinical Monitoring and Computing

Technological advances seen in recent years have introduced the possibility of changing the way hospitalized patients are monitored by abolishing the traditional track-and-trigger systems and implementing continuous monitoring using wearable biosensors. However, this new monitoring paradigm raise demand for novel ways of analyzing the data streams in real time. The aim of this study was to design a stability index using kernel density estimation (KDE) fitted to observations of physiological stability incorporating the patients’ circadian rhythm. Continuous vital sign data was obtained from two observational studies with 491 postoperative patients and 200 patients with acute exacerbation of chronic obstructive pulmonary disease. We defined physiological stability as the last 24 h prior to discharge. We evaluated the model against periods of eight hours prior to events defined either as severe adverse events (SAE) or as a total score in the early warning score (EWS) protocol of ≥ 6, ≥ 8, or ≥ 10. The results found good discriminative properties between stable physiology and EWS-events (area under the receiver operating characteristics curve (AUROC): 0.772–0.993), but lower for the SAEs (AUROC: 0.594–0.611). The time of early warning for the EWS events were 2.8–5.5 h and 2.5 h for the SAEs. The results showed that for severe deviations in the vital signs, the circadian KDE model can alert multiple hours prior to deviations being noticed by the staff. Furthermore, the model shows good generalizability to another cohort and could be a simple way of continuously assessing patient deterioration in the general ward.


Patient flowchart
Deviations in continuously monitored electrodermal activity before severe clinical complications: a clinical prospective observational explorative cohort study

May 2023

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26 Reads

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2 Citations

Journal of Clinical Monitoring and Computing

Monitoring of high-risk patients in hospital wards is crucial in identifying and preventing clinical deterioration. Sympathetic nervous system activity measured continuously and non-invasively by Electrodermal activity (EDA) may relate to complications, but the clinical use remains untested. The aim of this study was to explore associations between deviations of EDA and subsequent serious adverse events (SAE). Patients admitted to general wards after major abdominal cancer surgery or with acute exacerbation of chronic obstructive pulmonary disease were continuously EDA-monitored for up to 5 days. We used time-perspectives consisting of 1, 3, 6, and 12 h of data prior to first SAE or from start of monitoring. We constructed 648 different EDA-derived features to assess EDA. The primary outcome was any SAE and secondary outcomes were respiratory, infectious, and cardiovascular SAEs. Associations were evaluated using logistic regressions with adjustment for relevant confounders. We included 714 patients and found a total of 192 statistically significant associations between EDA-derived features and clinical outcomes. 79% of these associations were EDA-derived features of absolute and relative increases in EDA and 14% were EDA-derived features with normalized EDA above a threshold. The highest F1-scores for primary outcome with the four time-perspectives were 20.7–32.8%, with precision ranging 34.9–38.6%, recall 14.7–29.4%, and specificity 83.1–91.4%. We identified statistically significant associations between specific deviations of EDA and subsequent SAE, and patterns of EDA may be developed to be considered indicators of upcoming clinical deterioration in high-risk patients.


Figure 3. (A): Bland-Altman plot of II-lead and single-lead ECG results. Comparison of le from a 12-lead ECG versus a single-lead ECG on the anterolateral left chest. Limit of agreem LoA Upper dotted line = upper LoA, lower dotted line = lower LoA. Dotted line in the mid mean difference. Dark area around dotted lines = 95% confidence intervals (95% CI). Mean d ence = −0.019 mV (95% CI: −0.030 to −0.009). Upper LoA = 0.082 mV (95% CI 0.064 to 0.100) lower LoA = −0.121 mV (95% CI: −0.139 to −0.103). (B): Bland-Altman plot of V5-lead and si lead ECG results. Comparison of lead V5 from a 12-lead ECG versus a single-lead ECG on th terolateral left chest. Dotted line in the middle = mean difference. Limit of agreement = LoA per dotted line = upper LoA, lower dotted line = lower LoA. Dark area around dotted lines = Figure 3. (A): Bland-Altman plot of II-lead and single-lead ECG results. Comparison of lead II from a 12-lead ECG versus a single-lead ECG on the anterolateral left chest. Limit of agreement = LoA Upper dotted line = upper LoA, lower dotted line = lower LoA. Dotted line in the middle = mean difference. Dark area around dotted lines = 95% confidence intervals (95% CI). Mean difference = −0.019 mV (95% CI: −0.030 to −0.009). Upper LoA = 0.082 mV (95% CI 0.064 to 0.100) and lower LoA = −0.121 mV (95% CI: −0.139 to −0.103). (B): Bland-Altman plot of V5-lead and single-lead ECG results. Comparison of lead V5 from a 12-lead ECG versus a single-lead ECG on the anterolateral left chest. Dotted line in the middle = mean difference. Limit of agreement = LoA. Upper dotted line = upper LoA, lower dotted line = lower LoA. Dark area around dotted lines = 95% confidence intervals (95% CI). Mean difference −0.005 mV (95% CI −0.021 to 0.010). Upper LoA 0.145 mV (95% CI: 0.118 to 0.172) and lower LoA −0.155 mV (95% CI: −0.182 to −0.128). (C): Bland-Altman plot of V6-lead and single-lead ECG results. Comparison of lead V6 from a 12-lead ECG versus a single-lead ECG on the anterolateral left chest. Limit of agreement = LoA Upper dotted line = upper LoA, lower dotted line = lower LoA. Dotted line in the middle = mean difference. Dark area around dotted lines = 95% confidence intervals (95% CI). Mean diff −0.006 mV (95% CI −0.021, 0.010). Upper LoA 0.138 (95% CI: 0.112; 0.164) and lower LoA −0.149 (95% CI −0.175; −0.123).
2 × 2 table showing the number of patients with significant ST deviations ≥ 0.1 mV on the 12-lead ECG and how they relate to results from the cardiac-PET divided into reversible anterolateral ischemia or no reversible anterolateral ischemia.
Wireless Single-Lead versus Standard 12-Lead ECG, for ST-Segment Deviation during Adenosine Cardiac Stress Scintigraphy

March 2023

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32 Reads

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4 Citations

Wearable wireless electrocardiographic (ECG) monitoring is well-proven for arrythmia detection, but ischemia detection accuracy is not well-described. We aimed to assess the agreement of ST-segment deviation from single- versus 12-lead ECG and their accuracy for the detection of reversible ischemia. Bias and limits of agreement (LoA) were calculated between maximum deviations in ST segments from single- and 12-lead ECG during 82Rb PET-myocardial cardiac stress scintigraphy. Sensitivity and specificity for reversible anterior-lateral myocardial ischemia detection were assessed for both ECG methods, using perfusion imaging results as a reference. Out of 110 patients included, 93 were analyzed. The maximum difference between single- and 12-lead ECG was seen in II (−0.019 mV). The widest LoA was seen in V5, with an upper LoA of 0.145 mV (0.118 to 0.172) and a lower LoA of −0.155 mV (−0.182 to −0.128). Ischemia was seen in 24 patients. Single-lead and 12-lead ECG both had poor accuracy for the detection of reversible anterolateral ischemia during the test: single-lead ECG had a sensitivity of 8.3% (1.0–27.0%) and specificity of 89.9% (80.2–95.8%), and 12-lead ECG a sensitivity of 12.5% (3.0–34.4%) and a specificity of 91.3% (82.0–96.7%). In conclusion, agreement was within predefined acceptable criteria for ST deviations, and both methods had high specificity but poor sensitivity for the detection of anterolateral reversible ischemia. Additional studies must confirm these results and their clinical relevance, especially in the light of the poor sensitivity for detecting reversible anterolateral cardiac ischemia.


Citations (70)


... We also find approaches that addressed the individual detection of respiratory events [12,13,14], EEG arousals [15,16], or the identification of other sleep transients such as K-complexes [17]. However, multi-event detection approaches are still scarce, with most of them targeting a maximum of two events simultaneously [18,19,20,21,22,23]. Consequently, concatenation of multiple independent algorithms is still needed for completion of a full PSG analysis. ...

Reference:

Multi-task deep-learning for sleep event detection and stage classification
A Deep Transfer Learning Approach for Sleep Stage Classification and Sleep Apnea Detection Using Wrist-Worn Consumer Sleep Technologies
  • Citing Article
  • March 2024

IEEE transactions on bio-medical engineering

... Advantages of a wrist wearable include high acceptability, low cost, and the possibility of recording multiple days/nights to raise accuracy. To date, three studies in distinct datasets of patients with iRBD [148,155] or RBD secondary to PD [156] and controls with and without other sleep disorders have shown sensitivities of 79-95% and specificities of 92-96%. Current limitations of actigraphy include potential reliance on sleep diaries and the uncertainty around the transferability of existing algorithms to other devices and datasets. ...

Fully automated detection of isolated rapid-eye-movement sleep behavior disorder using actigraphy
  • Citing Article
  • February 2024

Sleep Medicine

... Such integration interprets EEG and fNIRS signals as visual embedding. One study explored a spectral vision transformer (ViT) for REM sleep behaviour disorder (RBD) and suggested that EEG channels are promising for RBD diagnosis [35]. In [36], a new sleep-stage classification method was proposed using ViT architecture to analyze multichannel EEG sleep data. ...

SViT: a Spectral Vision Transformer for the Detection of REM Sleep Behavior Disorder
  • Citing Article
  • July 2023

IEEE Journal of Biomedical and Health Informatics

... Hospital wards have employed EWS in manual or electronic charts [3]. However, managing critical care and emergencies requires continuous monitoring of health data, especially for vulnerable cases like frail elderly, hospital-discharged patients, and lonely smart home residents [4]. Although hospitals use wearable devices for CD detection in the frame of track and triage systems [5], for private spaces including smart homes these reports are limited. ...

Continuous Monitoring of Vital Signs After Hospital Discharge: A Feasibility Study

Patient Safety

... The promised levels of AI compared to the highest potential AI levels of algorithms assessed in peer-reviewed studies are presented in Table 3. A total of five studies assessing algorithms with the potential for advanced AI application have been published on two CVSM solutions (50%): four from WARD 24/7 [34][35][36][37] and one from SV [38]. A total of 21 studies assessing algorithms with the potential for simple AI applications have been published on all CVSM solutions (100%): six from VM [11,[39][40][41][42][43], seven from WARD 24/7 [13][14][15][44][45][46][47], six from SV [48][49][50][51][52][53], and two from Biobeat [54,55] ( Figure 3). ...

Quantifying physiological stability in the general ward using continuous vital signs monitoring: the circadian kernel density estimator

Journal of Clinical Monitoring and Computing

... But these modalities are not necessarily the ones most linked to detection of oncoming complications, where nonclassical modalities such as perfusion index [27] blood glucose [28] transcutaneous blood-gasses [29] heart-rate-variability [30] or may represent more direct physiological measurements with better association to outcomes. Other modalities can include sympathetic activity by electrodermal assessment [31] or contact free bedsensors for assessment of respiratory rate, tidal and minute volume [32]. ...

Deviations in continuously monitored electrodermal activity before severe clinical complications: a clinical prospective observational explorative cohort study

Journal of Clinical Monitoring and Computing

... There are new development directions for larger-area wearable devices as current form factors do not meet use-case demands. Some examples include the use of single-lead wearable devices in comparison to the goldstandard 12-lead systems for electrocardiography (ECG) [11]. The current limitation in the application of larger wearable patches is that there is a minimal understanding of skin wearable devices regarding user perception, compliance, comfort, and wearability. ...

Wireless Single-Lead versus Standard 12-Lead ECG, for ST-Segment Deviation during Adenosine Cardiac Stress Scintigraphy

... This leads to unpractical and sub-optimal solutions. Moreover, the current literature often employs network architectures that rely on the concatenation of multiple independent inputs, each specialized in detecting a specific event or depend on the creation of default templates, necessitating prior domain-specific knowledge [24,19]. Additionally, sleep staging is often overlooked as part of the analytical process, resulting in an incomplete assessment of sleep patterns. ...

MSED: A Multi-Modal Sleep Event Detection Model for Clinical Sleep Analysis

IEEE transactions on bio-medical engineering

... This may be partly due to deterioration occurring between manual observations, where continuous vital sign monitoring (CVSM) with wireless sensors can enable the early detection of patient deterioration, which is important for timely treatment and prevention of further decline [7][8][9]. Clinical implementation of CVSM may reduce the risk of serious adverse events (SAEs) [10,11], as it has been documented to detect more vital sign deviations [12,13]. NEWS-based algorithms have demonstrated an inconsistent ability to predict subsequent SAEs when applied to CVSM [14,15]. ...

Continuous monitoring is superior to manual measurements in detecting vital sign deviations in patients with COVID-19
  • Citing Article
  • February 2023

Acta Anaesthesiologica Scandinavica

... However, future studies might use computer-assisted analysis to quantify the degree of narrowing. 47 While the study includes a substantial patient cohort to derive a robust statistical model, the inherent variability of DISE suggests that even larger datasets would enhance reliability. The external validation dataset is relatively small, particularly for the favorable prediction group, which limits the strength of conclusions drawn from the prediction model. ...

Automatic scoring of drug-induced sleep endoscopy for obstructive sleep apnea using deep learning
  • Citing Article
  • December 2022

Sleep Medicine