He-Ping Ying’s research while affiliated with Zhejiang University and other places

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Publications (68)


Fig 1.  (Color online) (a) The tip filament of a scroll wave at the moment t = 200; (b) The circular trajectory of the spiral tip in each layer.
Excitability parameter is ε = 0.04.
Fig 2.  (Color online) The time evolution of the period of spiral waves are plotted from the 1th, 16th, and 32th layer.
Three excitability gradient are illustrated in (a) ε32 = 0.045, (b) ε32 = 0.052, and (c) ε32 = 0.068.
Fig 3.
(Color online) (a) Filament of tips in three dimensional space for the moment t = 200 at ε32 = 0.045. The two lines show the same filament from two different viewpoints. The open circle is the one that projection into the (x, y− plane). (b) The tip trajectory of every layer. (c) The phase filament twist angle of each layer correspond to the top one.
Fig 4.
(Color online) (a) Filament of tips in three dimensional space for the moment t = 500 at ε32 = 0.052; (b) The outward meandering tip trajectories of every layer; (c) The trajectories of the top and bottom layer from the outside to the inside.
Fig 5.
(Color online)(a) Filament of tips in three dimensional space for the moment t = 500 at ε32 = 0.068; (b) The outward meandering tip trajectories of every layer; (c) The trajectories of the first, 16th and the 32th layer along the outward direction respectively.

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Dynamics of Scroll Wave in a Three-Dimensional System with Changing Gradient
  • Article
  • Full-text available

March 2016

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88 Reads

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1 Citation

Xiao-Ping Yuan

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Jiang-Xing Chen

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[...]

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He-Ping Ying

The dynamics of a scroll wave in an excitable medium with gradient excitability is studied in detail. Three parameter regimes can be distinguished by the degree of gradient. For a small gradient, the system reaches a simple rotating synchronization. In this regime, the rigid rotating velocity of spiral waves is maximal in the layers with the highest filament twist. As the excitability gradient increases, the scroll wave evolutes into a meandering synchronous state. This transition is accompanied by a variation in twisting rate. Filament twisting may prevent the breakup of spiral waves in the bottom layers with a low excitability with which a spiral breaks in a 2D medium. When the gradient is large enough, the twisted filament breaks up, which results in a semi-turbulent state where the lower part is turbulent while the upper part contains a scroll wave with a low twisting filament.

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Influences of periodic mechanical deformation on pinned spiral waves

September 2014

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22 Reads

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23 Citations

In a generic model of excitable media, we study the behavior of spiral waves interacting with obstacles and their dynamics under the influences of simple periodic mechanical deformation (PMD). Depending on the characteristics of the obstacles, i.e., size and excitability, the rotation of a pinned spiral wave shows different scenarios, e.g., embedding into or anchoring on an obstacle. Three different drift phenomena induced by PMD are observed: scattering on small partial-excitable obstacles, meander-induced unpinning on big partial-excitable obstacles, and drifting around small unexcitable obstacles. Their underlying mechanisms are discussed. The dependence of the threshold amplitude of PMD on the characteristics of the obstacles to successfully remove pinned spiral waves on big partial-excitable obstacles is studied.


FIG. 3. (a) Phase space of an initially stationary electron at (x,y) ¼ (180,60), where the laser pulses eventually collide, when it crosses n ¼ 140 for injection-laser intensities a 1 ¼ 0.4 and a 1 ¼ 1.0. (b) The trajectories of this electron in the physical space (n,y) for a 1 ¼ 0, a 1 ¼ 0.4, and a 1 ¼ 1. The phase space (p x,y ) of electrons initially in ðx; yÞ 2 ½ð160; 165Þ; ð40; 60ފ as they cross n ¼ 140 for (c) a 1 ¼ 0.4 and (d) a 1 ¼ 1.0.
FIG. 4. Evolution of p x and p y of a test electron for (a) and (b) a 1 ¼ 0.4 and (c) and (d) a 1 ¼ 1.0. Phase space (p x,y ) of test electrons initially in the collision region of the two laser pulses for (e) a 1 ¼ 0.4 and (f) a 1 ¼ 1.0. The intensity of the pump pulse is a 0 ¼ 4.0.
Total charge of the injected electrons versus the intensity a 1 of the injection pulse. For a 0 = 1.5 (solid line with asterisks, right scale), the charge first increases and then saturates. For a 0 = 4 (dashed line with dots, left scale), the charge first increases and then (after reaching a 1 = 0.3) decreases steadily. Please note the difference in the scales of the electron charge in the two cases.
Electron dynamics with only the main laser pulse. (a) Schematic trajectories of two electrons starting at ξ = 0 and different y values. (b) The trapping boundary (red curve) in the (p  x,y ) phase space as defined by the trajectories of the electrons (blue dots) calculated from Eq.  (1) . Note that the y direction is bounded by the bubble edge, as marked by the horizontal red solid line in (a). (c) Electron density at t = 200 from the PIC simulation, and (d) the corresponding (p  x,y ) space at ξ ∼ 140 [shown in (c) by the red dashed line] clearly marks the trapping boundary, agreeing with that in (b).
Dual effects of stochastic heating on electron injection in laser wakefield acceleration

August 2014

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89 Reads

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2 Citations

Electron injection into the wakefield of an intense short laser pulse by a weaker laser pulse propagating in the opposite direction is reconsidered using two-dimensional (2D) particle-in-cell simulations as well as analytical modeling. It is found that for linearly polarized lasers the injection efficiency and the quality of the wakefield accelerated electrons increase with the intensity of the injection laser only up to a certain level, and then decreases. Theory and simulation tracking test electrons originally in the beat region of the two laser pulses show that the reduction of the injection efficiency at high injection-laser intensities is caused by stochastic overheating of the affected electrons. (C) 2014 AIP Publishing LLC.


(Color online) Interaction between a pinned spiral wave and an emitted wave induced by an EP. (a) The evolution of successful liberation of a pinned spiral wave. The EP is applied at . A wave with two ends (“1” and “2” at t = 16) is emitted from the obstacle (the filled white circle). The arrows show the direction of wave propagation. (b) An unsuccessful example of liberation. After the application of EP at , the spiral is still pinned at t = 21. The period of the pinned spiral on the obstacle is . The duration and amplitude of the EP are and , respectively.
(Color online) An example of successful liberation of a pinned spiral by a REP. All the parameters are the same as those in fig. 1(b) except for the rotation of the electric pulse with angular frequency .
(Color online) The curves RW vs. for different obstacle size. Open circles and open squares are plotted from and , respectively. is the angle frequency of a rotating spiral.
(Color online) Interaction between a REP and a pinned spiral wave. Their rotation directions are both clockwise. (a) Evolution of successful liberation. The end “1” is disconnected from the obstacle at . The REP is applied at . (b) Evolution of unsuccessful liberation. The tip “2” is outside of the refractory tail of the spiral. The REP is applied at .
(Color online) (a) The dependence of RW on the radius of obstacle . The amplitude of REP is (open squares) and (filled circles), respectively. (b) Reattachment of a liberated spiral under the effect of a REP. The REP is applied at . Other parameters: , , and .
Liberation of a pinned spiral wave by a rotating electric pulse

July 2014

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79 Reads

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31 Citations

Spiral waves may be pinned to anatomical heterogeneities in the cardiac tissue, which leads to monomorphic ventricular tachycardia. Wave emission from heterogeneities (WEH) induced by electric pulses in one direction (EP) is a promising method for liberating such waves by using heterogeneities as internal virtual pacing sites. Here, based on the WEH effect, a new mechanism of liberation by means of a rotating electric pulse (REP) is proposed in a generic model of excitable media. Compared with the EP, the REP has the advantage of opening wider time window to liberate pinned spiral. The influences of rotating direction and frequency of the REP, and the radius of the obstacles on this new mechanism are studied. We believe this strategy may improve manipulations with pinned spiral waves in heart experiments.


Simulating bistable biochemical systems by means of reactive multiparticle collision dynamics

July 2014

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36 Reads

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8 Citations

Communications in Nonlinear Science and Numerical Simulation

Based on a reactive multiple particle collision method, we construct a mesoscopic dynamics model to simulate chemical system. The validity of the reactive multiple particle collision method under various conditions in a double-feedback bi-stable chemical system is studied. Then, we extend it to simulate diffusion-limited reactions with fast reaction rate in cellular environment. Using the improved method, we observe bi-stable behavior with randomly distributed reactants and spatial domain separation of opposite phases. The particle-based mesoscopic method is computationally efficient, although hydrodynamic interactions and fluctuation are both properly accounted for. Stochastic effects shown to play dominant roles in biochemical dynamics are also considered. The improved method could be used to explore a variety of reactions with disparate scale of reaction rates.


Collision of counterpropagating laser-excited wake bubbles

June 2014

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64 Reads

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4 Citations

Physical Review E

The collision of wake bubbles behind two counterpropagating laser pulses in rarefied plasma is investigated using particle-in-cell simulation. Special attention is paid to the highly nonlinear dynamics of the electrons in the interaction region. It is found that, as the two bubbles approach each other and collide, the electrons in the interaction region first oscillate in a periodic fashion, forming a quasistationary dense electron density ripple with fairly regular spatial structure. At longer times, the electron motion becomes chaotic, and the density grating is gradually smeared. The electrons escape in the transverse direction, and eventually the two bubbles merge to form a single one. The transition of the electron motion from regular to chaotic is confirmed by analytical modeling using test electrons moving in counterpropagating planar electromagnetic waves. The findings shed light on the dynamics of wake-bubble collisions and the complex behavior induced by multiple laser pulses in plasmas.


Emitting waves from heterogeneity by a rotating electric field

September 2013

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77 Reads

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20 Citations

In a generic model of excitable media, we simulate wave emission from a heterogeneity (WEH) induced by an electric field. Based on the WEH effect, a rotating electric field is proposed to terminate existed spatiotemporal turbulence. Compared with the effects resulted by a periodic pulsed electric field, the rotating electric field displays several improvements, such as lower required intensity, emitting waves on smaller obstacles, and shorter suppression time. Furthermore, due to rotation of the electric field, it can automatically source waves from the boundary of an obstacle with small curvature.


Spiral wave death, breakup induced by ion channel poisoning on regular Hodgkin–Huxley neuronal networks

November 2012

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59 Reads

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60 Citations

Communications in Nonlinear Science and Numerical Simulation

The electric activities of neurons are often affected by ion channel poisoning, in particularly, interrupting normal transduction of signals within the brain. This may be due to changes in conductance and the number of active channels. Tetraethylammonium, for example, is known to cause ion channel poisoning of potassium channels, while tetrodotoxin has similar detrimental effects on sodium channels. The occurrence of spiral waves in neuronal systems was observed frequently in the past, and it was argued that these waves of excitation may play an important role by the propagation of electric signals across the quiescent regions of the brain. In this work, the parameters and determine the ratio, with regards to the total number of ion channels, of active potassium and sodium channels, respectively, and they are taken to be representative also for the degree of channel poisoning. In the numerical studies, a well developed stable rotating spiral wave is used as the initial state to be controlled by the ion channel poisoning. We show that, under noise-free conditions, spiral waves are terminated whenever and are set lower than a given threshold. However, breakup of spiral wave occurs if the intensity of the channel noise increases. In order to quantify these observations, we use a simple but robust synchronization measure, which captures succinctly the transition from spiral waves to homogeneous neuronal activity and/or broken turbulent state. The critical thresholds can be inferred from the abrupt changes occurring in the corresponding dependencies of synchronization versus the and ratios. Furthermore, the sampled membrane potentials of a single neuron are recorded to detect the periodical spiral wave in a feasible way and the results could be dependent of the position of node (or site) to be monitored. Notably, small synchronization factors can be tightly associated to states where the formation of spiral waves is robust to channel poisoning and weak channel noise.


Inwardly rotating spirals in nonuniform excitable media

January 2012

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96 Reads

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13 Citations

Physical Review E

Inwardly rotating spirals (IRSs) have attracted great attention since their observation in an oscillatory reaction-diffusion system. However, IRSs have not yet been reported in planar excitable media. In the present work we investigate rotating waves in a nonuniform excitable medium, consisting of an inner disk part surrounded by an outer ring part with different excitabilities, by numerical simulations of a simple FitzHugh-Nagumo model. Depending on the excitability of the medium as well as the inhomogeneity, we find the occurrence of IRSs, of which the excitation propagates inwardly to the geometrical spiral tip.



Citations (37)


... For example, occurrence of spiral wave in the cardiac tissue will block the signal propagation emitted from sinoatrial node and thus heartbeat is attacked to change the normal shrinkage of heart. Therefore, many effective schemes [13][14][15][16][17] have been proposed to suppress the propagation of spiral wave and thus the instability of spiral waves can be prevented. In the cortex, continuous pulses and wave fronts can been emitted from the pacemaker [18][19][20] which played by the stable spiral wave, and many neurons can be driven to reach collective bursts synchronously that could account for seizure-like disease. ...

Reference:

Selection of spatial pattern on resonant network of coupled memristor and Josephson Junction
Dynamics of Scroll Wave in a Three-Dimensional System with Changing Gradient

... Even more important to the search for phase transitions is the so-called "Binder cumulant," first introduced by Kurt Binder in 1981 in a study of the classical Ising Model [45]. In many settings, such as thermal or disordered systems, it is considered to be one of the most accurate and reliable means of detecting a critical point [131][132][133], and it has since been applied to a wide variety of models [134][135][136][137][138][139][140][141][142]. ...

Dynamic Monte Carlo study of the two-dimensional quantum XY model
  • Citing Article
  • December 1998

Modern Physics Letters B

... Such control is usually realized by tuning the collision point of the two pulses [22]. Moreover, the electron beam quality can also be improved by adjusting laser parameters [19,26]. ...

Dual effects of stochastic heating on electron injection in laser wakefield acceleration

... Through the interaction of activators and inhibitors, vegetation pattern forms various complex structures and patterns in space [35][36][37][38]. In addition to vegetation patterns, similar principles of pattern formation are observed in other systems, such as chemical systems [39][40][41], neural networks [42][43][44][45][46], and spiral wave patterns [47,48]. In chemical systems, Turing patterns arise through reaction-diffusion processes, forming intricate and stable structures [40,49]. ...

Influences of periodic mechanical deformation on pinned spiral waves
  • Citing Article
  • September 2014

... The C, Ge, AlP, and AlN nanotubes in batteries have higher electrochemical parameters than C, Ge, AlP, and AlN nanocages. The Ionics electrochemical parameters of C nanocages in batteries are decreased when the numbers of C atoms are increased [47,48,48]. The electrochemical parameters for F, Cl, Br, and metals doped on various types of C, Ge, BP, BN, AlN, and AlP nanotubes, nanocages, and nanocones in batteries in previous works have same trends with calculated electrochemical parameters of C, Ge, AlP, and AlN nanocages and nanotubes in batteries in this study [21][22][23][24][25]. ...

Liberation of a pinned spiral wave by a rotating electric pulse

... Yang et al. [28] deviate from the limitation of co-propagation and present PIC simulations for two different angles (0.09 and 0.15 rad) of collision between the wakefields, for the purpose of eval-uating effects of the angle on charge loading and energy spread. The head-on collision between wakefields was considered by Deng et al. [29], using PIC simulations to investigate the wakefield front dynamics as well as the ensuing electron oscillations. The PIC simulations indicate that the collision result in chaotic electron motion and a transverse escape of electrons from the bubble region. ...

Collision of counterpropagating laser-excited wake bubbles

Physical Review E

... In the past few years, a scaling theory for the imaginary-time quantum critical relaxation dynamics has been developed [7,8] in analogy to the critical relaxation dynamics in classical systems. [9][10][11][12][13][14] It has been shown that the initial information can affect the critical relaxation dynamics in the macroscopic time scale owing to the divergence of the correlation time at the critical point. Universal behaviors have been found during the imaginarytime relaxation process with a homogeneous initial state. ...

Dynamic Monte Carlo Study of the Two-Dimensional Quantum XY Model
  • Citing Article
  • November 2011

... The quark loop with zeromomentum operator insertion, i.e., q = 0, for the disconnected contribution, C disc Γ , is estimated stochastically using Z 4 random noise sources. This calculation is accelerated with a combination of the truncated solver with bias correction method and the hopping parameter expansion [23,24]. For the scalar case, the disconnected contribution is calculated using the vacuum subtracted operator O q S − ⟨O q S ⟩ [25]. ...

Padé-Z2 estimator of determinants

Physical Review D