Habtamu Dagne’s research while affiliated with Addis Ababa Science and Technology University and other places

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Publications (1)


Fig. 1. Results obtained from OVAT approach for NaOCl, impregnation time, HgCl 2 , and AgNO 3 on clean culture and explant viability.
Fig. 3. The developed 3-D interactive plots for illustrating the explant viability as a response with respect to different combinations of selected parameters (a) Interaction effect of impregnation time and NaOCl concentration, (b) Interaction effect of HgCl 2 concentration and NaOCl concentration (c) Interaction effect of AgNO 3 concentration and NaOCl concentration (d) Interaction effect of HgCl 2 concentration and impregnation time (e) Interaction effect of AgNO 3 concentration and impregnation time (f) Interaction effect of AgNO 3 concentration and HgCl 2 concentration.
Fig. 4. Mean square error vs number of hidden layer neurons plot.
Fig. 5. The performance plot of the constructed ANN model.
Fig. 6. The regression plots of the constructed ANN model (a) training, (b) validation, (c) test, and (d) overall performance.

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Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques
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July 2023

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111 Reads

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9 Citations

Heliyon

Habtamu Dagne

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In vitro, sterilization is one of the key components for proceeding with plant tissue cultures. Since the effectiveness of sterilization has a direct impact on the culture's final outcomes, there is a crucial need for optimization of the sterilization process. However, compared with traditional optimizing methods, the use of computational approaches through artificial intelligence-based process modeling and optimization algorithms provides a precise optimal condition for in vitro culturing. This study aimed to optimise in vitro sterilization of grape rootstock 3309C using RSM, ANN, and genetic algorithm (GA) techniques. In this context, two output responses, namely, Clean Culture and Explant Viability, were optimised using the models developed by RSM and ANN, followed by a GA, to obtain a globally optimal solution. The most influential independent factors, such as HgCl2, NaOCl, AgNO3, and immersion time, were considered input variables. The significance of the developed models was investigated with statistical and non-statistical techniques and was optimised to determine the significance of selected inputs. The optimal clean culture of 91%, and the explant viability of 89% can be obtained from 1.62% NaOCl at a 13.96 min immersion time, according to MLP-NSGAII. Sensitivity analysis revealed that the clean culture and explant viability were less sensitive to AgNO3 and more sensitive to immersion time. Results showed that the differences between the GA predicted and validation data were significant after the performance validation of predicted and optimised sterilising agents with immersion time combinations were tested. In general, GA, a potent methodology, may open the door to the development of new computational methods in plant tissue culture.

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Citations (1)


... Nevertheless, sodium hypochlorite (NaOCl) is often regarded as the primary chemical disinfectant because of its broad antibacterial range, fast bactericidal effect, ability to dissolve in water, and general durability. Moreover, the cleaning procedure might impact the subsequent growth of the explant since the well-being of the explant is a crucial determinant that greatly influences its ability to regenerate (Dagne et al. 2023). ...

Reference:

Refinement of surface sterilization protocol for in vitro olive (Olea europaea L.) shoot proliferation and optimizing by machine learning techniques
Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques

Heliyon