Grant A. Mitchell’s research while affiliated with CHU Sainte-Justine and other places

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Publications (240)


From Pancytopenia to Hyperleukocytosis, an Unexpected Presentation of Immune Reconstitution Inflammatory Syndrome in an Infant with Methylmalonic Acidemia
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August 2024

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23 Reads

Children

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Amandine Remy

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Jade Hindié

A 2.5-month-old girl admitted for failure to thrive and severe pancytopenia was diagnosed with methylmalonic acidemia (MMA) secondary to transcobalamin II deficiency, an inborn error of vitamin B12 metabolism. Opportunistic Cytomegalovirus and Pneumocystis jirovecii pneumonia led to severe acute respiratory distress syndrome (ARDS) and immune reconstitution inflammatory syndrome (IRIS) after treatment initiation with vitamin B12 supplementation. In children with interstitial pneumonia-related ARDS, normal lymphocyte count should not delay invasive procedures required to document opportunistic infections. MMA can be associated with underlying lymphocyte dysfunction and vitamin B12 supplementation can fully reverse the associated immunodeficiency. IRIS may appear in highly treatment-responsive forms of pancytopenia in children and prompt treatment of dysregulated inflammation with high-dose corticosteroids should be initiated.

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Figure 1. Alternate fates of trans-3MGC CoA. In the leucine degradation pathway, trans-3MGC CoA is generated as a pathway intermediate. Whereas this intermediate is normally metabolized to acetoacetate and acetyl CoA by AUH and HMGCL activities, respectively, an alternate non-enzymatic chemical reaction sequence (see italics) leads to protein 3MGCylation.
Figure 2. Effect of incubation temperature on trans-3MGC CoA-dependent acylation of BSA. A 3MCCCase enzyme assay was conducted and filtered to remove 3MCCCase. BSA (0.5 mg/mL) was added to the filtrate fraction, and sample aliquots were incubated for 4 h at temperatures ranging from 20 • C to 55 • C. For control incubations, the 3MCCCase assay was conducted in the absence of a 3MC CoA substrate or 3MCCCase enzyme. Following incubation, samples were probed for 3MGCylated BSA using α-3MGC IgG immunoblot analysis. The immunoblot shown is representative of an experiment performed on three separate occasions.
Figure 3. Effect of incubation time on trans-3MGC CoA-dependent acylation of BSA. A 3MCCCase assay was conducted and filtered to remove 3MCCCase. BSA (0.5 mg/mL) was added to the filtrate, and sample aliquots were then incubated for 2, 4, 6, and 24 h at either 20 °C or 37 °C. For control incubations, the 3MCCCase assay was conducted in the absence of either 3MC CoA substrate or 3MCCCase enzyme. Following incubation, each sample was probed for 3MGCylated BSA using α-3MGC IgG immunoblot analysis. The immunoblot shown is representative of an experiment performed on three separate occasions.
Figure 8. IEM-induced formation of toxic byproducts of trans-3MGC CoA. In primary 3MGC aciduria, a deficiency in HMGCL causes trans-3MGC CoA levels to rise. In this disorder, two distinct biochemical pathways are affected: ketogenesis and leucine catabolism (see pathway block #1, depicted with a red box). Since HMG CoA cannot be metabolized to acetoacetate and acetyl CoA in this case, it is instead dehydrated to trans-3MGC CoA via AUH, which then generates toxic metabolites via a series of non-enzymatic chemical reactions (see Figure 1). In a similar but distinct manner, a deficiency in AUH (pathway block #2 depicted with a red box) also leads to a buildup of trans-3MGC CoA but only from leucine degradation (the ketogenesis pathway is unaffected in this IEM). In secondary 3MGC aciduria, labeled as "Mitochondrial Dysfunction" in this figure, whereas no leucine/ketogenesis pathway deficiencies exist (that is, both AUH and HMGCL are functional), various other IEMs (not shown) adversely affect mitochondrial energy metabolism, resulting in the diversion of acetyl CoA away from TCA cycle entry toward trans-3MGC CoA [22]. In each instance, as trans-3MGC CoA is formed, it is susceptible to the same series of non-enzymatic chemical reactions, resulting in the production of toxic byproducts, including 3MGC acid, protein 3MGCylation, and, conceivably, acylation of other amine-containing biomolecules in mitochondria. Note that although two red boxes are shown, only one or the other is deficient in any given scenario. HMGCS2 = HMG CoA Synthase 2.
Factors Affecting Non-Enzymatic Protein Acylation by trans-3-Methylglutaconyl Coenzyme A

July 2024

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15 Reads

Metabolites

The leucine catabolism pathway intermediate, trans-3-methylglutaconyl (3MGC) CoA, is considered to be the precursor of 3MGC acid, a urinary organic acid associated with specific inborn errors of metabolism (IEM). trans-3MGC CoA is an unstable molecule that can undergo a sequence of non-enzymatic chemical reactions that lead to either 3MGC acid or protein 3MGCylation. Herein, the susceptibility of trans-3MGC CoA to protein 3MGCylation was investigated. trans-3MGC CoA was generated through the activity of recombinant 3-methylcrotonyl CoA carboxylase (3MCCCase). Following enzyme incubations, reaction mixtures were spin-filtered to remove 3MCCCase. The recovered filtrates, containing trans-3MGC CoA, were then incubated in the presence of bovine serum albumin (BSA). Following this, sample aliquots were subjected to α-3MGC IgG immunoblot analysis to probe for 3MGCylated BSA. Experiments revealed a positive correlation between trans-3MGC CoA incubation temperature and 3MGCylated BSA immunoblot signal intensity. A similar correlation was observed between incubation time and 3MGCylated BSA immunoblot signal intensity. When trans-3MGC CoA hydratase (AUH) was included in incubations containing trans-3MGC CoA and BSA, 3MGCylated BSA immunoblot signal intensity decreased. Evidence that protein 3MGCylation occurs in vivo was obtained in studies with liver-specific 3-hydroxy-3-methylglutaryl (HMG) CoA lyase knockout mice. Therefore, trans-3MGC CoA is a reactive, potentially toxic metabolite, and under normal physiological conditions, lowering trans-3MGC CoA levels via AUH-mediated hydration to HMG CoA protects against aberrant non-enzymatic chemical reactions that lead to protein 3MGCylation and 3MGC acid production.



Insulin therapy in acute decompensation of holocarboxylase synthetase deficiency with hyperglycemia and ketoacidosis

March 2024

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24 Reads

Molecular Genetics and Metabolism Reports

An 11-month-old girl with severe acidosis, lethargy and vomiting, was diagnosed with holocarboxylase synthetase deficiency. She received biotin and was stable until age 8 years when vomiting, severe acidosis, hypoglycemia, and hyperammonemia developed. Management with intravenous glucose aiming to stimulate anabolism led to hyperglycemic ketoacidosis. Insulin therapy rapidly corrected biochemical parameters, and clinical status improved. We propose that secondary Krebs cycle disturbances affecting pancreatic beta cells impaired glucose-stimulated insulin secretion, resulting in insulinopenia.


The MMACHC variant c.158 T > C: Mild clinical and biochemical phenotypes and marked hydroxocobalamin response in cblC patients

February 2024

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62 Reads

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1 Citation

Molecular Genetics and Metabolism

Mutations in MMACHC cause cobalamin C disease (cblC, OMIM 277400), the commonest inborn error of vitamin B12 metabolism. In cblC, deficient activation of cobalamin results in methylcobalamin and adenosylcobalamin deficiency, elevating methylmalonic acid (MMA) and total plasma homocysteine (tHcy). We retrospectively reviewed the medical files of seven cblC patients: three compound heterozygotes for the MMACHC (NM_015506.3) missense variant c.158 T > C p.(Leu53Pro) in trans with the common pathogenic mutation c.271dupA (p.(Arg91Lysfs*14), “compounds”), and four c.271dupA homozygotes (“homozygotes”). Compounds receiving hydroxocobalamin intramuscular injection monotherapy had age-appropriate psychomotor performance and normal ophthalmological examinations. In contrast, c.271dupA homozygotes showed marked psychomotor retardation, retinopathy and feeding problems despite penta-therapy (hydroxocobalamin, betaine, folinic acid, l-carnitine and acetylsalicylic acid). Pretreatment levels of plasma and urine MMA and tHcy were higher in c.271dupA homozygotes than in compounds. Under treatment, levels of the compounds approached or entered the reference range but not those of c.271dupA homozygotes (tHcy: compounds 9.8–32.9 μM, homozygotes 41.6–106.8 (normal (N) < 14); plasma MMA: compounds 0.14–0.81 μM, homozygotes, 10.4–61 (N < 0.4); urine MMA: compounds 1.75–48 mmol/mol creatinine, homozygotes 143–493 (N < 10)). Patient skin fibroblasts all had low cobalamin uptake, but this was milder in compound cells. Also, the distribution pattern of cobalamin species was qualitatively different between cells from compounds and from homozygotes. Compared to the classic cblC phenotype presented by c.271dupA homozygous patients, c.[158 T > C];[271dupA] compounds had mild clinical and biochemical phenotypes and responded strikingly to hydroxocobalamin monotherapy.


TUFM ‐variants lead to white matter abnormalities mimicking multiple sclerosis

July 2023

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31 Reads

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3 Citations

Background: Defects in the mitochondrial respiratory chain (MRC) can lead to combined MRC dysfunctions (COXPDs) with heterogenous genotypes and clinical features. We report a patient carrying heterozygous variants in the TUFM gene who presented with clinical features compatible with COXPD4 and radiological findings mimicking multiple sclerosis (MS). Methods: A 37-year-old French Canadian woman was investigated for recent onset of gait and balance problems. Her previous medical history included recurrent episodes of hyperventilation associated with lactic acidosis during infections, asymptomatic Wolff-Parkinson-White syndrome, and non-progressive sensorineural deafness. Results: Neurological examinations revealed fine bilateral nystagmus, facial weakness, hypertonia, hyperreflexia, dysdiadochokinesia and dysmetria, and ataxic gait. Brain MRI showed multifocal white matter abnormalities in cerebral white matter as well as cerebellar hemispheres, brainstem, middle cerebellar peduncles, some of which mimicking MS. Analysis of native-state OXPHOS showed a combined decrease in CI/CII, CIV/CII, and CVI/CII. Exome sequencing detected two heterozygous TUFM gene variants. Little clinical progression was noted over a 5-year follow-up. Brain MRI remained unchanged. Conclusions: Our report broadens the phenotypic and radiological spectrum of TUFM-related disorders by adding milder, later-onset forms to the previously known early-onset, severe presentations. The presence of multifocal white matter abnormalities can be misinterpreted as due to acquired demyelinating diseases and thus, TUFM-related disorders should be added to the list of mitochondrial MS mimickers.


Transcobalamin II deficiency: newborn screening, cobalamin treatment, rapid metabolic improvement but hematological overcorrection with immune reconstitution inflammatory syndrome (IRIS)

May 2023

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85 Reads

A breastfed 3-mo girl referred for high methylmalonate (MMA) on urine screening (>500 mmol/mol creatinine; N, 0-25) had failure to thrive, thrombopenia 8x10^9/L (normal (N), 140-440), anemia (hemoglobin 46 g/L, N, 95-135), MCV 86.9 fL (N, 77-115), reticulocytes 5.3x10^9/L (N, 18-158) and leucocytes 3.98x10^9/L (N, 6-17.5). Pregnancy, delivery and maternal diet were unremarkable. Other pretreatment blood tests: vitamin B12, 657 pM (N, 191-1163); folate, N; ammonia, N; acylcarnitines (C3, 2.9 microM (N, 0.14-0.79); C4DC, N); total homocysteine (tHcy), 23.7 microM (N, 2.9-10); methionine, 25 microM (N 14-38); glycine, N; citrulline, 2 microM (N, 14-32). Urine organic acids (mmol/mol creatinine): MMA 1129 (N, 0-10); methylcitrate 15.7 (N, 1-5); 3-OH-propionate, N. Bone marrow showed large immature myeloid cells with absent megakaryocytes, initially suggesting malignancy. Hydroxocobalamin (1 mg/day im) and folate (1 mg/day po), without protein restriction (treatment day 0, D0), were followed by normalization of tHcy, <1 mM (D6), citrulline, 14 microM (D9), urine MMA, 24 (D12) but high blood elements (10^9/L): platelets (>450 (D11-17), maximum 909 (D16)); leukocytes (>30 (D4-20), maximum 53 (D17)) and reticulocytes (maximum 199 (D10)). Pulmonary cytomegalovirus and Pneumocystis jirovecii infections (D5) received cotrimoxazole, ganciclovir, prednisolone and 4-day intratracheal ventilation. Rapid genome sequencing revealed a homozygous splicing variant in TCN2, encoding transcobalamin 2. Hyper-MMA, hyper-tHcy plus normal B12 suggest B12 activation or TCN2 deficiencies. Hydroxocobalamin coincided with rapid metabolite improvement but hematopoietic overcorrection, thrombocytosis and high levels of immature leukocytes, perhaps causing cytokine imbalance, increased severity of pulmonary inflammation and IRIS.


Holocarboxylase synthetase deficiency with acute vomiting, life-threatening ketoacidosis and transient glucose intolerance in a previously well-controlled 8-year-old: the crucial role of insulin replacement

May 2023

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28 Reads

An 8-year-old girl with holocarboxylase synthetase-deficiency (HLCSD), vomiting and stupor. She presented at age 11m with severe lactic and ketoacidoses (pH 6.95), typical HLCSD metabolite pattern and biallelic pathogenic HLCS variants, and has developed normally with biotin 60 mg/day and L-carnitine. For 12h before admission, she vomited all medications, having abdominal pain, headache, tachycardia and tachypnea but was normotensive, afebrile, with no diarrhea. Testing revealed: capillary pH 6.90 (normal (N) 7.34-7.44), pCO2 21.3 mmHg (N 37-47), bicarbonate 4 mM (N 21-27), anion gap 42.8 mEq/L (N 12-20), lactate 17 mM (N 0.5-2.2), glucose 2.22 mM (N 4.1-5.9), 3-hydroxybutyrate 2.4 mM (N 0-0.6), ammonia 119 microM (N 5-55), leucocytes 29.4x10^9/L (N 4.5-13.5), neutrophils 15.6x10^9/L (N 1.5-7.3), CRP 6.1 mg/L (N 0-1); lipase N; ALT N; abdominal ultrasound N. Nasopharyngeal non-SARS-coronavirus-2 was detected. Initial treatment: fluid replacement, D10%-NS (5.9 mg glucose/kg/min), oral biotin (70 mg), L-carnitine 100 mg/kg/d iv q3h and ondansetron 0.1 mg/kg q8h. Progressive hyperglycemia (peak 21.8 mM after 5 hours of D10%) required insulin treatment for 16h (maximum, 0.08 units/kg/h, after 3h). Metabolites improved after insulin, with normalization of anion gap (4h post-insulin), lactate (10h), 3-hydroxybutyrate (10h), ammonemia (13h), acidosis (28h) and bicarbonate (28h). Ketoacidosis in pyruvate carboxylase (PC) deficiency responds to suppression of PC-mediated gluconeogenesis by glucose. Brief glucose intolerance inhibited cell entry/use of glucose despite hyperglycemia, prolonging demand for PC-mediated gluconeogenesis and its accompanying ketoacidosis, but resolved rapidly with exogenous insulin.



Figure 1. Illustration of the inheritance pattern in TYRII (ie, autosomal recessive).
An Infant with Bilateral Keratitis: From Infectious to Genetic Diagnosis

November 2022

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23 Reads

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1 Citation

American Journal of Case Reports

Patient: Male, 10-month-old Final Diagnosis: Tyrosinemia type 2 Symptoms: Decreased appetite • epiphora • irritability • photophobia Medication: — Clinical Procedure: — Specialty: Pediatrics and Neonatology Objective Challenging differential diagnosis Background Tyrosinemia Type II (TYRII) is a rare autosomal recessive inborn error of metabolism caused by deficiency of tyrosine aminotransferase (TAT), leading to hypertyrosinemia. TYRII patients often present in the first year of life with ocular and cutaneous findings, including corneal ulcers, pseudodendritic keratitis, and palmoplantar hyperkeratosis. The corneal involvement is often mistaken for herpes simplex virus (HSV) keratitis, which is a much commoner condition. Case Report A previously healthy 10-month-old male infant was referred to Ophthalmology for acute onset photophobia. Bilateral dendritiform corneal lesions raised the suspicion for herpetic keratitis. Additionally, a papular, crusted lesion was found on his thumb after a few days of hospitalization, also raising concerns about HSV. The patient’s clinical condition seemed to improve under intravenous acyclovir and supportive treatment. A conjunctival swab and crusted lesion on the thumb were tested for HSV using a polymerase chain reaction (PCR) technique, and both were negative. Nevertheless, given the clinical presentation and the favorable course of signs and symptoms, hospital discharge was planned with oral acyclovir. It was halted by an alternative diagnosis of autosomal recessive inborn error of metabolism, tyrosinemia type II, confirmed by elevated plasma tyrosine level and later by molecular analysis requested as a confirmatory investigation by the genetics medical team. Conclusions The corneal involvement in TYRII is often mistaken for HSV keratitis, and clinical course alone should not halt further investigations to rule out TYRII. Clinicians should suspect TYRII clinically when its characteristic ocular dendritiform lesions are present, namely in infancy or early childhood, and even in the absence of its typical cutaneous palmoplantar hyperkeratosis plaques.


Citations (55)


... Therefore, TUFM and its encoded protein are essential for maintaining cellular energy metabolism and functionality. In recent years, TUFM has been identified as playing significant roles in mitophagy (36) and autophagy (37) and is associated with diseases such as nonalcoholic fatty liver disease (38), Alzheimer's disease (39), and multiple sclerosis (40). However, the relationship between TUFM and T2DM, along with its complications, remains unclear. ...

Reference:

Mitochondrial dysfunction and onset of type 2 diabetes along with its complications: a multi-omics Mendelian randomization and colocalization study
TUFM ‐variants lead to white matter abnormalities mimicking multiple sclerosis
  • Citing Article
  • July 2023

... However, practical limitations of OGM should be concerned for its poor coverage of the heterochromatin region, which awaits comprehensive analysis in combination with other methodologies. Our experience may also be instructive for application to other monogenic disorders with common etiology of SVs in, for example, coagulation factor VIII, fibrillin 1, and neurofibromin 1 genes (Bonaglia et al, 2023;Büki et al, 2023;Fahiminiya et al, 2023). ...

Deciphering a novel complex inversion affecting F8 in a family with severe haemophilia A by optical genome mapping
  • Citing Article
  • March 2023

Haemophilia

... For example, in the fasted liver, high levels of Ac-CoA due to high activation of fatty acids and a relatively low rate of β-oxidation result in the stimulation of lipid biosynthesis, ketone body production, and the diversion of pyruvate metabolism toward gluconeogenesis and away from oxidation. Low levels of acetyl-CoA exert opposite effects [66,67]. Acetylation changes the properties of molecules. ...

The multiple facets of acetyl-CoA metabolism: Energetics, biosynthesis, regulation, acylation and inborn errors
  • Citing Article
  • November 2022

Molecular Genetics and Metabolism

... HMGCL deficiency is associated with hypoketotic hypoglycemia, hyperammonemia, metabolic acidosis, and potentially fatal cardiomyopathy of unknown pathophysiology [13,14]. This disorder has been modeled by liver-specific [15] and cardiomyocyte-specific [16] HMGCL gene ablation in mice. Liver-specific HMGCL knockout (KO) mice display elevated levels of HMG acid, 3-methylglutaric acid, and 3MGC acid in urine. ...

Cardiac-specific deficiency of 3-hydroxy-3-methylglutaryl coenzyme A lyase in mice causes cardiomyopathy and a distinct pattern of acyl-coenzyme A-related biomarkers
  • Citing Article
  • September 2022

Molecular Genetics and Metabolism

... Increased expression of SUCNR1, HIF1α, SDHA and SDHB [34] Placenta Gestational diabetes SUCNR1-mediated ERK1/2 phosphorylation [42] Retina/retinal ganglion cells Diabetic retinopathy SUCNR1-mediated ERK1/2/COX-2 signaling [55] Proliferative ischemic retinopathy SUCNR1 activation [144,145] Synovium Rheumatoid arthritis HIF1α induction and via SUCNR1 [60] Peripheral limb muscles Acute peripheral ischemia Increased SUCNR1 expression [146] Brain Hypoxia/ischemia brain injury SUCNR1 regulation of prostaglandin E 2 -prostaglandin E receptor 4 [147] As endothelial cells are central players in angiogenesis, we recently demonstrated that succinate, via SUCNR1, induced an angiogenic phenotype in endothelial cells in migration and sprouting assays, and by upregulating VEGF gene expression, a response which could be of pathological relevance in placental hypervascularization in gestational diabetes [42]. Furthermore, in diabetic rat retinas, knockdown of SUCNR1 hindered the activities of ERK1/2 and cyclooxygenase-2 (COX-2) and reduced the expression of PGE 2 and VEGF [55]. ...

The Succinate Receptor SUCNR1 Resides at the Endoplasmic Reticulum and Relocates to the Plasma Membrane in Hypoxic Conditions

Cells

... TFEB plays a crucial role in maintaining metabolic balance in retinal neurons and RPE cells through various mechanisms. A recent study revealed that mice with very-low-densitylipoprotein receptor (VLDLR) knockout developed retinal neovascularization due to an insufficient energy supply from fatty acid oxidation by high metabolic photoreceptors (Heckel et al., 2022). The study found that the insufficient energy metabolism in photoreceptors was not necessarily due to poor uptake of triglyceride-derived fatty acids, but rather due to the stimulation of the free fatty acid receptor 1 (FFAR1)to-TFEB axis (Heckel et al., 2022). ...

Triglyceride-derived fatty acids reduce autophagy in a model of retinal angiomatous proliferation

JCI Insight

... For instance, the complete beta oxidation of heptadecanoic acid results in 7 acetyl-CoA molecules and only 1 propionyl-CoA molecule, as depicted in Supplementary Fig. 2b. Consequently, the C3/C2 ratio resulting from the complete oxidation of odd-chain fatty acids (medium-and long-chain length), is still significantly lower than the C3/C2 ratio observed in Pcca -/-(A138T) mice 41 . ...

Propionic acidemia in mice: Liver acyl-CoA levels and clinical course
  • Citing Article
  • November 2021

Molecular Genetics and Metabolism

... Notably, in this study, the reduction observed in non-HDL cholesterol levels was partly explaining the protection from CVD disease supporting the possibility that ASGR1 could play an additional role in lipoprotein metabolism as well as in atherosclerosis. In vitro and in vivo studies showed that ASGR1 deficiency leads to reduced plasma cholesterol levels [12][13][14] via a mechanism involving the activation of liver X receptor (LXR) and AMP-activated protein kinase (AMPK). Increased LXR activity is known to enhance cholesterol efflux and excretion into the bile [12]. ...

Deficiency of ASGR1 in pigs recapitulates reduced risk factor for cardiovascular disease in humans

... Significant functional disability is commonly associated with open-lip schizencephaly [ 5 ]. It is important to note that both unilateral and bilateral forms of schizencephaly can also occur, with the size of the defect varying from small to large [ 6 ]. ...

Infantile onset carnitine palmitoyltransferase 2 deficiency: Cortical polymicrogyria, schizencephaly, and gray matter heterotopias in an adolescent with normal development

... We recently showed optical genome mapping (OGM) is an efficient test for diagnosing severe HA with Inv1. 3 This newly developed technology uses enzymes to fluorescently tag ultra-high molecular weight genomic DNA at specific sequence motifs without breaking the DNA. Both copy number variations (CNVs) and structural variations (SVs) can be evaluated in a single test. ...

A full molecular picture of F8 intron 1 inversion created with optical genome mapping
  • Citing Article
  • July 2021

Haemophilia