G. Kim Prisk’s research while affiliated with University of California, San Diego and other places

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Publications (252)


Quantitative assessment of Lung Opacities from Computed Tomography of Pulmonary Artery imaging Data in COVID-19 patients: Artificial Intelligence versus Radiologist
  • Article

April 2025

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8 Reads

BJR|Open

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INTRODUCTION AI deep learning algorithms trained on non-contrast CT scans effectively detect and quantify acute COVID-19 lung involvement. Our study explored whether radiological contrast affects the accuracy of AI-measured lung opacities, potentially impacting clinical decisions. We compared lung opacity measurements from AI software with visual assessments by radiologists using CTPA images of early-stage COVID-19 patients. MATERIAL AND METHODS This prospective single-center study included 18 COVID-19 patients who underwent CTPA due to suspected pulmonary embolism. Patient demographics, clinical data, and 30-day and 90-day mortality were recorded. AI tool (Pulmonary Density Plug-in, AI-Rad Companion Chest CT, SyngoVia, Siemens Healthineers) was used to estimate the quantity of opacities. Visual quantitative assessments were performed independently by two radiologists. RESULTS There was a positive correlation between radiologist estimations (r2 = 0.57) and between the AI data and the mean of the radiologists’ estimations (r2 = 0.70). Bland-Altman plot analysis showed a mean bias of + 3.06% between radiologists and -1.32% between the mean radiologist vs AI, with no outliers outside 2xSD for respective comparison. DISCUSSION The AI protocol facilitated a quantitative assessment of lung opacities and showed a strong correlation with data obtained from two independent radiologists, demonstrating its potential as a complementary tool in clinical practice. CONCLUSION In assessing COVID-19 lung opacities in CTPA images, AI tools trained on non-contrast images, provide comparable results to visual assessments by radiologists. ADVANCES IN KNOWLEDGE The Pulmonary Density Plug-in enables quantitative analysis of lung opacities in COVID-19 patients using contrast-enhanced CT images, potentially streamlining clinical workflows and supporting timely decision-making.



Study overview. Note, in the vaping cohort, global lung function was obtained at baseline (one time point only) and functional MRI was obtained at baseline (pre‐vaping) and (post‐vaping).
Example supine MR images in one control and one vaping participant (participant 19). Top panel demonstrates the processed specific ventilation (SV) image for control (left: Mean SV = 0.10, RD = 0.45) pre‐ (middle: Mean SV = 0.13, RD = 0.32) and post‐vaping (right: Mean SV = 0.10, RD = 0.45) whereby color scale represents SV values for each voxel as indicated by the spectrum on the right. Lower panel demonstrates the perfusion (Q) values extracted from the Arterial Spin Labelling imaging. Control (left: Mean Q = 0.73, RD = 0.78), pre‐vaping (middle: Mean Q = 0.67, RD = 0.68), post‐vaping (right: Mean Q = 0.83, RD = 0.56) and the color spectrums (far right). Missing voxels within the lung region of interest represent conduit vessels delivering blood to other lung regions that were removed using a threshold analysis (Burrowes et al., 2012). Voxels are not removed from the SV image. This is because SV is derived from 140 images and small variations is lung volume result in a smearing of the data such that the effective resolution in‐plane is ~1 cm. Thus, regions of the SV map corresponding to large vessels in the Q map represent lung tissue adjacent to the large vessels. While we could remove those voxels, the net effect on overall SVI parameters is small across all datasets (3.2% difference for mean SV and 1.0% difference for the RD of SV).
Significant correlations were found between the change in perfusion post‐vaping and BMI (a) and the airway resistance with BMI (b). The shaded regions colored for males and females display the 95% confidence interval.
Change in perfusion (mL/min/mL) separated into high (BMI >25 kg/m², N = 6) and low/normal (BMI ≤25 kg/m², N = 8) BMI groups.
Vaping causes an acute BMI‐dependent change in pulmonary blood flow
  • Article
  • Full-text available

October 2024

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54 Reads

Vaping use has skyrocketed especially among young adults, however there is no consensus on how vaping impacts the lungs. We aimed to determine whether there were changes in lung function acutely after a standard vaping session or if there were differences in lung function metrics between a healthy never‐vaping cohort (N = 6; 27.3 ± 3.0 years) and a young asymptomatic vaping cohort (N = 14; 26.4 ± 8.0 years) indicating chronic changes. Pulmonary function measurements and impulse oscillometry were obtained on all participants. Oxygen‐enhanced and Arterial Spin Labelling MRI were used to measure specific ventilation and perfusion, respectively, before and after vaping, and in the control cohort at baseline. MRI metrics did not show any significant differences in specific ventilation or perfusion after vaping. Heart rate increased post‐vaping (68.1 ± 10.5 to 71.3 ± 8.7, p = 0.020); however, this and other metrics did not show a nicotine dose‐dependent effect. There was a significant negative correlation between BMI and change in mean perfusion post‐vaping (p = 0.003); those with normal/low BMI showing an increase in perfusion and vice versa for high BMI. This may be due to subjects lying supine during vaping inhalation. Pulmonary function metrics indicative of airways resistance showed significant differences between the vaping and control cohorts indicating early airway changes.

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Impact of Supine Versus Semirecumbent Body Posture on the Distribution of Ventilation in Acute Respiratory Distress Syndrome

December 2023

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101 Reads

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2 Citations

Critical Care Explorations

In some patients with acute respiratory distress syndrome (ARDS), a paradoxical improvement in respiratory system compliance (C RS ) has been observed when assuming a supine (head of bed [HOB] 0°) compared with semirecumbent (HOB 35–40°) posture. We sought to test the hypothesis that mechanically ventilated patients with ARDS would have improved C RS , due to changes in ventilation distribution, when moving from the semirecumbent to supine position. We conducted a prospective, observational ICU study including 14 mechanically ventilated patients with ARDS. For each patient, ventilation distribution (assessed by electrical impedance tomography) and pulmonary mechanics were compared in supine versus semirecumbent postures. Compared with semirecumbent, in the supine posture C RS increased (33 ± 21 vs. 26 ± 14 mL/cm H 2 O, p = 0.005), driving pressure was reduced (14 ± 6 vs. 17 ± 7 cm H 2 O, p < 0.001), and dorsal fraction of ventilation was decreased (48.5 ± 14.1% vs. 54.5 ± 12.0%, p = 0.003). Posture change from semirecumbent to supine resulted in a favorable physiologic response in terms of improved C RS and reduced driving pressure—with a corresponding increase in ventral ventilation, possibly related to reduced ventral overdistension.


Increased intra-pulmonary shunt and alveolar dead space post COVID-19

September 2023

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29 Reads

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1 Citation

Journal of Applied Physiology: Respiratory, Environmental and Exercise Physiology

Increased intrapulmonary shunt(Q S /Q t ) and alveolar dead space(V D /V T ) are present in early recovery from COVID-19. We hypothesized patients recovering from severe-critical acute illness(NIH category 3-5) would have greater and longer-lasting increased Q S /Q t and V D /V T than patients with mild-moderate acute illness(NIH 1-2). Methods: 59 unvaccinated patients (33 male, age 52[38-61] years, BMI 28.8[25.3-33.6] kg/m ² ; median[IQR], 44 previous mild-moderate COVID-19, and 15 severe-critical disease), were studied 15-403 days post-acute SARS-CoV-2 infection. Breathing ambient air, steady-state mean alveolar PCO 2 and PO 2 were recorded simultaneously with arterial PO 2 /PCO 2 yielding aAPCO 2 , AaPO 2 , and from these, Q S /Q t %, V D /V T %, and relative alveolar ventilation (40 mmHg/P A CO 2 , V A rel) calculated. Results: Median PaCO 2 was 39.4[35.6-41.1] mmHg, PaO 2 92.3[87.1-98.2mmHg; P A CO 2 32.8[28.6-35.3] mmHg, P A O 2 112.9[109.4-117.0] mmHg, AaPO 2 18.8[12.6-26.8] mmHg, aAPCO 2 5.9 [4.3-8.0] mmHg, Q S /Q t 4.3 [2.1-5.9] % and V D /V T 16.6 [12.6-24.4] %. Only 14% of patients had normal Q S /Q t and V D /V T ;1% increased Q S /Q t but normal V D /V T ; 49% normal Q S /Q t and elevated V D /V T ;36% both abnormal Q S /Q t and V D /V T . Previous severe-critical COVID-19 predicted increased Q S /Q t (2.69 [0.82-4.57]% per category severity [95% CI], p<0.01), but not V D /V T . Increasing age weakly predicted increased V D /V T (1.6 [0.1-3.2]% per decade, p<0.04). Time since infection, BMI and comorbidities were not predictors (all p > 0.11). V A rel was increased in most patients. Conclusions: In our population, recovery from COVID-19 was associated with increased Q S /Q t in 37% of patients, increased V D /V T in 86%, and increased alveolar ventilation up to ~13 months post infection. NIH severity predicted Q S /Q t but not elevated V D /V T . Increased V D /V T suggests pulmonary micro-vascular pathology persists post COVID-19 in most patients.


Noninvasive Assessment of Impaired Gas Exchange with the Alveolar Gas Monitor Predicts Clinical Deterioration in COVID-19 Patients

September 2023

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116 Reads

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1 Citation

Background and objective: The COVID-19 pandemic magnified the importance of gas exchange abnormalities in early respiratory failure. Pulse oximetry (SpO2) has not been universally effective for clinical decision-making, possibly because of limitations. The alveolar gas monitor (AGM100) adds exhaled gas tensions to SpO2 to calculate the oxygen deficit (OD). The OD parallels the alveolar-to-arterial oxygen difference (AaDO2) in outpatients with cardiopulmonary disease. We hypothesized that the OD would discriminate between COVID-19 patients who require hospital admission and those who are discharged home, as well as predict need for supplemental oxygen during the index hospitalization. Methods: Patients presenting with dyspnea and COVID-19 were enrolled with informed consent and had OD measured using the AGM100. The OD was then compared between admitted and discharged patients and between patients who required supplemental oxygen and those who did not. The OD was also compared to SpO2 for each of these outcomes using receiver operating characteristic (ROC) curves. Results: Thirty patients were COVID-19 positive and had complete AGM100 data. The mean OD was significantly (p = 0.025) higher among those admitted 50.0 ± 20.6 (mean ± SD) vs. discharged 27.0 ± 14.3 (mean ± SD). The OD was also significantly (p < 0.0001) higher among those requiring supplemental oxygen 60.1 ± 12.9 (mean ± SD) vs. those remaining on room air 25.2 ± 11.9 (mean ± SD). ROC curves for the OD demonstrated very good and excellent sensitivity for predicting hospital admission and supplemental oxygen administration, respectively. The OD performed better than an SpO2 threshold of <94%. Conclusions: The AGM100 is a novel, noninvasive way of measuring impaired gas exchange for clinically important endpoints in COVID-19.



Citations (69)


... Of these, 37 studies underwent a detailed eligibility assessment and 13 were ultimately included for analysis in this scoping review. The final review included 274 patients [1][2][3][6][7][8][9][10][11][12][13][14][15]. The flow chart of the study selection process is shown in Figure 1. ...

Reference:

Physiological and clinical effects of trunk inclination adjustment in patients with respiratory failure: a scoping review and narrative synthesis
Impact of Supine Versus Semirecumbent Body Posture on the Distribution of Ventilation in Acute Respiratory Distress Syndrome

Critical Care Explorations

... Its use has been described both in invasively and noninvasively ventilated patients [5][6][7][8][9]. The SpO 2 /FiO 2 ratio is a good outcome predictor both in patients with coronavirus disease (COVID- 19) and non-COVID-19 ARDS patients [10,11]. In patients with COVID-19-associated pneumonia requiring oxygen therapy, the SpO 2 /FiO 2 ratio at admission showed an area under the curve (AUC) of 85% for the prediction of ARDS occurrence [12]. ...

Increased intra-pulmonary shunt and alveolar dead space post COVID-19
  • Citing Article
  • September 2023

Journal of Applied Physiology: Respiratory, Environmental and Exercise Physiology

... Furthermore, there are other aspects concerning these systems that still need validation, especially in terms of reproducibility since lung texture analysis may be affected by patient characteristics (i.e., lung volume, breath hold duration during CT scan acquisition, change in smoking status) or related to the scanner (i.e., calibration, radiation dose, acquisition and reconstruction protocols) [49][50][51]. ...

Quantitative Imaging Metrics for the Assessment of Pulmonary Pathophysiology: An Official American Thoracic Society and Fleischner Society Joint Workshop Report

Annals of the American Thoracic Society

... 2019 Novel Coronavirus (COVID-19) is a disease caused by the severe acute respiratory syndrome coronavirus (SARS CoV-2) virus (1). Acute severe COVID-19 is characterized by acute pneumonitis, pulmonary vascular endothelialitis, and microemboli leading to arterial hypoxemia associated with increased intrapulmonary shunt and alveolar dead space (2,3). ...

Reply to Ackerman et al.

European Respiratory Journal

... Just like on Earth, they would provide a safe and protected environment from all the hazards present on the surface (Haviland, 2021). Moreover, in the lunar environment, due to the lack of atmospheric agents and water, which on Earth brings sediment inside the caves, pyroducts might be free from lunar dust (Martin and Benaroya, 2023), which is known to be a great risk for the health of future astronauts and researchers, especially in the long-term (Pohlen et al., 2022). In this sense, the past experiences of human habitation and the use of pyroducts are an invaluable source of knowledge for engineers, planners, and designers from which to learn possible utilizations, adaptation, and planning strategies. ...

Overview of lunar dust toxicity risk

npj Microgravity

... The copyright holder for this preprint this version posted May 26, 2025. some patients exhibited signs of shunting at rest, as previously described [35]. Along this line, platypnoea-orthodeoxia syndrome, characterised by positional dyspnoea and arterial desaturation when upright, represents a unique complication increasingly recognised in post-COVID syndrome [36]. ...

Intrapulmonary Shunt and Alveolar Dead Space in a Cohort of Patients with Acute COVID-19 Pneumonitis and Early Recovery

European Respiratory Journal

... Surgical resection and autopsy analyses have shown small airway involvement in adults affected by asthma [6], with some data suggesting more inflammation and remodeling in small than in large airways [7]. Clinical studies have shown that SAD correlates with the risk of asthma development and exacerbations [8][9][10], worse asthma control [11][12][13], greater bronchial hyperresponsiveness [14], and loss of pulmonary function with age [15]. ...

Small Airways Dysfunction is Associated with Increased Exacerbations in Patients with Asthma
  • Citing Article
  • July 2022

Journal of Applied Physiology: Respiratory, Environmental and Exercise Physiology

... Capillary de-recruitment due to perivascular edema may well occur also in humans, as administration of a vasodilator agent was unable to restore blood flow in edematous lung regions (Scherrer et al., 1996). A recent study (Buxton et al., 2022) provides data from a novel analysis on the spatial/temporal dynamics of blood flow in the human lung measured noninvasively, potentially useful to estimate the vascular control mechanisms involved. ...

A novel nonlinear analysis of blood flow dynamics applied to the human lung

Journal of Applied Physiology: Respiratory, Environmental and Exercise Physiology

... Classical methods used to assess V/Q mismatch are either unfeasible at the bedside (e.g., the Multiple Inert Gas Elimination Technique approach) (19), or they estimate only one side of the V/Q mismatch spectrum (i.e., shunt or dead space) (20), or susceptible of underestimation due to physiologic mechanisms of compensation (e.g., low shunt fraction in presence of hypoxic pulmonary vasoconstriction) (21). Recently, a bedside radiation-free lung imaging method, electrical impedance tomography (EIT) (22), has been introduced to quantify V/Q mismatch in patients with ARDS (23,24). ...

Using pulmonary gas exchange to estimate shunt and deadspace in lung disease: Theoretical approach and practical basis
  • Citing Article
  • March 2022

Journal of Applied Physiology: Respiratory, Environmental and Exercise Physiology

... In systems utilising carbon dioxide (CO 2 ) and oxygen (O 2 ) analysers for indirect measurement of N 2 , the same requirements noted for N 2 analysers should be met for the calculated N 2 gas concentrations. Manufacturers and users should be aware of the potential for cross-sensitivity between CO 2 and O 2 analysers, which in one system led to overestimation of FRC and was corrected by a software update [33,34]. Of nine current manufacturers of MBW equipment surveyed, four meet the specification for direct or indirect measurement of N 2 tracer gas concentration and four only reported O 2 analyser accuracy of within 1% and CO 2 accuracy within 0.1%. ...

Reference:

2201519.full
The effect of O 2 and CO 2 cross-sensitivity sensor error in the Eco Medics Exhalyzer D device on measures of conductive and acinar airway function

ERJ Open Research