Frances C. Cowley’s research while affiliated with University of New England and other places

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Publications (43)


The effects and toxicological mechanisms of leucaena toxicity on ruminant reproduction: a review
  • Literature Review

April 2025

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4 Reads

Toxicon

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Michael J. Halliday

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Frances C. Cowley

Evaluation of methane prediction equations for Australian feedlot cattle fed barley and wheat-based diets

March 2025

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8 Reads

Context Accurately predicting baseline methane (CH4) emissions from beef cattle is of utmost importance for the beef industry and governments alike. It serves as a vital component for accounting as part of national GHG inventories and enables the development and implementation of greenhouse gas (GHG) mitigation strategies. Aims The aim of this study was to evaluate equations in the literature for predicting CH4 emissions of beef cattle when fed barley and wheat-based diets typical of the Australian feedlot industry. Then, propose the best prediction equation to accurately reflect CH4 emissions of feedlot cattle under Australian conditions. Methods As part of the project, a large database of methane measurements performed in respiratory calorimeters taken from beef cattle fed a range of feedlot diets was assembled. The dataset included a wide range of factors that are known to impact CH4 production, such as dry matter intake (DMI), ether extract (EE), crude protein (CP), and cell wall components, amongst others. The database contained 713 individual measurements, from 175 animals and 12 studies. Key results The equation currently utilised by the Australian National Inventory Report had poor accuracy, with mean bias overprediction of 115 g/day (P < 0.01), along with significant linear bias (P < 0.01) and poor precision (r2 = 0.05). The mean bias was 144% of average observed CH4 production. All evaluated equations lacked accuracy and precision in predicting CH4 emissions for the diets fed in this study. Roughage concentrations (DM basis) ranged from 5.54 to 43.0% with a mean of 20.5 ± 11.1%. Given these findings, two specific equations were developed, (1) a CH4 yield equation based on DMI: CH4 (g/day) = 9.89 ± 1.54 × DMI (n = 384; P < 0.01; root mean square error (RMSE) = 32.6 g/day; r2 = 0.85); and (2) an equation based on DMI, neutral detergent fibre (NDF) and EE: CH4 (g/day) = 5.11 ± 1.58 × DMI − 4.00 ± 0.821 × EE + 2.26 ± 0.125 × NDF (n = 384; P < 0.05; RMSE = 22.2 g/day; r2 = 0.91). When validated, the second equation yielded a mean bias of 6.10 g overprediction, with no linear bias, and better fit than any of the literature equations. Conclusions Based on a thorough model evaluation, our findings support the need to revise current methods to predict CH4 for barley and wheat-based diets. Implications This study contributes to developing accurate estimations of enteric CH4 emissions for cattle fed barley and wheat-based diets.



Stocking density in intensive housing and the implications for beef cattle behavior, stress physiology, and liveweight

February 2025

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17 Reads

Journal of Animal Science

Stocking density can potentially impact cattle welfare during livestock export voyages. The aim of this study was to assess selected measures that reflect the welfare of cattle housed at three allometric stocking densities (k = 0.027, 0.030, 0.047). Bos indicus cross Bos taurus steers were housed in 12 pens, each with 5 steers, for 10 days. Scan sampling of standing and lying behaviours were conducted on d 2, 5, 7 and 9, at hourly intervals. Continuous observations were conducted on the same days between 1030 and 1130 h, to count aggressive interactions. Liveweights were recorded at the start of the study, and on d 6 and d 10. For a subset of focal steers (3 per pen), white blood cell counts, and faecal glucocorticoid metabolite (FGCM) concentrations were assessed on days 0, 6 and 10. More pen space led to a small increase in the number of steers lying, as well as a small increase in lying synchronicity. Results also indicated that the number of cattle lying in isolation from conspecifics is higher when more space is available. More pen space also resulted in more steers lying with outstretched legs on days 2 and 5, but there was no evidence of this after day 5. Stocking density had no important effect on day 6 or 10 liveweights or FGCM concentrations. Only small decreases in total white blood cell and lymphocyte counts between days 6 and 10 were observed, as well as small increases in neutrophil counts and the neutrophil to lymphocyte ratio, but all mean counts still fell within reference intervals for healthy cattle. The lack of important effects on stress physiology and liveweight suggests that the cost of attempting to adapt to pen space restriction was relatively low, leading to behavioural responses only. Results for lying behaviours also suggest that additional pen space may facilitate adaptation upon introduction to a new housing environment and is beneficial in facilitating the expression of some lying behaviours. While designed to emulate stocking densities applicable to Australian cattle export voyages, other environmental factors that may induce stress during these voyages were not present, and so the conclusions must be interpreted in the context of the controlled experimental conditions.



Effect of bedding application and air change rates on environmental ammonia concentrations for intensively housed beef cattle
  • Article
  • Full-text available

October 2024

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22 Reads

Context Manure deposition during livestock export voyages contributes to air ammonia levels, potentially affecting human and animal health if not managed. Mitigation strategies may include increased air change rates and application of bedding. Aim This study examined the effect of bedding application rate (BAR) and air change rate (ACH) on air ammonia (NH3) concentrations and pad properties, including pad surface condition, pH, moisture, and pad ammonium (NH4⁺) concentrations, for intensively housed beef cattle. Methods Six 7-day runs were conducted with 72 Bos indicus cross steers (mean liveweight ± s.d. = 338 ± 32 kg) housed in respiration chambers by using a 3 × 3 factorial design. The BARs were set to 0%, 50%, and 100% of the Australian Standards for the Export of Livestock (ASEL), and ACH were varied at 20, 35, and 52. Air NH3 was measured twice daily at three heights. Pad surface condition was collected with the first air NH3 measurement. Video footage captured standing and lying behaviours for each steer. Pad samples were collected on the final day for pad chemical analysis. Key results The ACH of 20 changes per hour resulted in higher air NH3 concentration than ACH of 35 and 52. Higher BAR led to lower pad pH and moisture, with slightly lower pad NH4⁺ concentration in 100% and 50% BAR than 0% BAR. Although air NH3 concentration on Day 7 was positively correlated with pad NH4⁺ concentration, BAR had no marked effect on air NH3 concentration (within the temperature range of this experiment). Drier and firmer pad surfaces were associated with each high BAR and high ACH. Moreover, high BAR increased the frequency of lying behaviour in steers. Conclusions These findings indicated that NH3 can be mitigated by optimising air changes to minimise air NH3 concentration and utilising bedding to minimise pad NH4⁺. This offers practical solutions for intensively housed beef cattle, such as livestock export voyages to improve human and animal welfare onboard. Implications The study results emphasised the importance of optimising ACH to maintain low air NH3 concentrations in livestock export conditions. Although there was no evidence that BAR affects air NH3 directly, it reduced pad NH4⁺ and improved pad conditions for overall animal comfort and environmental quality in confined housing with sufficient air changes.

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Bioactive metabolites of Asparagopsis stabilized in canola oil completely suppress methane emissions in beef cattle fed a feedlot diet

April 2024

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89 Reads

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10 Citations

Journal of Animal Science

Asparagopsis taxiformis (Asparagopsis) has been shown to be highly efficacious at inhibiting the production of methane (CH4) in ruminants. To date, Asparagopsis has been primarily produced as a dietary supplement by freeze-drying to retain the volatile bioactive compound bromoform (CHBr3) in the product. Steeping of Asparagopsis bioactive compounds into a vegetable oil carrier (Asp-Oil) is an alternative method of stabilizing Asparagopsis as a ruminant feed additive. A dose–response experimental design used 3 Asp-Oil-canola oil blends, low, medium, and high Asp-Oil which provided 17, 34, and 51 mg Asparagopsis derived CHBr3/kg dry matter intake (DMI), respectively (in addition to a zero CHBr3 canola oil control), in a tempered-barley based feedlot finisher diet, fed for 59 d to 20 Angus heifers (five replicates per treatment). On four occasions, live weight was measured and CH4 emissions were quantified in respiration chambers, and blood, rumen fluid, and fecal samples were collected. At the end of the experiment, all animals were slaughtered, with carcasses graded, and samples of meat and edible offal collected for testing of consumer sensory qualities and residues of CHBr3, bromide, and iodide. All Asp-Oil treatments reduced CH4 yield (g CH4/kg DMI, P = 0.008) from control levels, with the low, medium, and high Asp-Oil achieving 64%, 98%, and 99% reduction, respectively. Dissolved hydrogen increased linearly with increasing Asp-Oil inclusion, by more than 17-fold in the high Asp-Oil group (P = 0.017). There was no effect of Asp-Oil treatment on rumen temperature, pH, reduction potential, volatile fatty acid and ammonia production, rumen pathology, and histopathology (P > 0.10). There were no differences in animal production and carcass parameters (P > 0.10). There was no detectable CHBr3 in feces or any carcass samples (P > 0.10), and iodide and bromide residues in kidneys were at levels unlikely to lead to consumers exceeding recommended maximum intakes. Overall, Asp-Oil was found to be safe for animals and consumers of meat, and effective at reducing CH4 emissions and yield by up to 99% within the range of inclusion levels tested.




Recent Advances in Animal Nutrition – Australia 2023

December 2023

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43 Reads

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1 Citation

The Biennial Conference of Recent Advances in Animal Nutrition – Australia was held on 27–28 July 2023. The special issue contains latest research in the field of animal nutrition across the most economically significant animal species, including poultry, pigs, sheep, cattle, companion animals and aquaculture.


Citations (26)


... Hasil penelitian ini menunjukkan bahwa sistem usaha ternak sapi yang dijalankan oleh petani di Pulau Lombok adalah sistem peternakan tradisional. Salah satu ciri peternakan tradisional adalah kepemilikan ternak dengan skala kecil yakni kurang dari 10 ekor per kepala keluarga petani [6,7,1]. Mayoritas petani memelihara sapi dengan tujuan penggemukan. ...

Reference:

Tingkat Pemanfaatan Lamtoro Sebagai Pakan Ternak Sapi oleh Petani di Pulau Lombok
The role of leucaena in cattle fattening and breeding production systems in eastern Indonesia

... Knight et al. (2011) reported that CH 4 emissions in non-lactating dairy cows initially decreased but returned to 62% of pretreatment levels by day 42 of treatment when using chloroform. The persistence of the efficacy of Rumin8 oil IVP over the course of the experiment ( Figure 2) aligns with findings from Roque et al. (2021) and Cowley et al. (2024), both of which tested Asparagopsis taxiformis and showed similar results. However, Cowley et al. (2024) reported that low-dose groups (17 mg CHBr 3 /kg DMI) experienced a resurgence in CH 4 production and yield after day 12, with no significant difference from the control by day 56, suggesting rumen microbiome adaptation to low CHBr 3 levels. ...

Bioactive metabolites of Asparagopsis stabilized in canola oil completely suppress methane emissions in beef cattle fed a feedlot diet
  • Citing Article
  • April 2024

Journal of Animal Science

... Despite this, the odds of steers lying on Days 3 and 6 were still higher where bedding was provided (50% and 100% ASEL); however, the reduced strengths of association between BAR and lying frequency later in the study period were presumably due to increased pad moisture over time. These results support those of the previous studies in that cattle prefer to lie down on clean, dry, and uncontaminated bedding (Crafter et al. 2006;Tucker et al. 2009;O'Connor et al. 2019;Tait et al. 2023). ...

Effect of woodchip bedding during wet conditions on feedlot cattle productivity, behaviour and relative adrenal gland weight
  • Citing Article
  • November 2023

animal

... The researchers determined a 53.85% decrease in CH 4 emission generated from manure after turning or windrow composting manure. Almeida et al. [17] argue for increased efficiency and production by triggering early puberty in breeding cows and reducing the post-weaning phase and associated feeding and emissions generated during non-productive times. Lean and Moate [20] found that providing ozonated water to cattle could reduce CH 4 by 20%. ...

A regional-scale assessment of nutritional-system strategies for abatement of enteric methane from grazing livestock

... Pitta et al. (2022) found that 3-NOP increased the gene expression of an enzyme associated with butyrate formation from acetate, suggesting that butyrate synthesis may be an alternative pathway for [2H] under inhibited methanogenesis by 3-NOP. Inclusion rates offered typically vary from 60 to 150 mg/kg DM, with linear CH 4 reductions reported up to 100 mg/kg DM (Almeida et al., 2023). On average, 3-NOP reduces CH 4 production, yield and intensity by 32.7, 30.9 and 32.6%, when incorporated in a TMR diet at 70.5 mg/kg DM . ...

Effect of 3-nitrooxypropanol on enteric methane emissions of feedlot cattle fed a tempered barley-based diet with canola oil

Journal of Animal Science

... Eructated methane from ruminal microbial fermentation not only contributes to global warming but also wastes energy, reducing feed efficiency [74]. Given the microbiome's crucial role in methane production, strategies to mitigate emissions in ruminants primarily target dietary interventions that alter rumen conditions and microbial ecology [75][76][77]. Our findings suggest a novel association between prenatal nutrition and methane metabolism pathways in the offspring's ruminal microbiome. ...

The effects of antibiotic-free supplementation on the ruminal pH variability and methane emissions of beef cattle under the challenge of subacute ruminal acidosis (SARA)
  • Citing Article
  • May 2023

Research in Veterinary Science

... Low-density High-density active in the feedlot at high densities. In housed animals, the space available can influence activity [25] and, possibly, the reduction in time spent moving is caused by the proximity of conspecifics and the limitations on movement [26]. In addition, however, the high density (preceded by social mixing, transport, handling) might have caused an increased stress response and fatigue, which might have reduced the animals' motivation to move [27]. ...

Stocking density, restricted trough space, and implications for sheep behaviour and biological functioning

... Bedding on livestock export vessels is mainly utilised as an absorption agent for animal faeces and urine (McCarthy and Banhazi 2016). Bedding may also improve pad condition by reducing the penetrable depth and moisture of the pad (Wilkes et al. 2022) and support animal comfort as measured by lying time and number of lying bouts throughout the day ). Current Australian Standards for the Export of Livestock ver. ...

Physical and chemical characteristics of feedlot pen substrate bedded with woodchip under wet climatic conditions

The Journal of Agricultural Science

... Oil palm land also has a very large contribution to the development of livestock, especially ruminants because plants growing beneath the canopy are a potential source of feed and also suitable for grazing [4] [5]. The integrated system of cattle palm is not only beneficial for livestock because of the availability of feed, but the integrated system also has a considerable contribution to lower wedding expenses because cattle can be used as 'bio lawn mowers' and also improved soil quality due to manure return [6]. [7]. ...

Prospects and problems: considerations for smallholder cattle grazing in oil palm plantations in South Kalimantan, Indonesia

Agroforestry Systems

... Meat quality is generally described in terms of aesthetic, tactile, masticatory, functional, nutritional, health, convenience, and environmental impact attributes [1]. Each of these features of meat quality can be affected by the methods employed before, during, and after slaughter [19,92]. Extensive research has been performed to dissect the nuances of the impact of a procedure on meat quality at all stages (before, during, and after slaughter), and how to assess their impact physiologically, biologically, and, ultimately, by taste [19,93,94]. ...

Feedlot Factors Influencing the Incidence of Dark Cutting in Australian Grain-Fed Beef