Elena Stekolshchikova’s research while affiliated with Skolkovo Institute of Science and Technology and other places

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Publications (30)


No major effect of mental health diagnosis (schizophrenia, bipolar disorder, healthy control) as a covariate in regression model on significance of PE class for the DG-SYM test in lipid class-based enrichment analysis in lipidR
Distribution of log fold change (logFC) per lipid class, with significantly enriched classes (marked in red) for mean-based low (as seen in the plots) versus high results in the dataset including all individuals with schizophrenia, bipolar disorder, and healthy controls (sample size: 531 individuals). PE: phosphatidylethanolamine; DG-SYM: Digit-Symbol test.
Lipid class-based enrichment analysis in LipidR for different cognitive tests
Distribution of log fold change (logFC) per lipid class, with significantly enriched classes (marked in red) for mean-based low (as seen in the plots) versus high cognitive tests results in the full dataset with the effect of covariates. TMT-A, Trail-Making Test part A; TMT-B, Trail-Making Test part B; DGT-SP-FRW, Verbal Digit Span forward; DGT-SP-BCK, Verbal Digit Span backward; DG-SYM, Digit-Symbol; MWT-B, Multiple-choice Vocabulary Intelligence.
Investigating the association of the plasma lipidomic profile with cognitive performance and genetic risk in the PsyCourse study
  • Article
  • Full-text available

March 2025

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64 Reads

Translational Psychiatry

Mojtaba Oraki Kohshour

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Anna Tkachev

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Although lipid biology may play a key role in the pathophysiology of mental health disorders such as schizophrenia (SCZ) and bipolar disorder (BD), the nature of this interplay and how it could shape phenotypic presentation, including cognitive performance is still incompletely understood. To address this question, we analyzed the association of plasma level of different lipid species with cognitive performance in the transdiagnostic PsyCourse Study. Plasma lipidomic profiles of 623 individuals (188 SCZ, 243 BD, 192 healthy controls) belonging to the PsyCourse Study were assessed using liquid chromatography and untargeted mass spectrometry. The association between 364 annotated lipid species from 16 lipid classes and six cognitive tests was evaluated. Likewise, the association of polygenic risk scores (PRS) for SCZ, BD, executive function (EF), and educational attainment (EA) with lipid plasma levels were also investigated. In the regression analysis, three lipid species belonging to phosphatidylethanolamine plasmalogen and one belonging to ceramide class showed significant negative association with Digit-Symbol test scores. Lipid class-based enrichment analysis in LipidR replicated the significance of the phosphatidylethanolamines class for the Digit-Symbol test, which evaluates the processing speed in cognitive tasks. Polygenic load for SCZ, BD, EF, or EA was not associated with lipid levels. Our findings suggest a link between lipids and cognitive performance independent of mental health disorders. Still, independent replication is warranted to better understand if phosphatidylethanolamines could represent an actionable pharmacologic target to tackle cognitive dysfunction, an important unmet clinical need that affects long-term functional outcomes in individuals with severe mental health disorders.

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Brain regions explored in this study. (A) Unstained brain section with an outline of three analyzed regions. (B) Histological staining of an adjacent brain section by Nissl stain. (C) Result of unsupervised clustering of section pixels based on MALDI‐MSI signal intensity. (D) Distribution of intensity levels across section pixels for MALDI‐MSI peaks in positive mode showing region‐specific patterns. Upper row: Peaks showing high intensity in neocortical gray matter; second row: Peaks showing high intensity in both white matter regions; two bottom rows: Peaks showing intensity difference between cingulum bundle and corpus callosum white matter regions. M/z values on top of each plot indicate peaks' mass to charge value.
Lipidome variation among brain regions assessed using MALDI‐MSI. (A) Visualization of lipidome‐based distances between corpus callosum, cingulum bundle and gray matter samples using PCA. Colors mark brain regions. Each symbol corresponds to a single MALDI‐MSI image pixel. (B) Comparison of the lipid signal intensity differences detected between white and gray matter regions in our MALDI‐MSI experiment and reported by previous studies. Data is shown for lipids with annotation confirmed using MS/MS measurements in the MALDI‐MSI experiment. Color indicates a direction of the difference: Red—lipids with higher intensity in white matter; blue—lipids with higher intensity in gray matter. Asterisks mark differences significant in our MALDI‐MSI analysis. (C) Volcano plots visualizing the statistical analysis results of region‐associated lipid intensity alterations between all pairs of the three analyzed brain regions. Results are combined from both positive and negative modes. Significant differences (paired two‐sided Student's test, Benjamini‐Hochberg corrected p‐value < 0.05, n = 6, n—number of donors in each group, f = 5, f—degrees of freedom) are marked by larger dots. The pale shade of dots represents lipids annotated with their exact mass in MALDI‐MSI experiment. The dark green shade indicates lipids that have been annotated with exact mass in MALDI‐MSI experiment and confirmed using UPLC‐MS/MS. The lighter green shade highlights lipids whose annotation has been validated through MALDI‐MS/MS.
Verification of MALDI‐MSI detected differences using HPLC‐MS. (A) A schematic representation UPLC‐MS/MS analysis. (B) Numbers of lipid compounds detected and annotated in UPLC‐MS/MS experiment in each lipid class. (C) Correlations of lipid intensity differences between brain regions, displayed as log2‐transformed fold change, obtained in the MALDI‐MSI and UPLC‐MS/MS experiments. Results are combined from both positive and negative modes. Colors indicate lipids matched between the experiments based on their molecular ion m/z values (dark green) and lipids matched between the experiments using MALDI‐MS/MS‐based annotation (light green). Larger symbols indicate lipids significantly different between regions in the MALDI‐MSI experiment.
Lipidome variation among brain regions assessed using UPLC‐MS. (A–C) Biochemical characteristics of the lipid intensity differences between cingulum bundle and corpus callosum. The panels show the distribution of the lipid intensity differences sorted by class (A), fatty acid residue length (B), and fatty acid residue type (C). Asterisk in pictures with boxplots indicates *p < 0.05, **p < 0.01, ***p < 0.001 and ****p < 0.0001 in one‐sided Student's t test (mu = 0, number of objects ≥ 3 for each comparison). p‐values are adjusted with Benjamini‐Hochberg method. (D–E) Biochemical characteristics of the lipid intensity differences between white and gray matter regions. The panels show the distribution of the lipid intensity differences sorted by class (D), fatty acid residue saturation (E). Classes and levels of unsaturation that are significantly increased or decreased in both white matter regions are marked with; classes and levels of unsaturation that are significantly increased or decreased in just one of white matter regions are marked with (one‐sided Student's t test, mu = 0, number of objects ≥ 3 for each comparison, level of significance p‐value = 0.05, p‐values are adjusted with Benjamini‐Hochberg method). Numbers in square brackets indicate references to literary sources where the same effect was described.
Lipid Composition Diversity of the Human Brain White Matter Tracts

Understanding the molecular basis of the structural organization of the human brain may shed light on its functional mechanism. We present spatial lipidomics analysis of human brain sections containing neocortical gray matter and two white matter regions representing two axonal tracks: the cingulum bundle and the corpus callosum. Using matrix‐assisted laser desorption/ionization mass spectrometry imaging (MALDI‐MSI) we identify lipid composition differences not only between gray and white matter but also between two axonal tracks. Results, obtained with the MALDI‐MSI method, correlated with ultra‐performance liquid chromatography–tandem mass spectrometry (UPLC‐MS/MS) analysis of these brain regions, with Spearman's correlation coefficient equal to 0.48 (the cingulum bundle vs. gray matter), 0.47 (the corpus callosum vs. gray matter), 0.33 (the cingulum bundle vs. the corpos callosum) on 75 lipids annotated in both experiments. Using UPLC‐MS/MS analysis, we further identified specific lipid classes that distinguished the two white matter regions (CL, PG, LPE), while gray and white matter comparison yielded well‐established differences in lipid composition between myelin‐rich and myelin poor regions (CL, DG, Cholesterol). Our findings highlight the significance of in‐depth molecular analysis of brain regions and enhance our comprehension of the brain's molecular composition. image


White matter lipidome alterations in the schizophrenia brain

December 2024

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99 Reads

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1 Citation

Schizophrenia

Numerous brain imaging studies have reported white matter alterations in schizophrenia, but the lipidome analysis of the corresponding tissue remains incomplete. In this study, we investigated the lipidome composition of six subcortical white matter regions corresponding to major axonal tracks in both control subjects and schizophrenia patients. All six regions exhibited a consistent pattern of quantitative lipidome alterations in schizophrenia, involving myelin-forming and mitochondria associated lipid classes. While alteration levels of myelin-forming lipids, particularly sphingolipids, aligned with the extent of the myelin changes reported in structural brain imaging studies, a significant decrease of mitochondria in the white matter, indicated by the lipidome alterations, was not previously investigated. To verify this effect, we performed lipidome analysis in a larger set of individuals and in the mitochondria-enriched membrane fraction, as well as directly quantified mitochondrial content. Our results suggest a substantial reduction of the mitochondrial quotient accompanied by the imbalance in myelin lipids in schizophrenia white matter.



Fig. 1: Demographic and mental health characteristics of the volunteer cohort (n = 604). (a) The age and sex distribution among the volunteers in the cohort. (b) The distribution of self-reported anxiety (HADS-A) and depression (HADS-D) symptom scores among the individuals in the cohort. Colours indicate severity of symptoms: green represents no or mild symptoms (0-10) on both scales, brown represent moderate or severe symptoms (≥11) on one of the scales, and blue indicates moderate or severe symptoms (≥11) on both scales. Colour intensity is proportional to the number of individuals having the respective scores. Pearson correlation coefficient and p-value is indicated on the plot. (c) The co-dependency among demographic factors and self-reported clinical indicators. The numbers depicted represent the percentage of variation (R 2 ) explained for a specific variable by another variable, as determined by linear regression model analysis.
Fig. 2: Lipidome associations with HADS-A and HADS-D scores. (a) The measured lipid classes and the number of species in each one. CAR indicates acylcarnitine; CE, cholesteryl ester; DAG, diacylglycerol; TAG, triglyceride; Cer, ceramide; SM, sphingomyelin; PE, phosphatidylethanolamine; PE P-, plasmanyl/plasmenyl phosphatidylethanolamine; LPE, lysophosphatidylethanolamine; PC, phosphatidylcholine; PC O-, plasmanyl/plasmenyl phosphatidylcholine; LPC, lysophosphatidylcholine; LPC-O, lyso plasmanyl/plasmenyl phosphatidylcholine; PI, phosphatidylinositol. (b) p-value (top) and q-value (FDR-corrected p-value, bottom) distributions for the Pearson correlation analysis between abundances of lipids and HADS-A or HADS-D scores (n = 604). Dotted line separates 10% FDR threshold, and the eight lipids significantly associated with HADS-D are coloured in dark blue. (c) For lipids significantly associated with HADS-D scores, the distribution by lipid classes. (d) For lipids significantly associated with HADS-D scores, the double bond index distribution (purple) compared to other lipids (grey). Double bond index was defined as the number of double bonds divided by the number of side chains in the lipid structure.
Fig. 3: Congruence of lipidome alterations in volunteer cohort and clinical depression patients. (a) Age and sex distribution for the dataset of patients with clinical depression (n = 32). (b) Relationship between the association of HADS-D and lipid abundances (Pearson correlation coefficients) and alterations in lipid abundances in clinical depression (mean base-2 log transformed fold-changes between clinical depression and the volunteer cohort). Spearman correlation coefficient and p-value of the relationship is indicated on the corresponding plots (n = 186 lipids). Top left: all lipids; bottom left: all lipids without triglycerides; top right: ether phospholipids are highlighted in colour (PC O-, PE P-, LPC O-, shades correspond to Fig. 2a); bottom right: triglycerides are highlighted in colour, the shades indicate the total number of double bonds.
Fig. 4: Predictive modelling for the detection of individuals with high HADS-D scores. (a) Boxplots illustrating the randomized cross-validation accuracy and ROC AUC values of the model separating clinical depression from healthy controls (n = 32 and n = 36, respectively). Standard boxplot definition was used for illustration (the box extends from the first quartile to the third quartile of the data, with a line at the median; the whiskers extend from the box to the farthest data point lying within 1.5x of the inter-quartile range from the box). (b) The relationship between volunteers' HADS-D values and their predicted scores derived from the model trained on clinical depression patients versus controls (c and p on the top: Spearman correlation coefficients and p-values, n = 589, excluding 15 volunteer individuals used in model training). Individual predictions are represented by coloured points, with mean predicted scores for each HADS-D value represented by larger circles (c and p below: Pearson correlation coefficients and p-values for averaged prediction scores across discrete HADS-D values, n = 16). Light green illustrates volunteers with no or mild symptoms (HADS-D = 0-10), dark green illustrates those with moderate to severe symptoms (HADS-D ≥ 11), and teal blue symbols on the right illustrate clinical depression patients. (c) Top: the number of individuals with specific HADS-D scores. Bottom: ROC AUC values of the model performance in distinguishing individuals with the specific HADS-D scores (dark olive), as well as clinical depression (teal blue), from those without depressive symptoms (HADS-D ≤ 7). (d) Depression probability scores generated by the model for volunteers with no or mild symptoms (HADS-D ≤ 10), those with severe self-reported depression (HADS-D ≥ 15), and hospitalized patients with clinical depression. Individual predictions are represented by coloured points, while the predicted scores averaged in each group are illustrated by larger outlined circles. For the group of volunteers with severe depressive symptom, red indicates those on prescribed antidepressants, blue indicates non-medicated individuals, and olive represents those with unconfirmed medication status.
Screening for depression in the general population through lipid biomarkers

November 2024

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39 Reads

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4 Citations

EBioMedicine

Background Anxiety and depression significantly contribute to the overall burden of mental disorders, with depression being one of the leading causes of disability. Despite this, no biochemical test has been implemented for the diagnosis of these mental disorders, while recent studies have highlighted lipids as potential biomarkers. Methods Using a streamlined high-throughput lipidome analysis method, direct-infusion mass spectrometry, we evaluated blood plasma lipid levels in 604 individuals from a general urban population and analysed their association with self-reported anxiety and depression symptoms. We also assessed lipidome profiles in 32 patients with clinical depression, matched to 21 healthy controls. Findings We found a significant correlation between lipid abundances and the severity of self-reported depression symptoms. Moreover, lipid alterations detected in high scoring volunteers mirrored the lipidome profiles identified in patients with clinical depression included in our study. Based on these findings, we developed a lipid-based predictive model distinguishing individuals reporting severe depressive symptoms from non-depressed subjects with high accuracy. Interpretation This study demonstrates the possibility of generalizing lipid alterations from a clinical cohort to the general population and underscores the potential of lipid-based biomarkers in assessing depressive states. Funding This study was sponsored by the Moscow Center for Innovative Technologies in Healthcare, №2707-2, №2102-11.



Lipidome atlas of the adult human brain

May 2024

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252 Reads

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34 Citations

Lipids are the most abundant but poorly explored components of the human brain. Here, we present a lipidome map of the human brain comprising 75 regions, including 52 neocortical ones. The lipidome composition varies greatly among the brain regions, affecting 93% of the 419 analyzed lipids. These differences reflect the brain’s structural characteristics, such as myelin content (345 lipids) and cell type composition (353 lipids), but also functional traits: functional connectivity (76 lipids) and information processing hierarchy (60 lipids). Combining lipid composition and mRNA expression data further enhances functional connectivity association. Biochemically, lipids linked with structural and functional brain features display distinct lipid class distribution, unsaturation extent, and prevalence of omega-3 and omega-6 fatty acid residues. We verified our conclusions by parallel analysis of three adult macaque brains, targeted analysis of 216 lipids, mass spectrometry imaging, and lipidome assessment of sorted murine neurons.


Figure 1. Brain regions and lipid classes explored in this study. (A) A schematic representation of the anatomical locations of the six white matter regions analyzed in our study. (B) The scheme for white matter lipidome analysis experiment. (C) The numbers of lipid compounds detected in our study, with annotation confirmed by fragment spectra in DDA analysis, sorted according to lipid class annotation. Colors indicate lipid structural categories.
Figure 2. Characteristics of white matter lipidome alterations in schizophrenia. (A) Visualization of lipidome-based distances between white matter samples using PCA. Colors distinguish schizophrenia (SZ) and control (HC) samples. (B) A volcano plot visualizing the results of a statistical analysis of schizophrenia-associated alterations in white matter. Significant changes (ANOVA, BH-corrected p < 0.05) are color-coded according to lipid categories. (C) Correlation between schizophrenia-associated lipid alterations in corpus callosum documented in our study and in a study by Shimamoto et al[48]. Colors denote lipid categories as in panel B. (D) Distributions of schizophrenia-associated alterations, represented as log2-transformed lipid abundance differences between schizophrenia and control samples (log2 fold change), in each assessed lipid class. Colors highlight lipid classes with an overall abundance significantly increased (red) or decreased (blue) in schizophrenia (hypergeometric test, BH-corrected p < 0.05). (E) Schizophrenia-associated effects on the composition of lipids' fatty acid residues. In this panel and in panel F, symbols mark combinations of chain length and unsaturation extent present in at least five detected lipid compounds. Colors display the average log2 fold change calculated based on six white matter regions. (F) The relationship between relative unsaturation, calculated as the ratio between the number of double bonds in a residue and the maximum number of double bonds for a residue of this length detected in our study, and the corresponding change in lipid abundance in schizophrenia.
Figure 4. Relationship between the extent of schizophrenia-associated lipidome alterations in six white matter regions and anatomical changes reported by sMRI studies. (A-B) Distribution of the Pearson correlation coefficients for the comparisons between schizophrenia-associated lipid alterations represented by Cohen's d values and sMRI schizophrenia-associated signal changes detected using T1/T2 (A) or DTI (B) protocols. Distributions include all detected lipids. Colors indicate lipid categories. Vertical dashed lines mark the average correlation value of a distribution. The sterol category, represented by fewer than five lipid compounds detected in our study, is not shown. (C) Relationship between correlations of lipid class alterations and structural brain alterations measured using either T1/T2 or DTI protocols. Symbols mark average Pearson correlation values calculated within each lipid class. Colors indicate lipid categories. (D) Relationship between the length of sphingolipids' fatty acid residues and the correlation of their schizophrenia-associated abundance alterations with sMRI signal. Symbols show the average correlation coefficients of all lipids in a class of a given length with T1/T2 signal (squares) or with DTI signal (circles).
White matter lipidome alterations in the schizophrenia brain

November 2023

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308 Reads

Numerous brain imaging studies have reported white matter alterations in schizophrenia, but the lipidome analysis of the corresponding tissue remains incomplete. In this study, we investigated the lipidome composition of six subcortical white matter regions corresponding to major axonal tracks in both control subjects and schizophrenia patients. All six regions exhibited a consistent pattern of quantitative lipidome alterations in schizophrenia, affecting specific lipid classes. These alterations partly involved myelin-forming lipid classes, particularly sphingolipids, with the extent of alterations reflecting the myelin changes previously reported in structural brain imaging studies. The other part of the schizophrenia-associated alterations, which showed a significant decrease in the disorder, involved lipid classes abundant in mitochondria. A similar significant decrease was also observed in the mitochondria-enriched membrane fraction isolated from the white matter of individuals with schizophrenia. This suggests a substantial reduction in the number of mitochondria in subcortical white matter in schizophrenia, a hypothesis supported by quantitative mitochondria staining.



Figure 2. Schizophrenia (SCZ)-Associated Lipidome Alterations and Classification Modeling
Figure 3. Comparison of the Blood Plasma Lipidome Alterations Among 3 Psychiatric Disorders
Lipid Alteration Signature in the Blood Plasma of Individuals With Schizophrenia, Depression, and Bipolar Disorder

January 2023

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298 Reads

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29 Citations

JAMA Psychiatry

Importance: No clinically applicable diagnostic test exists for severe mental disorders. Lipids harbor potential as disease markers. Objective: To define a reproducible profile of lipid alterations in the blood plasma of patients with schizophrenia (SCZ) independent of demographic and environmental variables and to investigate its specificity in association with other psychiatric disorders, ie, major depressive disorder (MDD) and bipolar disorder (BPD). Design, setting, and participants: This was a multicohort case-control diagnostic analysis involving plasma samples from psychiatric patients and control individuals collected between July 17, 2009, and May 18, 2018. Study participants were recruited as consecutive and volunteer samples at multiple inpatient and outpatient mental health hospitals in Western Europe (Germany and Austria [DE-AT]), China (CN), and Russia (RU). Individuals with DSM-IV or International Statistical Classification of Diseases and Related Health Problems, Tenth Revision diagnoses of SCZ, MDD, BPD, or a first psychotic episode, as well as age- and sex-matched healthy controls without a mental health-related diagnosis were included in the study. Samples and data were analyzed from January 2018 to September 2020. Main outcomes and measures: Plasma lipidome composition was assessed using liquid chromatography coupled with untargeted mass spectrometry. Results: Blood lipid levels were assessed in 980 individuals (mean [SD] age, 36 [13] years; 510 male individuals [52%]) diagnosed with SCZ, BPD, MDD, or those with a first psychotic episode and in 572 controls (mean [SD] age, 34 [13] years; 323 male individuals [56%]). A total of 77 lipids were found to be significantly altered between those with SCZ (n = 436) and controls (n = 478) in all 3 sample cohorts. Alterations were consistent between cohorts (CN and RU: [Pearson correlation] r = 0.75; DE-AT and CN: r = 0.78; DE-AT and RU: r = 0.82; P < 10-38). A lipid-based predictive model separated patients with SCZ from controls with high diagnostic ability (area under the receiver operating characteristic curve = 0.86-0.95). Lipidome alterations in BPD and MDD, assessed in 184 and 256 individuals, respectively, were found to be similar to those of SCZ (BPD: r = 0.89; MDD: r = 0.92; P < 10-79). Assessment of detected alterations in individuals with a first psychotic episode, as well as patients with SCZ not receiving medication, demonstrated only limited association with medication restricted to particular lipids. Conclusions and relevance: In this study, SCZ was accompanied by a reproducible profile of plasma lipidome alterations, not associated with symptom severity, medication, and demographic and environmental variables, and largely shared with BPD and MDD. This lipid alteration signature may represent a trait marker of severe psychiatric disorders, indicating its potential to be transformed into a clinically applicable testing procedure.


Citations (20)


... Although previous studies had detected a few [7] or no [22] [24][25][26][27]. The decrease in the levels of phosphatidylglycerols might reflect mitochondrial dysfunction, which has also been linked to schizophrenia [23]. Interestingly, elevated levels of triacylglycerides have been designated as biomarkers of schizophrenia with elevated levels in the blood [28,29]. ...

Reference:

Comparative Analysis of Corpus Callosum Lipidome and Transcriptome in Schizophrenia and Healthy Brain
White matter lipidome alterations in the schizophrenia brain

Schizophrenia

... Several studies have examined the relationships between depressive symptoms and physical health indicators and symptoms; most of these studies have reported significant relationships. More specifically, indicators include body mass index (BMI), waist-to-hip ratio, blood pressure, lung capacity measured by Forced Expiratory volume (FEV1) and Forced Vital Capacity (FVC), heart rate, and lipid profile [11,12,[16][17][18][19][20]. Also, several systematic reviews and meta-analysis studies have explored the relationship between depression and comorbidities or chronic illnesses such as cardiovascular diseases, diabetes mellitus, chronic obstructive pulmonary disease, stroke, arthritis, cancer, and Parkinson's disease [21][22][23][24][25]. ...

Screening for depression in the general population through lipid biomarkers

EBioMedicine

... MDA-MB-231 cells were transfected with lentiviral vectors pLVX-shRNA1 (Clontech Laboratories, United States) with shRNA to the IGFBP6 gene (MDA-MB-231 IGFBP6 cell line) and control shRNA to the luciferase gene of the firefly Photinus pyralis (MDA-MB-231 luc cell line) [8]. MDA-MB-231 luc and MDA-MB-231 IGFBP6 cells were cultured in 25-cm 2 culture flasks (Corning, United States) at 37°C with 5% CO 2 in DMEM/F12 medium (Gibco, United States) supplemented with penicillin and streptomycin (PanEco, Russia) to a final concentration of 100 U/mL and 100 μg/mL, respectively (PanEco, Russia), 10% FBS (HyClone, United States), and 1% GlutaMAX TM (Gibco, United States). ...

IGFBP6 regulates extracellular vesicles formation via cholesterol abundance in MDA-MB-231 cells
  • Citing Article
  • June 2024

Biochimie

... The need for ATP synthesis consequently increases ROS production, which can lead to damage to vital biomolecules. Furthermore, it is important to note that the lipid composition of brain tissues is distinct from that of other body tissues, featuring relatively high levels of polyunsaturated fatty acids (PUFAs), which are particularly vulnerable to oxidative damage [25,26]. Thus, the maintenance of ROS homeostasis in neurons depends on a robust defense. ...

Lipidome atlas of the adult human brain

... This approach offers a potent and unbiased method for identifying lipid-specific biomarkers associated with diseases [18]. Although several studies have explored lipidomic features and their changes in SCZ [19][20][21], none have delved into the impact of baseline lipid profiles on treatment response, especially in terms of identifying biomarkers. ...

Lipid Alteration Signature in the Blood Plasma of Individuals With Schizophrenia, Depression, and Bipolar Disorder

JAMA Psychiatry

... It has also been described that there are changes in the lipidomic profiles of bioactive lipids in plasma and CSF, as well as in specific anatomical regions of the brain associated with the pathological characteristics of AD and Parkinson's disease [142]. Significant alterations in plasma lipids have also been described in rats and mice with spinal cord and sciatic nerve injury, which indicates that lipid metabolism could be related to the recovery and/or damage processes following nerve injury [143,144]. The application of lipidomics to disorders associated with metabolic syndrome has been widely described. ...

Time-Dependent Effect of Sciatic Nerve Injury on Rat Plasma Lipidome

... Data quality was ensured according to [30]; briefly, sample randomization was performed during pre-analytical and analytical procedures, along with three injections of blank followed by three injections of the internal standard mix to equilibrate the LC system prior to sample runs, analysis of QC sample was run every six samples to check for signal abundance and retention time (Rt), Rt shifts control of internal standards was carried out in every sample. then treated for 48 h with a mixture of oleic acid and palmitic acid (OAPA, 200 μM final concentration each) to induce lipotoxicity. ...

The Hitchhiker’s Guide to Untargeted Lipidomics Analysis: Practical Guidelines

... It is interesting to note that all enzymes and lysosphingolipids are involved in ceramide metabolism (Figure 2). It is well known that ceramides are enriched in neural tissues and are important for brain functioning [32]. The disturbances in sphingolipid metabolism in neurodegeneration is now widely discussed [33]. ...

Ceramides: Shared Lipid Biomarkers of Cardiovascular Disease and Schizophrenia

Consortium Psychiatricum

... On the other hand, this particularly venlafaxine, appear to have the opposite effect on fatty acids [20]. Recent studies have found that longterm administration of fluoxetine alters the lipid composition of the macaque brain, with a major trend towards lower PUFA [21] and a reduction in plasma C20:4n6 levels [22]. The above results suggest that overall antidepressants may reduce fatty acid levels in humans, which is consistent with the present study's findings. ...

Long-Term Fluoxetine Administration Causes Substantial Lipidome Alteration of the Juvenile Macaque Brain

... Further, the biological value of a protein is determined by its amino acid profile and the proportions of the content of individual amino acids, and especially, exogenous amino acids (tryptophan, arginine, lysine, histidine, leucine, valine, phenylalanine, and methionine) are very important [28]. The amino acid composition of wheat grain is quite unbalanced, with a lack of essential amino acids like lysine, threonine, and methionine. ...

Genotyping and lipid profiling of 601 cultivated sunflower lines reveals novel genetic determinants of oil fatty acid content

BMC Genomics