Daniel M. Linares’s research while affiliated with University College Cork and other places

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Publications (47)


Figure 1. Real-time cell analysis of the effects of putrescine and cadaverine on HT29 cells. Cells were exposed to the indicated concentrations of putrescine (A), cadaverine (B) or control medium (0 mM). Vertical arrows show the point of administration of putrescine or cadaverine. The data correspond to a representative experiment of the triplicates achieved. Vertical bars represent standard deviations.
Dose-response curves for putrescine and cadaverine in HT29 intestinal cells. Cell cultures were exposed to a range of putrescine (A) or cadaverine (B) concentrations for 24 h. The curves were made by plotting the normalized cell index at 24 h of treatment obtained using RTCA, against the log10 value of the corresponding BA concentration. The data represent the means ± standard deviations of at least three independent experiments. An asterisk indicates the first significant difference with respect to the smallest dose of BA assayed (0.63 mM for both putrescine and cadaverine); it therefore corresponds to the LOAEL (*p < 0.05). Numerical values for the IC50, NOAEL, LOAEL, Hill slope and R² are also indicated.
Toxicity towards HT29 cells of putrescine and cadaverine. HT29 cells were grown in flat-bottomed microplates for 20 h, and then exposed to increasing amounts of (A) putrescine (5, 20, 40, 60 and 100 mM) or (B) cadaverine (5, 20, 40, 70 and 90 mM) for 24 h. Cells were observed using an inverted optical microscope (magnification 40x).
Determination of the cytolytic effect of putrescine (A) and cadaverine (B) on HT29 intestinal cells. RTCA cell culture supernatants were collected after 24 h of incubation with the corresponding concentration of putrescine or cadaverine. BA-induced necrosis was monitored as the release of cytosolic lactate dehydrogenase (LDH) into the culture medium. The data represent the percentage of cells lysed by treatment with different concentrations of putrescine or cadaverine. Data represent the means of at least three independent experiments; vertical bars represent standard deviations.
The biogenic amines putrescine and cadaverine show in vitro cytotoxicity at concentrations that can be found in foods
  • Article
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January 2019

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752 Reads

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159 Citations

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Daniel M. Linares

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Abstract Putrescine and cadaverine are among the most common biogenic amines (BA) in foods, but it is advisable that their accumulation be avoided. Present knowledge about their toxicity is, however, limited; further research is needed if qualitative and quantitative risk assessments for foods are to be conducted. The present work describes a real-time analysis of the cytotoxicity of putrescine and cadaverine on intestinal cell cultures. Both BA were cytotoxic at concentrations found in BA-rich foods, although the cytotoxicity threshold for cadaverine was twice that of putrescine. Their mode of cytotoxic action was similar, with both BA causing cell necrosis; they did not induce apoptosis. The present results may help in establishing legal limits for both putrescine and cadaverine in food.

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CLA-producing adjunct cultures improve the nutritional value of sheep cheese fat

September 2018

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64 Reads

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21 Citations

Food Research International

The influence of the autochthonous CLA-producing Lactobacillus plantarum TAUL 1588 and Lactobacillus casei subsp. casei SS 1644 strains and the ripening time on the fatty acid (FA) content and sensory characteristics of sheep cheese were investigated. Three cheese types with different cultures and the control cheese were produced in duplicate and ripened for 8 months. 86 individual FA were determined by gas chromatography. Ripening time (2, 90, 180 and 240 days) did not have a significant effect (P >.05) on the FA content. However, the presence of both Lactobacillus CLA-producing strains led to a decrease of the saturated FA content and to 1.30, 1.19 and 1.27 times higher levels of vaccenic acid, CLA and omega-3, respectively, when compared to the control cheese. This combination allowed obtaining sheep milk cheeses with a healthier FA content, without appreciable changes on sensory characteristics. This work could be a promising approach to increase the bioactive fatty acid content of cheeses.


Spermine and spermidine are cytotoxic towards intestinal cell cultures, but are they a health hazard at concentrations found in foods?

July 2018

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187 Reads

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48 Citations

Food Chemistry

Spermine and spermidine are polyamines (PA) naturally present in all organisms, in which they have important physiological functions. However, an excess of PA has been associated with health risks. PA accumulates at quite high concentrations in some foods, but a quantitative assessment of the risk they pose has been lacking. In the present work, the cytotoxicity of spermine and spermidine was evaluated using an in vitro human intestinal cell model, and employing real-time cell analysis. Both spermine and spermidine showed a dose-dependent cytotoxic effect towards the cultured cells, with necrosis the mode of action of spermidine and perhaps also that of spermine. Spermine was more cytotoxic than spermidine, but for both PA the concentrations found to be toxic were above the maximum at which they have been found in food. The present results do not, therefore, support the idea that spermine or spermidine in food is harmful to healthy people.


Production of Vitamins, Exopolysaccharides and Bacteriocins by Probiotic Bacteria

November 2017

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112 Reads

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7 Citations

This chapter details the production of three types of complex biomolecules by probiotic bacteria, namely vitamins, exopolysaccharides (EPS) and bacteriocins, and discusses their potential for health promotion in humans. It has been suggested that vitamin production is one of a number of functional characteristics associated with probiotic bacteria and gastrointestinal (GI) microbiota. A large number of lactic acid bacteria (LAB) have been reported to produce vitamins, such as folate (vitamin B9), cobalamin (vitamin B12), menaquinone (vitamin K2), riboflavin (vitamin B2) and thiamine (vitamin B1). A number of LAB, propionibacteria and bifidobacteria can synthesise EPS, which are excreted from the bacterial cells and which may or may not be loosely attached to the cell wall. EPS can contribute to the improved stability, rheology and texture of fermented dairy products, and may also offer protection to bacterial cells against bacteriophage attack, desiccation and osmotic stress.


Production and Maintaining Viability of Probiotic Micro-Organisms in Dairy Products

November 2017

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290 Reads

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16 Citations

The stability of probiotic cultures has been seen as an issue for dairy manufacturers and consumers and this chapter reviews the technical and scientific aspects of probiotic dairy products. Probiotic micro-organisms are shown together with their main metabolic products. This provides some information on their possible role in flavour production, but it should be noted that the traditional lactic acid bacteria (LAB) (i.e. starter cultures) are mainly responsible for much of the flavour and aroma. For probiotic products, micro-organisms are selected for their various health benefits. A wide range of fermented milk products is made in many different countries. The classical example is yoghurt. Frozen yoghurt technology may be adopted for the inclusion of probiotic cultures into ice cream and frozen desserts. The viability of probiotic bacteria in yoghurt depends on the strains used, interaction between species present, production of hydrogen peroxide due to bacterial metabolism, and the final acidity of the product.


Study of the conjugated linoleic acid synthesis by Lactobacillus strains and by different co-cultures designed for this ability

August 2017

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65 Reads

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23 Citations

Journal of Functional Foods

Consumer concern about the relationship between food and health has generated a growing interest in functional foods. Conjugated linoleic acid (CLA) has been associated with several beneficial health properties. Therefore, this study reports the design of co-cultures containing CLA-producing strains and their performance in MRS and in skim milk. The four designed co-cultures were tested under different conditions. In MRS, co-culture 2 (containing autochthonous Lactococcus lactis strains and Lactobacillus plantarum TAUL 1588) was the highest CLA-producer (98.01 µg/mL) after 48 h incubation. In milk, the highest total CLA production (56.51 µg/mL) was reached with co-culture 4 (containing autochthonous Lactococcus lactis, Lactobacillus plantarum TAUL 1588 and Lactobacillus casei SS 1644) after 72 h. These results open the way for the use of co-cultures containing CLA-producing strains to manufacture cheese and obtain functional dairy products rich in bioactive fatty acids.


Production of conjugated linoleic acid and gamma-aminobutyric acid by autochthonous lactic acid bacteria and detection of the genes involved

July 2017

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108 Reads

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35 Citations

Journal of Functional Foods

In this study, 85 strains of lactic acid bacteria isolated from artisanal cheeses were screened to determine their capacity to synthesise bioactive compounds. Four Lactobacillus plantarum and two Lactobacillus casei subsp. casei strains were capable of synthesizing conjugated linoleic acid (CLA). The highest level of CLA formed in MRS after 48 h incubation was 19.26 µg/mL. Six Lactobacillus brevis and four Lactococcus lactis subp. lactis strains produced gamma-aminobutyric acid (GABA) and the highest concentration (2524.05 µg/mL) was found after 72 h incubation. The detection of genes encoding linoleate isomerase or glutamate decarboxylase system could be suitable for use as screening method of CLA or GABA-producer strains, although this should be studied in a larger number of strains. Our findings suggest that the above strains are potential candidates for the design of starter cultures with the capacity to generate bioactive compounds, offering new possibilities for the manufacture of functional dairy products.


Beneficial effects resulting from the consumption of biofunctional fermented dairy foods. Lactic acid bacteria participating in milk fermentation in situ release and naturally enrich the fermented dairy product with a broad range of bioactive metabolites. Subsequent ingestion of this product can exert important health-promoting activities on the consumer, such as anti-hypertensive, and anti-diabetic, immune-modulatory, anti-cholesterolemic or microbiome modulation.
TABLE 2 | Characteristic aspects of bacteriocins compared to conventional antibiotics (Adapted from Cleveland et al., 2001). 
Lactic Acid Bacteria and Bifidobacteria with Potential to Design Natural Biofunctional Health-Promoting Dairy Foods

May 2017

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916 Reads

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303 Citations

Consumer interest in healthy lifestyle and health-promoting natural products is a major driving force for the increasing global demand of biofunctional dairy foods. A number of commercial sources sell synthetic formulations of bioactive substances for use as dietary supplements. However, the bioactive-enrichment of health-oriented foods by naturally occurring microorganisms during dairy fermentation is in increased demand. While participating in milk fermentation, lactic acid bacteria can be exploited in situ as microbial sources for naturally enriching dairy products with a broad range of bioactive components that may cover different health aspects. Several of these bioactive metabolites are industrially and economically important, as they are claimed to exert diverse health-promoting activities on the consumer, such as anti-hypertensive, anti-inflammatory, and anti-diabetic, anti-oxidative, immune-modulatory, anti-cholesterolemic, or microbiome modulation. This review aims at discussing the potential of these health-supporting bacteria as starter or adjunct cultures for the elaboration of dairy foods with a broad spectrum of new functional properties and added value.


Complete Genome Sequence of the Gamma-Aminobutyric Acid-Producing Strain Streptococcus thermophilus APC151

April 2017

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32 Reads

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10 Citations

Genome Announcements

Here is presented the whole-genome sequence of Streptococcus thermophilus APC151, isolated from a marine fish. This bacterium produces gamma-aminobutyric acid (GABA) in high yields and is biotechnologically suitable to produce naturally GABA-enriched biofunctional yogurt. Its complete genome comprises 2,097 genes and 1,839,134 nucleotides, with an average G+C content of 39.1%.


Biogenic Amines in Dairy Products

December 2016

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152 Reads

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35 Citations

Biogenic amines (BAs) are low molecular weight, nitrogenous, basic, organic compounds mainly synthesised via the decarboxylation of amino acids. BAs can be found in many types of food and beverage, albeit in very different concentrations. The most important BAs in dairy products are histamine, tyramine, putrescine, cadaverine and β-phenylethylamine. This chapter describes the biochemistry of BAs, the micro-organisms and genes responsible for the production of the main BAs found in dairy products, the toxicity of BAs and the intoxication symptoms associated with their ingestion. A detailed analysis of the factors affecting the accumulation of BAs in dairy products is also reviewed from the perspective of their nature as toxins produced in situ in foods as a result of microbial activities. The pH, temperature and salt concentration have an impact on BAs accumulation since they can influence the growth of BAs-producing bacteria, their gene expression, and the activity of their enzymes and transporters.


Citations (44)


... Injection of isotope-labelled arginine into rats via a colonic catheter resulted in accumulation of isotope-labelled putrescine, suggesting that microbiota can produce putrescine in-vivo, thereby modifying intestinal concentrations [66]. In stool, increased levels of the cytotoxins cadaverine and putrescine [67] have been identified in individuals with UC and CD relative to healthy controls [68,69]. Examination of intestinal biopsies has revealed increased intracellular levels of spermidine and N 8 -acetylspermidine and decreased spermine in the colonic epithelial cells of individuals with IBD relative to healthy individuals [70]. ...

Reference:

Microbiota-derived metabolites in inflammatory bowel disease
The biogenic amines putrescine and cadaverine show in vitro cytotoxicity at concentrations that can be found in foods

... Caprine coalho cheese mixed with LAB of starter culture (control), as well as probiotic bacteria of Lactobacillus acidophilus, Lacticaseibacillus paracasei, and Bifidobacterium lactis presented cis-9, trans-11 CLA levels of 0.66%, 0.67%, 0.58%, and 0.73% FAME at the end of storage at 10 • C for 28 days (Bezerra et al., 2017). The addition of starter culture of probiotic L. plantarum (TAUL 1588 strain) and probiotic Lacticaseibacillus casei (SS 1644 strain) in ovine milk resulted in increased CLA levels in ovine cheese model by 1.19 times as much as the control (Renes et al., 2019). The use of probiotic starter culture Levilactobacillus brevis B1 and L. plantarum Os2 resulted in an increase of CLA in various cheese products ranging from 2.60% to 2.85% FAME (Lepecka et al., 2022). ...

CLA-producing adjunct cultures improve the nutritional value of sheep cheese fat
  • Citing Article
  • September 2018

Food Research International

... Spermine is a polyamine, and polyamine supplementation may extend the life span in model organisms [37]. While polyamines have been reported to pose health hazards, such as lowering blood pressure and causing respiratory symptoms and nephrotoxicity, the work of del Rio et al. does not support this assertion [38]. Compound 90 (indole-3-carboxaldehyde) is a plumerane alkaloid, which was detected in high amounts in the leaf and flower samples in this study [39]. ...

Spermine and spermidine are cytotoxic towards intestinal cell cultures, but are they a health hazard at concentrations found in foods?
  • Citing Article
  • July 2018

Food Chemistry

... bulgaricus proteolitik özellikleri sayesinde Bifidobacterium 'un büyümesi için gerekli olan amino asitleri (valin, glisin ve histidin vb.) üretmektedir. Ayrıca S. thermophilus oksijen temizleyici olarak görev yaparak ortamdaki oksijeni azaltmakta ve anaerobik olan Bifidobacterium'un hayatta kalma oranını arttırmaktadır (28). Uzayan depolama süresi boyunca her iki probiyotik bakteri grubunun da arzu edilen miktar altına düştüğü görülmekle beraber Bifidobakterilerin probiyotik Laktobasillere oranla daha stabil kaldığı sonucuna varılmıştır. ...

Production and Maintaining Viability of Probiotic Micro-Organisms in Dairy Products
  • Citing Chapter
  • November 2017

... It is commonly known that mammals are unable to synthesize most vitamins. However, some intestinal bacteria such as Lactobacillus can produce vitamins such as folate, vitamin B12, and riboflavin [64]. Gut microbiota have been identified as a source of such vitamins, and these vitamins have been described because of the fermentation of Lactobacillus in cheese, yoghurt, and other fermented products. ...

Production of Vitamins, Exopolysaccharides and Bacteriocins by Probiotic Bacteria
  • Citing Chapter
  • November 2017

... Lactic acid bacteria (LABs) are of high economic importance and play an important role in the fermentation process of traditional dairy products. Their metabolic properties help to develop the desirable characteristics of food products and allow the nutritional value of raw materials to be maintained and often increased (Linares et al. 2017). Many species of Lactobacillus https://doi.org/10. ...

Lactic Acid Bacteria and Bifidobacteria with Potential to Design Natural Biofunctional Health-Promoting Dairy Foods

... Interestingly, the highest CLA production with a yield of 98.01 µg/mL was achieved by coculturing two strains (L. lactis and L. plantarum TAUL 1588) in milk [30]. In another study, the CLA content of Argentinean semi-hard goat cheese was enhanced by adding a mixture of native strains of lactic acid bacteria as a starter. ...

Study of the conjugated linoleic acid synthesis by Lactobacillus strains and by different co-cultures designed for this ability
  • Citing Article
  • August 2017

Journal of Functional Foods

... Previous research has shown that fermentation conditions such as pH, temperature, time and the LA content of the medium affect the in vitro production of CLA (Terán et al., 2015;Hussain et al., 2016;Renes et al., 2017). ...

Production of conjugated linoleic acid and gamma-aminobutyric acid by autochthonous lactic acid bacteria and detection of the genes involved
  • Citing Article
  • July 2017

Journal of Functional Foods

... The cultures L. casei Shirota, S. salivarius fmb5 and L. plantarum NDC75017 were employed to enrich milk with GABA. Recently, yogurt and cheese were developed with 2 mg GABA/ml employing probiotic strains S. thermophilus APC15 and Lactococcus lactis as source of GABA respectively (Shan et al. 2015, Linares et al. 2016a, Linares et al. 2017, Nomura et al. 1998, Pouliot-Mathieu et al. 2007, Pouliot-Mathieu et al. 2013). ...

Complete Genome Sequence of the Gamma-Aminobutyric Acid-Producing Strain Streptococcus thermophilus APC151

Genome Announcements

... In the tested product (BBP), the tryptamine content is 186 µg/g, while in tomatoes the levels reach 147.1 µg/g and in chicory, it reaches 0.8 µg/g [57]. Although NOAEL for tryptamine has not yet been well established, determining its content is critical as this amine can increase the harmful effect of histamine and tyramine [58]. No adverse effects, such as vomiting or diarrhea, were observed from the consumption of BBP. ...

Biogenic Amines in Dairy Products
  • Citing Chapter
  • December 2016