Christopher Macleod’s research while affiliated with James Hutton Institute and other places

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Publications (8)


(a) Waypointed route as planned in Mission Planner (ver. 1.3.38), (b) orthomosaic depicting the field site, (c) amount of overlap between the images used in this study, seen over the extent of the field site, where black dots indicate camera trigger locations, and red and white dots indicate the location of the GNSS data points
Workflow outline. A typical SfM + MVS workflow, the workflow utilized in this study, is outlined. The major steps in terms of computational cost or labor intensity are as follows: (I) aerial images are collected using a consumer‐grade drone along waypointed route, (V) generate a DSM in an absolute coordinate system (e.g., BNG36), (VI) utilize the SfM + MVS DSM and in situ collected DTM data points to calculate the sward canopy height
Sward height distribution of in situ validation measurements of sward height
Spatial distribution of significant changes between replicate image datasets (n = 3) for four software (Photoscan, 3DFlow, Pix4D, and MICMAC) at “High” quality settings, respectively. *(ns = not significant, s = significant)
Boxplot of the RMSE of the SfM + MVS‐derived sward heights generated using the three replicate image datasets, compared to sward height validation data. The data on the x‐axis are labeled according to replicate image dataset (1–3), and validation data (sward height). () indicates the median (RMSE), (, lower and upper) represents the 25th and 75th percentiles, respectively, and () shows the minimum and maximum data point value (Matlab, 2017)

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Structure from motion photogrammetry in ecology: Does the choice of software matter?
  • Article
  • Full-text available

September 2019

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338 Reads

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25 Citations

Joel Forsmoo

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Christopher J. A. Macleod

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Richard E. Brazier

Image‐based modeling, and more precisely, Structure from Motion (SfM) and Multi‐View Stereo (MVS), is emerging as a flexible, self‐service, remote sensing tool for generating fine‐grained digital surface models (DSMs) in the Earth sciences and ecology. However, drone‐based SfM + MVS applications have developed at a rapid pace over the past decade and there are now many software options available for data processing. Consequently, understanding of reproducibility issues caused by variations in software choice and their influence on data quality is relatively poorly understood. This understanding is crucial for the development of SfM + MVS if it is to fulfill a role as a new quantitative remote sensing tool to inform management frameworks and species conservation schemes. To address this knowledge gap, a lightweight multirotor drone carrying a Ricoh GR II consumer‐grade camera was used to capture replicate, centimeter‐resolution image datasets of a temperate, intensively managed grassland ecosystem. These data allowed the exploration of method reproducibility and the impact of SfM + MVS software choice on derived vegetation canopy height measurement accuracy. The quality of DSM height measurements derived from four different, yet widely used SfM‐MVS software—Photoscan, Pix4D, 3DFlow Zephyr, and MICMAC, was compared with in situ data captured on the same day as image capture. We used both traditional agronomic techniques for measuring sward height, and a high accuracy and precision differential GPS survey to generate independent measurements of the underlying ground surface elevation. Using the same replicate image dataset (n = 3) as input, we demonstrate that there are 1.7, 2.0, and 2.5 cm differences in RMSE (excluding one outlier) between the outputs from different SfM + MVS software using High, Medium, and Low quality settings, respectively. Furthermore, we show that there can be a significant difference, although of small overall magnitude between replicate image datasets (n = 3) processed using the same SfM + MVS software, following the same workflow, with a variance in RMSE of up to 1.3, 1.5, and 2.7 cm (excluding one outlier) for “High,” “Medium,” and “Low” quality settings, respectively. We conclude that SfM + MVS software choice does matter, although the differences between products processed using “High” and “Medium” quality settings are of small overall magnitude. In this manuscript, we show that while centimetric resolution aerial photographic data captured from a low‐flying multirotor drone can deliver new insights into the spatial heterogeneity of an intensively managed grassland sward, there are important, previously neglected, methodological uncertainties. We show that there are significant differences in the quality of the information derived from replicate image datasets and different image‐based modeling software. This understanding is crucial for the development of drone and image‐based modeling workflows if it is to fulfill a role as a new quantitative remote sensing tool to inform management frameworks and species conservation schemes.

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Policy-driven monitoring and evaluation: Does it support adaptive management of socio-ecological systems?

April 2019

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662 Reads

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74 Citations

The Science of The Total Environment

Inadequate Monitoring and Evaluation (M&E) is often thought to hinder adaptive management of socio-ecological systems. A key influence on environmental management practices are environmental policies: however, their consequences for M&E practices have not been well-examined. We examine three policy areas - the Water Framework Directive, the Natura 2000 Directives, and the Agri-Environment Schemes of the Common Agricultural Policy - whose statutory requirements influence how the environment is managed and monitored across Europe. We use a comparative approach to examine what is monitored, how monitoring is carried out, and how results are used to update management, based on publicly available documentation across nine regional and national cases. The requirements and guidelines of these policies have provided significant impetus for monitoring: however, we find this policy-driven M&E usually does not match the ideals of what is needed to inform adaptive management. There is a tendency to focus on understanding state and trends rather than tracking the effect of interventions; a focus on specific biotic and abiotic indicators at the expense of understanding system functions and processes, especially social components; and limited attention to how context affects systems, though this is sometimes considered via secondary data. The resulting data are sometimes publicly-accessible, but it is rarely clear if and how these influence decisions at any level, whether this be in the original policy itself or at the level of measures such as site management plans. Adjustments to policy-driven M&E could better enable learning for adaptive management, by reconsidering what supports a balanced understanding of socio-ecological systems and decision-making. Useful strategies include making more use of secondary data, and more transparency in data-sharing and decision-making. Several countries and policy areas already offer useful examples. Such changes are essential given the influence of policy, and the urgency of enabling adaptive management to safeguard socio-ecological systems.




Fig. 1. Map of Scotland with online river level gauging stations. (Source: SEPA website -http://apps.sepa.org.uk/waterlevels/default.aspx? sm=t, accessed 3-3-2019.)
Fig. 2. The three main elements of our focal Scottish Environment Protection Agency (SEPA) river level webpages: A) 'Water Level graph' showing the changes in the water levels at one gauging station (here along the river Spey) over 72 h; B) overview of semi-static information for this station; C) 'Current water level indicator' which puts the last recorded level in the context of previously recorded levels at the station.
Fig. 6. Graphs from the online NLG experiment.
Spearman correlation values between direct and search traffic sources with fishing and boat related traffic sources.
Towards more effective online environmental information provision through tailored Natural Language Generation: Profiles of Scottish river user groups and an evaluative online experiment

March 2019

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208 Reads

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5 Citations

The Science of The Total Environment

As a result of societal transformations, political governance shifts, and advances in ICT, online information has become crucial in efforts by public authorities to make citizens better stewards of the environment. Yet, their environmental information provision may not always be attuned to end users' rationales, behaviours and appreciations. This study revolves around dynamic river level information provided by an environmental regulator – updated once a day or more, and collected by a sensor network of 333 gauging stations along 232 Scottish rivers. Employing an elaborate mixed methods approach with qualitative and quantitative elements, we examined if profiling of web page user groups and the subsequent employment of a specially designed Natural Language Generation (NLG) system could foster more effective online information provision. We identified profiles for the three main user groups: fishing, flood risk related, and paddling. The existence of well-distinguishable rationales and characteristics was in itself an argument for profiling; the same river level information was used in entirely different ways by the three groups. We subsequently constructed an advanced online experiment that implemented NLG based on live river level data. We found that textual information can be of much value in translating dynamic technical information into straightforward messages for the specific purposes of the user groups. We conclude that tailored NLG could be widely used in more effective online environmental information provision, and we provide five practical recommendations for public authorities and other information providers.


Data summarizing monitoring and evaluation for three European environmental policies in 9 cases across Europe

February 2019

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196 Reads

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1 Citation

Data in Brief

The data presented in this DiB article provide an overview of Monitoring and Evaluation (M&E) carried out for 3 European environmental policies (the Water Framework Directive, the Natura 2000 network of protected areas, and Agri-Environment Schemes implemented under the Common Agricultural Policy), as implemented in 9 cases (Catalonia (Spain), Estonia, Finland, Flanders (Belgium), Hungary, Romania, Slovakia, Scotland (UK), Sweden). These data are derived from reports and documents about monitoring programs that were publicly-available online in 2017. The literature on M&E to support adaptive management structured the issues that have been extracted and summarized. The data is related to the research article entitled “Policy-driven monitoring and evaluation: does it support adaptive management of socio-ecological systems?” [Stem et al., 2005]. The information provides a first overview of monitoring and evaluation that has been implemented in response to key European environmental policies. It provides a structured overview that permits a comparison of cases and policies and can assist other scholars and practitioners working on monitoring and evaluation.



Citations (4)


... The flight images were mosaicked within the software Pix4D Mapper (version 4.4.12) to create orthomosaics and 2.5D digital surface models (DSMs) using Structure from Motion (SfM) algorithms. The SfM technique has revolutionized analyzing surface structure in ecology and is perhaps the most practical and affordable alternative to LiDAR (Forsmoo et al. 2019). We only used the DSMs in this study to aid in vegetation classification using the parameter for plant height only. ...

Reference:

Evaluating Coastal Wetland Restoration Using Drones and High-Resolution Imagery
Structure from motion photogrammetry in ecology: Does the choice of software matter?

... There are also examples of engaging technologies with natural language to support citizen interaction with water information technologies (Koen et al. 2019). This implies recognition not only of local parameters but local ways of knowing, and the facilitation of participant input in ways that make sense to them. ...

Towards more effective online environmental information provision through tailored Natural Language Generation: Profiles of Scottish river user groups and an evaluative online experiment

The Science of The Total Environment

... The application of space observations like InSAR has the potential to improve our assessment of Nordic water resources and their changes. Despite this data being mostly freely available in the Nordic countries (in contrast to many other European countries) (Waylen et al. 2019a(Waylen et al. , 2019b, it is still not taken full advantage of for studying Nordic water resources and ecosystems, one obstacle being their large data storage capacities and processing time requirements. Furthermore, there is still little information of climate change influences on ET at the Nordic scale despite its key control on the water balance. ...

Data summarizing monitoring and evaluation for three European environmental policies in 9 cases across Europe

Data in Brief

... Each stage of the adaptive management cycle requires more resources and may entail more political conflict as the process moves from deliberating about ideas to implementing on-the-ground projects that incur material costs and benefits for different actors. Evidence of this argument is provided by the lack of monitoring that is often observed in environmental governance processes that purport to utilize adaptive management (Leach et al., 2002;Waylen et al., 2019). Not only is monitoring expensive, but changing policies in response to monitoring entails renegotiating political decisions and administrative arrangements that were needed to enable the initial set of actions. ...

Policy-driven monitoring and evaluation: Does it support adaptive management of socio-ecological systems?

The Science of The Total Environment