Chia-Ying Li’s research while affiliated with Show Chwan Memorial Hospital and other places

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Publications (71)


Interfacial Stabilization of Organic Electrochemical Transistors Conferred Using Polythiophene-Based Conjugated Block Copolymers with a Hydrophobic Coil Design
  • Article

September 2024

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5 Reads

ACS Applied Materials & Interfaces

Chia-Ying Li

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Guo-Hao Jiang

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The recent interest in developing low-cost, biocompatible, and lightweight bioelectronic devices has focused on organic electrochemical transistors (OECTs), which have the potential to fulfill these requirements. In this study, three types of poly(3-hexylthiophene) (P3HT)-based block copolymers (BCPs) incorporating different insulating blocks (poly(ⁿbutyl acrylate) (PBA), polystyrene, and poly(ethylene oxide) (PEO)) were synthesized for application in OECTs. The morphological, crystallographic, and electrochemical properties of these BCPs are systematically investigated. Accordingly, P3HT-b-PBA demonstrates superior performance in the KCl-based aqueous electrolyte, with a higher product of mobility and capacitance (μC*) at 170 F s–1 cm–1 V–1 than that of the P3HT homopolymer at 58 F s–1 cm–1 V–1. P3HT-b-PBA exhibits better stability over 50 ON/OFF switching cycles than do other BCPs and P3HT homopolymers. With regard to the performance in the KPF6-based aqueous electrolyte, P3HT-b-PBA outperforms with a higher μC* of 9.2 F s–1 cm–1 V–1 than that of 8.6 F s–1 cm–1 V–1 observed from P3HT. Notably, both polymers exhibited almost no decay in device performance over 110 ON/OFF switching cycles. The strongly different performance of polymers in these two electrolytes is due to the side chain’s hydrophobicity and interdigitated lamellar structures, thereby retarding the doping kinetics of the highly hydrated Cl– ions compared with the slightly hydrated PF6– ions. Concerning the improved performance of P3HT-b-PBA, this is attributed to its soft and hydrophobic backbone. Our morphological and crystallographic analyses reveal that P3HT-b-PBA experiences minimal structural disorder when swelled by the electrolyte, maintaining its original structure better than the P3HT homopolymer and the hydrophilic BCP of P3HT-b-PEO. The hydrophobic nature of P3HT-b-PBA contributes to the stability of its backbone structure, ensuring enhanced capacitance during the operation of the OECT operation. These findings provide reassurance about the stability and performance of P3HT-b-PBA in the field of OECT applications. In summary, this study represents the first exploration of P3HT-based BCPs for OECT applications and investigates their structure–performance relationships in mixed ionic–electronic conductors.


An acridone based fluorescent dye for lipid droplet tracking and cancer diagnosis

July 2024

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40 Reads

Journal of Photochemistry and Photobiology B Biology

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Chia-Ying Li

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Lipid droplets (LDs) are spherical organelles that localize in the cytosol of eukaryotic cells. Different proteins are embedded on the surface of LDs, so LDs play a vital role in the physiological activities of cells. The dysregulation of LDs is associated with various human diseases, such as diabetes and obesity. Therefore, it is essential to develop a fluorescent dye that labels LDs to detect and monitor illnesses. In this study, we developed the compound BDAA12C for staining LDs in cells. BDAA12C exhibits excellent LD specificity and low toxicity, enabling us to successfully stain and observe the fusion of LDs in A549 cancer cells. Furthermore, we also successfully distinguished A549 cancer cells and MRC-5 normal cells in a co-culture experiment and in normal and tumour tissues. Interestingly, we found different localizations of BDAA12C in well-fed and starved A549 cancer cells and consequently illustrated the transfer of fatty acids (FAs) from LDs to mitochondria to supply energy for β-oxidation upon starvation. Therefore, BDAA12C is a promising LD-targeted probe for cancer diagnosis and tracking lipid trafficking within cells.




Asymmetric Side-Chain Engineering of Conjugated Polymers with Improved Performance and Stability in Organic Electrochemical Transistors

January 2024

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5 Reads

Journal of Materials Chemistry C

This study rigorously investigated the impact of asymmetric side chain design on the performance of organic electrochemical transistors (OECTs). Hydrophilic and hydrophobic side chains were systematically introduced into poly(isoindigo-bithiophene)-based polymers,...


Molecular structures of dinuclear iridium complexes D1–D5
Conversion of aniline into N-benzylaniline in catalytic systems using D1 as precursor and TPP, TMPP or TFPP as auxiliary ligand
X-ray crystal structures of Cat. 1, Cat. 2, and Cat. 3
Conversion of aniline into N-benzylaniline in D1/TMPP catalytic systems with different proportions of D1 and TMPP
Conversion of aniline into N-benzylaniline in D1/TMPP, D2/TMPP, D3/TMPP, D4/TMPP, and D5/TMPP catalytic systems

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Ligand effect of cyclometallated iridium(iii) complexes on N-alkylation of amines in hydrogen borrowing reactions
  • Article
  • Full-text available

October 2023

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62 Reads

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1 Citation

Dinuclear iridium complexes with the general formula (C^N)2Ir(μ-Cl)2Ir(C^N)2 (C^N = bidentate ligand with carbon and nitrogen donor atoms) were prepared and used in catalytic systems for N-alkylation of amines through the hydrogen borrowing pathway. Triphenylphosphine derivatives were used as auxiliary in catalytic systems to provide excellent conversion of amines to N-alkylation products in yields ranging from 57% to 100%. The catalytic ability of the catalyst depends on the structure of its coordination ligands, including bidentate ligands (C^N) and triphenylphosphine derivatives. These catalytic systems adopt an environmentally friendly and sustainable reaction process through a hydrogen self-transfer strategy, using readily available alcohols as alkylating agents without the need for bases, solvents, and other additives, showing potential in the synthetic and pharmaceutical industries.

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Hi-C scaffolding of the allotetraploid Ac. calamus genome and subgenome reconstruction
a Hi-C contact matrix of the 22 chromosomes in the Ac. calamus genome. We used Illumina sequencing reads from Hi-C libraries to reconstruct physical maps by ordering and clustering the assembled scaffolds into 22 pseudomolecules in the haploid genome of Ac. calamus. The vertical colorbar on the right of the axis indicates the logarithm (log2) of chromatin contact frequency. b Subgenome construction (see Methods). The 22 pseudomolecules of Ac. calamus were divided into two subgenomes, subgenome A including Chr01, 02, 03, 05–10 and 16, subgenome B including Chr04, 11–15 and 17–22 (Supplementary Table 8). The colorbar at the top indicates the Z-scaled relative abundance of k-mers, the larger the Z score, the higher the relative abundance of a k-mer. Source data are provided as a Source Data file.
Phylogenetic tree showing divergence times and the evolution of gene family size in 19 species
The green and red numbers are the numbers of expanded and contracted gene families, respectively. The blue portions of the pie charts represent the gene families whose copy numbers are constant. The orange portions of the pie charts represent the proportion of the 11,421 gene families found in the most recent common ancestor (MRCA) that expanded or contracted during recent differentiation. Star, showing the time and position of genome polyploidy event, the blue, yellow, cyan and green stars represent N. tetragona, core eudicot, Acorus and other monocots, respectively. For each branch, the pie chart shows the gene families number of contracted (green), expanded (red) and stable (blue).
WGD in Acorus
aKs distribution. Left y axis, orthologues of Ac. gramineus-Ac. calamus A, Ac. gramineus-Ac. calamus B, and Ac. calamus A-Ac. calamus B. Right y axis, paralogues of Ac. calamus A, Ac. calamus B, Ac. gramineus, pineapple and rice. b Dot plots of paralogues in the Ac. calamus A, Ac. calamus B and Ac. gramineus genomes illustrating the shared WGD and paralogues in the Ac. calamus genome clarifying the independent WGD event of Ac. calamus (Supplementary Fig. 24). c A collinear comparison of the Ac. calamus and Ac. gramineus genomes with the Amborella genome. Macrosynteny results showed that a collinear block pattern of 1 to 2 was retained between Amborella and Ac. calamus and between Amborella and Ac. gramineus. The corresponding contig IDs of Amborella are marked in the figure. Source data are provided as a Source Data file.
The karyotype evolution in monocots
Evolutionary scenario of Acorus and other representative angiosperm plants from the most recent common ancestor (MRCA) of 15 protochromosomes. After the divergence of monocots and eudicots, eudicots have been suggested to consist of seven (pre-γ ancestor) or 21 (post-γ ancestor) protochromosomes, with γ indicating an ancestral whole-genome triplication shared by most, eudicots (WGT-γ), such as Ar. thaliana and C. sinensis. In monocots, such as An. comosus and O. sativa, consisting of five (pre-τ ancestor) or ten (post-τ ancestor) chromosomes, with τ indicating the ancient WGD shared by most monocots, of which Acorus did not experience τ-WGD and have five chromosomes of pre-τ ancestor and experienced a WGD until 42 Mya, leading to 12, 10 and 12 chromosomes in Ac. gramineus, Ac. calamus A and Ac. calamus B, respectively. Thereafter, Ac. calamus A and Ac. calamus B formed an allotetraploid Ac. calamus with 22 chromosomes. The composition of ancestral chromosomes in modern plant genomes is shown below, with different colours representing different ancestral chromosomes. Distant polyploidization events are represented by circles in different colours. Source data are provided as a Source Data file.
The time of allotetraploidization and DNA methylation in homoeologous expression bias in Ac. calamus
a The distribution of sequence divergence rates of TEs as percentages of subgenome size of Ac. calamus. The TE content segregation between subgenomes A and B indicates the events of diploid progenitor divergence ( ~ 8.5 Mya) and subgenome merger ( ~ 1.3Mya) in tetraploid of Ac. calamus. b The synonymous substitution rate (Ks) of CG body-methylated homoeologous genes and the substitution rate distribution of gene-body DmCG. c Boxplot of the Ka/Ks ratio distribution of homoeologous genes of two extremely divergent expression clusters in two subgenomes as show in d. d Heatmaps of two extremely divergent co-expression clusters, of which one of two homoeologous genes in subgenome A or B was extensively transcribed while the other copies suppressed in seven tissues (flower, inflorescence, peduncle, leaf, root, bract, and stem). Cluster I, presents A bias genes; Cluster II, present B bias genes. FPKM, fragments per kilobase of exon per million fragments mapped for each predicted transcript. e Collinearity of Ac. calamus subgenome A, Ac. calamus subgenome B and Ac. gramineus after the WGD and in specific. f The distribution of homolog expression bias (HEB) of homologous gene pairs in all tissues of Ac. calamus A and B. HEB > 0 indicates a bias toward the subgenome A, and HEB < 0 indicates a bias toward the subgenome B. Source data are provided as a Source Data file.
Diploid and tetraploid genomes of Acorus and the evolution of monocots

June 2023

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495 Reads

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12 Citations

Monocots are a major taxon within flowering plants, have unique morphological traits, and show an extraordinary diversity in lifestyle. To improve our understanding of monocot origin and evolution, we generate chromosome-level reference genomes of the diploid Acorus gramineusand the tetraploid Ac. calamus, the only two accepted species from the family Acoraceae, which form a sister lineage to all other monocots. Comparing the genomes of Ac. grami- neus and Ac. calamus, we suggest that Ac. gramineus is not a potential diploid progenitor of Ac. calamus, and Ac. calamus is an allotetraploid with two subgenomes A, and B, presenting asymmetric evolution and B subgenome dominance. Both the diploid genome of Ac. gramineus and the subgenomes A and B of Ac. calamus show clear evidence of whole-genome duplication (WGD), but Acoraceae does not seem to share an older WGD that is shared by most other monocots. We reconstruct an ancestral monocot karyotype and gene toolkit, and discuss scenarios that explain the complex history of the Acorus genome. Our analyses show that the ancestors of monocots exhibit mosaic genomic features, likely important for that appeared in early monocot evolution, providing fundamental insights into the origin, evolution, and diversification of monocots.




Citations (56)


... Assuming that rho event occurred at~70Mya 36 and using this event to estimate a mutation rate, the Ks peak resulting from the syntenic alignment of the two subgenomes suggests their divergence at~30.9 Mya (recent Ks peaks at 0.2; Supplementary Fig. S8). ...

Reference:

Chromosome-level genome assemblies reveal genome evolution of an invasive plant Phragmites australis
Diploid and tetraploid genomes of Acorus and the evolution of monocots

... They produce a wealthy biochemical repository of secondary metabolites [13] ranging from terpenoids [14], It is well known that soft corals of the genus Lobophytum are one group of the most important marine invertebrates widely distributed in waters. They produce a wealthy biochemical repository of secondary metabolites [13] ranging from terpenoids [14], steroids [15], prostaglandins [16], and amides [17] to quinones [18]. Among these chemical constituents, steroids are one major group of metabolites that were found in many species of the genus Lobophytum, including Lobophytum sarcophytoides [9,17], Lobophytum pauciflorum [15], Lobophytum michaelae [19], Lobophytum crassum [20,21], Lobophytum lobophytum [22], Lobophytum compactum [23], Lobophytum patulum [24], and Lobophytum spp. ...

Chemical Constituents from the Octocoral Lobophytum sarcophytoides
  • Citing Article
  • November 2022

Chemistry of Natural Compounds

... Synergistic catalytic effect of Au nanoparticle deposited PANi film toward CO 2 reduction was systematically studied by Wang et al. (Table 1). [103] Electrodepositions of PANi and AuNPs were carried out in two steps. Increasing the deposition current (I dep ) resulted in gradual increase in electrochemically available surface area which in turn increased the efficiency of CO 2 reduction (Figure 3). ...

Facile electrosynthesis of polyaniline|gold nanoparticle core-shell nanofiber for efficient electrocatalytic CO2 reduction
  • Citing Article
  • November 2022

Electrochimica Acta

... Based on literature (Boldizsar et al., 2010;Peng et al., 2022), eight genes related to the regulation of osteoblasts were selected, and the primers used in the experiment were synthesized by Sangon Biotech Co., Ltd. The primer sequences are shown in Table 1. ...

Gu Sui Bu (Drynaria fortunei J. Sm.) antagonizes glucocorticoid-induced mineralization reduction in zebrafish larvae by modulating the activity of osteoblasts and osteoclasts
  • Citing Article
  • July 2022

Journal of Ethnopharmacology

... The differences in responses to nitrate observed in vitro were related to species ecological preferences and the soil nitrate content in native sites indicating that the germination response of initially mycoheterotrophic orchids to nitrate may be adaptive . Mycoheterotrophic orchids generally prefer soils with low available nutrients, and they obtain nitrogen from symbiotic fungi (Fochi et al., 2017;Li et al., 2022), so their negative response to nitrate could help their seeds to detect suitable patches . However, any other group of mycoheterotrophic plants have not been tested so it is unknown whether such a negative response to nitrate is related to mycoheterotrophy in general or not. ...

Genomes of leafy and leafless Platanthera orchids illuminate the evolution of mycoheterotrophy

Nature Plants

... Efective fxation of rib fracture, maintenance of fracture stability, and restoration of thoracic integrity are keys to the treatment of fail chest and the promotion of recovery of patients [3,4]. With the continuous development of internal fxation materials, internal fxation has been adopted to repair rib fractures in clinical practice, which can shorten the treatment cycle and improve the quality of life of patients [5]. At present, the sandwich method of double polymer mesh composite bone cement is commonly used in the world for bone chest wall reconstruction [6], but it still has some shortcomings such as limited movement of the chest wall after reconstruction, unable to be applied in the case of infection, and afecting postoperative radiotherapy or X-ray examination. ...

Improved Fixation Stability of a Dedicated Rib Fixation System in Flail Chest: A Retrospective Study

Medicina

... While, lapatinib proved to be a preferred treatment for patients exhibiting low KCNQ1 expression. 16 Zheng and Song 17 analysed the role of KCNH2 across different types of cancers and found that it is differentially expressed in multiple cancers and has high diagnosis and prognosis potential. The expression of SCN5A encoded protein was significantly higher in normal colon tissues than adjacent normal tissues. ...

A Novel Role of Arrhythmia-Related Gene KCNQ1 Revealed by Multi-Omic Analysis: Theragnostic Value and Potential Mechanisms in Lung Adenocarcinoma

International Journal of Molecular Sciences

... Studies showed that the implementation of open reduction and internal fixation for scapular fractures that have become displaced could result in an effective union rate and favourable functional outcomes [16]. The surgical approach for scapular fractures included the modified Judet approach [17], minimally invasive approach [18], reverse Judet approach [19], and mirror Judet approach [20]. Scapular body fractures were usually treated by the posterior inverted 7 approach of the Judet approach, which could be fixed by plate fixation or reconstruction of structural plate [17,21]. ...

Surgical stabilization of the ipsilateral scapula and rib fractures using the mirror Judet approach: a preliminary result

... For example, we found that HOMER3 was significantly associated with TAMs, which are commonly thought to promote tumorigenesis and development by modulating the adaptive immune response [20]. In contrast, regulatory T cells (Tregs) play a key role in tumor regulation in COAD [21,22]; we have identified a positive correlation between HOMER3 and Tregs. ...

Multi-Omics Reveal the Immunological Role and the Theragnostic Value of miR-216a/GDF15 Axis in Human Colon Adenocarcinoma

International Journal of Molecular Sciences

... The methods for analysis of thiol compounds and metabolites were referred to in the previous protocol [28]. To measure thiol compounds, extraction samples were mixed with the reaction solution (20 mM sodium carbonate at pH 9.5, 0.2 mM 13 C 6 -2-iodoacetaniline). ...

Docosahexaenoic Acid Inhibits Cell Proliferation through a Suppression of c-Myc Protein in Pancreatic Ductal Adenocarcinoma Cells

Antioxidants