Brooke Scelza’s research while affiliated with University of California, Los Angeles and other places

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Publications (67)


Context dependent preferences in prestige bias learning about vaccination in rural Namibian pastoralists
  • Article

October 2024

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8 Reads

Social Science & Medicine

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Brooke Scelza

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Helen Elizabeth Davis

Figure 1 -Distributions of age-adjusted prediction error across diverse cohorts. Violin plots A-H show differences in prediction error, adjusted for individual age, among Himba, ‡Khomani San, Baka,
Figure 2
Figure 3 -Shared cis-genetic architecture of CpG methylation among populations. Panels A-C show the correlations of estimated effect sizes of SNP genotype on DNA methylation level from baseline cis-meQTL scans of the Baka, ‡Khomani San, and Himba for cases where the same SNP-CpG relationship was identified in both populations. Panels D-F show the correlation in cis-heritability measures for significantly heritable (p value < .05) CpG sites across all pairwise combinations of populations. Panels G-I
Figure 4 -Accounting for meQTL genotype improves power to detect age associations. Panels A-D show
Figure 5 -Allele frequencies of meQTL influencing CpG predictors in published epigenetic clocks are differentiated across human populations. Panels A-C show density plots of the allele frequencies of meQTL identified in each of the three African populations relative to their frequency in 1000 Genomes Phase 3 Europeans. Red points are meQTL influencing CpGs in published age prediction models. Panels D-F show the influence of genotype on baseline methylation level for the meQTL highlighted with a diamond from the top row. The three colors indicate the three possible genotype classes for each meQTL.

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Common DNA sequence variation influences epigenetic aging in African populations
  • Preprint
  • File available

August 2024

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49 Reads

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1 Citation

Gillian L. Meeks

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Brooke Scelza

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Hana M. Asnake

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[...]

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Aging is associated with genome-wide changes in DNA methylation in humans, facilitating the development of epigenetic age prediction models. However, most of these models have been trained primarily on European-ancestry individuals, and none account for the impact of methylation quantitative trait loci (meQTL). To address these gaps, we analyzed the relationships between age, genotype, and CpG methylation in 3 understudied populations: central African Baka (n = 35), southern African ‡Khomani San (n = 52), and southern African Himba (n = 51). We find that published prediction methods yield higher mean errors in these cohorts compared to European-ancestry individuals, and find that unaccounted-for DNA sequence variation may be a significant factor underlying this loss of accuracy. We leverage information about the associations between DNA genotype and CpG methylation to develop an age predictor that is minimally influenced by meQTL, and show that this model remains accurate across a broad range of genetic backgrounds. Intriguingly, we also find that the older individuals and those exhibiting relatively lower epigenetic age acceleration in our cohorts tend to carry more epigenetic age-reducing genetic variants, suggesting a novel mechanism by which heritable factors can influence longevity.

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Medical mistrust survey responses by question.
Medical mistrust scores by healthcare experience.
Medical mistrust, discrimination and healthcare experiences in a rural Namibian community

May 2024

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52 Reads

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4 Citations

Substantial evidence indicates that medical mistrust, resulting from experiences with discrimination and marginalisation, is a determinant of health disparities in minority populations. However, this research is largely limited to the US and other industrialised countries. To broaden our understanding of the role of medical mistrust on health-care decision making, we conducted a study on healthcare experiences and perceptions in a rural, underserved indigenous community in northwest Namibia (n = 86). Mixing semi-structured interview questions with the medical mistrust index (MMI), we aim to determine the relevance of the MMI in a non-industrialised population and compare index scores with reports of healthcare experiences. We find that medical mistrust is a salient concept in this community, mapping onto negative healthcare experiences and perceptions of discrimination. Reported healthcare experiences indicate that perceived incompetence, maltreatment and discrimination drive mistrust of medical personnel. However, reporting of recent healthcare experiences are generally positive. Our results indicate that the concept of medical mistrust can be usefully applied to communities in the Global South. These populations, like minority communities in the US, translate experiences of discrimination and marginalisation into medical mistrust. Understanding these processes can help address health disparities and aid in effective public health outreach in underserved populations.


Figure 1.1 A graphical depiction of the polygyny threshold model (Orians 1969). The two sigmoidal curves show the respective fitness functions of a woman who either partners monogamously (solid line) or as a second mate (dashed line). The curves vary as a function of the male partner's resources, and assuming an unconstrained choice, women are expected to choose the option that maximizes their fitness. The optimal choice depends on the potential partners' respective resources. Consider the choice between the monogamous option in which the partner's resources are represented by point A and the polygynous option with a partner's resources at point B. The horizontal dotted line represents the threshold at which the choices are equivalent. If point B were to shift downward, then monogamy would be favored. Conversely, if point B were to shift upward, the polygynous option would be advantageous. Note that the fitness functions depicted here are hypothetical and could vary substantially in different contexts, particularly when integrating additional considerations such as those described in the text (e.g., potentially beneficial cooperation among co-wives).
Figure B.1.2.1 This figure shows a comparison of selected demographic and economic variables for a diverse set of societies. Calculated as averages, the variables include (1) years of maturity, starting at age 15, before individuals have their first child, (2) rates of child mortality under the age of 5 years old, (3) the total fertility rate, and (4) wealth per adult. Values within each category are standardized as the proportion of the maximum value. So-called WEIRD populations are represented with darkened symbols, whereas the six other societies are unfilled, with the latter sample drawn from studies by human behavioral ecologists. Among other implications, the comparisons suggest that HBE research often expands the range of behavioral variation observed in human populations. (WEIRD is an acronym to describe societies that are Western, Educated, Industrialized, Rich, and Developed.) Adapted from Winking et al. (2018), with permission from John Wiley and Sons © 2018 IARR.
Human Behavioral Ecology

March 2024

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382 Reads

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1 Citation

Among the diversity of perspectives for studying the nexus of evolution and human behavior, human behavioral ecology (HBE) emerged as the study of the adaptive nature of behavior as a function of socioecological context. This volume explores the history and diversification of HBE, a field which has grown considerably in the decades since its emergence in the 1970s. At its core, the principles of HBE have remained a clear and cogent way to derive predictions about the adaptive function of behavior, even as the questions and methods of the discipline have evolved to be more interdisciplinary and more synergistic with other fields in the evolutionary social sciences. This introductory chapter covers core concepts, including methodological individualism, conditional strategies, and optimization. The chapter then provides an overview of the state of the field, including a summary of current research topics, areas, and methods. The chapter concludes by emphasizing the integral role that human behavioral ecology continues to play in deepening scholarly understandings of human behavior.


Women's subsistence strategies predict fertility across cultures, but context matters

February 2024

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409 Reads

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5 Citations

Proceedings of the National Academy of Sciences

While it is commonly assumed that farmers have higher, and foragers lower, fertility compared to populations practicing other forms of subsistence, robust supportive evidence is lacking. We tested whether subsistence activities—incorporating market integration—are associated with fertility in 10,250 women from 27 small-scale societies and found considerable variation in fertility. This variation did not align with group-level subsistence typologies. Societies labeled as “farmers” did not have higher fertility than others, while “foragers” did not have lower fertility. However, at the individual level, we found strong evidence that fertility was positively associated with farming and moderate evidence of a negative relationship between foraging and fertility. Markers of market integration were strongly negatively correlated with fertility. Despite strong cross-cultural evidence, these relationships were not consistent in all populations, highlighting the importance of the socioecological context, which likely influences the diverse mechanisms driving the relationship between fertility and subsistence.


The cuckoldry conundrum

February 2024

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35 Reads

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1 Citation

Evolutionary Anthropology Issues News and Reviews

Concerns about cuckoldry are a dominant theme in evolutionary studies of mating, frequently used to explain sex differences in reproductive strategies. However, studies in nonhuman species have shown that cuckoldry can be associated with important benefits. These insights have not been well integrated with the human literature, which continues to focus on anticuckoldry tactics and negative repercussions for men. I evaluate two key assumptions central to human models of cuckoldry: (1) men are being tricked into investing in nonbiological offspring and (2) investment in nonbiological offspring is wasted. The ethnographic data on fatherhood shows that the concepts of pater and genitor are complex and locally constructed ideas that often include explicit knowledge of extra‐pair paternity, countering the idea that nonpaternity results from trickery. Furthermore, rather than being a “waste,” paternity loss can be associated with important gains for men, helping to explain why men invest in nonbiological offspring.


Figure 1: Schematic representation of the relationship between ASR and gender ideology.
Figure 2: This diagram illustrates the effect of polygyny on partnership opportunities in social groups depending on the local ASR. Green circles indicate women, orange triangles refer to men, and lines around individuals indicate marriages or pair bonds. Rows represent different ASR, and columns vary in their marriage rules. The ASR and local marriage rules interact to determine marriage opportunities. For example, in the upper row the population ASR is female biased. When monogamy is the norm, some women remain without a partner. When men can have multiple partners, this dampens the effect of a female-biased sex ratio (and could even result in some men remaining partnerless). If polyandry occurs, this exacerbates the scarcity of partners for women.
Sex ratios and gender norms: why both are needed to understand sexual conflict in humans

Evolutionary Human Sciences

Sexual conflict theory has been successfully applied to predict how in non-human animal populations, sex ratios can lead to conflicting reproductive interests of females and males and affect their bargaining positions in resolving such conflicts of interests. Recently this theory has been extended to understand the resolution of sexual conflict in humans, but with mixed success. We argue that an underappreciation of the complex relationship between gender norms and sex ratios has hampered a successful understanding of sexual conflict in humans. In this paper, we review and expand upon existing theory to increase its applicability to humans, where gender norms regulate sex ratio-effects on sexual conflict. Gender norms constrain who is on the marriage market, how they are valued, and may affect reproductive decision-making power. Gender norms can also directly affect sex ratios, and we hypothesize that they structure how individuals respond to market value gained or lost through biased sex ratios. Importantly, gender norms are in part a product of women's and men's sometimes conflicting reproductive interests, but these norms are also subject to other evolutionary processes. An integration of sexual conflict theory and cultural evolutionary theory is required to allow for a full understanding of sexual conflict in humans.




Increased homozygosity due to endogamy results in fitness consequences in a human population

October 2023

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57 Reads

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9 Citations

Proceedings of the National Academy of Sciences

Recessive alleles have been shown to directly affect both human Mendelian disease phenotypes and complex traits. Pedigree studies also suggest that consanguinity results in increased childhood mortality and adverse health phenotypes, presumably through penetrance of recessive mutations. Here, we test whether the accumulation of homozygous, recessive alleles decreases reproductive success in a human population. We address this question among the Namibian Himba, an endogamous agro-pastoralist population, who until very recently practiced natural fertility. Using a sample of 681 individuals, we show that Himba exhibit elevated levels of “inbreeding,” calculated as the fraction of the genome in runs of homozygosity (F ROH ). Many individuals contain multiple long segments of ROH in their genomes, indicating that their parents had high kinship coefficients. However, we do not find evidence that this is explained by first-cousin consanguinity, despite a reported social preference for cross-cousin marriages. Rather, we show that elevated haplotype sharing in the Himba is due to a bottleneck, likely in the past 60 generations. We test whether increased recessive mutation load results in observed fitness consequences by assessing the effect of F ROH on completed fertility in a cohort of postreproductive women (n = 69). We find that higher F ROH is significantly associated with lower fertility. Our data suggest a multilocus genetic effect on fitness driven by the expression of deleterious recessive alleles, especially those in long ROH. However, these effects are not the result of consanguinity but rather elevated background identity by descent.


Citations (56)


... However, the predictive accuracy of epigenetic clocks is affected by factors such as genetic background, lifestyle, environmental exposures, and technical variability [19]. Many existing clocks also have limitations in forecasting healthspan, assessing disease risk, and predicting cellular senescence [20][21][22]. Ongoing research is focused on optimizing predictive accuracy and improving the generalizability of these clocks across different populations and tissues [23]. Emerging technologies, such as single-cell methylation sequencing and multi-omics integration, are opening new possibilities for creating more precise and comprehensive epigenetic clocks [24][25][26]. ...

Reference:

Epigenetic Clocks: Beyond Biological Age, Using the Past to Predict the Present and Future
Common DNA sequence variation influences epigenetic aging in African populations

... At the individual level, factors such as health knowledge, mental health, and personal attitudes toward pregnancy affect how Black birthing people navigate healthcare [9]. These individual factors are intertwined with the interpersonal level, where relationships with family, friends, and particularly healthcare professionals influence their comfort, access to information, and trust in the healthcare system [11]. Supportive family members and empathetic professionals can help alleviate stress, but dismissive or culturally insensitive professionals can create additional barriers to quality care [12]. ...

Medical mistrust, discrimination and healthcare experiences in a rural Namibian community

... Methodologically, HBE aims for holism and nuance (Shenk & Mafson 2011), striving to draw generalizable inferences that are well situated in local socio-ecological contexts. In recent years, HBE has gained trac6on as a driving framework for understanding aspects of human behavioral and life history varia6on , including exci6ng advances that marry a tradi6onal emphasis on explana6ons of Darwinian func6on with proximate mechanisms that enable those func6ons to be carried out (Borgerhoff Mulder 2013;Scelza et al. 2024). HBE's tradi6onal emphasis on immersive fieldwork has similarly been augmented by significant studies involving laboratory and experimental work, computa6onal studies, and the re-purposing of secondary data. ...

Human Behavioral Ecology

... This has led to a more general, "coopera6ve breeding" model (Mace & Sear 2005) of "pooled [household] energy" (Kramer & Ellison 2010) that emphasizes sharing and coopera6on as general strategies for household subsistence, with who provides caring being more context-and household-specific . Regardless of where the data ul6mately fall, the example of gendered division of labor illustrates intersec6ons with numerous topical areas of focus in HBE: 6me alloca6on and social network data surrounding foraging and coopera6on reveal how dietary needs are actually met (Hames 1992); associa6ons between help and reproduc6on provide cri6cal tests of hypotheses surrounding the pace of childbearing (and its effects on child welfare) (Page et al. 2024); gendered divisions of labor can also help to understand the roots of wealth inequali6es and hierarchy (Mafson et al. 2023a,b); the dynamics of marriage and paren6ng are clearly 6ed to provisioning and subsistence dynamics. Indeed, a major strength of HBE is its interest in integra6ng topics and methods to generate nuanced interpreta6ons of societally important varia6on, from gender bias (Mace 1996;Mafson et al. 2016a), to gendered contribu6ons to households (Mar6n et al. 2024), to inequality (Mafson et al. 2016b) and health (Jaeggi et al. 2021), to climate change ) and many more. ...

Women's subsistence strategies predict fertility across cultures, but context matters

Proceedings of the National Academy of Sciences

... This is also evident in their proportion of pairs sharing an IBD segment across the genome, which reaches the highest level among all PFE (S4 Table in S1 File). However, the Hutterites have been extensively studied for more prevalent diseases within the population [40,41], whereas the Himba have not, despite their unique history and the precedence of increased homozygosity [42]. Our findings suggest that the Himba should be a center of interest in rare variant studies. ...

Increased homozygosity due to endogamy results in fitness consequences in a human population

Proceedings of the National Academy of Sciences

... a . 1 N + 1 found to be a predictor of reproductive success in many non-industrialised societies, at least for males (Von Rueden & Jaeggi, 2016;Ross et al., 2018Ross et al., , 2023. Although we know of no data on the differential fertility of twins vs. singletons in geminophilous societies, this mechanism is plausible. ...

Reproductive inequality in humans and other mammals

Proceedings of the National Academy of Sciences

... Second, normative restrictions on pre-or extra-marital sex constrain people's ability to benefit from a favourable marriage market. Premarital sex allows people entering the marriage market to learn about potential partners available to them while extramarital sex can make it easier to switch partners (Buss et al., 2017;Scelza and Prall, 2023). A double standard where men have more freedom to engage in both premarital and extramarital sex is common throughout the world, limiting women's access to information about available partners (Broude, 1980). ...

Only Death Will Separate Us: The Role of Extramarital Partnerships among Himba Pastoralists

... For women, this pattern was reversed but the difference was much smaller (openness) or non-significant (appeal) depending on the measure used. Unlike men, increased sexual access does not allow women to have more children (though it might increase offspring variability; see Scelza, 2022). As such, the small preference for polyandry over polygyny in women likely reflects differences in opportunities to enhance fitness through partner investment. ...

Marriage and Monogamy in Cross-Cultural Perspective
  • Citing Chapter
  • January 2023

... Others have highlighted sex differences in control over resources, ties with kin, and participation in warfare as explanations for status differentials between men and women (Garfield et al., 2019;Glowacki et al., 2020;Low, 1992;Reiter & Rapp, 1975;Smith et al., 2021;Yanca & Low, 2004). However, our understanding of women's status has also been hampered by the fact that most anthropological studies of status were historically conducted by male scientists, informed by male interlocutors, often presenting inaccurate or only partial accounts of women's roles (Fox et al., 2023;Post & Macfarlan, 2020;Reiter & Rapp, 1975;Weiner, 1976). As an example, in a sample of ethnographic texts from eHARAF, only 30 of 1212 texts across 59 non-industrial societies directly discuss female leadership . ...

New perspectives on the evolution of women's cooperation

... In an idealized outbred population, the F ROH expectation for the offspring of first cousins would be 0.0625, and F ROH calculated using a minimum threshold of 1,500 kb to call ROH is comparable to a pedigree estimate of inbreeding (14). The mean F ROH 1,500 of 2.6% observed in the Himba, and first reported in Swinford et al. (37), is therefore between the values expected for the offspring of second cousins and offspring of first cousins in an outbred population (15). However, this measure is not applicable to a population like the Himba who have elevated levels of IBD sharing (see below). ...

Examination of runs of homozygosity in relation to height in an endogamous Namibian population

American Journal of Biological Anthropology