Bernard Collet’s research while affiliated with French National Centre for Scientific Research and other places

Citation: Granger, T.; Michelitsch, T.M.; Bestehorn, M.; Riascos, A.P.; Collet, B.A. A Stochastic Compartment Model with Mortality and Its Application to Epidemic Spreading in Complex Networks. Entropy 2024, 26, 362. https://

We study epidemic spreading in complex networks by a multiple random walker approach. Each walker performs an independent simple Markovian random walk on a complex undirected (ergodic) random graph where we focus on Barabási-Albert (BA), Erdös-Rényi (ER) and Watts-Strogatz (WS) types. Both, walkers and nodes can be either susceptible (S) or infected and infectious (I) representing their states of health. Susceptible nodes may be infected by visits of infected walkers, and susceptible walkers may be infected by visiting infected nodes. No direct transmission of the disease among walkers (or among nodes) is possible. This model mimics a large class of diseases such as Dengue and Malaria with transmission of the disease via vectors (mosquitos). Infected walkers may die during the time span of their infection introducing an additional compartment D of dead walkers. Infected nodes never die and always recover from their infection after a random finite time. This assumption is based on the observation that infectious vectors (mosquitos) are not ill and do not die from the infection. The infectious time spans of nodes and walkers, and the survival times of infected walkers, are represented by independent random variables. We derive stochastic evolution equations for the mean-field compartmental populations with mortality of walkers and delayed transitions among the compartments. From linear stability analysis, we derive the basic reproduction numbers R M , R 0 with and without mortality, respectively, and prove that R M < R 0 . For R M , R 0 > 1 the healthy state is unstable whereas for zero mortality a stable endemic equilibrium exists (independent of the initial conditions) which we obtained explicitly. We observe that the solutions of the random walk simulations in the considered networks agree well with the mean-field solutions for strongly connected graph topologies, whereas less well for weakly connected structures and for diseases with high mortality. Our model has applications beyond epidemic dynamics, for instance in the kinetics of chemical reactions, the propagation of contaminants, wood fires, among many others.

Our study is devoted to a four-compartment epidemic model of a constant population of independent random walkers. Each walker is in one of four compartments (S-susceptible, C-infected but not infectious (period of incubation), I-infected and infectious, R-recovered and immune) characterizing the states of health. The walkers navigate independently on a periodic 2D lattice. Infections occur by collisions of susceptible and infectious walkers. Once infected, a walker undergoes the delayed cyclic transition pathway S $\to$ C $\to$ I $\to$ R $\to$ S. The random delay times between the transitions (sojourn times in the compartments) are drawn from independent probability density functions (PDFs). We analyze the existence of the endemic equilibrium and stability of the globally healthy state and derive a condition for the spread of the epidemics which we connect with the basic reproduction number $R_0>1$. We give quantitative numerical evidence that a simple approach based on random walkers offers an appropriate microscopic picture of the dynamics for this class of epidemics.

We study an epidemic model for a constant population by taking into account four compartments of the individuals characterizing their states of health. Each individual is in one of the following compartments: susceptible S; incubated, i.e., infected yet not infectious, C; infected and infectious I; and recovered, i.e., immune, R. An infection is visible only when an individual is in state I. Upon infection, an individual performs the transition pathway S→C→I→R→S, remaining in compartments C, I, and R for a certain random waiting time tC, tI, and tR, respectively. The waiting times for each compartment are independent and drawn from specific probability density functions (PDFs) introducing memory into the model. The first part of the paper is devoted to the macroscopic S−C−I−R−S model. We derive memory evolution equations involving convolutions (time derivatives of general fractional type). We consider several cases. The memoryless case is represented by exponentially distributed waiting times. Cases of long waiting times with fat-tailed waiting-time distributions are considered as well where the S−C−I−R−S evolution equations take the form of time-fractional ordinary differential equations. We obtain formulas for the endemic equilibrium and a condition of its existence for cases when the waiting-time PDFs have existing means. We analyze the stability of healthy and endemic equilibria and derive conditions for which the endemic state becomes oscillatory (Hopf) unstable. In the second part, we implement a simple multiple-random-walker approach (microscopic model of Brownian motion of Z independent walkers) with random S−C−I−R−S waiting times in computer simulations. Infections occur with a certain probability by collisions of walkers in compartments I and S. We compare the endemic states predicted in the macroscopic model with the numerical results of the simulations and find accordance of high accuracy. We conclude that a simple random-walker approach offers an appropriate microscopic description for the macroscopic model. The S−C−I−R−S–type models open a wide field of applications allowing the identification of pertinent parameters governing the phenomenology of epidemic dynamics such as extinction, convergence to a stable endemic equilibrium, or persistent oscillatory behavior.

We study an epidemic model for a constant population by taking into account four compartments of the individuals characterizing their states of health. Each individual is in one of the compartments susceptible (S); incubated - infected yet not infectious (C), infected and infectious (I), and recovered - immune (R). An infection is 'visible' only when an individual is in state I. Upon infection, an individual performs the transition pathway S to C to I to R to S remaining in each compartments C, I, and R for certain random waiting times, respectively. The waiting times for each compartment are independent and drawn from specific probability density functions (PDFs) introducing memory into the model. We derive memory evolution equations involving convolutions (time derivatives of general fractional type). We obtain formulae for the endemic equilibrium and a condition of its existence for cases when the waiting time PDFs have existing means. We analyze the stability of healthy and endemic equilibria and derive conditions for which the endemic state becomes oscillatory (Hopf) unstable. We implement a simple multiple random walker's approach (microscopic model of Brownian motion of Z independent walkers) with random SCIRS waiting times into computer simulations. Infections occur with a certain probability by collisions of walkers in compartments I and S. We compare the endemic states predicted in the macroscopic model with the numerical results of the simulations and find accordance of high accuracy. We conclude that a simple random walker's approach offers an appropriate microscopic description for the macroscopic model.

We introduce a compartment model with memory for the dynamics of epidemic spreading in a constant population of individuals. Each individual is in one of the states S=susceptible, I=infected, or R=recovered (SIR model). In state R an individual is assumed to stay immune within a finite-time interval. In the first part, we introduce a random lifetime or duration of immunity which is drawn from a certain probability density function. Once the time of immunity is elapsed an individual makes an instantaneous transition to the susceptible state. By introducing a random duration of immunity a memory effect is introduced into the process which crucially determines the epidemic dynamics. In the second part, we investigate the influence of the memory effect on the space-time dynamics of the epidemic spreading by implementing this approach into computer simulations and employ a multiple random walker's model. If a susceptible walker meets an infectious one on the same site, then the susceptible one gets infected with a certain probability. The computer experiments allow us to identify relevant parameters for spread or extinction of an epidemic. In both parts, the finite duration of immunity causes persistent oscillations in the number of infected individuals with ongoing epidemic activity preventing the system from relaxation to a steady state solution. Such oscillatory behavior is supported by real-life observations and not captured by the classical standard SIR model.

We introduce a modified SIR model with memory for the dynamics of epidemic spreading in a constant population of individuals. Each individual is in one of the states susceptible (${\bf S}$), infected (${\bf I}$) or recovered (${\bf R}$). In the state ${\bf R}$ an individual is assumed to stay immune within a finite time interval. In the first part, we introduce a random life time or duration of immunity which is drawn from a certain probability density function. Once the time of immunity is elapsed an individual makes an instantaneous transition to the susceptible state. By introducing a random duration of immunity a memory effect is introduced into the process which crucially determines the epidemic dynamics. In the second part, we investigate the influence of the memory effect on the space-time dynamics of the epidemic spreading by implementing this approach into computer simulations and employ a multiple random walker's model. If a susceptible walker meets an infectious one on the same site, then the susceptible one gets infected with a certain probability. The computer experiments allow us to identify relevant parameters for spread or extinction of an epidemic. In both parts, the finite duration of immunity causes persistent oscillations in the number of infected individuals with ongoing epidemic activity preventing the system from relaxation to a steady state solution. Such oscillatory behavior is supported by real-life observations and cannot be captured by standard SIR models.

We analyze the dynamics of a population of independent random walkers on a graph and develop a simple model of epidemic spreading. We assume that each walker visits independently the nodes of a finite ergodic graph in a discrete-time Markovian walk governed by his specific transition matrix. With this assumption, we first derive an upper bound for the reproduction numbers. Then, we assume that a walker is in one of the states: susceptible, infectious, or recovered. An infectious walker remains infectious during a certain characteristic time. If an infectious walker meets a susceptible one on the same node, there is a certain probability for the susceptible walker to get infected. By implementing this hypothesis in computer simulations, we study the space-time evolution of the emerging infection patterns. Generally, random walk approaches seem to have a large potential to study epidemic spreading and to identify the pertinent parameters in epidemic dynamics.