Alexandra Houston’s research while affiliated with United States Geological Survey and other places

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Publications (8)


Occupancy Dynamics of the Coastal California Gnatcatcher in Southern California
  • Technical Report
  • Full-text available

August 2024

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4 Reads

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Alexandra Houston

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Download


Map of California Gnatcatcher habitat in Ventura, Los Angeles, San Bernardino, Orange, Riverside, and San Diego counties as predicted by a habitat suitability model
Sources: [21, 29, 30].
Distribution of California Gnatcatcher survey points at the regional scale in Ventura, Los Angeles, San Bernardino, Orange, Riverside, and San Diego counties, CA in 2016
Sources: [29–32].
Distribution of California Gnatcatcher survey points at the subregional scale in San Diego and Orange counties, CA in 2016
Sources: [29–32].
Distribution of California Gnatcatcher survey points by year of last fire in San Diego County, CA in 2016
Sources: [29–33].
Average percent cover (+ SD) of vegetation species and cover types at regional points, 2016
See Table 2 for sample sizes.

+22

Rangewide occupancy of a flagship species, the Coastal California Gnatcatcher (Polioptila californica californica) in southern California: Habitat associations and recovery from wildfire

July 2024

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52 Reads

The Coastal California Gnatcatcher (Polioptila californica californica), a federally threatened species, is a flagship species for regional conservation planning in southern California (USA). An inhabitant of coastal sage scrub vegetation, the gnatcatcher has declined in response to habitat loss and fragmentation, exacerbated by catastrophic wildfires. We documented the status of gnatcatchers throughout their California range and examined post-fire recovery of gnatcatchers and their habitat. We used GIS to develop a habitat suitability model for Coastal California Gnatcatchers using climate and topography covariates and selected over 700 sampling points in a spatially balanced manner. Bird and vegetation data were collected at each point between March and May in 2015 and 2016. Presence/absence of gnatcatchers was determined during three visits to points, using area searches within 150 x 150 m plots. We used an occupancy framework to generate Percent Area Occupied (PAO) by gnatcatchers, and analyzed PAO as a function of time since fire. At the regional scale in 2016, 23% of the points surveyed were occupied by gnatcatchers, reflecting the effect of massive wildfires in the last 15 years. Similarly, PAO in the post-fire subset of points was 24%, with the highest occupancy in unburned (last fire <2002) habitat. Positive predictors of occupancy included percent cover of California sagebrush (Artemisia californica), California buckwheat (Eriogonom fasciculatum), and sunflowers (Encelia spp., Bahiopsis laciniata), while negative predictors included laurel sumac (Malosma laurina) and total herbaceous cover; in particular, non-native grasses. Our findings indicate that recovery from wildfire may take decades, and provide information to speed up recovery through habitat restoration.


Rangewide occupancy of a flagship species, the California Gnatcatcher (Polioptila californica) in southern California: habitat associations and recovery from wildfire

February 2024

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19 Reads

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1 Citation

The California Gnatcatcher (Polioptila californica), a federally threatened species, is a flagship species for regional conservation planning in southern California (USA). An inhabitant of coastal sage scrub vegetation, the gnatcatcher has declined in response to habitat loss and fragmentation, exacerbated by catastrophic wildfires. We documented the status of gnatcatchers throughout their California range and examined post-fire recovery of gnatcatchers and their habitat. We used GIS to develop a habitat suitability model for California Gnatcatchers using climate and topography covariates and selected over 700 sampling points in a spatially balanced manner. Bird and vegetation data were collected at each point between March and May in 2015 and 2016. Presence/absence of gnatcatchers was determined during three visits to points, using area searches within 150 x 150 m plots. We used an occupancy framework to generate Percent Area Occupied (PAO) by gnatcatchers, and analyzed PAO as a function of time since fire. At the regional scale in 2016, 23% of the points surveyed were occupied by gnatcatchers, reflecting the effect of massive wildfires in the last 15 years. Similarly, PAO in the post-fire subset of points was 24%, with the highest occupancy in unburned (last fire <2002) habitat. Positive predictors of occupancy included percent cover of California sagebrush (Artemisia californica), California buckwheat (Eriogonom fasciculatum), and sunflowers (Encelia spp., Bahiopsis laciniata), while negative predictors included laurel sumac (Malosma laurina) and total herbaceous cover; in particular, non-native grasses. Our findings indicate that recovery from wildfire may take decades, and provide information to speed up recovery through habitat restoration.





Figure. 1. Location of the Monitoring Avian Productivity and Survivorship (MAPS) banding station, Naval Outlying Landing Field (NOLF), Imperial Beach, southwestern San Diego County, California.  
Figure 2. Net locations at Monitoring Avian Productivity and Survivorship (MAPS) banding station, Naval Outlying Landing Field (NOLF), Imperial Beach, southwestern San Diego County, California.  
Figure 3. Adult population trends for four year-round resident bird species (Wrentit, Orange-crowned Warbler, Common Yellowthroat, and Song Sparrow) and two migratory bird species (Least Bell's Vireo and Yellow Breasted Chat) at Naval Outlying Landing Field, Imperial Beach, southwestern San Diego County, California, 2009–13. See appendix A for common and scientific names.  
Figure 4. Annual productivity of six bird species captured and precipitation measured for the associated bio-year (July 1–June 30) at Naval Outlying Landing Field, Imperial Beach, southwestern San Diego County, California, 2009–13. Productivity is calculated as the number of juveniles (HY=hatching-year) divided by the number of adults (AHY=after hatching-year). A solid line represents a year-round resident species (including species considered Neotropical migratory species under the Neotropical Migratory Bird Conservation Act of 2000; appendix A, table A1), and a dashed line represents a migratory species that was not a year-round resident.  
Figure B1. Number of individuals captured per species per 100 net-hours at Naval Outlying Landing Field, Imperial Beach, 2009-13. Species that accounted for 5 percent or more of the individuals captured in 1 or more years were given colored bars to track annual variation. Solid colored bars are year-round residents (including species considered Neotropical migrants under the Neotropical Migratory Bird Conservation Act of 2000), and cross-hatched bars are migratory species. Bushtit, Common Yellowthroat, Orange-crowned Warbler, and Song Sparrow each constituted more than 5 percent of the captures each year. See appendix A for common and scientific names.
Lynn, Suellen, Madden, Melanie, Houston, Alex, and Kus, B.E., 2015, Monitoring avian productivity and survivorship (MAPS) 5-year summary, Naval Outlying Landing Field, Imperial Beach, southwestern San Diego County, California, 2009–13.

March 2015

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210 Reads

During 2009–13, a Monitoring Avian Productivity and Survivorship (MAPS) banding station was operated at the Naval Outlying Landing Field (NOLF), Imperial Beach, in southwestern San Diego County, California. The station was established as part of a long-term monitoring program of Neotropical migratory bird populations on NOLF and helps Naval Base Coronado (NOLF is a component) meet the goals and objectives of Department of Defense Partners in Flight program and the Birds and Migratory Birds Management Strategies of the Naval Base Coronado Integrated Natural Resources Management Plan. During 2009–13, captures averaged 644 ±155 per year. Fifty-seven species were captured, of which 44 are Neotropical migratory species and 33 breed at the MAPS station. Twenty-two sensitive species were detected, including Least Bell’s Vireo (Vireo bellii pusillus), Willow Flycatcher (Empidonax traillii), Yellow-breasted Chat (Icteria virens) and Yellow Warbler (Setophaga petechia). Local population trends varied among species and years, as did annual productivity (number of young per adult). We found no significant relationship between productivity and the observed population size in the subsequent year for any species, nor did we find an association between productivity and precipitation for the current bio-year. Similarly, survivorship varied across species and years, and there was no obvious relationship between adult survivorship and observed population size for any species except Wrentit (Chamaea fasciata), for which the relationship was positive. Adult survivorship was unrelated to precipitation at the MAPS station. Additional years of data will be required to generate sample sizes adequate for more rigorous analyses of survivorship and productivity as predictors of population growth.

Citations (2)


... It is particularly encouraging that all these observations included at least one singing male, despite the short distance natal dispersal of males reported by Franzreb (1989). However, more recent work showed that, although first year males typically disperse about half as far as females, they are capable of much longer dispersal distances than previously thought (Greaves and Labinger 1997, Kus et al 2022, Vandergast et al. 2024, Houston et al. 2024. ...

Reference:

Current Breeding Season Status of the Least Bell's Vireo in California's Central Valley and Surrounding Foothills
Least Bell's Vireos and Southwestern Willow Flycatchers at the San Luis Rey Flood Risk Management Project Area in San Diego County, California: Breeding Activities and Habitat Use-2023 Annual Report

... We explored the genetic structure of the data set with a Spatial Principal Component Analysis (sPCA) analyzed using the function sPCA from the R package Adegenet 2.13 (Jombart, 2008). We set the function to build a distance-based connection network with neighbors within a Euclidean distance between one and 26.4km based on the maximum dispersal distance recorded for Cactus Wren (Lynn et al., 2022). The components of the sPCA are separated into global (positive eigenvalues) and local (negative eigenvalues) structures. ...

Distribution and demography of Coastal Cactus Wrens in Southern California, 2015–19.