Alena Skálová’s research while affiliated with Charles University in Prague and other places

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Publications (294)


Atypical and pseudomalignant features of salivary pleomorphic adenoma: a clinicopathologic study
  • Article

May 2025

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6 Reads

Oral Surgery Oral Medicine Oral Pathology and Oral Radiology

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Michal

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Alena Skálová

Oncocytic Tumors in the Salivary Gland: Cytopathological, Pathological, and Molecular Features

April 2025

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40 Reads

Acta Cytologica

Background: Primary oncocytic salivary gland tumors and oncocytic subtypes of traditionally non-oncocytic salivary gland neoplasms are occasionally encountered in fine needle aspiration specimens, biopsies, and resections. Oncocytes are cells, either non-neoplastic or neoplastic, containing increased numbers of mitochondria resulting in cells with abundant eosinophilic cytoplasm and a low N/C ratio. Summary: A broad range of salivary gland tumors can be oncocytic including oncocytoma, Warthin tumor, mucoepidermoid carcinoma, salivary duct carcinoma, and others, especially those tumors where the oncocytic pattern represents a subtype of neoplasm; the oncocytic pattern can create a diagnostic challenge due to marked similarities in the oncocytic pattern of cells. Key messages: While their microscopic cytologic and histologic features may be similar, these tumors differ intrinsically at the molecular level. Ancillary studies such as immunologic (e.g., androgen receptor for salivary duct carcinoma) and molecular analysis, e.g., FISH for detecting the MAML2 or PLAG1/HMGA2 gene alterations in mucoepidermoid carcinoma and pleomorphic adenoma, respectively, can be used to classify these oncocytic tumors in difficult cases.


Expanding the Molecular-genetic Spectrum of Canalicular Adenoma-like Subtype of Pleomorphic Adenoma of Salivary Glands
  • Article
  • Full-text available

March 2025

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16 Reads

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1 Citation

The American Journal of Surgical Pathology

Canalicular tumors of the salivary glands have recently emerged as an entity characterized by distinct morphology and recurrent HMGA2 gene rearrangement. In this study, we analyzed 40 cases intending to elucidate their features further. The monophasic or biphasic tumors exhibited a growth pattern of interconnected anastomosing trabeculae and canaliculi, accompanied by a classical pleomorphic adenoma in one-third of the cases. Invasive growth into surrounding adipose tissue was revealed in one case which was, therefore, diagnosed as epithelial-myoepithelial carcinoma. Although the tumor cells uniformly expressed HMGA2 protein in all cases, cytokeratin 7, S100 protein, and SOX10 displayed either diffuse positivity or highlighted the luminal and abluminal cell populations, respectively. Areas with morphological oncocytoid change and AR-immunopositivity of luminal cells were seen in 13/14 (93%) of tested biphasic cases. HMGA2 rearrangement was detected by RNA-sequencing in 30 cases. The most common alteration was an HMGA1::WIF1 fusion, but several novel or rare fusion partners were identified, including ARID2, FHIT, MSRB3 and its antisense variant MSRB3-AS1, IFNG-AS1, and the long intergenic region LINC02389. In addition, FISH revealed HGMA2 break-apart in the remaining 10 cases where targeted sequencing failed to detect any alteration or where RNA sequencing could not be performed. Notably, the loss of the 3'-untranslated region of HMGA2 emerges as the common denominator for the described rearrangements, possibly disrupting its negative regulation by small regulatory RNAs. Awareness of this lesion ensures appropriate diagnosis and clinical management, especially with regard to the possibility of malignant transformation described in this and previous studies.

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Less common growth patterns included trabecular (A), single cells/single cell lines (B), or macrocystic/pulmonary edema like (C). In ten cases, pseudoglandular architecture was present. In the depicted case, the glandular structures were peripherally composed of small cells with reduced, almost imperceptible cytoplasm, while the centrally located cells had eosinophilic cytoplasm, corresponding to tubular hypereosinophilia (D). Other rare patterns were pseudopapillary (E), glomeruloid (F), tissue culture-like (G), and two cases created microlumens (H)
The spectrum of tumor cells varied, less common variants included clear cells with watery clear cytoplasm (top) and clear vacuolated cells/signet ring cells with excentric nuclei (bottom) (A). Squamous cells were present in four cases with keratin pearls and giant cell reaction in one case (B). Sebaceous cells were noted in two cases (C), and in one case were present large cells with eccentric, mildly eosinophilic cytoplasm forming tubules and small nests (D). Two cases exhibited features of myoepithelial carcinoma, in cases with a lobulated pattern, characterized by a hypercellular periphery and a hypocellular center (E). Tubular hypereosinophilia was present in 14 cases (F)
SH/REAH represent a continuum of lesions, with REAH glands showing sprouting of SH from their sides (A). SH usually retains a lobular architecture or is organized in small clusters, with the inner layer occasionally displaying coarse cytoplasmic granules (B). SH is positive for SOX10, while REAH is negative (C). p63/p40 is usually incompletely expressed in SH, reflecting its irregular and often missing myoepithelial layer, whereas it is consistently positive in myoepithelial portion of REAH (star) (D)
The ASGSH glands lost lobular arrangement typical for SH and were characterized by irregular and often discontinuous two-cell layers (A). ASGSH showed typical intraluminal cytoplasmic protrusions and contained material of different density in their lumens (B). The nuclei showed size and shape irregularities, were occasionally hyperchromatic, and in some cases, lost their polarity. ASGSH glands had a rounded or, more often, irregularly angulated and branched shape (right) (C)
Abluminal cells of ASGSH were positive for p63, p40 (A), while luminal cells had reverse immunoexpression and were positive for CK7 (B). SOX10 was nuclear positive in AdCC (right) and SH/ASGHS (center) while negative in REAH (left) (C). The S100 protein effectively distinguished between SH and ASGSH glands, which were positive and dispersed as residual structures within the AdCC component, which was negative (D)

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Sinonasal adenoid cystic carcinomas accompanied by seromucinous hamartoma and/or atypical sinonasal glands arising from seromucinous hamartoma: insight into their histogenesis

February 2025

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41 Reads

Virchows Archiv

The pathology of reactive, dysplastic, and neoplastic sinonasal seromucinous glands is complex, and their contribution to tumorigenesis of sinonasal carcinomas remains controversial. In our practice, we have observed the presence of respiratory epithelial adenomatoid hamartomas (REAH) and seromucinous hamartomas (SH) associated with adenoid cystic carcinomas (AdCC) in a subset of cases. In many of these cases, genuine atypical features and dysplastic characteristics of the glands were noted at the interface of SH and AdCC. To investigate this phenomenon further, 88 sinonasal AdCC cases were selected from the authors’ files and analyzed histologically, immunohistochemically, and genetically searching for MYB/MYBL1 and NFIB gene fusions. HPV testing was also performed. Univariate statistical analysis was conducted on our cohort. Thirty-one cases (35%) showed features of atypical sinonasal glands arising in SH (ASGSH) at the SH-AdCC interface, characterized by bilayered epithelium, architectural disarray, mild nuclear polymorphism, and atypia, sometimes with colloid-like material in the lumen. The MYB immunomarker was negative in 14 ASGSHs (with a positive internal control in AdCC cells), while only two cases showed faint and moderate to weak expression of the antibody in ASGSH glands. In 12 cases, the immunostaining of ASGSH could not be properly assessed, while AdCC cells were negative. The immunostaining was not performed in five cases. Our findings suggest that a subset of sinonasal AdCC may originate in a multistep dysplastic process within SH, consistent with an SH-ASGSH-AdCC progression sequence.


Citations (64)


... In one case, an alteration in the FAT1 (Pro-1665Leu) gene was found. Recent studies have suggested that SH/REAH and ASGSH may participate in a multistep dysplastic process leading to the development of sinonasal malignancies, including low-grade tubulopapillary adenocarcinomas (19), recently described subset of sinonasal adenosquamous carcinoma (49) and the AdCC depicted in this study. ...

Reference:

Sinonasal adenoid cystic carcinomas accompanied by seromucinous hamartoma and/or atypical sinonasal glands arising from seromucinous hamartoma: insight into their histogenesis
Sinonasal adenosquamous carcinomas arising in seromucinous hamartoma or respiratory epithelial adenomatoid hamartoma with atypical features: Report of five detailed clinicopathological and molecular characterisation of rare entity

Histopathology

... While the most common malignant components of Ca ex PA are SDC, myoepithelial carcinoma (MECA), and adenocarcinoma not otherwise specified (NOS), other types of SGCs have also been identified. Genetic alterations in the pleomorphic adenoma gene 1 (PLAG1) and the high-mobility group AT-hook 2 (HMGA2) genes are frequently seen in both PAs and Ca ex PAs, although these alterations are not typical of primary SDC, MECA, or adenocarcinoma NOS [90,91]. The alterations reported in the SDC subtype are amplification in HMGA2, MDM2, and ERBB2 (HER2) [92]. ...

Expanding the Molecular Spectrum of Carcinoma Ex Pleomorphic Adenoma: An Analysis of 84 Cases With a Novel HMGA2::LINC02389 Fusion
  • Citing Article
  • September 2024

The American Journal of Surgical Pathology

... Additionally, NGS revealed novel non-canonical fusion transcripts: ACTBex3::MYBex3; ACTN4ex18::MYBex2; ESRRGex3::DNM3ex14; and EWSR1ex6::MYBex2. Each of these was previously reported by our group (36). . The molecular genetic data are detailed in our partner paper, which is currently in the second round of review. ...

Discovery of Novel TULP4/ACTN4/EWSR1/ACTB::MYB and ESRRG::DNM3 Fusions Expands Molecular Landscape of Adenoid Cystic Carcinoma Beyond Fusions Between MYB/MYBL1 and NFIB Genes

The American Journal of Surgical Pathology

... it is also important in terms of prognosis and therapy [3]. SCC accounts for more than 90% of all malignant tumours, making it both the most significant and frequent malignant mucosal tumour to affect the head and neck [4]. ...

Metastatic cutaneous squamous cell carcinoma accounts for nearly all squamous cell carcinomas of the parotid gland

Virchows Archiv

... Tumors of the nasal cavity and paranasal sinuses are rare (account for 1-3% of malignant tumors of all localizations) and heterogeneous neoplasms that characterized by multifactorial etiology, including genetic predisposition (association with HLA-B17, HLA-Bw26), environmental factors and chronic viral infection (human papillomavirus, Epstein-Barr virus, etc.) [1,2,3]. Although tumors of nasal cavity and paranasal sinuses are presented with different histological features and clinical behavior, squamous cell carcinoma accounts for 90% of head and neck cancer [4]. ...

Molecularly defined sinonasal malignancies: an overview with focus on the current WHO classification and recently described provisional entities

Virchows Archiv

... Pleomorphic adenoma of the salivary glands typically harbors recurrent translocations or intrachromosomal rearrangements, leading to gene fusions involving Pleomorphic Adenoma Gene 1 (PLAG1) in more than 50% of cases and High Mobility Group AT-hook 2 (HMGA2) in approximately 10%-15%. 69 In cutaneous mixed tumors, gene rearrangements involving PLAG1 and HMGA2 have been identified, playing a crucial role in the tumorigenesis of these neoplasms. 70 PLAG1, located on 8q12, is a proto-oncogene, and its overexpression is primarily driven by translocations that place the PLAG1 gene under the control of active promoters of ubiquitously expressed genes such as CTNNB1 or leukemia inhibitory factor receptor. ...

Molecular pathology in diagnosis and prognostication of head and neck tumors

Virchows Archiv

... glands arising in SH (ASGSH) as described previously by our group (15). The conjecture that SH/REAH represents rather a neoplastic sinonasal lesion than a hamartoma was described in few studies (16)(17)(18). ...

Nasal and sinonasal tumors formed by atypical adenomatous lesions arising in respiratory epithelial adenomatoid hamartoma/seromucinous hamartoma

Virchows Archiv

... [4][5][6] The first example of SMARCB1/INI1-deficient neoplasm with YST differentiation was reported in a sinonasal location, 7 followed by additional similar cases reported at the same location. 4,[8][9][10][11] SMARCB1/INI1-deficient tumours have also been documented in the female genital tract, particularly in the vulvar region, and include epithelioid sarcoma (either classical or proximal-type), myoepithelial carcinoma, myoepithelioma-like tumours and myxoepithelioid tumour with chordoid features. [12][13][14] Kolin et al. recently reported three SMARCB1/INI1-deficient tumours with YST morphology in a vulvar location. ...

SMARCB1-deficient sinonasal adenocarcinoma: a rare variant of SWI/SNF-deficient malignancy often misclassified as high-grade non-intestinal-type sinonasal adenocarcinoma or myoepithelial carcinoma

Virchows Archiv

... Branchioma, also referred to as biphenotypic branchioma, is a benign neoplasm with almost exclusive predilection to the lower anterior neck at the area of sternoclavicular junction. It is thought to arise from branchial pouch derivatives, and histologically displays a mixed proliferation of spindled, epithelial and adipose tissue [1,2]. Prior terminology of this entity includes ectopic hamartomatous thymoma and thymic anlage tumor, but branchiomas have no true thymic differentiation [2]. ...

Branchioma: immunohistochemical and molecular genetic study of 23 cases highlighting frequent loss of retinoblastoma 1 immunoexpression

Virchows Archiv

... They show an aggressive, highly metastatic behavior. They have a mixed round and spindle cell morphology and an unusual immunophenotype, often presenting a mixture of neuroendocrine or epithelial markers [16,21,22]. ...

EWSR1::POU2AF3(COLCA2) Sarcoma: An aggressive, polyphenotypic sarcoma with a head and neck predilection

Modern Pathology