Adam Lammert’s research while affiliated with College of the Holy Cross and other places

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Publications (105)


Figure 1: Illustration of the experimental protocol. Subjects listen to a sequence of randomly-generated auditory stimuli, each preceded by a target tinnitus-like sound. Subjects make a subjective judgment over the stimulus relative to the target sound, responding either "yes" or "no", in light of the specific instruction set given to them. The resulting collection of all stimulus-response pairs is used to form an estimate of the target.
Figure 3: Scatter plot showing the distribution of Pearson's r -a measure of RC estimation quality -for each instruction set as gray circles. Black circles indicate the mean value, and black lines indicate the upper and lower edge of the 95% confidence interval.
Subject Instructions for Improved Characterization of Auditory Representations Using Reverse Correlation
  • Preprint
  • File available

October 2024

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22 Reads

Gidey W. Gezae

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Adam C. Lammert

Reverse Correlation (RC) is an established method for reconstructing auditory representations, that has recently emerged as a tool for characterizing the sounds experienced by tinnitus patients. Toward further optimizing RC for auditory research, the present work investigated the influence of subject instructions on characterization quality of tinnitus-like sounds. A validation study was conducted in which eighteen normal-hearing subjects were randomly assigned one of three candidate instruction sets, each inspired by the RC literature. Results show a significant effect of instruction set on characterization quality, and reveal that instructing subjects to detect a hidden signal in the RC stimuli resulted the best reconstruction.

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Reverse Correlation Characterizes More Complete Tinnitus Spectra in Patients

July 2024

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14 Reads

IEEE Open Journal of Engineering in Medicine and Biology

italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">Goal: We validate a recent reverse correlation approach to tinnitus characterization by applying it to individuals with clinically-diagnosed tinnitus. Methods: Two tinnitus patients assessed the subjective similarity of their non-tonal tinnitus percepts and random auditory stimuli. Regression of the responses onto the stimuli yielded reconstructions which were evaluated qualitatively by playing back resynthesized waveforms to the subjects and quantitatively by response prediction analysis. Results: Subject 1 preferred their resynthesis to white noise; subject 2 did not. Response prediction balanced accuracies were significantly higher than chance across subjects: subject 1: 0.5963, subject 2: 0.6922. Conclusion: Reverse correlation can provide the foundation for reconstructing accurate representations of complex, non-tonal tinnitus in clinically diagnosed subjects. Further refinements may yield highly similar waveforms to individualized tinnitus percepts.


Fig. 1 Schematic overview of perception. At its most fundamental level, perception is maintained by a complex cognitive system in the perceiver, involving the combined efforts of bottom-up and top-down processes that bridge the gap between sensory input and cognitive representations. Bottom-up processes extract relevant features from
Fig. 2 Process of reconstruction in reverse correlation and compressive sensing. (A) In reverse correlation, the vector of subject responses is modeled as resulting from the multiplication of a latent representation vector (x) and a stimulus matrix (Φ), where each row of Φ is a presented stimulus. This can be thought of as a similarity calculation between the latent representation and a vector representation of each presented stimulus. (B) An estimate of the latent representation ( ̂ x ) is then reconstructed by regressing responses against the stimuli. (C) In compressive sensing, the vector of subject responses is modeled as resulting from the multiplication of a sparse latent representation vector (s) and a compressive sensing matrix (Θ). The compressive sensing matrix is formed by multiplying a matrix of basis
Fig. 3 Comparison of conventional regression-based estimation and compressive sensing estimation. The template image (A) of the "S" from Gosselin & Schyns (2003) is estimated in (B-E). An example noise stimulus is shown in (F). The method of estimation and number of samples used (n) is indicated below the image. The correla-
A compressive sensing approach for inferring cognitive representations with reverse correlation

December 2023

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75 Reads

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2 Citations

Behavior Research Methods

Uncovering cognitive representations is an elusive goal that is increasingly pursued using the reverse correlation method, wherein human subjects make judgments about ambiguous stimuli. Employing reverse correlation often entails collecting thousands of stimulus-response pairs, which severely limits the breadth of studies that are feasible using the method. Current techniques to improve efficiency bias the outcome. Here we show that this methodological barrier can be diminished using compressive sensing, an advanced signal processing technique designed to improve sampling efficiency. Simulations are performed to demonstrate that compressive sensing can improve the accuracy of reconstructed cognitive representations and dramatically reduce the required number of stimulus-response pairs. Additionally, compressive sensing is used on human subject data from a previous reverse correlation study, demonstrating a dramatic improvement in reconstruction quality. This work concludes by outlining the potential of compressive sensing to improve representation reconstruction throughout the fields of psychology, neuroscience, and beyond. Supplementary Information The online version contains supplementary material available at 10.3758/s13428-023-02281-4.


Reverse Correlation Characterizes More Complete Tinnitus Spectra in Patients

October 2023

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50 Reads

Goal We validate a recent reverse correlation approach to tinnitus characterization by applying it to individuals with clinically-diagnosed tinnitus. Methods Two tinnitus patients assessed the subjective similarity of their non-tonal tinnitus percepts and random auditory stimuli. Regression of the responses onto the stimuli yielded reconstructions which were evaluated qualitatively by playing back resynthesized waveforms to the subjects and quantitatively by response prediction analysis. Results Subject 1 preferred their resynthesis to white noise; subject 2 did not. Response prediction balanced accuracies were significantly higher than chance across subjects: subject 1: 0.5963, subject 2: 0.6922. Conclusion Reverse correlation can provide the foundation for reconstructing accurate representations of complex, non-tonal tinnitus in clinically diagnosed subjects. Further refinements may yield highly similar waveforms to individualized tinnitus percepts. Impact Statement Characterization of tinnitus sounds can help clarify the heterogeneous nature of the condition and link etiology to subtypes and treatments.



Multitask Deep Learning Methods for Improving Human Context Recognition From Low Sampling Rate Sensor Data

August 2023

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10 Reads

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2 Citations

IEEE Sensors Journal

High-fidelity sensor data gathered at high sampling rates is required by Human Context Recognition (HCR) to accurately predict the users’ current context. This approach consumes a significant amount of energy and increases the likelihood of uninstallation. Prior work addressed energy scarcity by reducing smartphone sensor sampling rates, which in turn reduces HCR accuracy. Up-sampling or domain adaptation techniques were then introduced to maximize HCR accuracy from sensor data with low-sampling rates. These solutions, however, are only applicable if high sampling rates of data from all context classes can be gathered from the target population, which is not realistic in a real-world application. Alternatively, the learning of HCR on multiple datasets with different sampling rates and labels is proposed in this study. We address the problem as a dataset shift problem to improve the learning of the low-sampling rate HCR dataset using information augmented from a high-sampling dataset, collected under various setups (labels, mobile devices, and population). To reduce the discrepancy of feature distribution between sampling rates and dataset domains, we propose Maximum Mean Discrepancy-based Multi-Task Learning (MMD-MTL), which innovatively introduces MMD into MTL to address the covariance shift between sampling rates within the same dataset and the dataset shift between multiple HCR datasets. In rigorous evaluation, using an external HCR dataset that gathered sensor data at 50Hz from various sets of populations, devices, and HCR labels, MMD-MTL was found to significantly increase the HCR accuracy of a crowdsourced dataset that was sampled at a rate of 5Hz up to 74%.


Reverse Correlation Uncovers More Complete Tinnitus Spectra

May 2023

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30 Reads

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4 Citations

IEEE Open Journal of Engineering in Medicine and Biology

italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">Goal: This study validates an approach to characterizing the sounds experienced by tinnitus patients via reverse correlation, with potential for characterizing a wider range of sounds than currently possible. Methods: Ten normal-hearing subjects assessed the subjective similarity of random auditory stimuli and target tinnitus-like sounds (“buzzing” and “roaring”). Reconstructions of the targets were obtained by regressing subject responses on the stimuli, and were compared for accuracy to the frequency spectra of the targets using Pearson's r . Results: Reconstruction accuracy was significantly higher than chance across subjects: buzzing: 0.52±0.270.52 \pm 0.27 (mean ±\pm s.d.), t(9)=5.766t(9) = 5.766 , p<0.001p < 0.001 ; roaring: 0.62±0.230.62 \pm 0.23 , t(9)=5.76t(9) = 5.76 , p<0.001p < 0.001 ; combined: 0.57±0.250.57 \pm 0.25 , t(19)=7.542t(19) = 7.542 , p<0.001p < 0.001 . Conclusion: Reverse correlation can accurately reconstruct non-tonal tinnitus-like sounds in normal-hearing subjects, indicating its potential for characterizing the sounds experienced by patients with non-tonal tinnitus.


Masking Kernel for Learning Energy-Efficient Speech Representation

February 2023

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16 Reads

Modern smartphones are equipped with powerful audio hardware and processors, allowing them to acquire and perform on-device speech processing at high sampling rates. However, energy consumption remains a concern, especially for resource-intensive DNNs. Prior mobile speech processing reduced computational complexity by compacting the model or reducing input dimensions via hyperparameter tuning, which reduced accuracy or required more training iterations. This paper proposes gradient descent for optimizing energy-efficient speech recording format (length and sampling rate). The goal is to reduce the input size, which reduces data collection and inference energy. For a backward pass, a masking function with non-zero derivatives (Gaussian, Hann, and Hamming) is used as a windowing function and a lowpass filter. An energy-efficient penalty is introduced to incentivize the reduction of the input size. The proposed masking outperformed baselines by 8.7% in speaker recognition and traumatic brain injury detection using 49% shorter duration, sampled at a lower frequency.


ADL-GAN: Data Augmentation to Improve In-the-wild ADL Recognition using GANs

January 2023

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44 Reads

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5 Citations

IEEE Access

The types of Activities of Daily Living (ADL) a person performs or avoids, and underlying patterns can provide insights into physical and mental health, making passive ADL recognition from smartphone sensor data important. However, as people perform ADLs unequally in real life, ADL datasets collected in the wild can be extremely imbalanced, which presents a challenge to Machine Learning (ML) ADL classification. Prior solutions to mitigating imbalance, such as oversampling and instance weighting, reduce but do not completely eliminate the problem. We instead propose ADL-GAN, which utilizes translation Generative Adversarial Networks (GANs), to synthesize smartphone motion and audio sensor data to improve ADL classification performance. ADL-GANs augment the minority ADL of subject A by translating real samples from either 1) other ADLs where subject A has adequate data in Context-transfer ADL-GAN or 2) other subjects with adequate ADL data in Subject-transfer ADL-GAN . ADL-GANs utilize multi-domain and contrastive loss functions to perform many-to-many translations between ADL classes and subjects, respectively. Subject-transfer ADL-GAN outperformed baselines and improved balanced accuracy (BA) on an in-the-wild ADL dataset by 27.9 %, while context-transfer ADL-GAN performed best on a scripted dataset, improving the BA of baselines by 9.58 %. The augmented samples from ADL-GANs were shown to be more realistic and diverse than conditional GAN.


Fig. 1. Diagram of the experimental protocol. Subjects listen to a series of random stimuli, each preceded by a target sound. Subjects compare the stimulus to the target, and respond either "yes" or "no" depending on their perceived similarity. The recorded stimulusresponse pairs are used to form an estimate of the target using a restricted regression procedure.
Reverse Correlation Uncovers More Complete Tinnitus Spectra

December 2022

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41 Reads

Goal This study validates a method for characterizing the sounds experienced by tinnitus patients with potential for characterizing a wider range of sounds than currently possible. The approach is based on reverse correlation, an established behavioral method widely used in psychophysics for unconstrained characterization of internal perceptual representations. Methods Ten normal-hearing subjects participated in a reverse correlation experiment, where they assessed the subjective similarity of random auditory stimuli and target tinnitus-like sounds (“buzzing” and “roaring”). Reconstructions of the targets were obtained by regressing subject responses on the stimuli, and were compared for accuracy to the frequency spectra of the targets using Pearson’s r . Results Reconstruction accuracy was significantly higher than chance across subjects: buzzing ( M = 0.53, SD = 0.27): t (9) = 5.766, p < 0.001; roaring ( M = 0.57, SD = 0.30): t (9) = 5.76, p < 0.001. Conclusion Reverse correlation can accurately reconstruct non-tonal tinnitus-like sounds in normal-hearing subjects, indicating its potential for characterizing the sounds experienced by patients with non-tonal tinnitus. Impact Statement Characterization of tinnitus can inform tinnitus treatment by allowing for individualized sound therapies, leading to better outcomes for patients suffering from the cognitive and psychological effects of tinnitus.


Citations (72)


... ; https://doi.org/10.1101/2022.12.23.521795 doi: bioRxiv preprint noisy responses are universally observed in applications of RC, this situation may nonetheless be improved by optimizing the experimental protocol, stimulus generation, and reconstruction method, none of which are guaranteed optimal in this earlystage validation study. For example, recent approaches to improving RC reconstruction methods have been shown to boost the efficiency, noise robustness and overall accuracy of RC [32], [33], and may also be applicable in the context of tinnitus. ...

Reference:

Reverse Correlation Uncovers More Complete Tinnitus Spectra
A compressive sensing approach for inferring cognitive representations with reverse correlation

Behavior Research Methods

... stimuli and subjective responses [15]- [17]. Recent work has shown that RC works well for reconstructing the frequency spectra of tinnitus-like percepts in healthy controls [18]. Here, we assess the viability of RC for reconstructing tinnitus spectra in clinically-diagnosed tinnitus subjects. ...

Reverse Correlation Uncovers More Complete Tinnitus Spectra

IEEE Open Journal of Engineering in Medicine and Biology

... Recent studies [15] [16] [17] have proposed advanced methods such as Generative Adversarial Network (GAN) to generate synthetic sensor data. GANs can be computationally expensive and require a significant amount of training data and time to generate high-quality synthetic data. ...

ADL-GAN: Data Augmentation to Improve In-the-wild ADL Recognition using GANs

IEEE Access

... The rehabilitation process in post-stroke patients must be scheduled and sustainable to accelerate the healing process [1] [2]- [9]. If the rehabilitation process is not carried out continuously, it can cause muscle shrinkage [10]. ...

Compliance With In-Home Self-Managed Rehabilitation Post-Stroke is Largely Independent of Scheduling Approach
  • Citing Article
  • November 2022

Archives of Physical Medicine and Rehabilitation

... QMS is conducive to remote studies because it can be implemented using speech recordings obtained in the home environment on personal electronic devices (smartphones, tablets, or computers), allowing frequent, simple data collection. In ALS, QMS has focused on speaking rate (SR; words/minute), articulation rate (AR; syllables/second), and speech pause analysis (SPA) to identify speech abnormalities, which in some instances, can be detected even before people with ALS (PALS) or their speech and language pathologists (SLPs) are aware of them (4,(6)(7)(8)(9)(10). However, each of these features may be insufficient to quantify ALS progression over time. ...

The efficacy of acoustic-based articulatory phenotyping for characterizing and classifying four divergent neurodegenerative diseases using sequential motion rates

Journal of Neural Transmission

... • Speech recognition [73,102,52]. In speech recognition, we use CIL to enhance precision when specific speech patterns, accents, less frequent words, or phrases are underrepresented, providing a more inclusive and resilient system capable of adeptly managing a variety of linguistic characteristics, which is particularly valuable in multilingual settings or specialized domains like medicine or technology. ...

ADL-GAN: Data Augmentation to Improve In-the-Wild ADL Recognition Using GANs
  • Citing Article
  • January 2022

SSRN Electronic Journal

... Reconstruction accuracies observed here are below the simulated ideal, which may be attributed to noisy responses universally observed in applications of RC, and which may be mitigated by further optimizing the experimental protocol, stimulus generation, and reconstruction method. For example, recent approaches to improving RC reconstruction methods can boost efficiency, noise robustness and overall accuracy [22]. Fig. 2. Human reconstruction accuracy is significantly above baseline, but is not optimal. ...

Stimulus whitening improves the efficiency of reverse correlation

Behavior Research Methods

... The primary uses of AI discussed within publications analysed were diagnosis and prediction of outcomes. Diagnostic studies focused on identifying brain injury sub-types (Rosenblatt et al., 2022), identifying markers indicative of brain injury using easily obtainable data such as spontaneous speech patterns (Ditthapron et al., 2022), and improving the accuracy of brain lesion segmentation when using MRI (Zhang., 2021). Studies exploring the predictive value of AI showed a high level of precision and accuracy when estimating discharge scores from information available on admission (Say et al., 2022) and in estimating individual working memory function on the basis of baseline fMRI and demographic data alone , revealing the feasibility and promise for future use of this technology in neurorehabilitation. ...

Continuous TBI Monitoring From Spontaneous Speech Using Parametrized Sinc Filters and a Cascading GRU

IEEE Journal of Biomedical and Health Informatics

... Furthermore, ensemble techniques, as employed in research [32] and [33], amalgamate outputs from various models trained on limited datasets, thereby enhancing overall accuracy. Additionally, multi-task learning, investigated [34], involves training a singular model on multiple related tasks, which allows for diverse utilization of limited datasets. Moreover, the study also employed meta-learning [34], a process that facilitates efficient learning from a limited dataset by leveraging past experiences and adapting quickly to new tasks. ...

Learning from Limited Data for Speech-based Traumatic Brain Injury (TBI) Detection
  • Citing Conference Paper
  • December 2021

... At this point, there would need to be further investigation into the limits of the comparison technique when the participant is suffering from a long-term illness. Since there is significant research on the possibility of 'Biomarkers' within speech that may indicate the presence of certain diseases and illnesses (Ramanarayanan, Lammert, Rowe, Quatieri, & Green, 2022), this may, in turn, allow for further identification if there were any significant markers identified within a spectrographic approach to 'biomarking'. ...

Speech as a Biomarker: Opportunities, Interpretability, and Challenges