Aaron A.R. Tobian’s research while affiliated with Johns Hopkins University and other places

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Publications (475)


Association between HIV-1 Nef-mediated MHC-I downregulation and the maintenance of the replication-competent latent viral reservoir in individuals with virally suppressed HIV-1 in Uganda: an exploratory cohort study
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March 2025

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9 Reads

The Lancet Microbe

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Jessica L Prodger

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Jada Hackman

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Jimmy D Dikeakos

Breaking Barriers: Successful Outcomes of HCV D+/R- Transplants in HIV+ Recipients
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  • Full-text available

February 2025

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19 Reads

American Journal of Transplantation

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Serum IgG and nAb responses to SARS-CoV-2 ancestral and Omicron variants in KTRs in comparison to HCs. Total SARS-CoV-2 Spike (S)-specific IgG (A) and neutralizing antibody (nAb) (B) against the ancestral strain (red), Omicron BA.1 (green), and Omicron BA.5 (blue) variants measured in KTRs (n = 81) or HCs (n = 11) who were previously vaccinated with the initial two-dose mRNA vaccine series prior to dose 3 (pre-D3), 30 days post-dose 3 (30 days post-D3), and 90 days post-dose 3 (90 days post-D3). Total anti-S IgG (C) and nAb levels (D) at 30 days post-D3 and nAb levels at 90 days post-D3 (E) were compared between the ancestral strain, Omicron BA.1, and Omicron BA.5 variants. Total anti-S IgG (F) and nAb (G) levels against ancestral strain, Omicron BA.1, and Omicron BA.5 variants were compared between KTR and HCs at 30 days post-D3. Dotted lines indicate the limit of detection (LOD), which is −1.52 for the anti-S IgG ELISA assay (A, C, F) and 0.17 for the nAb assay (B, D, E, G). Open circles represent non-responders with negative serological responses that fall below the LOD value. Solid triangles represent patients with a confirmed SARS-CoV-2 infection during the course of the study. The mean ± 95% CI are shown in each panel. Significance is tested using one-way repeated measures ANOVA (A–E), and unpaired t-tests (F, G). *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001. Fold changes (X) are labeled below the significance lines. The number of positive samples out of the total number of samples tested is indicated in parentheses.
Serum IgG subclass profile to SARS-CoV-2 ancestral strain in KTRs. SARS-CoV-2 Spike (S)-specific IgG subclasses (IgG1-4): IgG1 (yellow), IgG2 (blue), IgG3 (green), and IgG4 (purple) against ancestral strain were measured in KTRs (n = 81) prior to dose 3 (pre-D3), 30 days post-dose 3 (30 days post-D3), and 90 days post-dose 3 (90 days post-D3) (A). Anti-S IgG subclasses antibody levels against SARS-CoV-2 ancestral strain were compared at 30 days post-D3 (B) and 90 days post-D3 (C) in KTRs with anti-S total IgG (red) as a reference on the left of both panels. A summary panel of anti-S IgG subclass-specific antibody levels against ancestral strain is shown and connected by lines to show the changes of serological responses in IgG subclasses from pre-D3, 30 days post-D3, to 90 days post-D3 (D). Comparison of anti-S IgG subclass-specific antibody levels against ancestral strain was made between KTRs and healthy controls (HCs) (n = 11) at 30 days post-D3 (E). Dotted lines indicate the limit of detection (LOD), which is −3.00 for the subclass-specific IgG ELISA assay. Open circles represent non-responders with negative serological responses that fall below the LOD value. olid triangles represent patients with a confirmed SARS-CoV-2 infection during the course of the study. The mean ± 95% CI are shown in each panel. Significance is tested using mixed-effects model (A), one-way repeated measures ANOVA (B, C), and unpaired t-test (E). *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001. Fold changes (X) are labeled below the significance lines. The number of positive samples out of the total number of samples tested is indicated in parentheses.
A third COVID-19 vaccine dose in kidney transplant recipients induces antibody response to vaccine and Omicron variants but shows limited Ig subclass switching

January 2025

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9 Reads

Microbiology Spectrum

Solid organ transplant recipients (SOTRs) suffer more frequent and more severe infections due to their compromised immune responses resulting from immunosuppressive treatments designed to prevent organ rejection. Pharmacological immunosuppression can adversely affect immune responses to vaccination. A cohort of kidney transplant recipients (KTRs) received their third dose of ancestral, monovalent COVID-19 vaccine in the context of a clinical trial and antibody responses to the vaccine strain, as well as two Omicron variants BA.1 and BA.5 were investigated and compared with healthy controls who also received a third dose of mRNA vaccine (HCs). Total IgG and live virus neutralizing antibody titers were reduced in KTRs compared with controls for all variants. KTRs displayed altered IgG subclass switching, with significantly lower IgG3 antibodies. Responses in KTRs were also very heterogeneous, with some individuals showing strong responses but a significant number showing no Omicron-specific neutralizing antibodies. Taken together, immune responses after COVID-19 vaccination in KTRs were not only lower than HCs but highly variable, indicating that simply increasing the number of vaccine doses alone may not be sufficient to provide greater protection in this population. These findings underscore the need for tailored vaccination strategies for immunosuppressed populations, such as KTRs. Alternative formulations and doses of COVID-19 vaccines should be considered for people with severely compromised immune systems, as more frequent vaccinations may not significantly improve the response, especially regarding neutralizing antibodies. IMPORTANCE This study addresses the challenges faced by kidney transplant recipients (KTRs) in mounting effective immune responses against COVID-19. By evaluating the antibody responses to a third dose of monovalent mRNA COVID-19 vaccine and its effectiveness against Omicron subvariants (BA.1 and BA.5), this study reveals significant reductions in both binding and neutralizing antibodies in KTRs compared with healthy controls. The research highlights altered IgG subclass switching and heterogeneous responses within the KTR population. Reduced recognition of variants, coupled with differences in IgG subclasses, decreases both the quality and quantity of protective antibodies after vaccination in KTRs. These findings underscore the need for tailored vaccination strategies for immunosuppressed populations, such as KTRs. Alternative formulations and doses of COVID-19 vaccines should be considered for people with severely compromised immune systems, as more frequent vaccinations may not significantly improve the response, especially regarding neutralizing antibodies.


Total IgA and IgG concentrations in distal urethral swabs. A Log10 concentrations of paired IgA and IgG from the urethra, with the median value shown in red. B The ratio of IgA to IgG concentrations within the cohort (both n = 45). Statistical analysis used the Wilcoxon test and one-sample Wilcoxon test against a hypothetical IgA to IgG ratio of 1
Microbe-binding IgA and IgG within distal urethral swabs. A Representative flow cytometry plots of IgA and IgG MFI responses to G. vaginalis and S. mitis. The figure legend on the right illustrates the sample dilutions, with red indicating the most concentrated dilution and green the least concentrated dilution. Histogram distribution of the log10 transformed IgA and IgG MFI responses at the highest dilution concentration to B G. vaginalis (n = 45) and C S. mitis (n = 41). A comparison of the D–E proportion of double negative (IgA − IgG −), single positive (IgA + IgG − , IgA − IgG +), and double positive (IgA + IgG +) bacterial populations. Correlation between F S. mitis-binding IgA AUC vs. G. vaginalis-binding IgA AUC and G S. mitis-binding IgG AUC vs. G. vaginalis-binding IgG AUC. Statistical analysis utilized the Wilcoxon test, Kruskal–Wallis test, and Spearman correlation
Associations between urethral IgA and IgG and the urethral microbiome. Comparison of total IgA and IgG concentrations, G. vaginalis-binding IgA and IgG, and S. mitis-binding IgA and IgG between participants with and without detectable levels of urethral A–FGardnerella and G–LStreptococcus. Correlations between total bacterial abundance with M total IgA concentration and N total IgG concentration. Statistical analysis utilized the Welch’s T-test, Mann–Whitney U test, and Spearman’s correlation
Prior penile-vaginal sex and urethral IgA and IgG. A Total IgA and B IgG concentrations, CG. vaginalis-binding IgA AUC, D and G. vaginalis-binding IgG AUC were compared between study participants who reported: no prior history of sex, prior history of sex with detectable urethral Gardnerella, and prior history of sex without detectable urethral Gardnerella. Correlations between time since last penile-vaginal sex with EGardnerella relative abundance among participants with detectable urethral Gardnerella, F total urethral bacterial abundance, G total IgA and H IgG concentration, IGardnerella-binding IgA AUC, and JGardnerella-binding IgG AUC. Only participants with a prior history of penile-vaginal sex were included in the correlations. The statistical analysis utilized the Kruskal–Wallis test, one-way ANOVAs, and Spearman’s correlation
Gardnerellavaginalis-binding IgA in the urethra of sexually experienced males

January 2025

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11 Reads

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1 Citation

Background Genital inflammation increases HIV susceptibility and is associated with the density of pro-inflammatory anaerobes in the vagina and coronal sulcus. The penile urethra is a critical site of HIV acquisition, although correlates of urethral HIV acquisition are largely unknown. While Streptococcus mitis is a consistent component of the urethral flora, the presence of Gardnerella vaginalis has been linked with prior penile-vaginal sex and urethral inflammation. Here, we use a flow cytometry-based bacterial assay to quantify urethral IgA and IgG that bind G. vaginalis and S. mitis in a cross-sectional cohort of 45 uncircumcised Ugandan men and to evaluate their association with the urethral microbiome and local soluble immune factors. Results Urethral antibodies binding both bacterial species were readily detectable, with G. vaginalis predominantly bound by IgA, and S. mitis equivalently by IgA and IgG. Gardnerella vaginalis-binding IgA was elevated in participants with detectable urethral Gardnerella, with the latter only present in participants who reported prior penile-vaginal sex. In contrast, detectable urethral S. mitis was not associated with sexual history or levels of S. mitis-binding IgA/IgG. The time from the last penile-vaginal sex was inversely correlated with the urethral concentrations of total IgA, G. vaginalis-binding IgA, and chemokines IL-8 and MIP-1β; these inflammatory chemokines were independently associated with higher total IgA concentration, but not with G. vaginalis-binding IgA. Conclusions This first description of microbe-binding antibodies in the penile urethra suggests that urethral colonization by Gardnerella after penile-vaginal sex specifically induces a G. vaginalis-binding IgA response. Prospective studies of the host-microbe relationship in the urethra may have implications for the development of vaccines against sexually-transmitted bacteria. EnGLria5fUgKACmpttUN3NVideo Abstract


218. Attenuated PreFusion F Antibody Response to RSV Vaccines in Solid Organ Transplant Recipients

January 2025

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2 Reads

Open Forum Infectious Diseases

Background RSV causes serious morbidity in solid organ transplant recipients (SOTRs). Novel RSV vaccines are highly protective in the general population, yet immunogenicity among SOTRs is unknown. Demographic and Transplant Characteristics of SOTRs Reporting RSV Vaccination Methods Within a national, prospective cohort study SOTRs submitted whole blood samples at baseline and 2, 4, and 12 weeks post receipt of RSV vaccination (RSVPreF3 [GSK, AREXVY™] or RSVpreF [Pfizer, ABRYSVO™]) between October 2023-March 2024. Plasma prefusion F IgG and IgM (preF Ab) was tested using the Meso Scale Discovery platform and compared between baseline and 4 weeks to assess fold-change (FC); the proportion achieving high-titer Ab (IgG ≥high-titer reference plasma [BEI Resources]) at 4 weeks was also assessed. Ab measures were compared between GSK and Pfizer vaccinees. Change in Prefusion F IgG Titers following RSV Vaccination in SOTRs Blue dots represent Pfizer vaccine recipients and pink dots represent GSK vaccine recipients. Individual titer trajectories are connected by grey lines. High-titer response is denoted by the upper red horizontal line, corresponding to high-titer pooled control plasma. Results Among 27 participants (median [IQR] age 65-73 years, 44% female, 59% GSK and 30% Pfizer vaccinees [11% unspecified]), median [IQR] preF IgG rose from 76,252 [59,116-185,845] to 424,618 [153,503-1,905,705] AU/mL by 4 weeks (median [IQR] FC 5.54 [2.06-13.26]). Overall, 67% demonstrated IgG FC ≥4 at 4 weeks (69% GSK vs 50% Pfizer vaccinees) and 52% demonstrated high-titer Ab at 4 week (62% GSK vs 25% Pfizer vaccinees); clinical and transplant factors were similar between response groups. By 12 weeks, 56% showed high-titer Ab (62% GSK vs 38% Pfizer vaccinees) (Figure). Response patterns varied, including greater IgM change from baseline to 4 weeks in GSK vaccinees (IgM FC ≥4: 31% GSK vs 25% Pfizer) and more pronounced IgG peak-and-wane in GSK vaccinees (median FC from 4 to 12 weeks 1.01 GSK vs 0.49 Pfizer). No participants reported RSV infection during follow up. Prefusion F IgG Titers pre and post RSV Vaccination in SOTRs, by Vaccine Type Blue dots represent Pfizer vaccine recipients and pink dots represent GSK vaccine recipients. High-titer response is denoted by the upper red horizontal line, corresponding to high-titer pooled control plasma. Open circles represent ≥ 4-fold change in titer at 4 weeks. Conclusion RSV preF Ab responses are highly variable and often attenuated in SOTRs following RSV vaccination; 44% did not show high-titer Ab at 4 weeks. Response level and pattern vary by vaccine platform (i.e., adjuvanted versus unadjuvanted), which may imply different risk periods post vaccination and potential role for additional vaccine doses to improve immunoprotection. Prefusion F IgM Titers pre and post RSV Vaccination in SOTRs, by Vaccine Type Blue dots represent Pfizer vaccine recipients and pink dots represent GSK vaccine recipients. Open circles represent ≥ 4-fold change in titer at 4 weeks. Disclosures Andrew H. Karaba, MD PhD, Hologic: Advisor/Consultant William Werbel, MD, AstraZeneca: Advisor/Consultant|AstraZeneca: Honoraria|IDSA: Advisor/Consultant|Novavax: Advisor/Consultant


SARS-CoV-2 IgG antibodies in COVID-19 convalescent plasma and conventional plasma units

January 2025

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10 Reads

Transfusion

Background The Association for the Advancement of Blood and Biotherapies guidelines recommend the use of high‐titer COVID‐19 convalescent plasma (CCP) for patients with SARS‐CoV‐2 at high risk of disease progression, including those who are immunocompromised. We hypothesized that conventional plasma units have comparable neutralizing antibody levels to CCP. Study Design and Methods Conventional plasma and CCP units were obtained from blood suppliers. Quantitatively measured antibodies to SARS‐CoV‐2 were assessed using the MesoScale Discovery multiplex electrochemiluminescence immunoassay. Binding antibody distributions were compared with Wilcoxon rank‐sum tests. SARS‐CoV‐2 neutralizing antibodies were analyzed using the GeneScript ELISA‐based neutralization assay. The proportion of conventional and CCP units with a percent signal inhibition of ≥80% (as defined by the United States Food and Drug Administration for CCP in 2021) and exact binomial confidence intervals (CIs) were calculated. Results Among 218 conventional plasma units and 74 CCP units collected between September 2023 and July 2024, the distribution of total antibody binding levels largely overlapped between conventional plasma and CCP, though statistically significant differences in median nucleocapsid and spike Omicron variant concentrations were observed. Median percent signal neutralization was 97.5% (range 3.4%–98.6%) among conventional plasma units and 97.7% (range 95.4%–98.6%) among CCP units. For conventional plasma, 95.0% (95% CI = 91.2%–97.5%) met the neutralization antibody threshold for high‐titer CCP. For CCP, 100% (95% CI = 95.1%–100.0%) met the neutralization threshold for high‐titer CCP. Conclusion Conventional plasma units demonstrate similar median antibody concentration to CCP units. In countries or regions where licensed CCP is unavailable and titers are unknown, transfusion of multiple conventional plasma units may be of clinical utility.






Citations (50)


... For instance, the influenza vaccine can generate a humoral response in transplant recipients, but with a lower level of protection, despite variable responses [35]. A less robust response has also been observed to the respiratory syncytial vaccinations in immunocompromised patients [36]. Therefore, the low response to vaccination is not unique to mRNA vaccines, although neither the response with mRNA vaccines nor the hybrid response, which, in our hands, seems to offer more robust responses, was evaluated in these studies. ...

Reference:

Immunosuppressive Therapy Modifies Anti-Spike IgG Subclasses Distribution After Four Doses of mRNA Vaccination in a Cohort of Kidney Transplant Recipients
Antibody Response to Respiratory Syncytial Virus Vaccination in Immunocompromised Persons
  • Citing Article
  • December 2024

JAMA The Journal of the American Medical Association

... The study demonstrated that the primary safety outcome À a composite of death, graft loss, serious adverse events, HIV breakthrough infection, persistent HIV treatment failure, or opportunistic infection À was non-inferior for transplants from HIV-positive donors compared to HIV-negative donors. However, recipients of kidneys from HIVpositive donors experienced a higher incidence of HIV breakthrough infections [54]. A registry study analyzed kidney transplant (KT) recipients with HIV, comparing two induction therapies: rabbit antithymocyte globulin (r-ATG) and human interleukin-2 receptor antagonist (IL-2RA). ...

Safety of Kidney Transplantation from Donors with HIV

The New-England Medical Review and Journal

... In a recently pre-published study from the US, where over 500,000 hospitalized COVID-19 patients were treated with CCP during the first year of the pandemic, the investigators estimated that the extensive use of CCP in hospitalized COVID-19 patients would have saved between 16,476 and 66,296 lives, while its extensive outpatient use would have prevented 1,136,880 hospitalizations and saved 215,195 lives [11]. ...

Estimates of actual and potential lives saved in the United States from the use of COVID-19 convalescent plasma

Proceedings of the National Academy of Sciences

... Blood donation plays a critical role in healthcare systems worldwide, as donated blood saves millions of lives every year. 2 However, the global demand for blood often exceeds supply, creating an ongoing challenge. 3 In 2017, global statistics indicated a demand of 304 million units of blood (each unit measuring 200 ml), while the available supply was only 272 million units, highlighting a considerable shortfall. ...

The global blood donation index: an imperfect measure of transfusion need
  • Citing Article
  • September 2024

The Lancet

... For this reason, people who are carrying infections in the latent phase may not be motivated to go for blood tests, since they are asymptomatic. As a result, about 1.6 million blood units are destroyed annually due to TTIs [6], which in turn reduces the overall blood supply to the healthcare facilities [2, 7,8]. ...

A Model for Estimating the Burden of Disease of Transfusion-Transmitted Infection

International Journal of Public Health

... Repeat volunteer donors are crucial for improving blood safety. 16,17 The high endemicity of sickle cell disease in Nigeria results in a substantial proportion of patients requiring chronic blood transfusion. [18][19][20] Appropriate blood donation infrastructure, education, and outreach are essential for reducing the incidence of transfusion-transmitted HIV, HCV, and malaria. ...

Ensuring a Safe and Sufficient Global Blood Supply
  • Citing Article
  • August 2024

The New-England Medical Review and Journal

... But why is it that the reconstituted immune system still fails to eradicate HIV? This is closely related to the immune characteristics of the latent HIV reservoir, mainly in the following three aspects: 1 ⃝ The latent viruses in the reservoir are predominantly in a dormant state, hardly expressing complete viral proteins, and the infected cells lack obvious immune markers [49,50]. The immune system mainly targets active viruses and has limited ability to recognize latent viruses. 2 ⃝ The HIV reservoir is mainly concentrated in cell populations that highly express immune checkpoint molecules such as PD-1, CTLA-4, TIGIT, LAG-3, TIM-3, and CD160, and these cell populations can escape immune surveillance [51][52][53]. ...

Spatial technologies to evaluate the HIV-1 reservoir and its microenvironment in the lymph node

... However, Johnston et al. reported a decline in XBB.1.5 neutralization capacity within three months after receiving a bivalent booster in solid organ transplant recipients, which was restored by a second booster dose [27]. ...

Rapid Wane and Recovery of XBB Sublineage Neutralization After Sequential Omicron-based Vaccination in Solid Organ Transplant Recipients
  • Citing Article
  • July 2024

Clinical Infectious Diseases

... In light of these challenges, applying the lessons learned from past outbreaks, such as the COVID-19 pandemic, is essential to enhance preparedness for future infectious disease threats. This preparation process entails enhancing surveillance mechanisms, refining data collection processes, and improving reporting practices, in addition to fostering international collaboration to formulate effective response strategies [8]. Understanding the systemic factors that contribute to pandemics and addressing the root causes of disease emergence would aid in enhancing public health protection and preventing future global health crises. ...

Applying lessons of COVID-19 and other emerging infectious diseases to future outbreaks

... They discovered that out of 710 HIV D + referrals, 24% had organs procured. Most commonly, medical reasons were listed as reasons for nonprocurement including organs from people with AIDS-defining infections (36%), and non-HIV related medical reasons consisted of organ failure (36%), high neurologic function (where the donor has high neurological function and is not expected to arrest in time) (31%), and cancer (14%) [70]. In 26% of cases, nonprocurement was due to nonmedical reasons such as no authorization (42%), no waitlist candidates (21%), or no transplant center interest (20%) [70]. ...

Deceased Donors With HIV in the Era of the HOPE Act: Referrals and Procurement

Transplantation Direct