A.V. Kharlamova’s research while affiliated with Institute of Cytology and Genetics, Russian Academy of Sciences and other places

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Publications (48)


Does Long-Term Selection for Reactions to Humans Affect Decision-Making during Learning in Foxes?
  • Article

December 2024

Neuroscience and Behavioral Physiology

I. A. Mukhamedshina

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A. V. Kharlamova

Does the selection of fox for their reactions to humans affect the decision-making during learning?

October 2024

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2 Reads

Журнал высшей нервной деятельности им И П Павлова

In foxes selectively bred by ICG SB RAS for domestication or aggressive behavior toward humans, the behavior was analyzed. We have used the foxes not selected for behavior features as a control. Control foxes also were bred on experimental farm of ICG SB RAS. The peculiarities of explorative activities of foxes toward new objects, introduced inside the domestic cage, as well as behavioral features during attenuation of focused attention on the object of food reinforcement are discussed in the paper. Domesticated foxes demonstrated less neofobia during experiments then aggressive and unselected ones. On the other hand, the explorative behavior of tame foxes was characterized by a greater variability of motor reactions compared to aggressive and unselected ones. In the test for attenuation of focused attention, tame foxes used a greater number of different actions compared to other studied groups. Fox cubs from the domesticated population, placed in a new environment for the first time, found various ways go through obstacles when following a person. Based on these results we discuss the peculiarities of the decision-making in foxes.


Fig. 1. The basal and stress-induced blood serum cortisol levels in tame, aggressive, and unselected foxes (n = 11 in each group). * p < 0.05, *** p < 0.001 in comparison with unselected foxes. # p < 0.05, ### p < 0.001 in comparison with aggressive foxes.
The expression profile of genes associated with behavior, stress, and adult neurogenesis along the hippocampal dorsoventral axis in tame and aggressive foxes
  • Article
  • Full-text available

November 2023

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74 Reads

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1 Citation

Vavilov Journal of Genetics and Breeding

Yu. V. Alexandrovich

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E. V. Antonov

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S. G. Shikhevich

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[...]

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The hippocampus plays the key role in stress response regulation, and stress response appears to be weakened in domesticated animals compared to their wild relatives. The hippocampus is functionally heterogeneous along its dorsoventral axis, with its ventral compartment being more closely involved in stress regulation. An earlier series of experiments was conducted with a unique breeding model of animal domestication, the farm silver fox (Vulpes vulpes), which included tame, aggressive, and unselected animals. A decrease in many indices of the hypothalamic–pituitary–adrenal activity was observed in tame animals. Also, adult hippocampal neurogenesis was more intense in tame foxes, and this fact may relate to reduced stress levels in this experimental population of foxes. Nevertheless, the molecular mechanisms responsible for the reduced stress response in tame animals remain obscure. In this study, serum cortisol levels and the mRNA levels of 13 genes in the dorsal and ventral hippocampus have been measured and compared in tame, aggressive, and unselected foxes. At the current stage of domestication, stress-induced cortisol levels in tame, aggressive, and unselected animals differ significantly from each other: tame foxes show the lowest levels, and aggressive ones, the highest. Twelve genes tested demonstrate significant gene expression differences between the dorsal and ventral hippocampi. These differences are mainly consistent with those found in rodents and humans. In tame foxes, significantly elevated mRNA levels were recorded for several genes: CYP26B1 for cytochrome P450 26B1 and ADRA1A for α 1A adrenergic receptor in the dorsal hippocampus, whereas the level of NR3C2 mRNA for mineralocorticoid receptor was higher in the ventral. It is presumed that these genes constitute an important part of the mechanism reducing stress induced by contacts with humans and contribute to linking stress regulation with adult neurogenesis in tame foxes and domesticated animals in general.

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Putative Locus for Cranial Size Variability of the Fox (Vulpes vulpes)

May 2023

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19 Reads

Генетика

Skull morphology was studied in three populations of red foxes (Vulpes vulpes): tame, which was produced by long-term selection for friendly behavior to humans; aggressive, which was produced by long-term selection for aggressive behavior to humans; and conventional farm-bred, which was not deliberately selected for behavior. We have collected skulls measurements from two sets of foxes: (1) 140 backcross foxes produced by breeding of tame and aggressive foxes to each other and then crossing F1 foxes to tame strain, and (2) 150 foxes from original populations (50 tame, 50 aggressive and 50 conventional farm-bred). The backcross foxes have been genotyped with 350 microsatellite markers and analyzed using 2B-PLS analysis. A significant correlation between microsatellite genotypes and skull shape was identified for three microsatellite markers on 10-th fox chromosome: FH2535, RVC1, REN193M22. The second set of foxes (tame, aggressive and conventional) was genotyped for these three markers and also analysed with 2B_PLS. Significant correlation was identified between genotypes and skull size for males, but not for females. The genomic region identified in this study contains IGF-1 gene, which is responsible for 15% of body size variation in dogs. Our findings suggest that IGF-1 gene is also involved in skull size regulation in red foxes.


The Fox Domestication Experiment and Dog Evolution: A View Based on Modern Molecular, Genetic, and Archaeological Data

July 2021

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265 Reads

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7 Citations

Russian Journal of Genetics

Full-text: https://rdcu.be/cpN2R Animal and plant domestication is one of the most remarkable cultural achievements in human evolution. The first animal to have been domesticated was the dog. Although related studies are many, little is known about the earliest times of its domestication. This review emphasizes that there are parallels in behavior change and its molecular genetic basis between domesticated foxes and dogs, with a special focus on the so-called “ancient” breeds. Three approaches to the study of the molecular genetic mechanisms of domestication are described and some of their results obtained with modern methods, including highthroughput sequencing, are given. One involves the experimental modeling of early domestication stages in the fox, a farmed animal; another, a comparative analysis of modern dogs and wolves; and yet another, a paleogenetic analysis of ancient dogs and wolves, with an account of their archaeological context. Phylogenetic and phylogeographical approaches to the study of dog domestication and their role in a comprehensive reconstruction of domestication mechanisms are discussed. Difficulties with timing estimates, the geographic position and the reconstruction of molecular mechanisms for dog domestication are considered in the context of sampling strategies for genomic analysis. Genes encoding the signaling system of glutamate receptors and neural crest cells, with their broad pleiotropic effect, are discussed as being the most important targets of selection in experimental and historical domestication. In conclusion, the need of supplementing the studies of domestication mechanisms with analyses of various developmental stages at the molecular and organismal levels is highlighted.


Effects of experimental domestication of silver foxes (Vulpes vulpes) on vocal behaviour

August 2017

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230 Reads

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2 Citations

Vavilov Journal of Genetics and Breeding

This paper systematizes and generalizes a research cycle devoted to studying the acoustics and vocal behaviour of silver foxes that differ in their tolerance to humans. The research revealed that 50-year selection for tameness toward people resulted in selective use by Tame foxes toward humans of two call types, pant and cackle. At the same time, the selected for aggression toward people Aggressive foxes and the non-selected for behaviour Control foxes, selectively use toward humans cough and snort. Thus, call types representing vocal indicators of friendly and aggressive behaviour of foxes toward humans have been revealed by the research. Nevertheless, experimental domestication did not change vocal behaviour of foxes toward conspecifics; all three strains did not differ by their vocal behaviour toward same-strain silver foxes. Relationship has been investigated between vocal behaviour and degree of tolerance toward people for hybrids between Tame and Aggressive foxes and for backcrosses to Tame and Aggressive foxes. Effect was estimated between fox sex and the degree of human impact on focal fox for variables of fox vocal behaviour. The research revealed the universal for mammals vocal indicators of emotional arousal that are independent of the emotional valence. Characteristics of vocal behaviour that are related with positive and negative emotional valence have been revealed. A simple and effective method for estimating animal discomfort based on "joint calls" that takes into account the characteristics of all calls irrespective of their acoustic structure has been revealed. The obtained results provide a basis for further comparative studies of the acoustic structure and vocal behaviour for other taxa of the genus Vulpes and the related canid genera (Canis, Cuon, Lycaon).


Fig. 1. A fox with a low aggressiveness score. Photo by I. Pivovarova. 
Fig. 2. A fox with a very high aggressiveness score. Photo by Vincent J. Musi. 
table 2 . Variation of mean fox aggressiveness scores with selection
table 5 . Aggressiveness score variance in successive generations
On selection of foxes for enhanced aggressiveness and its correlated implications

July 2017

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184 Reads

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8 Citations

Vavilov Journal of Genetics and Breeding

The results of a 35-year selection of foxes for aggressive response to humans are reported. Averaged estimates of the phenotypic manifestation of aggressiveness in all selection generations are presented. The dynamics of these estimates shows that the phenotypic response to the selection was obvious only in the first 12 generations. Subsequent selection did not alter the mean aggressiveness score. Analysis of variance was performed for the intergroup variability (among descendants of different mothers) and intragroup variability (among the offspring within a family). The intragroup variability was constantly low. Most likely, the trait is stabilized by maternal prenatal and early neonatal factors. The general tendency in the dynamics of intergroup variability is that it does not decrease over time during selection, no matter how long the population has been under it. It follows from the statistical indices of the phenotypic similarity between parents and offspring that additive interactions are insufficient for the explanation of the persisting variability. The contribution of epistatic interactions is not ruled out, though. Emphasis is laid on the correlated consequences of the selection for aggressiveness and their coordination with the consequences of the selection in the opposite direction, for elimination of aggressive response to humans, or for tameness. The parallelism of correlated changes in the selection in contrasting directions is illustrated by the examples of some physiological and morphological traits. The phenomenon is discussed in the light of classical notions of the resource of cryptic genetic variation and the role of selection in its phenotypic manifestation. Its interpretation also invokes molecular data pointing that some genetic pathways may regulate parameters of both aggression and tameness and that the selection processes in both directions may have some genetic targets in common.


Does the Selection of Fox for Tame and Aggressive Behavior Changes their Ability to Focus Attention, and Training the Motor Skills?

February 2015

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24 Reads

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2 Citations

Журнал высшей нервной деятельности им И П Павлова

Foxes long time selected for tame and aggressive behavior were compared on ability to focus attention on the object of food reinforcement. Attenuation of this behavior and rate of training for motor skills also has been examined. Maximal duration of eye focusing was significantly higher in aggressive foxes, in comparison with tame ones. Our experiments allowed divide the group of tame foxes into two subgroups "calm" and "emotional", on the base of emotionality and motor activity during tests. Features of behavior of these two subgroups steadily differed in all tests. "Calm" tame foxes at the extinction test continued the trained skill longer than "emotional" and aggressive ones. Tame foxes were more successful than aggressive in the training for motor skills. The possible reasons of the data obtained are discussed.


Platinum coat color in red fox ( Vulpes vulpes ) is caused by a mutation in an autosomal copy of KIT

February 2015

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718 Reads

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20 Citations

The red fox (Vulpes vulpes) demonstrates a variety of coat colors including platinum, a common phenotype maintained in farm-bred fox populations. Foxes heterozygous for the platinum allele have a light silver coat and extensive white spotting, whereas homozygosity is embryonic lethal. Two KIT transcripts were identified in skin cDNA from platinum foxes. The long transcript was identical to the KIT transcript of silver foxes, whereas the short transcript, which lacks exon 17, was specific to platinum. The KIT gene has several copies in the fox genome: an autosomal copy on chromosome 2 and additional copies on the B chromosomes. To identify the platinum-specific KIT sequence, the genomes of one platinum and one silver fox were sequenced. A single nucleotide polymorphism (SNP) was identified at the first nucleotide of KIT intron 17 in the platinum fox. In platinum foxes, the A allele of the SNP disrupts the donor splice site and causes exon 17, which is part of a segment that encodes a conserved tyrosine kinase domain, to be skipped. Complete cosegregation of the A allele with the platinum phenotype was confirmed by linkage mapping (LOD 25.59). All genotyped farm-bred platinum foxes from Russia and the US were heterozygous for the SNP (A/G), whereas foxes with different coat colors were homozygous for the G allele. Identification of the platinum mutation suggests that other fox white-spotting phenotypes, which are allelic to platinum, would also be caused by mutations in the KIT gene. © 2015 Stichting International Foundation for Animal Genetics.


Citations (28)


... Farmed silver fox (Vulpes vulpes) and gray rat (Rattus norvegicus) are common experimental domestication models (Belyaev, 1979;Plyusnina and Oskina, 1997). Studies have demonstrated significantly higher stress-induced levels of adrenocorticotrophic hormone which stimulates the release of glucocorticoids by the adrenals, and cortisol in aggressive versus tame silver foxes (Oskina et al., 2008;Ovchinnikov et al., 2018;Alexandrovich et al., 2023). Aggressive rats of the 65th generation of selection had larger adrenal glands and higher levels of serum corticosterone in comparison with tame ones (Albert et al., 2008). ...

Reference:

The α-Tocopherol Status in American Mink (Neogale vison) Selected for Behavior
The expression profile of genes associated with behavior, stress, and adult neurogenesis along the hippocampal dorsoventral axis in tame and aggressive foxes

Vavilov Journal of Genetics and Breeding

... They occupy a wide variety of ecosystems, including deserts, grasslands, forests and agricultural and human-dominated environments (Statham et al., 2014). Two Vulpes species were domesticated 270 years ago in Canada: the blue fox, a variant of the arctic fox, and the silver fox, a variant of the red fox (Trut, 1999(Trut, , 2001. Foxes are important fur species that are widely raised around the world, and the fox fur trade has become one of the three pillar industries of the world fur industry (Zhou, 1987). ...

Experimental studies of early canid domestication.
  • Citing Chapter
  • March 2012

... In particular, the strain of tame individuals demonstrated the increased skull height at the level of the frontal bone (pug-likeness) and some violations in the teeth structure. Similar characters are also typical for a number of dog breeds (Drake & Klingenberg, 2010) and experimental strains of silver-black foxes (Trut et al., 2021). ...

The Fox Domestication Experiment and Dog Evolution: A View Based on Modern Molecular, Genetic, and Archaeological Data
  • Citing Article
  • July 2021

Russian Journal of Genetics

... Whichever hypothesis proves correct, the differences between wild versus domesticated mice is consistent with other evidence that USVs in pups and adults are influenced by genetics (Bell et al. 1972; Sales 1979; Maggio and Whitney 1986; Scattoni et al. 2008; Kikusui et al. 2011). Interestingly, the vocal repertoire of domesticated silver foxes (Vulpes vulpes) differs from vocalizations of their wild counterparts (Gogoleva et al. 2008aGogoleva et al. , 2008bGogoleva et al. , 2009). Frequency step USVs of wild male mice are composed of 2 elements with one frequency jump or 3 elements with two frequency jumps. ...

The sustainable effect of selection for behaviour on vocalization in the silver fox

... To rule this out, it will be necessary to more systematically examine whether domestication syndrome traits and neural crest involvement are present in instances of rapid evolved changes other than domestication. Intriguingly, Russian farmed foxes from the aggressive strain show also show enlarged brains relative to farm-raised controls [19], as well as some other domestication syndrome traits [92]. ...

On selection of foxes for enhanced aggressiveness and its correlated implications

Vavilov Journal of Genetics and Breeding

... Evc"l köpeğ"n günümüzden yüz b"n yıl önce "nsanoğlu tarafından gr" kurt (Can•s lupus) türünden evc"lleşt"r"ld"ğ" düşünülmekted"r ve evc"l köpeğ"n evc"l b"r hayvan türü olarak yaygınlaşması ve farklı ırkların ortaya çıkmasının günümüzden on beş b"n yıl önce gerçekleşt"ğ" kabul ed"lmekted"r (2,(4)(5)(6). Evc"l köpeğ"n köken aldığı gr" kurdun bugün varlığını sürdüren gr" kurt türünden farklı olduğu yönünde görüşler vardır (6,7). Güncel çalışmalar, evc"l köpeğ"n geçm"ş"n"n kabul ed"lenden daha esk" olab"leceğ"n" ve "lk evc"lleşt"rmen"n günümüzden otuz b"n yıl önce Afr"ka' da gerçekleşm"ş olab"leceğ"n" Basenj" ırkı köpekler üzer"nde gösterm"şt"r (8). ...

Experimental studies of early canid domestication
  • Citing Article
  • March 2012

... B 290: 20222464 researchers repeatedly inserted a gloved hand into animal cages and recorded levels of fear and aggression displayed. Three distinct populations of foxes-designated as 'tame', 'aggressive' and 'control' lineages-were developed based on their observed behavioural responses [18,40,41]. Within a few generations, the tamest foxes were reported to seek human contact without fear, but had also acquired multiple unselected features typical of traditional domesticates, including relatively shortened jaws, drooping ears, piebald pigmentation, reduced stress physiology and altered reproductive timing [18,40,42]. ...

Morphology and behavior: are they coupled at the genome level?
  • Citing Article
  • January 2006

... 159 Similar changes in HPA-axis function, such as reduced cortisol levels, were also found in mink bred for domesticated behaviour. 160 A number of tests have been developed to test the responses of mink to potentially stressful situations. The 'stick test' has been used to categorise mink as 'fearful' , 'exploratory/confident' or 'aggressive' , depending on their response to a wooden spatula inserted into the cage. ...

The cortisol and transcortin blood levels in the mink Mustela vision selected for behavior after a long-term maintenance in pairs
  • Citing Article
  • September 2000

Journal of Evolutionary Biochemistry and Physiology

... The homozygous lethal effect, predominantly at the preimplantation stage of embryo development, was also reported for Shadow mink (Nes, 1963(Nes, , 1964 and it seems to be the result of the pleiotropic role of the KIT gene in the development of multiple cell types (Alexeev & Yoon, 2006;Roberts & Govender, 2015;Roskoski, 2005). Also the complete loss of exon 17 (p.Asn783_Gly823del) owing to splicing sites mutations was reported among Sabino horses (Brooks & Bailey, 2005) and Platinum foxes (Johnson et al., 2015), the phenotype of the latter being highly similar to the Shadow (S h /+) fur colour in mink. ...

Platinum coat color in red fox ( Vulpes vulpes ) is caused by a mutation in an autosomal copy of KIT
  • Citing Article
  • February 2015

... The existence of parallel traits in the two species are what Vavilov (1922) called "homologous series" in variation, shared genetic components in otherwise different genetic backgrounds. The linked transformations in these traits is an example of pleiotropy (Trut et al., 2013), the effect of one or a few genes on several disparate traits, and this particular set of connections extends so deeply in mammal phylogeny that parallel changes observed in other domestic species have been referred to as the "domestication syndrome" (Wilkins et al., 2014;Sánchez-Villagra et al., 2016). Pleiotropy and homologous series, along with other kinds of genetic and developmental factors, provide the biological underpinnings for what is sometimes called the phenotypic landscape, which describes the complex and frequently non-linear relationship between phenotypes and their underlying biological and environmental factors. ...

Fox domestication: Molecular mechanisms involved in selection for behavior
  • Citing Article
  • November 2013

Russian Journal of Genetics: Applied Research