Article

Identification of a Human Endonuclease Complex Reveals a Link between tRNA Splicing and Pre-mRNA 3′ End Formation

PTC Therapeutics, 100 Corporate Court, South Plainfield, NJ 07080, USA.
Cell (Impact Factor: 32.24). 05/2004; 117(3):311-21. DOI: 10.1016/S0092-8674(04)00342-3
Source: PubMed

ABSTRACT

tRNA splicing is a fundamental process required for cell growth and division. The first step in tRNA splicing is the removal of introns catalyzed in yeast by the tRNA splicing endonuclease. The enzyme responsible for intron removal in mammalian cells is unknown. We present the identification and characterization of the human tRNA splicing endonuclease. This enzyme consists of HsSen2, HsSen34, HsSen15, and HsSen54, homologs of the yeast tRNA endonuclease subunits. Additionally, we identified an alternatively spliced isoform of SEN2 that is part of a complex with unique RNA endonuclease activity. Surprisingly, both human endonuclease complexes are associated with pre-mRNA 3' end processing factors. Furthermore, siRNA-mediated depletion of SEN2 exhibited defects in maturation of both pre-tRNA and pre-mRNA. These findings demonstrate a link between pre-tRNA splicing and pre-mRNA 3' end formation, suggesting that the endonuclease subunits function in multiple RNA-processing events.

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    • "During their nuclear biogenesis, pre-tRNAs undergo various maturation steps including cleavage of the 5′ leader sequence by RNase P, RNase Z-dependent 3′ end processing, 3′ CCA addition and introduction of a myriad of nucleotide modifications (reviewed in Ref. [24]). Interestingly, in yeast, splicing of intron-containing tRNAs takes place on the mitochondrial outer surface [25] [26], whereas in mammalian cells, the tRNA splicing machinery is located within the nucleus [27] and intron removal takes place prior to export through the NPC. The major export receptor for tRNAs, which is specific for this class of RNAs, is Los1 in yeast (EXP-t/ XpoT in mammals) [28] [29] [30] and translocation follows the general paradigm for Ran-dependent transport (Fig. 2a). "
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    • "ELAC2 was suggested to be involved in nuclear and mitochondrial tRNA 3 ′ end processing in vivo, whereas the cellular role of ELAC1 remains unclear (Rossmanith 2011). A subset of pre-tRNAs contains introns that are removed during nuclear tRNA splicing reactions in mammals (Paushkin et al. 2004). Prior to export to the cytoplasm, the nucleotidyltransferase Trnt1 adds a nontemplated CCA trinucleotide to the 3 ′ end of the tRNA that acts as a prerequisite for aminoacylation (Reichert et al. 2001). "
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    • "There is appreciable conservation among these eukaryotic Sen2 and Sen34 subunits, and archaeal endonucleases, indicating the same evolutional origin of splicing machinery. The human Sen complex also contains Clp1 (hClp1) (Paushkin et al., 2004; Weitzer and Martinez, 2007). Clp1 was first identified as a component of the cleavage factor II for polyadenylation of pre-mRNAs (de Vries et al., 2000), and then re-identified as an in vitro kinase for tRNA exons when searching for an enzyme phosphorylating siRNAs displaying a 5′-OH group (Figure 4) (Weitzer and Martinez, 2007). "
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