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Electronic Health Records and Research: Privacy Versus Scientific Priorities

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... The heterogeneity and networking of big data and global moves towards Bopen data^blur conceptual distinctions such as those between health-related data and non-health-related data, between personal and nonpersonal data, between individual and group-level privacy, and between Bprimary^and Bsecondary^uses of data-distinctions that often form the basis of existing confidentiality (and consent) rules (e.g. Terry 2013;Hoffman 2010Hoffman , 2014Hoffman , 2016Schadt 2012;Frizzo-Barker et al. 2016;Erdmann 2013;Chow-White et al. 2015;Stoeklé et al. 2016;Shoenbill et al. 2014). Furthermore, big data analytics have reached a level of sophistication that makes it impossible to promise perfect anonymity, even if all identifiers are removed from a particular segment of data (e.g. ...
... The heterogeneity and networking of big data and global moves towards Bopen data^blur conceptual distinctions such as those between health-related data and non-health-related data, between personal and nonpersonal data, between individual and group-level privacy, and between Bprimary^and Bsecondary^uses of data-distinctions that often form the basis of existing confidentiality (and consent) rules (e.g. Terry 2013;Hoffman 2010Hoffman , 2014Hoffman , 2016Schadt 2012;Frizzo-Barker et al. 2016;Erdmann 2013;Chow-White et al. 2015;Stoeklé et al. 2016;Shoenbill et al. 2014). Furthermore, big data analytics have reached a level of sophistication that makes it impossible to promise perfect anonymity, even if all identifiers are removed from a particular segment of data (e.g. ...
... The heterogeneity and networking of big data and global moves towards Bopen data^blur conceptual distinctions such as those between health-related data and non-health-related data, between personal and nonpersonal data, between individual and group-level privacy, and between Bprimary^and Bsecondary^uses of data-distinctions that often form the basis of existing confidentiality (and consent) rules (e.g. Terry 2013;Hoffman 2010Hoffman , 2014Hoffman , 2016Schadt 2012;Frizzo-Barker et al. 2016;Erdmann 2013;Chow-White et al. 2015;Stoeklé et al. 2016;Shoenbill et al. 2014). Furthermore, big data analytics have reached a level of sophistication that makes it impossible to promise perfect anonymity, even if all identifiers are removed from a particular segment of data (e.g. ...
Article
Biomedical innovation and translation are increasingly emphasizing research using “big data.” The hope is that big data methods will both speed up research and make its results more applicable to “real-world” patients and health services. While big data research has been embraced by scientists, politicians, industry, and the public, numerous ethical, organizational, and technical/methodological concerns have also been raised. With respect to technical and methodological concerns, there is a view that these will be resolved through sophisticated information technologies, predictive algorithms, and data analysis techniques. While such advances will likely go some way towards resolving technical and methodological issues, we believe that the epistemological issues raised by big data research have important ethical implications and raise questions about the very possibility of big data research achieving its goals.
... With the consolidation of EPR systems in modern healthcare, massive amounts of clinical data and phenotype data are gradually becoming available for researchers [1,2,3,4,5,6]. Alone, or integrated with existing biomedical resources, these EPR systems constitute a rich resource for many types of data driven knowledge discovery as we demonstrate in this paper. ...
... Alone, or integrated with existing biomedical resources, these EPR systems constitute a rich resource for many types of data driven knowledge discovery as we demonstrate in this paper. In the coming years, as these data are also coupled to the expected explosion in personal genomic data, the translational meeting of 'bench and bedside' is expected to push scientific advancements in personalized medicine [4,7,8,9,10]. EPR systems document patient morbidity, treatment and care over time. ...
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Author Summary Text mining and information extraction can be seen as the challenge of converting information hidden in text into manageable data. We have used text mining to automatically extract clinically relevant terms from 5543 psychiatric patient records and map these to disease codes in the International Classification of Disease ontology (ICD10). Mined codes were supplemented by existing coded data. For each patient we constructed a phenotypic profile of associated ICD10 codes. This allowed us to cluster patients together based on the similarity of their profiles. The result is a patient stratification based on more complete profiles than the primary diagnosis, which is typically used. Similarly we investigated comorbidities by looking for pairs of disease codes cooccuring in patients more often than expected. Our high ranking pairs were manually curated by a medical doctor who flagged 93 candidates as interesting. For a number of these we were able to find genes/proteins known to be associated with the diseases using the OMIM database. The disease-associated proteins allowed us to construct protein networks suspected to be involved in each of the phenotypes. Shared proteins between two associated diseases might provide insight to the disease comorbidity.
... Cross-border and interoperable electronic health-record systems make confidential data more easily and more rapidly accessible to a wider audience. However, by enabling greater access to a compilation of personal data concerning one's health and genetic information from different sources, and spanning a lifetime, they increase the risk that personal health data could accidentally be disclosed or distributed to unauthorised parties (Hoffman 2010). There is broad agreement that it is individuals who should not only control their own data but also have the right to make decisions about access to their data, and be informed about how they will be used (Kaye et al. 2011;Brent D Mittelstadt et al. 2012;Solove 2013;Sterckx et al. 2015). ...
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Intensified and extensive data production and data storage are characteristics of contemporary western societies. Health data sharing is increasing with the growth of Information and Communication Technology (ICT) platforms devoted to the collection of personal health and genomic data. However, the sensitive and personal nature of health data poses ethical challenges when data is disclosed and shared even if for scientific research purposes. With this in mind, the Science and Values Working Group of the COST Action CHIP ME ‘Citizen's Health through public-private Initiatives: Public health, Market and Ethical perspectives’ (IS 1303) identified six core values they considered to be essential for the ethical sharing of health data using ICT platforms. We believe that using this ethical framework will promote respectful scientific practices in order to maintain individuals’ trust in research. We use these values to analyse five ICT platforms and explore how emerging data sharing platforms are reconfiguring the data sharing experience from a range of perspectives. We discuss which types of values, rights and responsibilities they entail and enshrine within their philosophy or outlook on what it means to share personal health information. Through this discussion we address issues of the design and the development process of personal health data and patient-oriented infrastructures, as well as new forms of technologically-mediated empowerment.
... The exponential growth, in recent times, of the amount of biomedical information that is stored on purely electronic supports-Electronic Health Records, or EHR, spring promptly to our mind-has turned them into an element of undeniable relevance to the most diverse fields of scientific research ( Hoffman, 2010;Prokosch, & Ganslandt, 2009). One of these fields is that of Information Retrieval, and its traditional challenge of identifying those records which most efficiently answer a user's immediate needs for information; for this task to be accomplished, it is critical to first establish a recognition of patterns in medical histories which would permit, ultimately, the early detection of epidemic outbreaks, the prevention of disease, or the identification of cohort groups ( Roque, et al., 2011). ...
... This immediately undermines the privacy of the information, raising important confidentiality concerns for database managers and users. Because such annotation and cross-linking is crucial to the epidemiological and diagnostic utility of clinical data sets, an internal tension is created between enabling data mining to promote science or discouraging it in order to protect privacy [19]. ...
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The advent and expansion of electronic medical record systems and open-access databases are creating a "data tsunami." As this wave descends, we must anticipate and address several ethical and social risks: threats to patient privacy, threats to the reputations of various social groups, and threats to public trust in biomedical research.
... The danger is that large segments of the population or subgroups of individuals . . . will decide to opt out of inclusion in databases " (Hoffman 2010 ). Prudent consent documents will avoid language that might unnecessarily encourage widespread opposition to participation. ...
... He suggests several ways of increasing individual control, including measures to reallocate a portion of revenue flowing from the research. Misha Angrist (2010) and Sharona Hoffman (2010) both give voice to an ambivalence I suspect is widespread among experts in research ethics who have considered this issue. For Angrist, " deidentification is already an inadequate compromise designed to retain a modicum of respect for subject privacy while relieving investigators of the ajob W1 ...
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My recent American Journal of Bioethics target article, “Is Deidentification Sufficient to Protect Health Privacy in Research?” (Rothstein 2010), generated 13 open peer commentaries (OPCs). Twelve generally agree with my basic premise that it is ethically problematic for researchers to deidentify and use health information and biological specimens without the knowledge, consent, or authorization of the individual source of the information or sample. These 12 OPCs provide valuable insights, critiques, and suggestions about issues in the target article. I want to begin this response, however, by considering the one OPC highly critical of my assertion of the need to alter the status quo.
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