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Mass mortality associated with a frog virus 3-like Ranavirus infection in farmed tadpoles Rana catesbeiana from Brazil

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Ranaviruses (Iridoviridae) are increasingly associated with mortality events in amphibians, fish, and reptiles. They have been recently associated with mass mortality events in Brazilian farmed tadpoles of the American bullfrog Rana catesbeiana Shaw, 1802. The objectives of the present study were to further characterize the virus isolated from sick R. catesbeiana tadpoles and confirm the etiology in these outbreaks. Sick tadpoles were collected in 3 farms located in Goiás State, Brazil, from 2003 to 2005 and processed for virus isolation and characterization, microbiology, histopathology, and parasitology. The phylogenetic relationships of Rana catesbeiana ranavirus (RCV-BR) with other genus members was investigated by PCR with primers specific for the major capsid protein gene (MCP) and the RNA polymerase DNA-dependent gene (Pol II). Sequence analysis and multiple alignments for MCP products showed >99% amino acid identity with other ranaviruses, while Pol II products showed 100% identity. Further diagnostics of the pathology including histology and transmission electron microscopy confirmed the viral etiology of these mass deaths. As far as we know, this is the first report of a ranaviral infection affecting aquatic organisms in Brazil. Additionally, our results suggest that American bullfrogs may have served as a vector of transmission of this virus, which highlights the potential threat of amphibian translocation in the world distribution of pathogens.
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Mass mortality associated with a frog virus 3-like Ranavirus
infection in farmed tadpoles Rana catesbeiana from Brazil
Rolando Mazzoni
1,*
, Albenones José de Mesquita
2
, Luiz Fernando F. Fleury
3
, Wilia Marta
Elsner Diederichsen de Brito
4
, Iolanda A. Nunes
2
, Jacques Robert
5
, Heidi Morales
5
,
Alexandre Siqueira Guedes Coelho
6
, Denise Leão Barthasson
4
, Leonardo Galli
1
, and Marcia
H. B. Catroxo
7
1
Instituto de Investigaciones Pesqueras, Facultad de Veterinaria, Universidad de la República,
Tomás Basañez 1160, Montevideo 11300, Uruguay
2
Centro de Pesquisa em Alimentos, Escola de Veterinária, Universidade Federal de Goiás, Campus
Samambaia (Campus II), Caixa postal 131, CEP 74001-970, Goiânia-GO, Brazil
3
Departmento de Patologia e Imaginologia, Faculdade de Medicina, Universidade Federal de
Goiás, l
a
Avenida s/n, Setor Universitário 74605-050, Goiânia-GO, Brazil
4
Laboratório de Virologia Animal, Setor Microbiologia, Instituto de Patologia Tropical e Saude
Pública, Universidade Federal de Goiás, Rua 235 s/n, Setor Universitário 74605-050, Goiânia-GO,
Brazil
5
Department of Microbiology and Immunology, University of Rochester Medical Center, 601
Elmwood Avenue, Rochester, New York 14642, USA
6
Escola de Agronomia e Enqenharia de Alimentos, Universidade Federal de Goiás, Campus
Samambaia, CEP 74001–970, Goiânia-Go, Brazil
7
Laboratório de Microscopia Eletrônica, Centro de Pesquisa e Desenvolvimento de Sanidade
Animal, Instituto Biológico, Av. Cons. Rodrigues Alves 1252, CEP 04014-002. São Paulo-SP, Brazil
Abstract
Ranviruses (Iridoviridae) are increasingly associated with mortality events in amphibians, fish, and
reptiles. They have been recently associated with mass mortality events in Brazilian farmed tadpoles
of the American bullfrog Rana catesbeiana Shaw. 1802. The objectives of the present study were to
further characterize the virus isolated from sick R. catesbeiana tadpoles and confirm the etiology in
these outbreaks. Sick tadpoles were collected in 3 farms located in Goiás State, Brazil, from 2003 to
2005 and processed for virus isolation and characterization, microbiology, histopathology, and
parasitology. The phylogenetic relationships of Rana catesbeiana ranavirus (RCV-BR) with other
genus members was investigated by PCR with primers specific for the major capsid protein gene
(MCP) and the RNA polymerase DNA-dependent gene (Pol II). Sequence analysis and multiple
alignments for MCP products showed >99% amino acid identity with other ranaviruses, while Pol
II products showed 100% identity. Further diagnostics of the pathology including histology and
transmission electron microscopy confirmed the viral etiology of these mass deaths. As for as we
know, this is the first report of a ranaviral infection affecting aquatic organisms in Brazil.
Additionally, our results suggest that American bullfrogs may have served as a vector of transmission
of this virus, which highlights the potential threat of amphibian translocation in the world distribution
of pathogens.
*
rolo@pes.fvet.edu.uy.
NIH Public Access
Author Manuscript
Dis Aquat Organ. Author manuscript; available in PMC 2010 July 9.
Published in final edited form as:
Dis Aquat Organ. 2009 November 9; 86(3): 181–191.
NIH-PA Author Manuscript NIH-PA Author Manuscript NIH-PA Author Manuscript
Keywords
Iridovirus; FV3; Ranavirus; Rana catesbeiana
INTRODUCTION
Brazilian frog farming is a flourishing industry that mainly focuses on producing the American
bullfrog Rana catesbiana Shaw, 1802. Ranaculture has been recently plagued by mass
mortality events. These acute outbreaks were identified as a severe condition in tadpoles at
early developmental stages and resulted in significant economic loses (Galli et al. 2006,
Mazzoni 2006). The clinical signs of disease were apparently non-specific and common to
several disorders. Nutritional, toxic, or management causes, associated or not with various
genera and species of bacteria, have been suspected as possible etiologies (Hipólito & Bach
2002). However, viruses of the family Iridoviridae, genus Ranavirus have been increasingly
signaled as possible etiological agents in both wild and cultured aquatic organisms (Williams
et al. 2005).
Ranaviruses belong to the family Iridoviridae, which comprises 4 other genera:
Lymphocystisvirus, Chloriridovirus, Iridovirus, and Megalocytivirus. Viral size ranges from
120 to 300 nm in diameter with icosahedrical symmetry (Webby & Kalmarkoff 1998). The
genome is composed of a unique DNA double-stranded linear molecule with variable size
ranging from 102 to 212 kbp depending on the species. The virus particle is formed by 3
structures: the external protein capsid, a polypeptide-lipid intermediate membrane, and a
central nucleus containing a DNA-protein complex. The DNA is both circularly permuted and
terminally redundant (Goorha & Murti 1982), leading to a genome map that is circular while
the actual molecule is still linear (Houts el al. 1974) with >20% of its cytosine CpG sequences
methylated (Willis & Granoff 1980). All iridovirus family members express the major capsid
protein (MCP) of about 50 kDa, whose molecular properties have been extensively used for
viral characterization and identification (Webby & Kalmarkoff 1998, Chinchar et al. 2005,
Williams et al. 2005). Complete ranavirus MCP sequences are available from frog virus 3
(FV3) (Mao el al. 1996, Tan et al. 2004), tiger frog virus (He et al. 2002), Bohle iridovirus
(Marsh el al. 2002), epizootic hematopoietic necrosis virus (Marsh et al. 2002), Ambystoma
tigrinum virus (Jancovich et al. 2003), and Rana grylio virus (RGV 9506, RGV 9507, and RGV
9508; Zhang et al. 2006). Complete genome sequences from several members of the genus are
also available, including FV3, the type species of the family (Tan et al 2004). Diseases produced
by ranaviruses have been increasingly reported to affect 3 different taxonomic classes of cold-
blooded vertebrates: teleost fish, amphibians, and reptiles. They are considered to be emerging
pathogens that produce economic damage to commercially raised species and cause population
declines in the wild (Williams et al. 2005, Fox et al. 2006). Ranaviruses were reported to be
associated with mass mortality episodes affecting Rana grylio tadpoles (Zhang et al. 2001),
R. tigrina rugulosa tadpoles (Weng et al. 2002), and R. catesbeiana tadpoles in the USA
showing abdominal swelling (Majji et al. 2006).
Ranaviruses were suspected as etiological agents in mass mortalities affecting farmed tadpoles
Rana catesbeiana in Brazil (Galli et al. 2006). Galli el al. (2006) reported high sequence identity
with FV3 and other Ranavirus genus members for MCP and the immediately early protein
(IE-ICP18) gene products, raising the question about the source and origin of the Brazilian
virus isolate, given that bullfrog populations, signaled as endemic FV3 carriers (Wolf et al.
1968), were imported from North America in 1970 (Mathias & Scoll 2004), so a pathogen
translocation through the bullfrog trade is possible. However, ranaviruses have been identified
in almost all continents and previous reports in South America showed their presence in local
species (Zupanovic et al. 1998, Fox et al. 2006).
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The MCP gene has been used extensively to assess the phylogeny and taxonomy of iridoviruses.
Based on the MCP sequence, Mao et al. (1997) have shown that iridoviruses isolated from the
same geographic region were identical or highly similar; meanwhile those from different
regions were genetically more distant. Similar results were reported when 30 iridoviruses from
different geographic sites were analyzed (Hyatt et al. 2000). Examination of the entire MCP
sequence allowed the differentiation of Australian, European, and American ranavirus isolates
(Marsh el al. 2002) A phylogeographic study of ranaviruses from salamander Ambystoma
tigrinum in the USA was based a the comparison of 514 MCP nucleotides located at the 5 end
(Jancovich et al. 2005). Do et al. (2005) analyzed 13 iridoviruses isolated from fish in Korea
using the complete MCP sequences and showed that the viruses belong to the some species,
which is consistent with the introduction of a single infectious agent. The DNA polymerase of
many large DNA viruses has been also used to evaluate virus relationships (Hanson et al.
2006).
The goals of the present study were to isolate the virus from sick Rana catesbeiana tadpoles
and determine whether the virus had an etiological role in mass mortality episodes. To study
the phylogenetic relationships with FV3 and other Ranavirus members, we analyzed the
complete MCP coding region as well as partial sequences from the RNA polymerase DNA-
dependent polymerase II (Pol II).
MATERIALS AND METHODS
Tadpole samples
Five hundred sick tadpoles in Gosner Stage 25 (Gosner 1960) were collected from 3 farms
located in Goiás State, Brazil (Fig. 1) from 2003 to 2005, one-third being used for virus
isolation, one-third for PCR, and the rest being necropsied and used for bacteriology,
parasitology, and histopathology (Table 1). Continuous gravitational flow of surface water was
maintained in all ponds where tadpoles received 45% crude protein powder feed from different
sources. Samples were taken from tanks when acute mass mortality events were reported within
the first 24 h of onset. Records of anamnestic and epizootiological data were collected as well
as clinical evaluations of sick tadpoles. Dead animals were not sampled to avoid post-mortem
changes that might result in the wrong microbiological or histopathological conclusions.
Samples for virus isolation
Tadpoles were preserved in 95% ethanol when fixed at the farm or frozen at 20°C when
processed at the laboratory. For virus isolation, frozen tadpoles were macerated with the
addition of sterile amphibian phosphate-buffered saline (APBS, 6.6 g 1
1
NaCl, 1.15 g 1
1
Na
2
HPO
4
, and 0.2 g 1
1
KH
2
PO
4
; pH 7.5). The suspension was collected and distributed in 2
ml sterile tubes, freeze-thawed 3 times at 80°C, and followed by centrifugation at 1000 × g
for 10 min at 4°C. The supernatant containing virus was filtered with 0.45 μm Millipore filters,
and 1.0 ml aliquots were stored at 80°C until used or immediately inoculated in 80% confluent
Xenopus sp. kidney A6 cells (Rafferty 1969) in 25 cm
2
bottles. After a 45 min incubation, 5
ml culture medium was added (Dulbecco’s modified Eagle medium [DMEM; Gibco] with
addition of penicillin-streptomycin and amphotericin). Control bottles were inoculated wilh
1.0 ml APBS. Cells were incubated at 25 to 27°C in a dark chamber and examined twice daily
during 1 wk to verify the cytopathic effect.
PCR
DNA was obtained using the saline extraction method (Miller et al 1988). Briefly, whole
tadpoles were homogenized in a pestle and mortar in sterile conditions, and 50 mg samples
were diluted in 500 μl lysis buffer (50 mM Tris-HCl, pH 8.0; 50 mM EDTA, pH 8.0; 1 % SDS,
50 mM NaCl) and 50 μl lysozyme (10 mg ml
1
), then finger-vortexed and left overnight al 55°
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C. Tubes were centrifuged (Eppendort Microcentrifuge 5415 D) at 12000 × g for 15 min, and
400 μl supernatant was mixed with 240 μl 5 M NaCl, finger-vortexed for 15 s, and centrifuged
for 30 min at 12000 × g. The supernatant (450 μl) was transferred to a new tube, to which 400
μl 100% ethanol at 20°C was added, and mixed by gently inverting the tubes for 30 s. Tubes
were left for at least 2 h at 20°C or at 4°C overnight for DNA precipitation. For pelleting,
tubes were centrifuged at 12000 × g for 30 min, washed twice with 70% ethanol, centrifuged
at 5000 × g for 5 min, and dried at room temperature. DNA was resuspended in 100 μl TE
buffer (10 mM Tris-HCl, pH 8.0; 1 mM EDTA) at 55°C in a dry air chamber for 2 h.
IE-ICP 18 was used as the screening tool for primary detection. Positive samples were then
PCR-amplified using primers specific for MCP and Pol II genes (Table 2). Optimal melting
temperature for these primers was determined by a thermal-gradient PCR, testing from 50 to
65°C. For each reaction, the mixture used was 2.5 μl 10× PCR buffer (20 mM Tris-HCl. pH
8.4; 50 mM KCl). 200 μM dNTP, 2.5 mM MgCl
2
, 2.5 μM of each primer. 1 U of Taq DNA
polymerase, 5 μl of DNA template (100 ng μl
1
), and distilled water to complete 50 μl.
Amplification conditions were adapted for each set of primers according to the melting
temperature and length of the amplified fragment. Briefly, an initial cycle at 90°C for 1 min
was followed by 40 cycles at 94°C for 1 min, 60°C for 1 min, 72°C for 1 min, and a final
extension step at 72°C for 5 min. For complete MCP primers, the extension time was 90 s, and
for Pol II 30 s. Amplification products were run in 1 % agarose gel, immersed in TAE buffer
(40 mM Tris-acetate, 1 mM EDTA) stained with 0.5 μg ml
1
ethidium bromide and visualized
with UV transilluminator.
Sequencing and sequence analysis
The PCR fragments were sequenced using the Big Dye
®
Terminator (v. 3.1) kit in an ABI-3100
fragment analyzer (Applied Biosystems) following the manufacturer’s instructions. MCP
sequences were analyzed from both ends, combined with 4 internal primers to overlap partial
fragments and obtain the whole sequence (forward primers 5-CAC CAG CGA TCT CAT
CAA CC-3 and 5-CGC AGT CAA GGC CTT GAT CT-3 [Hyatt et al. 2000], and reverse
primers 5-GTC TCT GGA GAA GAA GAA-3 [MCP5; Mao et al. 1996] and 5-GTA ATT
GGA GCC GAC GGA AGG-3 [designed by the authors for the present analysis]). Pol II
products were sequenced using specific primers shown in Table 2. All sequences were analyzed
at least 6 times from both ends.
The DNA and the deduced amino acid sequences were compared with sequences in the
GenBank/EMBL databases using the basic local alignment search tool (BLAST;
www.ncbi.nlm.nih.gov/BLAST/). Sequences were aligned using CLUSTAL W (Thompson et
al. 1994), and the phylogenetic relationships among species were determined using the
neighbor-joining method (Saitou & Nei 1987) and parsimony, and maximum likelihood using
MEGA4 (Tamura et al. 2007), Paup* 4.0b10 (Swofford 2002), and ModelTest (Posada &
Crandall 1998) software. The tree was rooted using the lymphocystis disease virus as the
external group and its reliability was inferred using the Felsenstein (1985) bootstrap method
with 10 000 replicates.
Bacteriology
Tadpoles were collected, immediately euthanized with an overdose of tricaine methane
sulphonate (MS222, Finquel
®
, Argent Chemical Laboratories) and immersed for 30 s in 0.2%
peracetic acid solution to reduce external contamination. The liver, kidneys, and ascitic exudate
were obtained aseptically using sterilized surgical instruments. Samples were inoculated and
incubated in 4 different broths: brain heart infusion, triplicase soy broth, glucose azide, and
selenite cystine (DIFCO Labs), prepared according to the manufacturer’s indications. All
samples were incubated at 30°C for 24 to 72 h.
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Histopathology
Whole tadpoles were preserved in 10% buffered formaline (vol/vol) and processed according
to routine techniques. Paraffin-embedded blocks were sectioned in 4 to 5 μm sections and
stained with hematoxylin and eosin (H&E) for primary validation. In a second stage, selected
samples were stained using MacCallum-Goodpasture for bacterial detection. Fite for
mycobacteria, and PAS for fungus (Luna 1968).
Transmission electron microscopy (TEM)
Material for TEM was selected from lesions identified on histopathology slides. Once the lesion
was precisely located in the paraffin-embedded block, a 1 mm
3
tissue sample was extracted
for analysis. The retrieved tissue was deparaffined and fixed in 2.5% glutaraldehyde with the
addition of phosphate buffer (0.1 M, pH 7.0) and later processed for resin inclusion and positive
staining with uranyl acetate and lead citrate. Samples were observed in a Philips EM 208 TEM.
Parasitology
Wet mounts of skin were observed under an optical microscope for the parasite survey.
RESULTS
Epizootiology and clinical signs
The disease occurred throughout the year in all farms in the present survey, although the
incidence and prevalence were higher during the rainy season (October to April). Clinical signs
were observed in tadpoles in Gosner Stage 25 (Gosner 1960) ranging from 15 to 28 d old. Mass
mortalities affected the whole tank population within the first 24 h. In a short period, all tanks
harboring tadpoles within the same age range were affected, with an overall mortality between
95 and 100%. Newly hatched tadpoles did not show any sign of disease, and those in pre-
metamorphic stages were not affected.
Typically, diseased tadpoles stopped feeding and were lethargic. They lost their swimming
ability and remained at the bottom of the tank with erratic movements Abdominal distention
was a frequent finding, but some affected tadpoles evidenced pale color and cachexia (Fig. 2).
Skin lesions like ulcers or petechiae were not observed.
Cell culture, PCR, and sequence analysis
Xenopus sp. A6 cells inoculated with virus suspension obtained from sick tadpoles showed
signs of cytopathic effects after 48 h incubation. A6 cells damaged by the virus first rounded
up, and later contracted and elongated, some showing a star shape, and their cytoplasm became
very granular with signs of apoptosis. Then cells detached from the layer (Fig. 3).
PCR on DNA extracted from sick tadpoles was positive for MCP and Pol II. The MCP gene
primers yielded a specific fragment of about 1500 bp. Primers targeting the Pol II gene yielded
a product of about 380 bp (Fig. 4).
To clarify the taxonomic position of our isolate, we cloned and sequenced the MCP and partial
Pol II PCR fragments. Multiple alignments of MCP-deduced amino acid sequences showed
the phylogenetic relationships of RCV-BR with FV3 and other ranaviruses (Fig. 5). High
identities were obtained with published MCP sequences from anurans (Table 3). Multiple
sequence alignments of the Pol II-deduced amino acid sequences showed 100% identity with
FV3 (GenBank Accession No. AY548484), 98 % with tiger frog virus (GenBank Accession
No. AF389451), and 96% with Regina ranavirus (GenBank Accession No. AF368230) and
Ambystoma tigrinum stebbensi virus (GenBank Accession No. AY150217). Based on the
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alignments of MCP nucleotides, the neighbor-joining tree (Fig. 6) showed that selected
ranaviruses and RCV-BR form a tight cluster of closely related viruses. Moreover, RCV-BR
and FV3 are located in a single clade with high bootstrap values supporting this division. The
same results were obtained for Pol II (data not shown).
The RCV-BR MCP sequence was deposited to GenBank under Accession No. DQ897669.
Necropsy and histopathology
Autopsy of tadpoles with abdominal distension revealed abundant fluids filling the body cavity,
with a pale-colored liver associated with congestive and slightly hemorrhagic organs.
Cachectic tadpoles showed poor body conditions, including an absence of a fat body and pale
coloration of the liver with congestive kidneys.
Histological analysis of infected tadpoles showed various degrees of tissue damage and cell
necrosis over broad areas of tissue disruption. Lesions were prominent in the kidneys, liver,
and spleen. The kidneys were the most affected organs, with large necrotic areas evidencing
pyknosis and karyorrhexis associated with diffuse inflammatory infiltrate, mostly composed
of mononuclear lymphocytes and eosinophils (Fig. 7a). The liver also showed necrosis with
pyknosis and karyorrhexis, areas of steatosis, vacuolized hepatocytes, and mononuclear
infiltrate (Fig. 7b). The spleen repeated the same pattern of necrosis and inflammatory infiltrate.
Neither bacteria nor fungi were observed using specific histological detection techniques.
TEM
Tissue samples of sick tadpoles obtained from formalin-fixed blocks and reprocessed for TEM
analysis showed cell lyses, deformed nucleii with marginalized chromatin, absence of nuclear
membrane, cytoplasm with empty or altered organelles, and mitochondria without crystals.
Aggregates of iridovirus-like icosahedric particles in diverse assembly degrees were detected
in kidney samples, confirming viral presence in areas of tissue damage (Fig. 8).
Bacteriology and parasitology
Bacteriological analyses were negative for both tissue samples and ascitic exudates. Skin and
gills samples showed several parasite species, of which Trichodina spp. and Oodinium spp.
were the most common.
DISCUSSION
In the present study, we have identified a virus from the Ranavirus genus as the cause of mass
mortality episodes in young Rana catesbeiana tadpoles in 3 Brazilian farms. Clinical and
laboratory observations, including molecular characterization and TEM results, confirmed the
viral etiology of these mass deaths. Histological examination of the tissue lesions indicated
that bullfrog tadpoles died from viral injuries located mainly in the kidney, liver, and spleen.
Bacteria were not associated with the disease, as tissue cultures and MacCallum-Goodpasture-
stained histological slides were negative. Skin parasites were considered just an opportunistic
invasion and not associated with clinical signs and lesions. Toxic causes, always suspected in
acute syndromes, were discarded as each farm used different water sources and feed brands.
The fact that different ponds were not affected simultaneously and that younger tadpoles
remained healthy further ruled out this possibility.
The present evidence for a Ranavirus infection is consistent with the description of ‘abdominal
distension disease’ in China, affecting farmed Rana grylio and R. tigrina rugulosa (Zhang et
al. 2001, Weng et al. 2002).
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Brazilian Ranavirus does not seem to be a great threat to Rana catesbeiana as farmed
populations are well established, and disease outbreaks, despite their economic impact, were
solved after biosecurity and good management practices were implemented. Environmental
conditions within commercial frog farms should be the most important trigger for these
outbreaks contributing to increased susceptibility to viral infections. This disease seems to be
a typical epidemiological example of host–environment–pathogen interaction, where disease
outbreaks and pathogen virulence enhancement are associated with environmental and
management stressors. Similar considerations were quoted in reference to RGV pathogenesis
in R. grylio with lethal syndrome (Zhang et al. 2001) and adult R. catesbeiana infections (Majji
et al. 2006, Miller el al. 2007).
Ranviruses have been recognized as emerging pathogens, producing high mortalities in fish,
reptiles, and amphibians; a minimally pathogenic virus in one species can cause serious
diseases in others (Daszak et al. 1999. Chinchar 2002, Chinchar et al. 2005, Williams et al.
2005, Majji et al. 2006, Miller et al. 2007).
The high susceptibility of larval stages to ranaviruses has been established in Xenopus sp.
(Gantress et al. 2003, Robert et al. 2005, Williams et al. 2005). This is consistent with the
present results, as older tadpoles were not affected. However, others have reported that late-
stage tadpoles and new metamorphs of other anuran species (e.g. Rana sylvatica and R.
pipiens) appear to be more susceptible to Ranavirus infections (Green et al. 2002, Greer et al.
2005). This is not a contradiction, considering it may be an interplay between differential
susceptibility of age classes, coupled with cycles of viral virulence and attenuation underlying
this phenomenon, as well as the effect of Ranavirus infections often varying within host species
(Daszak et al. 2003, Williams et al. 2005).
Wolf et al. (1968) isolated tadpole edema virus (TEV) from grossly edematous Rana
catesbeiana and experimentally infected several amphibian species. Infected metamorphosing
bullfrogs showed lethargy and edema prior to death. A generalized eosinophilia with marked
infiltration in kidney tissues associated with necrosis and pyknotic nuclei was observed (Wolf
et al. 1968). The similar increase in eosinophils found in the present study suggests that
Ranavirus infection is associated with a pathophysiological host response involving an
accumulation of eosinophils in infected tissues, at least in American bullfrogs. In mammals,
eosinophils are pleiotropic multifunctional leukocytes involved in initiation and propagation
of diverse inflammatory responses, as well as modulators of innate and adaptive immunity
(Rothenberg & Hogan 2006). In addition to secreting various cytokines, they may participate
in virus-induced immune responses by processing and presenting complex viral proteins and/
or intact viral particles (Handzel et al. 1998). Whether eosinophils play a similar role in
amphibian innate and adaptive immunity and how critical they are in amphibian anti-
Ranavirus host response remains to be determined.
Sequence alignments of Pol II and MCP from RCV-BR showed 100 and 99.7% identity
respectively with published FV3 sequences as well as high identities with other Ranavirus
genus members. To determine the relationships among these viruses, we generated a neighbor-
Joining tree (Saitou & Nei 1987) using the MCP sequence information in Fig. 5. The tree in
Fig. 6 shows that all selected ranaviruses and RCV-BR form a tight cluster of closely related
viruses. Moreover, RCV-BR and FV3 are located in a single clade, with high bootstrap values
supporting this division. These results suggest that RCV-BR and FV3 are close relatives or
perhaps strains of the same virus.
The highly conserved MCP is diverse enough to be used to distinguish among closely related
isolates (Tidona et al. 1998). Do et al. (2005) analyzed 13 isolates of flounder (Paralichthys
olivaceus) iridoviruses (FLIVs); MCP-deduced amino acid sequences of the 13 FLIVs showed
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97 to 100% amino acid sequence identity to each other, suggesting that all 13 isolates have a
single origin. Jancovich et al. (2005) concluded that 18 geographically widespread
Ranavirus isolates in the USA corresponded to a single introduction, after determining genetic
divergences of <1 % for MCP sequences.
Studies performed with Iridoviridae showed that viruses isolated from the same geographic
region were genetically similar, whereas those from different areas were distinct (Mao et al.
1997, Hyatt et al. 2000, Marsh et al. 2002). FV3-like viruses were reported outside North
America in Rana temporaria from the UK (Hyatt et al. 2000) and R. grylio viruses isolated in
China (Zhang et al. 2001), as a consequence of amphibian translocations. TEV isolated from
R. catesbeiana in North America was signaled as being endemic to this species (Wolf et al.
1968) and could be a strain of FV3 (Essani & Granoff 1989). The present results along with
IE-ICP 18 identity reported by Galli et al. (2006) suggest that American bullfrogs may have
carried the virus to Brazil, illustrating the key role of amphibian translocation in the world
distribution of pathogens and particularly FV3. The minimum genetic differences between
RCV-BR and FV3, located in 2 geographically distant places, could be explained by DNA
viruses characteristically expressing mechanisms of co-divergence between host and virus,
determined by vicariance, in association to persistent infections by sexual or vertical
transmission (Holmes 2004).
Nevertheless, ranaviruses with high identities to FV3 within partial MCP sequences have been
also found in Venezuela (Zupanovic et al. 1998) and Argentina (Fox et al. 2006), suggesting
the possibility of on autochthonous species.
In agreement with Goldberg et al. (2003), it is necessary to continue studies on protein profiles
using amplified fragment length polymorphism (AFLP) and to obtain the complete RCV-BR
genome sequence to determine, with accuracy, similarities among these closely related viruses.
In conclusion, viruses of family Iridoviridae, genus Ranavirus are pathogenic to young Rana
catesbeiana tadpoles, and likely the cause of mass mortality commonly observed on Brazilian
frog farms. As for as we know, this is the first report of Ranavirus affecting aquatic organisms
in Brazil. Given that ranaviruses are now ‘notifiable’ diseases according to the World
Organization for Animal Health (OIE), this is of high relevance for frog farming and
aquaculture industry and export in the USA. Although the Brazilian Ranavirus may become
pathogenic for bullfrogs only under stressing conditions, it can be potentially virulent for other
South American amphibians, fish, or reptiles. We believe that Ranavirus-like disease
exemplifies the problems likely to arise with the intensive culturing of new species. More
systematic animal husbandry including defined disease-control strategies will be required for
long-term economically successful aquaculture industries. Further basic and applied research
will be needed to answer questions raised in the present study, such as viral origin and the
hazards associated with disease translocation and amphibian trade.
Acknowledgments
This work was performed with the financial support of Programa de Desarrollo Tecnológico-Dirección Nacional de
Ciencia y Tecnología (Ministerio de Educación y Cultura, Uruguay) and Coordenação de Aperfeiçoamento de Pessoal
de Nível Superior (Ministerio da Educação, Brazil), J.R. and H.M. were supported by NIH grant AI-2R24,
AI059830-06. We thank S. Q. P. de Mesquita, U. N. Rauecker, and M. Hipólito for their excellent technical assistance.
Fig. 1 was prepared by F. Mazzoni.
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Fig. 1.
Location of frog farms sampled in Goiás State. Brazil: 1: Fujioka; 2: Laranjeiras; 3; Dos Reis
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Fig. 2.
External gross lesions in Rana calesbeiana tadpoles with Ranavirus infection. In the center is
a normal tadpole, flanked by 2 ascitic tadpoles with ‘heart-shaped body’ (left) and 2 emaciated
tadpoles showing ‘arrow-shaped body’ (right). Scale bar = 2 cm
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Fig. 3.
Xenopus sp. kidney A6 cells inoculated with viral suspension obtained from sick Rana
catesbeiana tadpoles. (A) Mock-infected A6 cells; scale bar = 20 μm. (B) A6 cells with
cytopathic effect 48 h after inoculation at 25 to 27°C; star-shaped and elongated cells are
evidence of viral infection; scale bar = 10 μm
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Fig. 4.
(A) Amplification products of the MCP gene from the 3 Brazilian Rana catesbeiana viral
isolates (RCV-BR) (Lanes 1, 2, and 3) and frog virus 3 (Lane 4). Lane 5 is the negative control,
and Lane M is the molecular marker (1 kb Plus DNA ladder; Invitrogen), where ‘a’ indicates
1500 bp and ‘b’ 1000 bp. (B) Amplification products of Pol II gene from the 3 RCV-BR isolates
(Lanes 1, 2, and 3). Lane 4 is the negative control, and Lane M is the molecular marker (100
kb DNA ladder; Invitrogen), where ‘c’ indicates 500 bp. Purified virus genomic DNA was
used as a template in PCR reactions described in ‘Materials and methods’. PCR products were
separated on a 1 % agarose gel and visualized by staining with 0.5 μg ml
1
ethidium bromide
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Fig. 5.
Multiple alignment of deduced amino acid sequence of MCP from the Brazilian Rana
catesbeiana viral isolate (GenBank Accession No. DQ897669) along with other members of
the genus Ranavirus: frog virus (FV3; GenBank Accession No. AY548484); Rana grylio virus
(RGV 9806. 9807. 9808; Zhang et al. 2006); Bohle iridovirus (BIV; GenBank Accession No.
AY 187046); tiger frog virus (TFV; GenBank Accession Nos. AY033630 and AF389451);
epizootic haematopoietic necrosis virus (EHNV; GenBank Accession No. AY187045); and
Ambystoma tigrinum virus (ATV; GenBank Accession No. AY50217). Amino acid residues
differing from the Brazilian sequence are shaded
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Fig. 6.
Phylogenetic analysis of MCP sequences. Neighbor-joining tree constructed using multiple
alignment (and algorithms) presented in MEGA4 (Tamura et al. 2007). Degree of confidence
for each branch point was determined by bootstrap analysis (10000 repetitions). For virus
abbreviations, see Fig. 5. Lymphocystis disease virus (LCDV) used as external group from the
genus Lymphocystisvirus
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Fig. 7.
Rana catesbeiana tadpole. (A) Kidney showing lesions produced by Ranavirus. Complete loss
of normal architecture. Cell necrosis with pyknosis and karyorrhexis (arrowheads),
mononuclear lymphocyte infiltrate (white arrow), and eosinophilic infiltration (black arrows).
H&E stain. Scale bar = 100 μm, (B) Liver with lesions produced by Ranavirus. Diffuse necrosis
with pyknosis and karyorrhexis, areas of steatosis, vacuolized hepotocytes with loss of
trabecular structure, and mononuclear infiltrate. Arrowheads indicate normal hepatocytes.
H&E stain. Scale bar = 50 μm
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Fig. 8.
Transmission electron micrograph from kidney of affected Rana catesbeiana tadpole with
signs of ascites. Samples were obtained from paraffin-embedded blocks after precisely locating
lesions on histology slides. Complete (white arrow) and incomplete (black arrow) iridovirus-
like particles. Viral particles seem to emerge from a finely granular, slightly electron-dense
mass (arrowhead). Scale bar = 360 nm
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Table 1
Source of tadpoles, location information, and number of tadpoles analyzed from each farm. See Fig. 1 for farm
locations
Farm name
Location
Sampled tadpoles (n)
County GPS coordinates
Fujioka Hidrolândia 17° 02 17.03S
49° 12 46.94 W
250
Laranjeiras Gameleira 16° 20 28.75S
48° 44 19.63 W
200
Dos Reis Gameleira 16° 24 15.24 S
48° 46 03.70 W
50
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Table 2
Primers used for PCR analysis: MCPcomp (MCP gene complete coding region); Pol II (RNA polymerase DNA
dependent-Pol II); IE-ICP 18 (immediate early protein-ICP 18)
Target gene
Primer sequence (5–3)
Amplicon size (bp)
Forward Reverse
IE-ICP 18
ATGATCCAAGCCTACCTGTGC
a
AAATGTCCTAATCTATACACC
a 479
MCP ATGTCTTCTGTAACTGGTTCA
AAAGACCCGTTTTGCAGCAAAC
b 1483
Pol II TCACCGCCGCAGACATCTTTAG GTAACCGTTCTTTTCGCAGTGG 377
a
Galli et al. (2006);
b
Hyatt et al. (2000)
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Table 3
Identities obtained when the MCP nucleotide sequence from the Brazilian Rana catesbeiana viral isolate
(GenBank Accession No. DQ897669) was aligned with published MCP sequences from anurans. ‘Source’ is
GenBank Accession No. or literature reference
Virus % identity Source
FV3 99.7 AY548484
RGV 9506 99 Zhang et al. (2006)
RGV 9507 99 Zhang et al. (2006)
Bohle iridovirus 98 AY187046
Rana tigrina ranavirus 98 AY033630
98 AP389451
RGV 9508 97 Zhang et al. (2006)
Epizootic hematopoietic necrosis virus 96 AY187045
Ambystoma tigrinum virus 95 AY150217
Dis Aquat Organ. Author manuscript; available in PMC 2010 July 9.
... Ranaviruses occur on all continents except Africa and Antarctica (Duffus et al. 2015). Although most research on the impact of Rv in amphibians has taken place in North America (Jancovich et al. 1997, Bartlett et al. 2021) and the UK (Cunningham et al. 1996), other regions have reported Rv outbreaks, mainly related to aquaculture facilities (Zupanovic et al. 1998, Mazzoni et al. 2009, Brunner et al. 2021. In Latin America, declines associated with Rv have been documented in Costa Rica (Whitfield et al. 2012, Puschendorf et al. 2019, Venezuela (Zupanovic et al. 1998), Ecuador (Urgiles et al. 2021), Peru (Warne et al. 2016), Brazil (Mazzoni et al. 2009, Ruggeri et al. 2019, Chile (Soto-Azat et al. 2016), Nicaragua (Stark et al. 2014), Argentina (Fox et al. 2006) and Uruguay (Duffus et al. 2015). ...
... Although most research on the impact of Rv in amphibians has taken place in North America (Jancovich et al. 1997, Bartlett et al. 2021) and the UK (Cunningham et al. 1996), other regions have reported Rv outbreaks, mainly related to aquaculture facilities (Zupanovic et al. 1998, Mazzoni et al. 2009, Brunner et al. 2021. In Latin America, declines associated with Rv have been documented in Costa Rica (Whitfield et al. 2012, Puschendorf et al. 2019, Venezuela (Zupanovic et al. 1998), Ecuador (Urgiles et al. 2021), Peru (Warne et al. 2016), Brazil (Mazzoni et al. 2009, Ruggeri et al. 2019, Chile (Soto-Azat et al. 2016), Nicaragua (Stark et al. 2014), Argentina (Fox et al. 2006) and Uruguay (Duffus et al. 2015). ...
... The American bullfrog, Rana catesbeiana (Yuan et al. 2016), a native of eastern North America, is one of the most aggressive invasive animals worldwide, negatively impacting the native biodiversity of the environments it colonizes (Kats & Ferrer 2003). Bullfrogs are also known carriers of amphibian pathogens, tolerating Bd infection and transmitting the fungal pathogen to susceptible species that may experience massive die-offs (Mazzoni et al. 2009). Bullfrogs also play an important role in the dispersal of Rv to novel species , Une et al. 2009). ...
Article
Ranaviruses can cause mass mortality events in amphibians, thereby becoming a threat to populations that are already facing dramatic declines. Ranaviruses affect all life stages and persist in multiple amphibian hosts. The detrimental effects of ranavirus infections to amphibian populations have already been observed in the UK and in North America. In Central and South America, the virus has been reported in several countries, but the presence of the genus Ranavirus (Rv) in Colombia is unknown. To help fill this knowledge gap, we surveyed for Rv in 60 species of frogs (including one invasive species) in Colombia. We also tested for co-infection with Batrachochytrium dendrobatidis (Bd) in a subset of individuals. For Rv, we sampled 274 vouchered liver tissue samples collected between 2014 and 2019 from 41 localities covering lowlands to mountaintop páramo habitat across the country. Using quantitative polymerase chain reaction (qPCR) and end-point PCR, we detected Rv in 14 individuals from 8 localities, representing 6 species, including 5 native frogs of the genera Osornophryne, Pristimantis and Leptodactylus, and the invasive American bullfrog Rana catesbeiana. Bd was detected in 7 of 140 individuals, with 1 co-infection of Rv and Bd in an R. catesbeiana specimen collected in 2018. This constitutes the first report of ranavirus in Colombia and should set off alarms about this new emerging threat to amphibian populations in the country. Our findings provide some preliminary clues about how and when Rv may have spread and contribute to understanding how the pathogen is distributed globally.
... One of the species highlighted so far in this regard is the American bullfrog (L. catesbeianus), which seems to have played a key role in spreading the pathogen to new locations (Both et al., 2011;Mazzoni et al., 2009;Ruggeri et al., 2019;Schloegel et al., 2009Schloegel et al., , 2010. ...
... Cultured American bullfrogs often carry ranavirus infection FV3 and may have served as a vector transmitting the disease to native amphibians and fish in Brazil (Mazzoni et al., 2009;Ruggeri et al., 2019). It is striking those American bullfrogs have been introduced and now occur in nearly 40 countries in Africa, Asia, and North, Central, and South America, and islands of the Mediterranean, South Pacific, and Caribbean (Kraus, 2009). ...
Article
Full-text available
Ranaviral infections, a malady of ectothermic vertebrates, are becoming frequent, severe, and widespread, causing mortality among both wild and cultured species, raising odds of species extinctions and economic losses. This increase in infection is possibly due to the broad host range of ranaviruses and the transmission of these pathogens through regional and international trade in Asia, where outbreaks have been increasingly reported over the past decade. Here, we focus attention on the origins, means of transmission, and patterns of spread of this infection within the region. Infections have been recorded in both cultured and wild populations in at least nine countries/administrative regions, together with mass die-offs in some regions. Despite the imminent seriousness of the disease in Asia, surveillance efforts are still incipient. Some of the viral strains within Asia may transmit across host–taxon barriers, posing a significant risk to native species. Factors such as rising temperatures due to global climate change seem to exacerbate ranaviral activity, as most known outbreaks have been recorded during summer; however, data are still inadequate to verify this pattern for Asia. Import risk analysis, using protocols such as Pandora+, pre-border pathogen screening, and effective biosecurity measures, can be used to mitigate introduction of ranaviruses to uninfected areas and curb transmission within Asia. Comprehensive surveillance using molecular diagnostic tools for ranavirus species and variants will help in understanding the prevalence and disease burden in the region. This is an important step toward conserving native biodiversity and safeguarding the aquaculture industry.
... Ranaviruses (family Iridoviridae, Alphairidovirinae, genus Ranavirus) are large, double−stranded DNA viruses that infect a variety of ectothermic vertebrates, such as amphibians, reptiles, and fish [1][2][3][4]. The Chinese giant salamander is the largest amphibian in the world and has great ecological and commercial value. ...
Article
Full-text available
Ranavirus is a large nucleocytoplasmic DNA virus. Chinese giant salamander iridovirus (CGSIV) belongs to the ranavirus genus, and its replication involves a series of essential viral genes. Viral PCNA is a gene closely associated with viral replication. CGSIV−025L also encodes PCNA−like genes. We have described the function of CGSIV−025L in virus replication. The promoter of CGSIV−025L is activated during viral infection, and it is an early (E) gene that can be effectively transcribed after viral infection. CGSIV−025L overexpression promoted viral replication and viral DNA replication. siRNA interfered with CGSIV−025L expression and attenuated viral replication and viral DNA replication. The Δ025L−CGSIV strain with the deletion of CGSIV−025L could not replicate normally and could be rescued by the replenishment of 025L. CGSIV−025L was proven to be an essential gene for CGSIV by overexpression, interference, and deletion mutation experiments. CGSIV−025L was found to interact with CGSIV−062L by yeast two−hybrid, CoIP, and GST pulldown. Thus, the current study demonstrated that CGSIV−025L is an essential gene of CGSIV, which may be involved in viral infection by participating in viral DNA replication and interacting with replication−related proteins.
... As such, there is grave concern for the potential emergence of more virulent recombinant ranavirus strains that could further exacerbate these plights. In fact, it is a concern that has been realised; one documented instance of ranaviral recombination occurred between two distinct lineages belonging to the Common midwife toad virus (CMTV)-and Frog virus 3 (FV3)-like species, whose recombinant daughter strain exhibited increased virulence compared to a prior outbreak of the presumed parent (Claytor et al., 2017;Mazzoni et al., 2009). Farming and culture practices that cohouse animals in high densities, which may have disparate trade origins, increases the likelihood of coinfections from two or more viral genotypes and lineages (Bowden et al., 2004;Pisoni et al., 2007). ...
Thesis
Ranavirus is a genus of large double-stranded DNA viruses (family Iridoviridae) that parasitise three taxonomic classes of poikilothermic vertebrates. They are important wildlife pathogens of conservation and economic concern, posing significant threat to amphibian biodiversity and aquaculture commerce. Despite substantial advances since their discovery in the 1960s, the evolutionary history of ranaviruses remains poorly characterised. The aim of this thesis is to advance the characterisation of Ranavirus evolutionary dynamics to contemporary standards. A large whole-genome dataset was collated and scrutinised, combining all publicly available material with a novel collection of isolate genomes. Cutting-edge microbial genomics tools were applied to gain insight into ranavirus genetic diversity, phylogeography, and genome evolution. Delineation of the Ranavirus pan-genome served as a foundation to conduct phylogenetic and population genetic analyses. Where the limitations of alignment-based methodologies were met, alignment-free techniques were employed to make full use of all genomic information. Phylogenetic reconstructions uncovered unique genetic diversity incompatible with current taxonomic demarcations amongst several lineages of Ranavirus. Pervasive genetic recombination was detected across the genus, and certain lineages contained a high degree of ancestral polyphyly. Recurrent patterns linked to animal trade and aquaculture were detected. Extensively polyphyletic viruses were isolated from captive animals, and population genetic analysis revealed ancestry components shared by ranaviruses isolated from farmed animals on separate continents. Finally, phylodynamic analysis suggests human-mediated translocation of FV3-like ranaviruses began more than a century before present. The inadequacies of current Ranavirus taxonomy are highlighted by this work, and suggests a substantial diversity remains to be characterised. The processes by which ranaviral genetic diversity is generated appears particularly dynamic, with significant contributions made via recombination between distinct linages. Altogether, this thesis underscores the vital impact trade and captive rearing of fish and herpetofauna have had on the global spread of ranaviruses and their processes of genetic diversification. Finally, these results suggest that anthropogenic influences commenced decades earlier than previously thought, likely upon the acceleration of modern globalisation.
... The routes of trade from Brazil to other The legal or illegal trade of live animals represents one of the main paths of pathogens transport and introduction around the world (Fisher and Garner, 2020;Martel et al., 2014;O'Hanlon et al., 2018;Rodgers et al., 2011). The main pathogens threatening amphibians in the world (chytrid fungi and ranaviruses) have been found in Brazilian bullfrog farms (Mazzoni et al., 2009;Oliveira et al., 2020;Ribeiro et al., 2019;Santos et al., 2020), and in internationally traded bullfrogs (Brunner et al., 2019;O'Hanlon et al., 2018;Schloegel et al., 2012Schloegel et al., , 2009. While the batrachochytrid fungus is restricted to amphibians (Fisher and Garner, 2020;Scheele et al., 2019), ranaviruses are also pathogenic to other ectothermic vertebrates, fish and reptiles (Duffus et al., 2015). ...
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World population growth demands an accelerated increase in food production especially that of animal origin. One of the main global challenges is to couple such a production with environmental health. The production of aquatic animals, i.e., aquaculture, tends to be less harmful to the environment due to the reduction of crop yield requirements and the decrease in land areas for cultivation and grazing. In addition, it is associated with a wide range of cultivated species and production systems, which is related to the resilience of the global food system. The bullfrog, Aquarana catesbeiana (Shaw, 1802), production, known as frog farming or ranaculture, could represent an economically competitive and environmentally conscious production opportunity. Brazil is a pioneer and one of the world's largest bullfrog producers. However, up to this date there is no data compilation about its current and past production. Here, we present current data on bullfrog production, national and international trade, and relevant environmental issues related to frog farming in this country. We compiled information about Brazilian bullfrog farms from February 2019 to January 2020, and obtained information on production and trade directly from the producers. We described the frog farming workflow and classified the farms by the processes they accomplish. We mapped 151 bullfrog farms distributed mostly in southeastern Brazil. In 2019 we estimated a production of about 400 tons (gross weight), which generated roughly 200 net tons of bullfrog meat, moving about 1.9 million USD. In addition, we mapped the local, interstate, and international bullfrog production commercial routes. Brazilian frog farming has great expansion potential; nevertheless, improvements are required, both in the consumer market, as well as in the production and overall frog farming workflow. We highlight the main aspects that need improvement to expand and generate visibility for frog farming in Brazil, from an economic and environmental feasible perspective.
... So far, Bsal has not been reported from Brazil, and its arrival must be avoided. On the other hand, Rv, previously detected in frogs in the legal commercial trade (Brunner et al. 2019), has been recently found in the Atlantic Forest (Ruggeri et al. 2019), and already been associated with local anuran die-offs, both in frog farms (Mazzoni et al. 2009) and in the wild (Ruggeri et al. 2019). ...
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Illegal wildlife trade is historical and has not been contained. With the popularization of the internet and social media globally, we hypothesized that illegal trade would be facilitated and predict that trade will increase. To test the hypothesis, we surveyed amphibian illegal trade on Facebook groups in the last 5 y between 2015 and 2020 in Brazil and compared our results to previous studies conducted a decade ago. We also tested whether some of the illegally traded amphibians were carrying the chytrid fungus, Batrachochytrium dendrobatidis (Bd), by means of qPCR analyses. We also looked for information about new exotic species in Brazil. We found that the online illegal trade was indeed increasing in Brazil, becoming at least six times higher than previously reported. We did not find Bd in traded amphibians whereas we found an individual frog of the non-native Asian microhylid Kaloula pulchra in the wild in northeastern Brazil. Retrieving information about the illegal trade on the internet was easy; therefore, we advocate for a rapid and efficient action by law enforcement agents to stop or restrain the current amphibian illegal trade. Although we did not find Bd in the sampled amphibians, the sample size was small (n = 45) and thus it is still possible that the trade is contributing to the spread of the pathogens.
... Susceptibility to FV3 differs across amphibian species (Hoverman et al., 2010 and within a species depending on the species' life stage, genotype (De Jesús Andino et al., 2012;Gantress et al., 2003), and environment (Allender et al., 2013;Brand et al., 2016). Susceptible amphibians exhibit severe pathology such as skin lesions, swelling, and internal hemorrhage (Forzán et al., 2017;Miller et al., 2007) that can result in up to 100% mortality in tadpoles Hoverman et al., 2011;Mazzoni et al., 2009) and post-metamorphs (Forzán et al., 2015), but appears to vary with initial viral infection dose (Bienentreu et al., 2020). Relatively resistant amphibians develop mild symptoms including lethargy, skin shedding, and cutaneous erythema, but often recover in 2-3 weeks (Gantress et al., 2003) and instead may serve as asymptomatic reservoirs of FV3 (Robert et al., 2007). ...
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Frog virus 3 (FV3) causes mortality in a range of amphibian species. Despite the importance of the skin epithelium as a first line of defence against FV3, the interaction between amphibian skin epithelial cells and FV3 remains largely uncharacterized. Here, we used newly established Xenopus laevis skin epithelial-like cell lines, Xela DS2 and Xela VS2, to study the susceptibility and permissiveness of frog skin epithelial cells to FV3, and the innate immune antiviral and proinflammatory gene regulatory responses of these cells to FV3. Both cell lines are susceptible and permissive to FV3, yet do not exhibit appreciable transcript levels of scavenger receptors thought to be used by FV3 for cellular entry. Xela DS2 and Xela VS2 upregulate antiviral and proinflammatory cytokine transcripts in response to poly(I:C) but not to FV3 or UV-inactivated FV3. Poly(I:C) pretreatment limits FV3 replication and FV3-induced cytopathic effects in both cell lines. Thus, Xela DS2 and Xela VS2 can support FV3 replication, represent in vitro systems to investigate antiviral responses of frog skin epithelial cells, and can serve as novel tools for screening compounds that initiate effective antiviral programs to limit FV3 replication.
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Ranaviruses have been associated with amphibian, fish and reptile mortality events worldwide and with amphibian population declines in parts of Europe. Xenopus laevis is a widespread invasive amphibian species in Chile. Recently, Frog virus 3 (FV3), the type species of the Ranavirus genus, was detected in two wild populations of this frog near Santiago in Chile, however, the extent of ranavirus infection in this country remains unknown. To obtain more information about the origin of ranavirus in Chile, its distribution, species affected, and the role of invasive amphibians and freshwater fish in the epidemiology of ranavirus, a surveillance study comprising wild and farmed amphibians and wild fish over a large latitudinal gradient (2,500 km) was carried out in 2015–2017. In total, 1,752 amphibians and 496 fish were tested using a ranavirus-specific qPCR assay, and positive samples were analyzed for virus characterization through whole genome sequencing of viral DNA obtained from infected tissue. Ranavirus was detected at low viral loads in nine of 1,011 X. laevis from four populations in central Chile. No other amphibian or fish species tested were positive for ranavirus, suggesting ranavirus is not threatening native Chilean species yet. Phylogenetic analysis of partial ranavirus sequences showed 100% similarity with FV3. Our results show a restricted range of ranavirus infection in central Chile, coinciding with X. laevis presence, and suggest that FV3 may have entered the country through infected X. laevis , which appears to act as a competent reservoir host, and may contribute to the spread the virus locally as it invades new areas, and globally through the pet trade.
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A aquicultura é uma das atividades agrícolas que mais cresce no mundo, e o Brasil se destaca neste cenário pelo seu grande potencial na produção de organismos aquáticos. O clima tropical, a disponibilidade de recursos hídricos, espécies nativas são alguns dos fatores que favorecem a atividade em nosso país, onde o estudo da aquicultura vem ganhando cada vez mais espaço. Desta forma, a presente obra visa contribuir com o conhecimento aquícola agregando textos das diferentes subáreas da aquicultura. Do cultivo de macroalgas ao potencial de moluscos para aquariofilia; da ranicultura à bioinvasão ocasionada pela aquicultura; da preservação promovida pelos cultivos de pequena escala às inovações tecnológicas para o desenvolvimento aquícola; dos entraves atuais da carcinicultura ao estudo dos organismos associados às ostras. Desejamos uma boa leitura!
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Tecnologias em geral como por exemplo a Inteligência Artificial, sempre parece algo do futuro, coisas de filme científico, algo imaterial ou inalcançável para alguns de nós meros mortais. De forma mais simples do que nosso imaginário conduz, essas tecnologias já não fazem parte do futuro na aquicultura e sim do nosso presente. Exemplos claros de como essas tecnologias podem ser ou já são aplicados no setor aquícola são apresentados nesse capítulo, de forma equilibrada entre a generalização, para quem não é da área, mas tem curiosidade e interesse, e a particularização do tema em um nível maior de detalhes, para aqueles que já não querem ficar na superfície da informação. Tudo isso está contido no conceito da indústria 4.0, ou agricultura de precisão onde é feita uma breve contextualização antes dos interessantes exemplos do capítulo. E o mais relevante para as perspectivas atuais dessas tecnologias para o desenvolvimento da aquicultura brasileira, uma discussão do exigente mercado de trabalho e a direção que os técnicos profissionais devem seguir para compor esse grupo interdisciplinar no trabalho que não é mais caracterizado por um indivíduo e sim uma equipe desenvolvedora dos problemas que porventura são demandadas pelas empresas.
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Frog virus 3 (FV3) is the type species member of the genus Ranavirus (family Iridoviridae). To better understand the molecular mechanisms involved in the replication of FV3, including transcription of its highly methylated DNA genome, we have determined the complete nucleotide sequence of the FV3 genome. The FV3 genome is 105903 bp long excluding the terminal redundancy. The G + C content of FV3 genome is 55% and it encodes 98 nonoverlapping potential open reading frames (ORFs) containing 50- 1293 amino acids. Eighty-four ORFs have significant homology to known proteins of other iridoviruses, whereas twelve of these unique FV3 proteins do not share homology to any known protein. A microsatellite containing a stretch of 34 tandemly repeated CA dinucleotide in a noncoding region was detected. To date, no such sequence has been reported in any animal virus.
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A large number of workers have reported the culture of amphibian cells, but most of the accounts are found in older literature and few of them report success in maintaining monolayer strains through serial subculture. The first permanent amphibian line is that of Wolfe and Quimby (27), derived from bullfrog tongue. This line subsequently proved to be fibroblastic in morphology and subtetraploid in chromosome number. To date, it has passed through hundreds of cell generations in culture. Freed et al. (13, 14) and Seto (26) have also reported extended serial subculture of amphibian cell lines.
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A new method called the neighbor-joining method is proposed for reconstructing phylogenetic trees from evolutionary distance data. The principle of this method is to find pairs of operational taxonomic units (OTUs [= neighbors]) that minimize the total branch length at each stage of clustering of OTUs starting with a starlike tree. The branch lengths as well as the topology of a parsimonious tree can quickly be obtained by using this method. Using computer simulation, we studied the efficiency of this method in obtaining the correct unrooted tree in comparison with that of five other tree-making methods: the unweighted pair group method of analysis, Farris's method, Sattath and Tversky's method, Li's method, and Tateno et al.'s modified Farris method. The new, neighbor-joining method and Sattath and Tversky's method are shown to be generally better than the other methods.
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We investigate the contribution of the Iberian bat fauna to the cryptic diversity in Europe using mitochondrial (cytb and ND1) and nuclear (RAG2) DNA sequences. For each of the 28 bat species known for Iberia, samples covering a wide geographic range within Spain were compared to samples from the rest of Europe. In this general screening, almost 20% of the Iberian species showed important mitochondrial discontinuities (K2P distance values > 5%) either within the Iberian or between Iberian and other European samples. Within Eptesicus serotinus and Myotis nattereri, levels of genetic divergence between lineages exceeded 16%, indicating that these taxa represent a complex of several biological species. Other well-differentiated lineages (K2P distances between 5–10%) appeared within Hypsugo savii, Pipistrellus kuhlii and Plecotus auritus, suggesting the existence of further cryptic diversity. Most unsuspected lineages seem restricted to Iberia, although two have crossed the Pyrenees to reach, at leas...
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— We studied sequence variation in 16S rDNA in 204 individuals from 37 populations of the land snail Candidula unifasciata (Poiret 1801) across the core species range in France, Switzerland, and Germany. Phylogeographic, nested clade, and coalescence analyses were used to elucidate the species evolutionary history. The study revealed the presence of two major evolutionary lineages that evolved in separate refuges in southeast France as result of previous fragmentation during the Pleistocene. Applying a recent extension of the nested clade analysis (Templeton 2001), we inferred that range expansions along river valleys in independent corridors to the north led eventually to a secondary contact zone of the major clades around the Geneva Basin. There is evidence supporting the idea that the formation of the secondary contact zone and the colonization of Germany might be postglacial events. The phylogeographic history inferred for C. unifasciata differs from general biogeographic patterns of postglacial colonization previously identified for other taxa, and it might represent a common model for species with restricted dispersal.