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Microbial Interventions in Bioremediation of Nuclear Waste
Abstract
The management of nuclear waste, characterized by its long-lasting radioactivity and environmental risks, calls for innovative remediation strategies. Traditional disposal methods have proven inadequate, compelling exploration into alternative approaches. Among these, microbial bioremediation has emerged as a promising, eco-friendly strategy to mitigate the extensive impact of nuclear waste. Microorganisms, spanning bacteria, archaea, and fungi, exhibit remarkable capabilities in interacting with various forms of nuclear waste, including radionuclides, heavy metals, and organic contaminants. Leveraging mechanisms like bioaccumulation, biotransformation, and biomineralization, these microorganisms effectively immobilize or detoxify hazardous elements. Certain microbial species thrive in extreme conditions, such as environments characterized by elevated radiation levels and hostile pH conditions, aligning their utility with the demands of nuclear waste repositories. Recent advances in microbial genetics and metabolic pathway elucidation have significantly enhanced the precision and efficiency of bioremediation techniques. Microbial bioremediation offers environmental and economic advantages over conventional methods, mitigating long-term risks. This chapter underscore the pivotal role of microorganisms in nuclear waste bioremediation, presenting a responsible, cost-effective solution to a pressing challenge of the nuclear age. Ongoing research in microbial bioremediation promises to further enhance the field, ultimately contributing to the development of safer, more efficient strategies for nuclear waste management.
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Strontium-90 ( ⁹⁰ Sr) is an artificial radioisotope produced by nuclear fission, with a relatively long half-life of 29 years. This radionuclide is released into the environment in the event of a...
Introduction: Industrial activities related with the uranium industry are known to generate hazardous waste which must be managed adequately. Amongst the remediation activities available, eco-friendly strategies based on microbial activity have been investigated in depth in the last decades and biomineralization-based methods, mediated by microbial enzymes (e.g., phosphatase), have been proposed as a promising approach. However, the presence of different forms of phosphates in these environments plays a complicated role which must be thoroughly unraveled to optimize results when applying this remediation process.
Methods: In this study, we have looked at the effect of different phosphate sources on the uranium (U) biomineralization process mediated by Microbacterium sp. Be9, a bacterial strain previously isolated from U mill tailings. We applied a multidisciplinary approach (cell surface characterization, phosphatase activity, inorganic phosphate release, cell viability, microscopy, etc.).
Results and Discussion: It was clear that the U removal ability and related U interaction mechanisms by the strain depend on the type of phosphate substrate. In the absence of exogenous phosphate substrate, the cells interact with U through U phosphate biomineralization with a 98% removal of U within the first 48 h. However, the U solubilization process was the main U interaction mechanism of the cells in the presence of inorganic phosphate, demonstrating the phosphate solubilizing potential of the strain. These findings show the biotechnological use of this strain in the bioremediation of U as a function of phosphate substrate: U biomineralization (in a phosphate free system) and indirectly through the solubilization of orthophosphate from phosphate (P) containing waste products needed for U precipitation.
One-sentence summary
Our simulation shows widespread radioactive contamination in the event of nuclear accident(s) during the Ukraine war, but the extent and direction of the impact will depend on the timing of the accident
Different activities related to uranium mining and nuclear industry may have a negative impact on the environment. Bioremediation of nuclear pollutants using microorganisms is an effective, safe, and economic method. The present study compared the uranium biosorption efficiency of two immobilized algae: Nostoc sp. (cyanophyte) and Scenedesmus sp. (chlorophyte). Effects of metal concentration, contact time, pH, and biosorbent dosage were also studied. The maximum biosorption capacity (60%) by Nostoc sp. was obtained at 300 mg/l uranium solution, 60 min, pH 4.5, and 4.2 g/l algal dosage, whereas Scenedesmus sp. maximally absorbed uranium (65 %) at 150 mg/l uranium solution, 40 min, pH 4.5, and 5.6 g/l of algal dosage. The interaction of metal ions as Na2SO4, FeCl3, CuCl2, NiCl2, CoCl2, CdCl2, and AlCl3 did not support the uranium biosorption by algae. The obtained data was adapted to the linearized form of the Langmuir isotherm model. The experimental qmax values were 130 and 75 mg/g for Nostoc sp. and Scenedesmus sp., respectively. Moreover, the pseudo-second-order kinetic model was more applicable, as the calculated parameters were close to the experimental data. The biosorbents were also characterized by Fourier-transform infrared spectroscopy (ATR-FTIR), energy-dispersive X-ray spectroscopy (EDX), and scanning electron microscopy (SEM) analyses. The results suggest the applicability of algae, in their immobilized form, for recovery and biosorption of uranium from aqueous solution.
It is the acquisition of unique traits that adds to the enigma of microbial capabilities to carry out extraordinary processes. One such ecosystem is the soil exposed to radionuclides, in the vicinity of atomic power stations. With the aim to study thorium (Th) tolerance in the indigenous bacteria of such soil, the bacteria were isolated and screened for maximum thorium tolerance. Out of all, only one strain AM3, found to tolerate extraordinary levels of Th (1500 mg L ⁻¹ ), was identified to be belonging to genus Providencia and showed maximum genetic similarity with the type strain P. vermicola OP1T. This is the first report suggesting any bacteria to tolerate such high Th and we propose to term such microbes as ‘ thoriotolerant ’. The medium composition for cultivating AM3 was optimized using response surface methodology (RSM) which also led to an improvement in its Th-tolerance capabilities by 23%. AM3 was found to be a good producer of EPS and hence one component study was also employed for its optimization. Moreover, the EPS produced by the strain showed interaction with Th, which was deduced by Fourier Transform Infrared (FTIR) spectroscopy.
Aim:
Radionuclide imaging and therapies produce radioactive liquid waste that may lead to significant radiation exposure to the general public. The study aims to assess the radiation exposure rate to public sewerage from a modified delay tank facility. We shall also evaluate the exposure rates and overall radioactivity at several points.
Materials and methods:
After having appropriate permission from the AERB, we measured the radiation exposure from the radionuclide therapy ward. Ward has three isolation beds and a single delay and decay tank of a capacity of 7500 liters. Effluents from the delay tank are processed at the filtration plant of the institute and subsequently released in the public sewerage. We obtained samples from several sites to determine discharged radioactivity.
Results:
A total of 38 patients received 129.4 ± 42 mCi (Range 40- 200) radioiodine therapy during the study. Discharge of the tanks was done two times during the study. The radioactivity discharges into aeration plant were 89.2 and 71.2 mCi that correspond to 440.05 and 351 MBq/m3, respectively. This was diluted by the aeration tank (6 million liters). Finally, at the discharge time, the radioactivity in the discharge was 1.6 and 1.5 MBq/m3, respectively. The highest exposure rates were 14 μSv/h near the delay tank, which rapidly decreased on moving to the surrounding.
Conclusion:
Our study indicates that the addition of the dilution method and close monitoring may significantly reduce the radiation exposure and overall radioactivity release from the facility. Old facilities that do not have space to add up the tank capacity may get a benefit from it. A small change in the practice, such as admitting patients alternate months or providing extra decay time for radioactive waste, may lead to a cost-effective alternative.
Four fungal and one bacterial isolates were isolated from a liquid waste sample of Nuclear Material Authority. Those dried biomasses were screened for uranium (U) and thorium (Th) adsorption efficiency where the most potent isolate was identified as Aspergillus niger. Using U or Th synthetic solutions many factors were investigated for controlling the biosorption process to conduct the optimum process conditions (the solution pH, contact time, elemental initial concentration, biomass dosage, and sorption temperature). Aspergillus niger was examined ESEM-EDX and the FTIR techniques before and after the sorption process, also the data were handled by different kinetics and isothermal models. Application on the real liquid waste revealed that the bio-uptake capacities were 18.5 and 11.1 mg/g for U and Th respectively.
Many efforts have focused on the adsorption of metals from contaminated water by microbes. Synechococcus PCC7002, a major marine cyanobacteria, is widely applied to remove metals from the ocean’s photic zone. However, its ability to adsorb cesium (Cs) nuclides has received little attention. In this study, the biosorption behavior of Cs(I) from ultrapure distilled water by living Synechococcus PCC7002 was investigated based on kinetic and isotherm studies, and the biosorption mechanism was characterized by Fourier-transform infrared spectroscopy, Raman spectroscopy, scanning electron microscopy, transmission electron microscopy, energy-dispersive X-ray spectrometry, and three-dimensional excitation emission matrix fluorescence spectroscopy. Synechococcus PCC7002 showed extremely high tolerance to Cs ions and its minimal inhibitory concentration was 8.6 g/L. Extracellular polymeric substances (EPS) in Synechococcus PCC7002 played a vital role in this tolerance. The biosorption of Cs by Synechococcus PCC7002 conformed to a Freundlich-type isotherm model and pseudo-second-order kinetics. The binding of Cs(I) was primarily attributed to the extracellular proteins in EPS, with the amino, hydroxyl, and phosphate groups on the cell walls contributing to Cs adsorption. The biosorption of Cs involved two mechanisms: Passive adsorption on the cell surface at low Cs concentrations and active intracellular adsorption at high Cs concentrations. The results demonstrate that the behavior and mechanism of Cs adsorption by Synechococcus PCC7002 differ based on the Cs ions concentration.
The widespread use of uranium for civilian purposes causes a worldwide concern of its threat to human health due to the long-lived radioactivity of uranium and the high toxicity of uranyl ion (UO2²⁺). Although uranyl–protein/DNA interactions have been known for decades, fewer advances are made in understanding their structural-functional impacts. Instead of focusing only on the structural information, this article aims to review the recent advances in understanding the binding of uranyl to proteins in either potential, native, or artificial metal-binding sites, and the structural-functional impacts of uranyl–protein interactions, such as inducing conformational changes and disrupting protein-protein/DNA/ligand interactions. Photo-induced protein/DNA cleavages, as well as other impacts, are also highlighted. These advances shed light on the structure-function relationship of proteins, especially for metalloproteins, as impacted by uranyl–protein interactions. It is desired to seek approaches for biological remediation of uranyl ions, and ultimately make a full use of the double-edged sword of uranium.
Uranium (U) has no known essential biological functions. Furthermore, it is well known for its toxicity, radioactivity, and carcinogenic potency. Impacts on human health due to U exposure have been studied extensively by many researchers. Chronic exposure to low-level U isotopes (radionuclides) may be interlinked with cancer etiology and at high exposure levels, also kidney disease. Other important issues covered U and fertilizers, and also U in soils or human tissues as an easily measurable indicator element in a pathophysiological examination. Furthermore, phosphate fertilization is known as the important source of contamination with U in the agricultural land, mainly due to contamination in the phosphate rock applied for fertilizer manufacture. Therefore, long-term usage of U-bearing fertilizers can substantially increase the concentration of U in fertilized soils. It should also be noted that U is an active redox catalyst for the reaction between DNA and H2O2. This review is aimed to highlight a series on various hydro-geochemical aspects in different water sources and focused on the comparison of different U contents in the drinking water sources and presentation of data in relation to health issues.
This research presents a case study on the remediation of a radioactive waste (uranium: U) utilizing a multi-objective fuzzy optimization in an electrocoagulation process for the iron-stainless steel and aluminum-stainless steel anode/cathode systems. The incorporation of the cumulative uncertainty of result, operational cost and energy consumption are essential key elements in determining the feasibility of the developed model equations in satisfying specific maximum contaminant level (MCL) required by stringent environmental regulations worldwide. Pareto-optimal solutions showed that the iron system (0 μg/L U: 492 USD/g-U) outperformed the aluminum system (96 μg/L U: 747 USD/g-U) in terms of the retained uranium concentration and energy consumption. Thus, the iron system was further carried out in a multi-objective analysis due to its feasibility in satisfying various uranium standard regulatory limits. Based on the 30 μg/L MCL, the decision-making process via fuzzy logic showed an overall satisfaction of 6.1% at a treatment time and current density of 101.6 min and 59.9 mA/cm², respectively. The fuzzy optimal solution reveals the following: uranium concentration – 5 μg/L, cumulative uncertainty – 25 μg/L, energy consumption – 461.7 kWh/g-U and operational cost based on electricity cost in the United States – 60.0 USD/g-U, South Korea – 55.4 USD/g-U and Finland – 78.5 USD/g-U.
We evaluated the potential sequestration of cesium (Cs+) by microalgae under heterotrophic growth conditions in an attempt to ultimately develop a system for treatment of radioactive wastewater. Thus, we examined the effects of initial Cs+ concentration (100–500 μM), pH (5–9), K+ and Na+ concentrations (0–20 mg/L), and different organic carbon sources (acetate, glycerol, glucose) on Cs+ removal. Our initial comparison of nine microalgae indicated that Desmodesmus armatus SCK had removed the most Cs+ under various environmental conditions. Addition of organic substrates significantly enhanced Cs+ uptake by D. armatus, even in the presence of a competitive cation (K+). We also applied magnetic nanoparticles coated with a cationic polymer (polyethylenimine) to separate 137Cs-containing microalgal biomass under a magnetic field. Our technique of combining bioaccumulation and magnetic separation successfully removed more than 90% of the radioactive 137Cs from an aqueous medium. These results clearly demonstrate that the method described here is a promising bioremediation technique for treatment of radioactive liquid waste.
Chromium and uranium are highly toxic metals that contaminate many natural environments. We investigated their mechanisms of toxicity under anaerobic conditions using nitrate-reducing Pseudomonas stutzeri RCH2, which was originally isolated from a chromium-contaminated aquifer. A random barcode transposon site sequencing library of RCH2 was grown in the presence of the chromate oxyanion (Cr[VI]O42−) or uranyl oxycation (U[VI]O22+). Strains lacking genes required for a functional nitrate reductase had decreased fitness as both metals interacted with heme-containing enzymes required for the later steps in the denitrification pathway after nitrate is reduced to nitrite. Cr[VI]-resistance also required genes in the homologous recombination and nucleotide excision DNA repair pathways, showing that DNA is a target of Cr[VI] even under anaerobic conditions. The reduced thiol pool was also identified as a target of Cr[VI] toxicity and psest_2088, a gene of previously unknown function, was shown to have a role in the reduction of sulfite to sulfide. U[VI] resistance mechanisms involved exopolysaccharide synthesis and the universal stress protein UspA. As the first genome-wide fitness analysis of Cr[VI] and U[VI] toxicity under anaerobic conditions, this study provides new insight into the impact of Cr[VI] and U[VI] on an environmental isolate from a chromium contaminated site, as well as into the role of a ubiquitous protein, Psest_2088.
Biofilm-mediated bioremediation is an emerging field and needs to be studied extensively to achieve pragmatic results toward the betterment of the environment. In recent times, contamination of the environment with hazardous heavy metals has increased at an alarming rate. Although there are many chemical treatment methods for metal detoxification, biological processes are preferred since they are environmentally safe and the bioprocess is techno-economically viable. Among the various methodologies available for heavy metal remediation, the biofilm-based bioremediation technologies are promising. Therefore, it is necessary to understand how bacteria develop heavy metal/toxic metal resistance in a biofilm mode of adaptation in environments contaminated with toxic metals. With the available literature, it is known that metal resistance mechanisms for planktonic microbial cells and biofilm matrix embedded cells are entirely different. Therefore, the genetic basis of these resistance mechanisms needs to be studied extensively for a proper insight into the genetic approaches for metal bioremediation. Many important metal detoxification genes have been discovered; however, owing to the vast majority of the microbial diversity and environmental conditions, a complete understanding of the microbial genetic machinery is required to develop a suitable toxic metal remediation strategy. This chapter describes the physical and genetic basis of heavy metal tolerance and its detoxification bioprocesses by microbial biofilms.
The basidiomycetous fungus Cryptococcus neoformans has been known to be highly radiation resistant and has been found in fatal radioactive environments such as the damaged nuclear reactor at Chernobyl. To elucidate the mechanisms underlying the radiation resistance phenotype of C. neoformans, we identified genes affected by gamma radiation through genome-wide transcriptome analysis and characterized their functions. We found that genes involved in DNA damage repair systems were upregulated in response to gamma radiation. Particularly, deletion of recombinase RAD51 and two DNA-dependent ATPase genes, RAD54 and RDH54, increased cellular susceptibility to both gamma radiation and DNA-damaging agents. A variety of oxidative stress response genes were also upregulated. Among them, sulfiredoxin contributed to gamma radiation resistance in a peroxiredoxin/thioredoxin-independent manner. Furthermore, we found that genes involved in molecular chaperone expression, ubiquitination systems, and autophagy were induced, whereas genes involved in the biosynthesis of proteins and fatty acids/sterols were downregulated. Most importantly, we discovered a number of novel C. neoformans genes, the expression of which was modulated by gamma radiation exposure, and their deletion rendered cells susceptible to gamma radiation exposure, as well as DNA damage insults. Among these genes, we found that a unique transcription factor containing the basic leucine zipper domain, named Bdr1, served as a regulator of the gamma radiation resistance of C. neoformans by controlling expression of DNA repair genes, and its expression was regulated by the evolutionarily conserved DNA damage response protein kinase Rad53. Taken together, the current transcriptome and functional analyses contribute to the understanding of the unique molecular mechanism of the radiation-resistant fungus C. neoformans.
Unlabelled:
Extreme radiation-resistant microorganisms can survive doses of ionizing radiation far greater than are present in the natural environment. Radiation resistance is believed to be an incidental adaptation to desiccation resistance, as both hazards cause similar cellular damage. Desert soils are, therefore, promising targets to prospect for new radiation-resistant strains. This is the first study to isolate radiation-resistant microbes by using gamma-ray exposure preselection from the extreme cold desert of the Antarctic Dry Valleys (a martian surface analogue). Halomonads, identified by 16S rRNA gene sequencing, were the most numerous survivors of the highest irradiation exposures. They were studied here for the first time for both their desiccation and irradiation survival characteristics. In addition, the association between desiccation and radiation resistance has not been investigated quantitatively before for a broad diversity of microorganisms. Thus, a meta-analysis of scientific literature was conducted to gather a larger data set. A strong correlation was found between desiccation and radiation resistance, indicating that an increase in the desiccation resistance of 5 days corresponds to an increase in the room-temperature irradiation survival of 1 kGy. Irradiation at -79°C (representative of average martian surface temperatures) increases the microbial radiation resistance 9-fold. Consequently, the survival of the cold-, desiccation-, and radiation-resistant organisms isolated here has implications for the potential habitability of dormant or cryopreserved life on Mars.
Key words:
Extremophiles-Halomonas sp.-Antarctica-Mars-Ionizing radiation-Cosmic rays.
The urease-positive fungi Pestalotiopsis sp. and Myrothecium gramineum, isolated from calcareous soil, were examined for their properties of CaCO3 and SrCO3 biomineralization. After incubation in media amended with urea and CaCl2 and/or SrCl2 , calcite (CaCO3 ), strontianite (SrCO3 ), vaterite in different forms (CaCO3 , (Cax Sr1-x )CO3 ) and olekminskite (Sr(Sr,Ca)(CO3 )2 ) were precipitated and fungal "footprints" were observed on mineral surfaces. The amorphous precipitate mediated by Pestalotiopsis sp. grown with urea and equivalent concentrations of CaCl2 and SrCl2 was identified as hydrated Ca and Sr carbonates by Fourier transform infrared spectroscopy. Liquid media experiments showed M. gramineum possessed the highest Sr(2+) removal ability and ∼49% of supplied Sr(2+) was removed from solution when grown in media amended with urea and 50 mM SrCl2 . Furthermore, this organism could also precipitate 56% of the available Ca(2+) and 28% of the Sr(2+) in the form of CaCO3 , SrCO3 and (Cax Sr1-x )CO3 when incubated in urea-amended media and equivalent CaCl2 and SrCl2 concentrations. This is the first report of biomineralization of olekminskite and coprecipitation of Sr into vaterite mediated by fungi. These findings suggest that urease-positive fungi could play an important role in the environmental fate, bioremediation or biorecovery of Sr or other metals and radionuclides that form insoluble carbonates.
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The aim of the present work was to engineer bacteria for the removal of Co in contaminated effluents. Radioactive
cobalt (60Co) is known as a major contributor for person-sievert budgetary because of its long half-life and high γ-
energies. Some bacterial NiCoT genes were described to have preferential uptake for cobalt. In this study the
NiCoT genes nxiA and nvoA from Rhodopseudomonas palustris CGA009 (RP) and Novosphingobium
aromaticivorans F-199 (NA) respectively, were cloned under the control of the groESL promoter. These genes
were expressed in Deinococcus radiodurans in reason of its high resistance to radiation as compared to other
bacterial strains. Using qualitative real time-PCR, we showed that the expression of NiCoT-RP and NiCoT-NA is
induced by cobalt and nickel. The functional expression of these genes in bioengineered D. radiodurans R1 strains resulted in >60% removal of 60Co (≥ 5.1 nM) within 90 min from simulated spent decontamination solution
containing 8.5 nM of Co, even in presence of >10 mM of Fe, Cr and Ni. D. radiodurans R1 (DR-RP and DR-NA)
showed superior survival to recombinant E. coli (ARY023) expressing NiCoT-RP and NA and efficiency in Co
remediation up to 6.4 kGy. Thus, the present study reports a remarkable reduction in biomass requirements (2kg)
compared to previous studies using wild type bacteria (50 kg) or ion-exchanger resins (8000 kg) for treatment of
~105 L spent decontamination solutions (SDS).
Radionuclides in the environment are a major human and environmental health concern. Like the Chernobyl disaster of 1986, the Fukushima Daiichi nuclear disaster in 2011 is once again causing damage to the environment: a large quantity of radioactive waste is being generated and dumped into the environment, and if the general population is exposed to it, may cause serious life-threatening disorders. Bioremediation has been viewed as the ecologically responsible alternative to environmentally destructive physical remediation. Microorganisms carry endogenous genetic, biochemical and physiological properties that make them ideal agents for pollutant remediation in soil and groundwater. Attempts have been made to develop native or genetically engineered (GE) microbes for the remediation of environmental contaminants including radionuclides. Microorganism-mediated bioremediation can affect the solubility, bioavailability and mobility of radionuclides. Therefore, we aim to unveil the microbial-mediated mechanisms for biotransformation of radionuclides under various environmental conditions as developing strategies for waste management of radionuclides. A discussion follows of '-omics'-integrated genomics and proteomics technologies, which can be used to trace the genes and proteins of interest in a given microorganism towards a cell-free bioremediation strategy.
Particular microbes from substrates at the low-level radioactive waste repository in the Ignalina NPP territory were exposed to (239)Pu (IV) at low pH under aerobic conditions. Pu(III) and Pu(IV) were separated and quantitatively evaluated using the modified anion exchange method and alpha spectrometry. Tested bacteria Bacillus mycoides and Serratia marcescens were more effective in Pu reduction than Rhodococcus fascians. Fungi Paecillomyces lilacinus and Absidia spinosa var. spinosa as well as bacterium Rhodococcus fascians did not alter the plutonium oxidation state.
The aim of the present research was to study the biofilms developed in a Spanish nuclear power plant and their ability to entrap radionuclides. In order to carry this out, a bioreactor, which was then submerged in a spent nuclear fuel pool, was designed. To characterise the biofilm on two different metallic materials (stainless steel and titanium), standard culture microbiological methods and molecular biology tools, as well as epifluorescence and scanning electron microscopy were used. The bacterial composition of the biofilm belongs to several phylogenetic groups (alpha, beta, and gamma-Proteobacteria, Actinobacteridae, and Firmicutes). The radioactivity of the biofilms was measured by gamma-ray spectrometry. Biofilms were able to retain radionuclides from radioactive water, especially (60)Co. The potential use of these biofilms in bioremediation of radioactive water is discussed.
We examined the ability of the metal-reducing bacteria Geobacter metallireducens GS-15 and Shewanella oneidensis MR-1 to reduce Pu(VI) and Pu(V). Cell suspensions of both bacteria reduced oxidized Pu [a mixture of Pu(VI) and Pu(V)] to
Pu(IV). The rate of plutonium reduction was similar to the rate of U(VI) reduction obtained under similar conditions for each
bacteria. The rates of Pu(VI) and U(VI) reduction by cell suspensions of S. oneidensis were slightly higher than the rates observed with G. metallireducens. The reduced form of Pu was characterized as aggregates of nanoparticulates of Pu(IV). Transmission electron microscopy images
of the solids obtained from the cultures after the reduction of Pu(VI) and Pu(V) by S. oneidensis show that the Pu precipitates have a crystalline structure. The nanoparticulates of Pu(IV) were precipitated on the surface
of or within the cell walls of the bacteria. The production of Pu(III) was not observed, which indicates that Pu(IV) was the
stable form of reduced Pu under these experimental conditions. Experiments examining the ability of these bacteria to use
Pu(VI) as a terminal electron acceptor for growth were inconclusive. A slight increase in cell density was observed for both
G. metallireducens and S. oneidensis when Pu(VI) was provided as the sole electron acceptor; however, Pu(VI) concentrations decreased similarly in both the experimental
and control cultures.
Preliminary findings indicate that PprI is a regulatory protein that stimulates transcription and translation of recA and other DNA repair genes in response to DNA damage in the extremely radioresistant bacterium Deinococcus radiodurans. To define the repertoire of proteins regulated by PprI and investigate the in vivo regulatory mechanism of PprI in response to gamma radiation, we performed comparative proteomics analyses on wild type (R1) and a pprI knock-out strain (YR1) under conditions of ionizing irradiation. Results of two-dimensional electrophoresis and MALDI-TOF MS or MALDI-TOF/TOF MS indicated that in response to low dose gamma ray exposure 31 proteins were significantly up-regulated in the presence of PprI. Among them, RecA and PprA are well known for their roles in DNA replication and repair. Others are involved in six different pathways, including stress response, energy metabolism, transcriptional regulation, signal transduction, protein turnover, and chaperoning. The last group consists of many proteins with uncharacterized functions. Expression of an additional four proteins, most of which act in metabolic pathways, was down-regulated in irradiated R1. Additionally phosphorylation of two proteins was under the control of PprI in response to irradiation. The different functional roles of representative PprI-regulated genes in extreme radioresistance were validated by gene knock-out analysis. These results suggest a role, either directly or indirectly, for PprI as a general switch to efficiently enhance the DNA repair capability and extreme radioresistance of D. radiodurans via regulation of a series of pathways.
Removal of radioactive cobalt at trace levels (approximately nM) in the presence of large excess (10(6)-fold) of corrosion product ions of complexed Fe, Cr, and Ni in spent chemical decontamination formulations (simulated effluent) of nuclear reactors is currently done by using synthetic organic ion exchangers. A large volume of solid waste is generated due to the nonspecific nature of ion sorption. Our earlier work using various fungi and bacteria, with the aim of nuclear waste volume reduction, realized up to 30% of Co removal with specific capacities calculated up to 1 microg/g in 6-24 h. In the present study using engineered Escherichia coli expressing NiCoT genes from Rhodopseudomonas palustris CGA009 (RP) and Novosphingobium aromaticivorans F-199 (NA), we report a significant increase in the specific capacity for Co removal (12 microg/g) in 1-h exposure to simulated effluent. About 85% of Co removal was achieved in a two-cycle treatment with the cloned bacteria. Expression of NiCoT genes in the E. coli knockout mutant of NiCoT efflux gene (rcnA) was more efficient as compared to expression in wild-type E. coli MC4100, JM109 and BL21 (DE3) hosts. The viability of the E. coli strains in the formulation as well as at different doses of gamma rays exposure and the effect of gamma dose on their cobalt removal capacity are determined. The potential application scheme of the above process of bioremediation of cobalt from nuclear power reactor chemical decontamination effluents is discussed.
Microbial ureolysis offers the potential to remove metals including Sr²⁺ as carbonate minerals via the generation of alkalinity coupled to NH4⁺ and HCO3– production. Here, we investigated the potential for bacteria, indigenous to sediments representative of the U.K. Sellafield nuclear site where ⁹⁰Sr is present as a groundwater contaminant, to utilize urea in order to target Sr²⁺-associated (Ca)CO3 formation in sediment microcosm studies. Strontium removal was enhanced in most sediments in the presence of urea only, coinciding with a significant pH increase. Adding the biostimulation agents acetate/lactate, Fe(III), and yeast extract to further enhance microbial metabolism, including ureolysis, enhanced ureolysis and increased Sr and Ca removal. Environmental scanning electron microscopy analyses suggested that coprecipitation of Ca and Sr occurred, with evidence of Sr associated with calcium carbonate polymorphs. Sr K-edge X-ray absorption spectroscopy analysis was conducted on authentic Sellafield sediments stimulated with Fe(III) and quarry outcrop sediments amended with yeast extract. Spectra from the treated Sellafield and quarry sediments showed Sr²⁺ local coordination environments indicative of incorporation into calcite and vaterite crystal structures, respectively. 16S rRNA gene analysis identified ureolytic bacteria of the genus Sporosarcina in these incubations, suggesting they have a key role in enhancing strontium removal. The onset of ureolysis also appeared to enhance the microbial reduction of Fe(III), potentially via a tight coupling between Fe(III) and NH4⁺ as an electron donor for metal reduction. This suggests ureolysis may support the immobilization of ⁹⁰Sr via coprecipitation with insoluble calcium carbonate and cofacilitate reductive precipitation of certain redox active radionuclides, e.g., uranium.
Uranium pollution in groundwater environment has become an important issue of global concern. In this study, a strain of Desulfovibrio desulfuricans was isolated from the tailings of acid heap leaching, and was shown to be able to remove uranium from water via biosorption, bio-reduction, passive biomineralization under uranium stress, and active metabolically dependent bioaccumulation. This research explored the effects of nutrients, pH, initial uranium and sulfate concentration on the functional groups, uranium valence, and crystal size and morphology of uranium immobilization products. Results showed that tetravalent and hexavalent phosphorus-containing uranium minerals was both formed. In sulfate-containing water where Desulfovibrio desulfuricans A3-21ZLL can grow, the sequestration of uranium by bio-reduction was significantly enhanced compared to that with no sulfate loading or no growth. Ungrown Desulfovibrio desulfuricans A3-21ZLL or dead ones released inorganic phosphate group in response to the stress of uranium, which associated with soluble uranyl ion to form insoluble uranium-containing precipitates. This study revealed the influence of hydrochemical conditions on the mineralogy characteristics and spatial distribution of microbial uranium immobilization products. This study is conducive to the long-term and stable bioremediation of groundwater in decommissioned uranium mining area.
The biofilm matrix can be considered to be a shared space for the encased microbial cells, comprising a wide variety of extracellular polymeric substances (EPS), such as polysaccharides, proteins, amyloids, lipids and extracellular DNA (eDNA), as well as membrane vesicles and humic-like microbially derived refractory substances. EPS are dynamic in space and time and their components interact in complex ways, fulfilling various functions: to stabilize the matrix, acquire nutrients, retain and protect eDNA or exoenzymes, or offer sorption sites for ions and hydrophobic substances. The retention of exoenzymes effectively renders the biofilm matrix an external digestion system influencing the global turnover of biopolymers, considering the ubiquitous relevance of biofilms. Physico-chemical and biological interactions and environmental conditions enable biofilm systems to morph into films, microcolonies and macrocolonies, films, ridges, ripples, columns, pellicles, bubbles, mushrooms and suspended aggregates — in response to the very diverse conditions confronting a particular biofilm community. Assembly and dynamics of the matrix are mostly coordinated by secondary messengers, signalling molecules or small RNAs, in both medically relevant and environmental biofilms. Fully deciphering how bacteria provide structure to the matrix, and thus facilitate and benefit from extracellular reactions, remains the challenge for future biofilm research. In this Review, Flemming et al. revisit our understanding of the biofilm matrix, focusing on the diversity of the extracellular polymeric substance components and novel aspects of mechanisms and consequences of their functional interactions.
Radioactive uranium wastewater contains a large amount of radionuclide uranium and other heavy metal ions. The radioactive uranium wastewater discharged into the environment will not only pollute the natural environment, but also threat human health. Therefore, the treatment of radioactive uranium wastewater is a current research focus for many researchers. The treatment in radioactive uranium wastewater mainly includes physical, chemical and biological methods. At present, the using of biological treatment to treat uranium in radioactive uranium wastewater has been gradually shown its superiority and advantages. Deinococcus radiodurans is a famous microorganism with the most radiation resistant to ionizing radiation in the world, and can also resist various other extreme pressures. D. radiodurans can be directly used for the adsorption of uranium in radioactive waste water, and it can also transform other functional genes into D. radiodurans to construct genetically engineered bacteria, and then applied to the treatment of radioactive uranium containing wastewater. Radionuclides uranium in radioactive uranium-containing wastewater treated by D. radiodurans involves a lot of mechanisms. This article reviews currently the application of D. radiodurans that directly or construct genetically engineered bacteria in the treatment of radioactive uranium wastewater and discusses the mechanism of D. radiodurans in bioremediation of uranium. The application of constructing an engineered bacteria of D. radiodurans with powerful functions in uranium-containing wastewater is prospected.
The Osamu Utsumi uranium mine occupies a 20 km2 area in the city of Caldas, which is located in the state of Minas Gerais, Brazil. Since mining activities ended at Osamu Utsumi 24 years ago, the surrounding area has become contaminated by acid effluents containing high concentrations of uranium. Thus, the aim of this study was to assess the uranium bioremediation capacity of 57 fungi isolated from the mine area. In tolerance tests, 38% (22) of the fungal isolates were considered tolerant to uranium, including 10 Penicillium species. At a uranium concentration of 2000 mg L-1 48 fungi did not exhibit mycelial growth index inhibition. Minimal inhibitory concentration (MIC) analysis showed growth of 25 fungi above a uranium concentration of 8000 mg L-1. At high uranium concentrations, some fungi (i.e., Talaromyces amestolkiae and Penicillium citrinum) showed morphological changes and pigment (melanin) production. Among the fungal isolates, those considered to be more tolerant to uranium were isolated from soil and sediment samples containing higher concentrations of heavy metal. When comparing the results of resistance/tolerance tests with those for uranium biosorption capacity, we concluded that the fungi isolated from the Osamu Utsumi mine with the best potential for uranium bioremediation were Gongronella butleri, Penicillium piscarium, Penicillium citrinum, Penicillium ludwigii, and Talaromyces amestolkiae. Biosorption tests with live fungal biomass showed that 11 species had a high potential for uranium uptake from contaminated water.
226Ra is a naturally occurring radionuclide with a half-life of 1600 y. In contrast, 90Sr is a radionuclide of sole anthropogenic origin, produced by nuclear fission reactions and has a half-life of 29 y; each of these radionuclides poses potential threats to human and ecosystem health. Here, the cyanobacterium G. lithophora, capable of forming intracellular amorphous calcium carbonate inclusions, was investigated for its ability to uptake 226Ra and 90Sr. In BG-11 medium, G. lithophora accumulated 3.9 µg g-1 226Ra within 144 h and 47.9 ng g-1 90Sr within 1 h, corresponding to ~99% removal of trace radionuclides. The presence of high concentration Ca2+ in the background media solution did not inhibit 90Sr and 226Ra uptake by G. lithophora. In contrast, dead biomass of G. lithophora accumulated 0.8 µg g-1 226Ra and 8.87 ng g-1 90Sr. Moreover, Synechocystis, a non-biomineralizing cyanobacteria removed only 14% and 25% of 226Ra and 90Sr, respectively. This suggested that sequestration of 90Sr and 226Ra was not intrinsic to all cyanobacteria but was likely a specific biological trait of G. lithophora related to the formation of intracellular amorphous Ca-carbonates. The unique ability of G. lithophora to uptake 90Sr and 226Ra at high rates makes it an attractive candidate for further studies involving bioremediation of these radionuclides.
The extensive application of radioactive element uranium (U) and its compounds in the nuclear industry has significantly increased the risk of exposure to the environment. Therefore, research on the safety risks and toxicity mechanisms of U exposure has received increasing attention. This paper reviews the toxic effects of U on different species under different conditions, and summarizes the potential toxicity mechanisms. Under the exposure of U, reactive oxygen species (ROS) produced in cells will damage membrane structure in cells, and inhibit respiratory chain reaction by reducing the production of NADH and ATP. It also induce the expression of apoptosis factors such as Bcl-2, Bid, Bax, and caspase family to cause apoptosis cascade reaction, leading to DNA degradation and cell death. We innovatively list some methods to reduce the toxicity of U because some microorganisms can precipitate uranyl ions through biomineralization or reduction processes. Our work provides a solid foundation for further risk assessment of U.
The biosorption properties of water-soluble radioactive cesium (¹³⁷Cs) by microalga Haematococcus pluvialis were evaluated with different cell conditions, and its cesium-uptake rate was compared with that by other microalgae, Chlorella vulgaris and Anabaena sp. Photo-induced H. pluvialis red cyst rapidly removed radioactive cesium from the solution by bioaccumulation. We showed that the effectiveness of ¹³⁷Cs uptake is dependent on the specific cell condition of even the same microalgal species. While the H. pluvialis red cyst removed almost 95% of the soluble ¹³⁷Cs in 48 h, both H. pluvialis intermediate cells and C. vulgaris showed 90% uptake efficiency of ¹³⁷Cs with slow uptake rate. The energy dispersive spectrometer data demonstrated that the cesium uptake acceleration by inducing astaxanthin in H. pluvialis red cyst involves the cesium accumulation through the potassium transport channel. The long-term monitoring experiments of the cesium uptake showed that only 40% of ¹³⁷Cs remained in collapsed H. pluvialis cell fragments after 12 months.
Uranium mining is an environmental concern because of runoff and the potential for toxic effects on the biota. To investigate uranium toxicity to freshwater invertebrates, we conducted a 96-h acute toxicity test to determine lethal concentrations (testing concentrations up to 262 mg L -1) for three stream invertebrates: a shredder caddisfly, Schizopelex festiva Rambur (Trichoptera, Sericostomatidae); a detri-tivorous isopod, Proasellus sp. (Isopoda, Asellidae); and a scraper gastropod, Theodoxus fluviatilis (Gastropoda, Neritidae). Next, we ran a chronic-toxicity test with the most tolerant species (S. festiva) to assess if uranium concentrations found in some local streams (up to 25 mg L -1) affect feeding, growth and respiration rates. Finally, we investigated whether S. festiva takes up uranium from the water and/or from ingested food. In the acute test, S. festiva survived in all uranium concentrations tested. LC 50-96-h for Proasellus sp and T. fluviatilis were 142 mg L -1 and 24 mg L -1 , respectively. Specimens of S. festiva exposed to 25 mg L -1 had 47% reduced growth compared with specimens under control conditions (21.5 ± 2.9 vs. 40.6 ± 4.9 mg of mass increase animal -1day -1). Respiration rates (0.40 ± 0.03 mg O 2 h -1 mg animal -1) and consumption rates (0.54 ± 0.05 mg mg animal -1 day -1 ; means ± SE) did not differ between treatments. Under laboratory conditions S. festiva accumulated uranium from both the water and the ingested food. Our results indicate that uranium can be less toxic than other metals or metalloids produced by mining activities. However, even at the low concentrations observed in streams affected by abandoned mines, uranium can impair physiological processes, is bioaccumulated, and is potentially transferred through food webs.
Uranium contamination of soil has been a major concern with respect to its toxicity, accumulation in the food chain and persistence in the environment. Owing to these problems, remediation of uranium-contaminated soils has been investigated by various techniques. This review focuses on the challenges and complexities associated with the remediation of uranium-contaminated soil at field level. Therefore, laboratory studies have been excluded from this review. Challenges faced during remediation of uranium-contaminated soil using various techniques such as microbial/phyto/chemical/material based strategies have been discussed with suitable examples. Various factors that have a major influence on uranium decontamination process in soil such as soil type, uranium speciation, the presence of coexisting ions and organics, etc., have been highlighted. This review brings out the significance of the integrated role of various factors which determine the efficiency of the uranium decontamination process.
This study reports the removal of uranium in underground wastewater using a Nigerian clay-based membrane. The clay and sintered clay were characterized using XRD, XRF, TGA/DTA, FESEM and PSD. The raw clay was mixed with cassava starch (10, 15, 20 and 25 wt %) and sintered at a temperature of 1300 °C. A multi-point BET analysis of the produced clay-based membranes was conducted to determine the surface area, pore volume and average pore size. Sintering characteristics were determined by apparent porosity, bulk density and flexural strength. The radioactivity of the feed and the permeated water were counted using a gamma spectrometer with an HPGe detector. From the XRD, TGA and FESEM, 1300 °C was found to be optimum for the mullite formation from the clay. The average pore sizes of the produced membranes from the BET results were observed to be in the range from 51–70 Å and with a steady state flux range of the tested membranes in the range 1.92×10^−5–2.09×10^−5 m3m−2s−1. The permeation flux produced is of high quality with a rejection in the range of 1.78 to 2.56 Bq/l of the uranium activity by the tested membranes. This low-cost membrane will have an application for the treatment of uranium-containing wastewater from fracking, oil exploration and phosphate mining industries.
Thorium(IV) biosorption is investigated by citric acid treated mangrove endophytic fungus Fussarium sp. #ZZF51 (CA-ZZF51) from South China Sea. The biosorption process was optimized at pH 4.5, equilibrium time 90min, initial thorium(IV) concentration 50mgL(-1) and adsorbent dose 0.6gL(-1) with 90.87% of removal efficiency and 75.47mgg(-1) of adsorption capacity, which is obviously greater than that (11.35mgg(-1)) of the untreated fungus Fussarium sp. #ZZF51 for thorium(IV) biosorption under the condition of optimization. The experimental data are analyzed by using isotherm and kinetic models. Kinetic data follow the pseudo-second-order model and equilibrium data agree very well with the Langmuir model. In addition, FTIR analysis indicates that hydroxyl, amino, and carbonyl groups act as the important roles in the adsorption process.
Contamination of aquifers or sediments by radioactive strontium ((90)Sr) is a significant environmental problem. In the present study, microbially induced calcite precipitation (MICP) was evaluated for its potential to remediate strontium from aquifer quartz sand. A Sr resistant urease producing Halomonas sp. was characterized for its potential role in bioremediation. The bacterial strain removed 80% of Sr from soluble-exchangeable fraction of aquifer quartz sand. X-ray diffraction detected calcite, vaterite and aragonite along with calcite-strontianite (SrCO(3)) solid solution in bioremediated sample with indications that Sr was incorporated into the calcite. Scanning electron micrography coupled with energy-dispersive X-ray further confirmed MICP process in remediation. The study showed that MICP sequesters soluble strontium as biominerals and could play an important role in strontium bioremediation from both ecological and greener point of view.
The cell-associated adsorption of thorium or uranium from the solution containing each metal only at pH 3.50 using various microorganisms was examined. Among the species tested, high thorium adsorption abilities were exhibited by strains of the gram-positive bacteria Arthrobacter nicotianae IAM12342, Bacillus megaterium IAM1166, B. Subtilis IAM1026, Micrococcus luteus IAM1056, Rhodococcus erythropolis IAM1399, and Streptomyces levoris HUT6156. And high uranium adsorption abilities were found in some gram-positive bacterial strains S. albus HUT6047, S. levoris HUT6156, and A. nicotianae IAM12342. Among these highly efficient thorium and uranium adsorbing microorganisms, S. levoris, which could adsorb the largest amount of uranium from the aqueous solution at pH 3.50, could adsorb about 383 mol thorium and 390 mol uranium per gram dry weight of microbial cells from the solution containing thorium or uranium at pH 3.50. The amount and time course of thorium adsorbed were almost unaffected by co-existing uranium; however, the adsorption of thorium was faster when carried out after the adsorption of uranium. Thorium adsorption also became faster when uranium was added after thorium adsorption. The effect of pH on thorium adsorption was also discussed.
The objectives of these studies are to determine the equilibrium concentration and kinetics of metal sorption on sulfate-reducing bacteria (SRB) isolates. Adsorption establishes the net reversible cellular metal uptake and is related to SRB metal toxicity and the effects of environmental factors. Results from biosorption equilibria and kinetics of copper(II) and zinc(II) ions on Desulfovibrio desulfuricans and the effects of adsorption of these metals on SRB are discussed. Adsorption studies were conducted using stationary phase cells with equilibrium uptake at 24 h and pHs in the range of 4–7. Equilibrium adsorption in milligram of metal/g dry cell for copper(II) of 2.03 (pH 4.0) and 16.7 (pH 5.0) and zinc(II) of 6.40 (pH 5.5), 13.8 (pH 6.0), 39.2 (pH 6.2) and 49.6 (pH 6.6) was measured experimentally. Negligible biosorption of copper and zinc was found below pH 4.0, with metal sorption increasing within a limited range of pH mainly due to the neutral and/or deprotonated state of binding ligands on cell walls. Competition of metal ions during biosorption was investigated by conducting sorption experiments with Zn(II) using potassium phosphate buffer (KP) and deionized/distilled water. Zn(II) sorption capacity was lower in KP buffer than deionized water due to competition from potassium ions. Scanning Electron Microscope micrographs indicated that metal biosorption on SRB may be related to the production of extracellular polymeric substance (e.g., polysaccharide).
The recovery of uranium from nuclear industrial effluent has been studied using laboratory column and polymeric ion exchange resin. The industrial effluent, at pH around 10, contains uranium (40 mg/L), ammonium (80 g/L) and carbonate (170 g/L) and cannot be discharged without previous treatment. Uranium is in the form of uranyl quadrivalent complex anions [UO2(CO3)3]4−. The resin IRA 910 U was employed for its specific application for uranium extraction. Adsorption was carried out at flow rate of 1.0, 2.0, and 5.0 mL/min, which corresponds to a retention time of 10, 5.0 and 2.5 min, respectively. The use of ion the exchange technique makes the recovery of more than 98% of the uranium possible. Elution was carried out with ammonium carbonate solutions and also with the diluted effluent. The eluate contained uranium ranging from 2.4 to 2.7 g/L. The solution eluate might be recycled back into the process with the advantage of saving this valuable metal.
Studies of radionuclides in the environment have entered a new era with the renaissance of nuclear energy and associated fuel reprocessing, geological disposal of high-level nuclear wastes, and concerns about national security with respect to nuclear non-proliferation. This work presents an overview on sources of anthropogenic radionuclides in the environment, as well as a brief discussion of salient geochemical behavior of important radionuclides. We first discuss the following major anthropogenic sources and current developments that have lead, or could potentially contribute, to the radionuclide contamination of the environment: (1) nuclear weapons program; (2) nuclear weapons testing; (3) nuclear power plants; (4) uranium mining and milling; (5) commercial fuel reprocessing; (6) geological repository of high-level nuclear wastes that include radionuclides might be released in the future, and (7) nuclear accidents. Then, we briefly summarize the inventory of radionuclides 99Tc and 129I, as well as geochemical behavior for radionuclides 99Tc, 129I, and 237Np, because of their complex geochemical behavior, long half-lives, and presumably high mobility in the environment; biogeochemical cycling and environment risk assessment must take into account speciation of these redox-sensitive radionuclides.
Introduction:
The biosorption characteristics of strontium ions using fungus Aspergillus terreus were investigated. Experimental parameters affecting the biosorption process such as pH, contact time, initial metal concentration, and temperature were studied.
Mathematical description:
Fungus A. terreus exhibited the highest strontium uptake capacity at 15°C at an initial strontium ion concentration of 876 mg L(-1) and an initial pH of 9. Biosorption capacity increased from 219 to 308 mg g(-1) with a decrease in temperature from 45°C to 15°C at this initial strontium concentration. The equilibrium data fitted very well to the Langmuir adsorption model in the concentration range of strontium ions and at all the temperatures studied.
Conclusion:
Evaluation of the experimental data in terms of biosorption dynamics showed that the biosorption of strontium onto fungus followed the pseudo-second-order dynamics well (R(2) > 0.985). The calculated thermodynamics parameters (-1.64 < ∆G° < -1.93 kJ mol(-1) at temperatures of 45-15°C, ∆H° = -4.83 kJ mol(-1) and ∆S° = -0.01 kJ mol(-1) K(-1)) showed that the biosorption of strontium ions were feasible, spontaneous, and exothermic at the temperature ranges of 15-45°C.
The bacterium Deinococcus radiodurans shows remarkable resistance to a range of damage caused by ionizing radiation, desiccation, UV radiation, oxidizing agents, and electrophilic mutagens. D. radiodurans is best known for its extreme resistance to ionizing radiation; not only can it grow continuously in the presence of chronic radiation (6 kilorads/h), but also it can survive acute exposures to gamma radiation exceeding 1,500 kilorads without dying or undergoing induced mutation. These characteristics were the impetus for sequencing the genome of D. radiodurans and the ongoing development of its use for bioremediation of radioactive wastes. Although it is known that these multiple resistance phenotypes stem from efficient DNA repair processes, the mechanisms underlying these extraordinary repair capabilities remain poorly understood. In this work we present an extensive comparative sequence analysis of the Deinococcus genome. Deinococcus is the first representative with a completely sequenced genome from a distinct bacterial lineage of extremophiles, the Thermus-Deinococcus group. Phylogenetic tree analysis, combined with the identification of several synapomorphies between Thermus and Deinococcus, supports the hypothesis that it is an ancient group with no clear affinities to any of the other known bacterial lineages. Distinctive features of the Deinococcus genome as well as features shared with other free-living bacteria were revealed by comparison of its proteome to the collection of clusters of orthologous groups of proteins. Analysis of paralogs in Deinococcus has revealed several unique protein families. In addition, specific expansions of several other families including phosphatases, proteases, acyltransferases, and Nudix family pyrophosphohydrolases were detected. Genes that potentially affect DNA repair and recombination and stress responses were investigated in detail. Some proteins appear to have been horizontally transferred from eukaryotes and are not present in other bacteria. For example, three proteins homologous to plant desiccation resistance proteins were identified, and these are particularly interesting because of the correlation between desiccation and radiation resistance. Compared to other bacteria, the D. radiodurans genome is enriched in repetitive sequences, namely, IS-like transposons and small intergenic repeats. In combination, these observations suggest that several different biological mechanisms contribute to the multiple DNA repair-dependent phenotypes of this organism.
Hematite, a type of inorganic-sorptive medium, was used for the removal of U (VI) from aqueous solutions. Variables of the batch experiments including solution pH, contact time, initial concentration, temperature, calcium and magnesium ions were studied. The results indicated that the adsorption capacities are strongly affected by the solution pH, contact time and initial concentration. A higher pH favors higher U (VI) removal. The adsorption was also affected by temperature and calcium and magnesium ions, but the effect is very weak. The maximum adsorption capacity (q(m)) only increased from 3.36 mgg(-1) to 3.54 mgg(-1) when the temperature was increased from 293 K to 318 K. A two-stage kinetic behavior was observed in the adsorption of uranium (VI): very rapid initial adsorption in a few minutes, followed by a long period of slower uptake. It was found that an increase in temperature resulted in a higher uranium (VI) loading per unit weight of the sorbent. The adsorption of uranium by hematite had good efficiency, and the equilibrium time of adsorbing uranium (VI) was about 6h. The isothermal data were fitted with both Langmuir and Freundlich equations, but the data fitted the former better than the latter. The pseudo-first-order kinetic model, pseudo-second-order kinetic model and intraparticle diffusion model were used to describe the kinetic data, but the pseudo-second-order kinetic model was the best. The thermodynamic parameter Delta G(0) were calculated, the negative Delta G(0) values of uranium (VI) at different temperatures confirmed the adsorption processes were spontaneous.
The mechanism and chemical nature of uranium and thorium sequestration by a Pseudomonas strain was investigated by transmission electron microscopy, energy dispersive X-ray (EDX) analysis, FTIR spectroscopy and X-ray diffractometry. Atomic force microscopy (AFM) used in the tapping mode elucidated the morphological changes in bacterial cells following uranium and thorium binding. Transmission electron microscopy revealed intracellular sequestration of uranium and thorium throughout the cell cytoplasm with electron dense microprecipitations of accumulated metals. Energy dispersive X-ray analysis confirmed the cellular deposition of uranium and thorium. EDX and elemental analysis of sorption solution indicated the binding of uranium and thorium by the bacterial biomass via displacement of cellular potassium and calcium. The strong involvement of cellular phosphate, carboxyl and amide groups in radionuclide binding was ascertained by FTIR spectroscopy. X-ray powder diffraction (XRD) analyses confirmed cellular sequestration of crystalline uranium and thorium phosphates. Overall results indicate that a combined ion-exchange-complexation-microprecipitation mechanism could be involved in uranium and thorium sequestration by this bacterium. Atomic force microscopy and topography analysis revealed an undamaged cell surface with an increase in cell length, width and height following radionuclide accumulation. The arithmetic average roughness (R(a)) and root mean square (RMS) roughness (R(q)) values indicated an increase in surface roughness following uranium and thorium sequestration.
We have evaluated the effects of selected minerals present in subsoil environment on the efficiency of lead removal from contaminated groundwaters using biofilms composed of sulfate-reducing microorganisms, and examined the stability of metal deposits after the biofilms had been temporarily exposed to the air. To quantify the studied effects, lead was immobilized in biofilms of Desulfovibrio desulfuricans grown anaerobically in two flat-plate flow reactors, one filled with hematite and the other with quartz. While the biofilms in both reactors were heterogeneous and consisted of voids and channels, the biofilms grown on hematite were denser, thicker, and more porous than those grown on quartz. The average H2S concentrations, measured using microelectrodes, were higher in the biofilms grown on quartz than those measured in the biofilms grown on hematite. During 18 weeks of operation, iron was continuously released from the hematite. Lead was immobilized more efficiently in the biofilms grown on quartz than it was in the biofilms grown on hematite. Lead deposits were partially reoxidized, especially in biofilms grown on hematite, and the biofilms in both reactors responded to the presence of oxygen by lowering their density and increasing the H2S production rate.
The adsorption of uranyl ion by microorganisms was examined. Among the 76 strains of 69 species tested (23 bacteria, 20 actinomycetes, 18 fungi, and 15 yeasts), high uranyl ion adsorption ability was exhibited by strains of the bacteria, Arthrobacter nicotianae, Bacillus subtilis, and Micrococcus luteus. A. nicotianae cells, which showed the best performance, could adsorb about 698 mg uranyl ion (2.58 mmol) per gram dry wt. of microbial cells. The adsorption of uranyl ion was rapid, selective, and mostly dependent on physico-chemical binding to the cell components. As well as uranyl ion, A. nicotianae could adsorb thorium ion with high efficiency. Cells immobilized with polyacrylamide gel could be used during repeated adsorption-desorption cycles.
A Pseudomonas strain identified as a potent biosorbent of uranium (U) and thorium was immobilized in radiation-induced polyacrylamide matrix for its application in radionuclide containing wastewater treatment. The immobilized biomass exhibited a high U sorption of 202 mg g(-1) dry wt. with its optimum at pH 5.0. A good fit of experimental data to the Freundlich model suggested multilayered uranium binding with an affinity distribution among biomass metal binding sites. Scanning electron microscopy revealed a highly porous nature of the radiation-polymerized beads with bacterial cells mostly entrapped on pore walls. Energy dispersive X-ray analysis (EDXA) coupled with SEM ascertained the accumulation of uranium by the immobilized biomass without any physical damage to the cells. A significant (90%) part of biosorbed uranium was recovered using sodium bicarbonate with the immobilized biomass maintaining their U resorption capacity for multiple sorption-desorption cycles. Uranium loading and elution behavior of immobilized biomass evaluated within a continuous up-flow packed bed columnar reactor showed its effectiveness in removing uranium from low concentration (50 mg U L(-1)) followed by its recovery resulting in a 4-5-fold waste volume reduction. The data suggested the suitability of radiation polymerization in obtaining bacterial beads for metal removal and also the potential of Pseudomonas biomass in treatment of radionuclide containing waste streams.