Article

Analysis of GC-MS from Acetone Extract of Canarium odontophyllum Miq Stem Bark (Dabai)

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Abstract

Canarium odontophyllum or dabai is a natural plant found along the river banks of the Sarikei, Kapit and Kanowit in Sarawak and it comes from the 'Burseraceae' family. C. odontophyllum also known as 'dabai' and this dabai fruit is eaten by the community in Sarawak. The fruit is a seasonal natural fruit that is less used because of its short lifespan. A few studies show that acetone extract of Canarium odontophyllum stem bark (dabai) exhibit antiproliferative and cytotoxicity effect on cancer colorectal cells. However, there is currently no analysis of bioactive compounds in acetone extract of Canarium odontophyllum stem bark (dabai). The various bioactive compounds detected in acetone extract were identified using gas chromatography-mass spectrometry (GC-MS). A total of 24 phytoconstituents were detected in this acetone extract. It was found that major peaks represented bicyclo [3.1.0] hex-2-ene,2-methyl-5-(1-methylethyl)-, bicyclo [3.1.0] hexane,4-methylene-1-(1-methylethyl)-, alpha cubebene, 1H cyclopenta [1,3] cyclopropa [1,2] benzene, octahydro-7-methyl-3-methylene-4-(1-methylethyl)-,[3aS-(3a.alpha., 3b.beta., 4.beta., 7.alpha., 7aS*)]-, phenol,2,4-bis(1,1-dimethylethyl)-, spathulenol, copaene, 9-Eicosene, (E)-, hexadecane, 5-Octadecene, (E)-, hexadecane, 2,6,10,14-tetramethyl-, nonadecane, n-Hexadecanoic acid, heptacosane, 1-chloro-, 9,12-Octadecadienoic acid (Z,Z)-, 9,12-Octadecadienoic acid, ethyl ester, octadecanoic acid, 10-Heneicosene (c,t), heptafluorobutyric acid, hexadecyl ester, dehydroabietic acid, phenol, 2,4-bis(1-phenylethyl)-, beta sitosterol, beta-amyrin and alpha-amyrin. The highest peak area (%) for this acetone extract is alpha-amyrin (16.6644%) followed by beta-amyrin (4.6159%), beta sitosterol (3.3369%) and 9,12-Octadecadienoic acid (Z,Z)- (3.2045%). In conclusion, various bioactive compounds detected in acetone extract of Canarium odontophyllum stem bark (dabai) were demonstrated various medicinal properties while alpha and beta-amyrin may be responsible for the cytotoxicity and apoptotic effect against HCT 116 cell.

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Terpenoid synthases catalyze isoprenoid cyclization reactions underlying the generation of more than 80,000 natural products. Such dramatic chemodiversity belies the fact that these enzymes generally consist of only three domain folds designated as ?, ?, and ?. Catalysis by class I terpenoid synthases occurs exclusively in the ? domain, which is found with ?, ??, ??, and ??? domain architectures. Here, we explore the influence of domain architecture on catalysis by taxadiene synthase from Taxus brevifolia (TbTS, ???), fusicoccadiene synthase from Phomopsis amygdali (PaFS, (??)6), and ophiobolin F synthase from Aspergillus clavatus (AcOS, ??). We show that the cyclization fidelity and catalytic efficiency of the ? domain of TbTS are severely compromised by deletion of the ?? domains; however, retention of the ? domain preserves significant cyclization fidelity. In PaFS, we previously demonstrated that one ? domain similarly influences catalysis by the other ? domain [ Chen , M. , Chou , W. K. W. , Toyomasu , T. , Cane , D. E. , and Christianson , D. W. ( 2016 ) ACS Chem. Biol. 11 , 889 - 899 ]. Here, we show that the hexameric quaternary structure of PaFS enables cluster channeling. We also show that the ? domains of PaFS and AcOS can be swapped so as to make functional chimeric ?? synthases. Notably, both cyclization fidelity and catalytic efficiency are altered in all chimeric synthases. Twelve newly formed and uncharacterized C20 diterpene products and three C25 sesterterpene products are generated by these chimeras. Thus, engineered ??? and ?? terpenoid cyclases promise to generate chemodiversity in the greater family of terpenoid natural products.