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In the high Arctic, plant community species composition generally responds slowly to climate warming, whereas less is known about the community functional trait responses and consequences for ecosystem functioning. The slow species turnover and large distribution ranges of many Arctic plant species suggest a significant role of intraspecific trait variability in functional responses to climate change. Here we compare taxonomic and functional community compositional responses to a long‐term (17‐year) warming experiment in Svalbard, Norway, replicated across three major high Arctic habitats shaped by topography and contrasting snow regimes. We observed taxonomic compositional changes in all plant communities over time. Still, responses to experimental warming were minor and most pronounced in the drier habitats with relatively early snowmelt timing and long growing seasons (Cassiope and Dryas heaths). The habitats were clearly separated in functional trait space, defined by 12 size‐ and leaf economics‐related traits, primarily due to interspecific trait variation. Functional traits also responded to experimental warming, most prominently in the Dryas heath and mostly due to intraspecific trait variation. Leaf area and mass increased and leaf δ¹⁵N decreased in response to the warming treatment. Intraspecific trait variability ranged between 30% and 71% of the total trait variation, reflecting the functional resilience of those communities, dominated by long‐lived plants, due to either phenotypic plasticity or genotypic variation, which most likely underlies the observed resistance of high Arctic vegetation to climate warming. We further explored the consequences of trait variability for ecosystem functioning by measuring peak season CO2 fluxes. Together, environmental, taxonomic, and functional trait variables explained a large proportion of the variation in net ecosystem exchange (NEE), which increased when intraspecific trait variation was accounted for. In contrast, even though ecosystem respiration and gross ecosystem production both increased in response to warming across habitats, they were mainly driven by the direct kinetic impacts of temperature on plant physiology and biochemical processes. Our study shows that long‐term experimental warming has a modest but significant effect on plant community functional trait composition and suggests that intraspecific trait variability is a key feature underlying high Arctic ecosystem resistance to climate warming.
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ARTICLE
Intraspecific trait variability is a key feature
underlying high Arctic plant community resistance
to climate warming
Ingibjörg S. J
onsd
ottir
1,2
| Aud H. Halbritter
3
| Casper T. Christiansen
4,5,6
|
Inge H. J. Althuizen
4
| Siri V. Haugum
3
| Jonathan J. Henn
7,8
|
Katrín Björnsd
ottir
9
| Brian Salvin Maitner
10
| Yadvinder Malhi
11
|
Sean T. Michaletz
12
| Ruben E. Roos
13
| Kari Klanderud
13
|
Hanna Lee
3,14
| Brian J. Enquist
15
| Vigdis Vandvik
3,4
1
Institute of Life and Environmental
Sciences, University of Iceland, Reykjavik,
Iceland
2
University Centre in Svalbard,
Longyearbyen, Norway
3
Department of Biological Sciences,
University of Bergen, Bergen, Norway
4
Bjerknes Centre for Climate Research,
University of Bergen and NORCE
Climate, Bergen, Norway
5
Center for Permafrost (CENPERM),
Department of Geoscience and Natural
Resource Management, University of
Copenhagen, Copenhagen, Denmark
6
Terrestrial Ecology Section, Department
of Biology, University of Copenhagen,
Copenhagen, Denmark
7
Department of Evolution, Ecology, and
Organismal Biology, University of
California Riverside, Riverside,
California, USA
8
Institute of Arctic and Alpine Research,
University of Colorado Boulder, Boulder,
Colorado, USA
9
Department of Biological and
Environmental Sciences, University of
Gothenburg, Gothenburg, Sweden
10
Department of Ecology and
Evolutionary Biology, University of
Connecticut, Storrs, Connecticut, USA
Abstract
In the high Arctic, plant community species composition generally responds
slowly to climate warming, whereas less is known about the community func-
tional trait responses and consequences for ecosystem functioning. The slow
species turnover and large distribution ranges of many Arctic plant species
suggest a significant role of intraspecific trait variability in functional
responses to climate change. Here we compare taxonomic and functional com-
munity compositional responses to a long-term (17-year) warming experiment
in Svalbard, Norway, replicated across three major high Arctic habitats shaped
by topography and contrasting snow regimes. We observed taxonomic compo-
sitional changes in all plant communities over time. Still, responses to experi-
mental warming were minor and most pronounced in the drier habitats with
relatively early snowmelt timing and long growing seasons (Cassiope and
Dryas heaths). The habitats were clearly separated in functional trait space,
defined by 12 size- and leaf economics-related traits, primarily due to interspe-
cific trait variation. Functional traits also responded to experimental warming,
most prominently in the Dryas heath and mostly due to intraspecific trait vari-
ation. Leaf area and mass increased and leaf δ
15
N decreased in response to the
warming treatment. Intraspecific trait variability ranged between 30% and 71%
of the total trait variation, reflecting the functional resilience of those commu-
nities, dominated by long-lived plants, due to either phenotypic plasticity or
genotypic variation, which most likely underlies the observed resistance of
high Arctic vegetation to climate warming. We further explored the conse-
quences of trait variability for ecosystem functioning by measuring peak sea-
son CO
2
fluxes. Together, environmental, taxonomic, and functional trait
Received: 2 March 2022 Revised: 3 August 2022 Accepted: 22 August 2022
DOI: 10.1002/ecm.1555
This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided
the original work is properly cited.
© 2022 The Authors. Ecological Monographs published by Wiley Periodicals LLC on behalf of The Ecological Society of America.
Ecological Monographs. 2023;93:e1555. https://onlinelibrary.wiley.com/r/ecm 1of21
https://doi.org/10.1002/ecm.1555
11
Environmental Change Institute, School
of Geography and the Environment,
University of Oxford, Oxford, UK
12
Department of Botany and Biodiversity
Research Centre, The University of British
Columbia, Vancouver, British Columbia,
Canada
13
Faculty of Environmental Sciences and
Natural Resource Management, Ås,
Norway
14
Department of Biology, Norwegian
University of Science and Technology,
Trondheim, Norway
15
Department of Ecology and
Evolutionary Biology, University of
Arizona, Tucson, Arizona, USA
Correspondence
Vigdis Vandvik
Email: vigdis.vandvik@uib.no
Funding information
Norges Forskningsråd, Grant/Award
Numbers: 274831, 246080/e10, 294948;
Svalbardstiftelsen; The Norwegian Agency
for International Cooperation,
Grant/Award Number: HNP-2015/10037
TraitTrain; University of Iceland
Research Fund; University Centre in
Svalbard
Handling Editor: Daniel C. Laughlin
variables explained a large proportion of the variation in net ecosystem
exchange (NEE), which increased when intraspecific trait variation was
accounted for. In contrast, even though ecosystem respiration and gross eco-
system production both increased in response to warming across habitats, they
were mainly driven by the direct kinetic impacts of temperature on plant phys-
iology and biochemical processes. Our study shows that long-term experimen-
tal warming has a modest but significant effect on plant community functional
trait composition and suggests that intraspecific trait variability is a key feature
underlying high Arctic ecosystem resistance to climate warming.
KEYWORDS
climate change, CO
2
fluxes, community resilience, community resistance, experimental
warming, intraspecific trait variation, plant community change, plant functional traits,
Svalbard
INTRODUCTION
In the rapidly warming Arctic (IPCC, 2021), warming-
induced vegetation changes may mediate tundra
ecosystem functioning (Mekonnen et al., 2021), potentially
with positive climate feedback consequences. In general,
climate warming has stimulated Arctic plant growth in
recent decades, reflected by plant community changes,
increased plant abundance, and taller plants across the
Arctic in local plots (e.g., Bjorkman et al., 2018;
Elmendorf, Henry, Hollister, Björk, Boulanger-Lapointe,
et al., 2012a), as well as at larger scales (Bhatt et al., 2017;
Goetz et al., 2005). However, Arctic plant communities do
not respond evenly to climate warming across the tundra
biome or across habitats within sites (Bhatt et al., 2017;
Bjorkman et al., 2020; Elmendorf, Henry, Hollister,
Björk, Boulanger-Lapointe, et al., 2012a;Myers-Smith
et al., 2020). What drives heterogeneity in warming
responses in the tundra and the consequences of this
variability for ecosystem functioning and resilience to
climate change are not fully understood.
Overall, warming-induced changes in plant com-
munity structure and species composition have been
more prevalent at relatively warm low Arctic sites than
at colder high Arctic sites (e.g., Elmendorf, Henry,
Hollister, Björk, Bjorkman, et al., 2012b;Elmendorf,
Henry, Hollister, Björk, Boulanger-Lapointe,
et al., 2012a). This may seem surprising given the
higher rates of warming in the high Arctic
(IPCC, 2021), but it can be attributed to several
interacting biotic and abiotic factors. The small species
pools in the high Arctic relative to the low Arctic con-
sist of species under more severe life-history constraints
(Arft et al., 1999)thatareadaptedtomoresignificant
interannual climatic variability and shorter growing sea-
sons with longer photoperiods (Hudson & Henry, 2010;
J
onsd
ottir, 2005). At smaller spatial scales, greater plant
community responsiveness has been observed in wet rela-
tive to dry tundra habitats within both low Arctic
(Bjorkman et al., 2020; Elmendorf, Henry, Hollister, Björk,
Boulanger-Lapointe, et al., 2012a) and high Arctic sites
(Edwards & Henry, 2016; Hudson et al., 2011). It is
unknown, however, whether and how the observed resis-
tance of species composition to climate warming in the
high Arctic is associated with responses in plant commu-
nity functional composition.
2of21 JÓNSDÓTTIR ET AL.
Trade-offs limit the extent of variation in functional
traits that affect plant fitness, resulting in relatively few
essential trait combinations (Díaz et al., 2016). Globally,
most of the aboveground trait combinations (i.e., the
functional space) can be captured by two trait dimen-
sions, size (of whole plants as well as their parts) and leaf
economics spectrum, which balance leaf construction
costs against growth potential (Díaz et al., 2016). In turn,
plant functional traits may affect ecosystem carbon
sequestration, litter decomposition, and nutrient cycling
(e.g., Díaz et al., 2004; Sørensen et al., 2019). Although
tundra plant species only occupy a small part of the
global trait space along the size dimension, they demon-
strate almost the full trait variation along the leaf eco-
nomics spectrum. However, this variability also becomes
increasingly constrained toward the colder parts of the
tundra (Thomas et al., 2020).
Recent climate warming of the tundra biome has
been associated with a general shift in Arctic plant
communities toward taller plants. In contrast, the
strength and direction of warming responses of other size
traits and leaf economics are more variable, governed by
local conditions such as soil moisture (Bjorkman
et al., 2018). Less is known about whether and how other
aspects of the Arctic environment influence plant func-
tional trait responses to warming and to what extent
intraspecific trait variation (ITV) contributes to those
responses. For instance, snow regimes in Arctic land-
scapes are strongly shaped by topography, affecting both
growing season length and moisture (Rixen et al., 2022;
Walker, 2000) and may, in turn, affect tundra plant com-
munity diversity and functional responses to warming
(e.g., Niittynen et al., 2020).
To date, most studies of plant functional traits in
tundra systems have relied on species-level trait infor-
mation and so ignore ITV (e.g., Bjorkman et al., 2018;
Kemppinen et al., 2021). ITV can reflect both pheno-
typic plasticity within an individual and genetic differ-
entiation within a population (Albert et al., 2010;
Bolnick et al., 2011), offering two potential mechanisms
for functional responses to environmental change in sys-
tems with limited taxonomic change (i.e., plastic
responses and differential mortality, respectively).
Globally, ITV accounts for around 25% of plant commu-
nity trait variation (Siefert et al., 2015), with an even
more significant relative contribution locally (Messier
et al., 2017;Thomasetal.,2020). In general, ITV should
be relatively more important in communities with low
species richness (Siefert et al., 2015;Thomasetal.,2020)
and in communities dominated by species with broad
environmental niches (Bolnick et al., 2011;Sides
et al., 2014) or high phenotypic plasticity (Albert
et al., 2010). According to the climate variability
hypothesis (Spicer & Gaston, 1999), greater temperature
variability selects organisms with broad thermal toler-
ances. There is evidence that geographic range size is
related to niche breadth (Slatyer et al., 2013). In the high
Arctic, species richness is relatively low, and most plant
species have wide distribution ranges and are adapted to
high seasonal climate variability (e.g., J
onsd
ottir, 2005),
characteristics that predict relatively large ITV.
Furthermore, most Arctic plant species are long-lived
(J
onsd
ottir, 2011), which may slow down species turn-
over in response to climate warming, thereby enhancing
the resistance of plant community species composition
to warming and further increasing the relative impor-
tance of ITV in functional responses.
One of the most critical climate-related services that
permafrost-affected ecosystems provide relates to carbon
storage (IPCC, 2021). Abiotic drivers are usually consid-
ered the primary determinants of the ecosystem functions
associated with this climate feedback property (Schuur
et al., 2015). However, plant functional trait composition
also affects carbon balance. At the individual level, leaf
chemical and structural traits strongly influence
carbon-cycling processes as plants toward the fast-return
end of the leaf economics spectrum produce thin and
nutrient-rich leaves (e.g., leaves with high specific leaf
area [SLA] and N content; Wright et al., 2004) that pro-
mote higher photosynthesis rates (Reich et al., 1997) and
fast decomposition by soil microbes (Funk et al., 2017).
Leaf economics also scales to the community level, where
canopy N and leaf area index correspond well with pri-
mary production rates (Reich et al., 2014). In Arctic tun-
dra, habitats dominated by different plant functional
groups exhibit differences in carbon cycling processes.
Specifically, tall deciduous shrubs accelerate CO
2
exchange and decomposition rates either directly or indi-
rectly through internal ecosystem feedback
(e.g., Christiansen et al., 2018; Kropp et al., 2020;
Lafleur & Humphreys, 2018; Myers-Smith et al., 2011),
suggesting that functional traits should relate well to eco-
system function. Indeed, moving beyond functional
group classifications, recent studies showed that commu-
nity means of leaf economics and plant height affect tun-
dra ecosystems in their ability to fix CO
2
(Happonen
et al., 2022; Sørensen et al., 2018) owing to (1) the
trade-offs associated with being a fastor slowspecies
(Reich, 2014; Wright et al., 2004) and (2) plant height
scaling positively with size and, therefore, photosynthetic
tissue, i.e., leaf area (Lafleur & Humphreys, 2018).
Consequently, climate warminginduced plant commu-
nity changes, leading to tundra plant communities with
taller plants (Bjorkman et al., 2018), will likely cause sig-
nificant shifts in ecosystem properties related to carbon
cycling. These changes should be quantifiable and
ECOLOGICAL MONOGRAPHS 3of21
predictable using functional trait approachesalone or
in concert with environmental drivers (Díaz et al., 2007).
Nevertheless, the utility of functional approaches in
predicting ecosystem responses has recently been
questioned (Funk et al., 2017), and few studies have
investigated the direct effects of functional trait change
and climate warming on tundra CO
2
exchange rates.
This study investigated the functional responses of
high Arctic vegetation to long-term experimental
warming. Specifically, we asked whether and how the
apparent resistance of high Arctic plant communities to
warming was mediated by ITV and to what extent such
trait variability within species has consequences for eco-
system functioning. To address these questions, we ana-
lyzed plant community composition data from a long-term
(17-year) warming experiment replicated across three
major habitats shaped by topography and contrasting
snow regimes in high Arctic Svalbard. In the final year, we
augmented these community data with detailed plot-scale
measurements of 12 size- and leaf economicsrelated plant
functional traits for all vascular plant species present. We
also measured peak-season carbon fluxes in the experi-
mental plots in the final study year to explore the potential
roles of the environment, plant community taxonomy, and
plant functional trait composition in mediating ecosystem
responses to warming.
We hypothesize that (1) in line with other high
Arctic sites, the taxonomic composition of the plant
community does not change, or only weakly changes, in
response to long-term experimental warming. Based on
the foregoing literature review, we further hypothesize
that (2) the plant functional trait composition is affected
by experimental warming and (3) if both 1 and 2 are
true, then we expect most community-level functional
trait responses to experimental warming to be driven by
ITV. Finally, we expect (4) rates of photosynthesis and
respiration to be governed by the realized trait variation
across habitats and climate warming treatments.
Incorporating ITV should thus improve model perfor-
mance and explanatory power for models of ecosystem
carbon fluxes.
METHODS
Study area
Annual temperature (19812000) at Svalbard Airport
(10 km northwest of the experimental site) averaged
4.6C, and annual precipitation averaged 191 mm
(Førland et al., 2011). The linear trend in mean annual
temperature during 18892018 was an increase of 0.32C
per decade and by 1.66C per decade from 1991 to 2018
(Nordli et al., 2020). Similarly, summer temperatures
(JuneAugust) increased by 0.13C per decade during
18892018 and by 0.66 per decade during 19912018. The
experimental site (78110N, 15450E) is situated at the
southsoutheastfacing slope of the Endalen valley at
approximately 80 m above sea level, where distinct habi-
tats are shaped by topography and snow accumulation in
winter. The experiment includes three common Arctic
habitats: a snowbed where deep snow accumulates
(>100 cm) causing late snow melt (on average in
mid-June), a Cassiope heath at intermediate exposure,
snow depth, and snowmelt time, and a more exposed
Dryas heath with only shallow snow (up to 10 cm) and
early snowmelt (on average in mid-May). Consequently,
the growing season duration varies between habitats and
is ~2.5, 3, and 3.5 months in the snowbed, Cassiope, and
Dryas heath, respectively. The soils are typical Cryosols
with a thin organic layer on top of inorganic sediments
(Jones et al., 2010). Soil moisture is related to topography
and increases with snow accumulation in winter.
In the snowbed, total vascular plant cover is low,
characterized by the forb Bistorta vivipara, the deciduous
prostrate dwarf shrub Salix polaris, and the grasses Poa
arctica and Festuca richardsonii. The moss cover is
around 70%, relatively deep (>5 cm), and dominated by
Tomentypnum nitens and Sanionia uncinata. In the
Cassiope heath, the erect evergreen dwarf shrub Cassiope
tetragona dominates. Other abundant vascular plant spe-
cies are S. polaris and B. vivipara, and the most abundant
moss species are T. nitens and S. uncinata. In the Dryas
heath, the evergreen dwarf shrub Dryas octopetala domi-
nates. Other abundant vascular species are Carex
rupestris,B. vivipara, and S. polaris. The moss layer is
well developed but shallower than in the other habitats,
with S. uncinata as the most abundant species.
Experimental design
In 2001, ten 75 75-cm (0.56 m
2
) permanent plots were
established in each of the three habitats. Five plots in
each habitat were randomly assigned to a warming treat-
ment in the following year. The other five served as con-
trols. Climate warming was simulated by the use of
hexagonal Plexiglas open-top chambers (OTCs) (Molau &
Mølgaard, 1996), with a basal diameter of 150 cm
(ca. 1.8 m
2
) and 47 cm in height, leaving ample space
inside the chamber for plant sampling for trait measure-
ments without disturbance to the permanent plot or
risking edge effects. Following rain-on-snow events in
the winter of 20082009, a large proportion of the
Cassiope shrubs were killed by basal ice formation in two
control plots and two OTC plots in the Cassiope heath.
4of21 JÓNSDÓTTIR ET AL.
Such extreme events are interesting aspects of climate
change. Still, since the paper primarily addresses the
effects of experimental warming on the plant communi-
ties, these plots were excluded from all subsequent
analyses.
Environmental variables
Climate data were obtained for the study area during the
last 3 years of the study by an automatic weather station
(HOBO H21-002, Bourne, MA, USA) placed in the
Dryas heath habitat, measuring air temperature (HOBO
S-THB-M008) and photosynthetic radiation (PAR)
(HOBO PAR S-LIA-M003) at 2 m height above ground
and soil water content (HOBO S-SMC-M005) at 5 cm
depth. Surface temperature and soil temperature were
monitored over the year in each plot during two different
time periods using TinyTag Plus data loggers (Gemini
Data Loggers, Chichester, UK) in 20042005 (soil temper-
ature at 10 cm) and iButton data loggers (DS1922L-F5
thermochrons, Maxim Integrated, San Jose, CA, USA)
in 20152018 (soil temperature at 5 cm). Volumetric
soil moisture was obtained from all 30 plots in 2018
with a handheld ML3 ThetaProbe (Delta-T Devices,
Cambridge, UK).
Plant community assessment in taxonomic
space
In all plots, a detailed vegetation analysis using the point
intercept method was performed in 2003, 2009, and 2015,
following standard protocols of the International Tundra
Experiment (Molau & Mølgaard, 1996). We used
100 points per plot and recorded all hits (intercepts)
through the canopy in each point, down to the bryophyte
and lichen layer. If no bryophytes or lichens were pre-
sent, the last hit was litter, biocrust, rock, or soil surface.
Canopy height, including reproductive structures, was
recorded in each point in 2015. Vascular plants were all
recorded to the species level and most of the bryophytes
and lichens (some only identified to genus level).
Plant community assessment in functional
space
We focused on 12 plant functional traits to investigate
plant community responses to warming along the two
main dimensions of the global plant functional trait space
(e.g., Díaz et al., 2016). Three traits reflected plant size
(plant height, leaf dry mass, leaf area), and nine reflected
the leaf economics spectrum (SLA, leaf thickness, leaf
dry matter content [LDMC], nitrogen content [%N], car-
bon content [%C], phosphorus content [%P], carbon:
nitrogen ratio [C:N], nitrogen isotope [δ
15
N], and carbon
isotope ratio [δ
13
C]). The isotope ratios were included
because they may indicate the water status of the plants
(C) and nutrient availability along environmental gradi-
ents (N) (Pérez-Harguindeguy et al., 2013), and both
ratios were therefore expected to respond to the warming
treatment. For each plot, up to three individuals of all
plant species covering more than 1% of the plot were
selected in mid-July 2018. To avoid destructive sampling
within the permanent long-term monitoring plots, the
plant material for trait measurements was collected out-
side these plots but within the much larger OTCs, and in
the surroundings close to each control plot. If more than
three individuals of a species were available, the individ-
uals to be sampled were selected using a randomization
procedure. The height of each sampled plant individual
was measured from the ground to the top of its highest
photosynthetic leaf (standing, unstretched height),
excluding inflorescences. The plants aboveground parts
were then sampled, placed in a ziplock plastic bag,
labeled by plot ID, date, height, taxon, and sample ID,
and transported to the lab. There was no precipitation
during sampling that could complicate subsequent fresh
weight measurements. The samples were stored outdoors
and in the shade (temperature around 6C) to ensure
they stayed water saturated until the measurements
started, within 24 h of collection. The procedure for trait
measurements followed standard trait measurement pro-
tocols (Pérez-Harguindeguy et al., 2013).
Leaves (including petioles and stipules for Dryas
octopetala, if present, but excluding sheaths for
graminoids) were separated from the plants using twee-
zers and scalpels and sorted into paper envelopes with a
standardized labeling system. Since leaf sizes were gener-
ally small and shape varied between plant species within
the study site, standardized rules were applied. For each
plant, up to three healthy and mature leaves were sam-
pled and stored in a separate envelope with a unique
sample ID. If the leaves of a species were tiny (e.g., Dryas
octopetala,Saxifraga oppositifolia,orSalix polaris), sev-
eral leaves equivalent to an area of ~3 cm
2
were collected
for each sample. Fresh, moist leaves were weighed
(in grams, rounded to four decimals; Mettler AE200,
Mettler TOLEDO, and AG204 DeltaRange [0.1 mg preci-
sion]) for wet mass. To estimate leaf area, leaves were
scanned (Canon Lide 220, resolution 300 dpi), and the leaf
area was calculated using ImageJ (Schneider et al., 2012)
and the LeafArea package (Katabuchi, 2015)inRversion
4.0.2. Three measurements of leaf thickness per sample
were taken, when possible, using a digital caliper (Mitutoyo
ECOLOGICAL MONOGRAPHS 5of21
293-348, Neuss, Germany). Measurements on the leaf veins
were avoided, although this was not possible for tiny leaves.
The leaf samples were then dried at 60C to a constant
mass (2428 h) in a drying cupboard (Thermo Scientific
Heraeus, USA) and weighed for dry mass. We calculated
SLA as the leaf area divided by the dry mass (cm
2
/g) and
LDMC as the dry mass divided by the fresh mass (g/g).
Following the size and mass measurements, the
leaves were ground to a powder and analyzed for nutrients
(P, N, C) and isotope ratios (δ
15
N, δ
13
C) at The University
of Arizona. Total phosphorus concentration was deter-
mined using persulfate oxidation followed by the acid
molybdate method (APHA, 1992). Phosphorus concentra-
tion was then measured colorimetrically with a spectro-
photometer (Thermo Scientific Genesys20, Waltham, MA,
USA). Carbon (C), nitrogen (N), and their stable isotope
ratios were measured by the Department of Geosciences
Environmental Isotope Laboratory at the University of
Arizona on a continuous-flow gas-ratio mass spectrometer
(Finnigan Delta PlusXL, Waltham, MA, USA) along with
an elemental analyzer (Costech, Valencia, CA, USA).
Samples of 1.0 0.2 mg were combusted, and standardiza-
tion was based on acetanilide for N and C concentration,
NBS-22 and USGS-24 for δ
13
C, and IAEA-N-1 and
IAEA-N-2 for δ
15
N. The carbon-to-nitrogen ratio (C:N)
was also calculated and analyzed.
Ecosystem CO
2
flux measurements
In mid-July 2018, we measured peak growing season net eco-
system CO
2
exchange (NEE) and ecosystem respiration
(R
eco
) using an infrared gas analyzer (Li-840, LI-COR
Biosciences, Lincoln, NE, USA) connected to a custom-made
Plexiglass chamber (headspace volume =25 L). We used a
polyethylene skirt and a heavy chain to create an airtight seal
between the chamber and the atmosphere. Two fans fitted
within the chamber ensured sufficient air circulation during
measurements. Daytime fluxes were measured twice per
experimental plot, on separate days. For each plot and day,
we measured NEE during ambient light conditions, followed
by thorough aeration of the chamber headspace for 1015 s
before measuring R
eco
by covering the chamber with an
opaque polyethylene cloth. Each flux measurement lasted
for at least 120 s, logging CO
2
concentration values every sec-
ond. During each flux measurement, we collected data on
microclimatic parameters, i.e., soil temperature at 5 cm
depth, canopy temperature, volumetric soil moisture inte-
grated across 010 cm depth, and PAR using handheld ther-
mometers (Fisher Scientific, Oslo, Norway), an infrared
thermometer (Biltema, Åsane, Norway), an ML3 ThetaProbe
(Delta-T Devices, Cambridge, UK), and a Li-190 quantum
sensor (LI-COR Biosciences, Lincoln, NE, USA), respectively.
All measurements were visually inspected before analyses,
and only measurements that showed a consistent linear rela-
tionship between CO
2
and time for at least 60 s were used.
PAR ranged from 493 to 1480 and 211 to 650 μmol photons
m
2
s
1
during the two measurements, respectively. Fluxes
werecalculatedastherateofchangein[CO
2
]overtime
using the following formula (Jasoni et al., 2005):
NEE ¼δCO2
δtPV
RATþ273:15ðÞ
where δCO2
δtis the slope of the CO
2
concentration against
time (μmol mol
1
s
1
), Pis the atmospheric pressure
(kPa), Ris the gas constant (0.008314 kPa m
3
K
1
mol
1
),
Tis the air temperature inside the chamber (C), Vis the
chamber volume (m
3
), and Ais the ground surface
area (m
2
).
Gross ecosystem productivity (GEP) was calculated as
NEE +R
eco
and standardized to PAR =700 μmol pho-
tons m
2
s
1
using a rectangular hyperbolic relationship
(Thornley & Johnson, 1990):
GEP ¼αGEPPAR GEPmax
αGEPPARðÞþGEPmax
where αGEP is the initial slope of the rectangular hyper-
bola, or apparent quantum yield of GEP, and GEP
max
is
the asymptotic maximum GEP at high light intensities.
We used the mean flux rate across measurement days for
each plot in the subsequent statistical analyses.
In addition to our static chamber measurements, we
calculated July (peak growing season) soil respiration
(R
soil
) rates based on data from passive, forced-diffusion
dynamic chambers (Eosense, Dartmouth, Canada) (Risk
et al., 2011), which recorded continuous soil respiration
rates at 4- to 6-h intervals in the Dryas heath during the
20152017 growing seasons (n=3 per treatment). For
each plot, we used the mean July R
soil
flux rate from the
three measurement years in the statistical analyses.
Data analyses
All analyses were done in R version 4.2.1 (R Core
Team, 2021).
Changes in taxonomic composition
To assess the effects of habitat, year, and the warming
treatment on plant taxonomic community composition,
we used principal component analysis (PCA), as
implemented in the rda function in the vegan package
(Oksanen et al., 2020). These analyses were based on
square-root-transformed abundance data, and we tested
6of21 JÓNSDÓTTIR ET AL.
whether community composition varied among treat-
ments, habitats, and years (treatment site year)
using the adonis function. For a more targeted test of the
effect of experimental warming over time, we conducted
PCAs for each habitat separately. This allowed us to
zoom in on the treatmentcontrol contrast over time
(treatment time), which may otherwise be lost in the
much larger compositional differences between habitats
compared to the treatments.
We calculated the change in BrayCurtis distances,
i.e., species compositional differences between plots, and
between the first to last survey from each plot, using the
vegdis function in the vegan package (Oksanen
et al., 2020). We also calculated change in the summed
abundances of all vascular plants; summed abundances
for the functional groups, forbs, graminoids, shrubs,
bryophytes, and lichens; and species richness (number of
species), diversity and species evenness (Shannon diver-
sity/log[richness]) from the first to last surveys. We tested
whether change in these community metrics varied by
treatment and habitat using ANOVA, where the response
was modeled as a function of habitat, treatment, and
their interaction. We also tested whether a change in
habitattreatment combinations differed from zero using
t-tests.
Changes in functional trait composition
and the importance of ITV
To assess inter- and intraspecific trait variability, we cal-
culated the community-weighted mean trait values for
each plot using community species composition data
from 2015 and trait values from 2018. Since community
composition changes over time in this system are slow,
the time difference in collecting the last species commu-
nity data (2015) and trait (2018) data was assumed minor
for the trait analyses. We imputed trait data if any species
present in a plot did not have at least two measurements
for each trait from that plot to be able to generate trait
distributions (see following discussion). For this, we first
used measurements from that species in the same habitat
and treatment, and if that was not available, we used
measurements from any plot in the same habitat to fill in
the trait coverage for the whole community in each plot.
Thus, the majority of trait measurements used in
estimating community trait distributions for a plot came
from traits measured directly in the plot of interest. For
the traits plant height, dry mass, leaf area, thickness,
SLA, and LDMC, 90% of the plots had at least 90% cover-
age at the plot level. For the nutrient-related traits, 75%
of the plots had at least 76.2% coverage at the plot level.
The community trait distribution was generated using a
bootstrapping approach with the R package traitstrap
(Telford et al., 2021) by randomly sampling measured
trait values with replacement for each trait and each spe-
cies from each plot proportional to the abundance of that
species in that plot (Enquist et al., 2015; Wieczynski
et al., 2019). This procedure was repeated 100 times, and
for each repetition we calculated the mean of the trait
distribution for each trait. These 100 trait distribution
means were then averaged to determine each traits over-
all distribution mean in each plot. This approach has the
distinct advantage of allowing us to include intraspecific
variability and the hierarchical structure of the experi-
mental design in our estimates of community trait distri-
butions. For each trait we assessed the differences in trait
means between habitat types and treatments in all cases
using ANOVAs where the community mean trait values
response of interest were modeled as a function of habitat
type, warming treatment, and their interaction.
In parallel to the taxonomic compositional analyses,
we used PCA, as implemented in the rda function in the
vegan package (Oksanen et al., 2020) to assess the effects
of habitat and the warming treatment on plant trait com-
munity composition. We based these analyses on centered
and scaled data and tested whether trait community com-
position varied between habitats and treatments using the
adonis function. For a more targeted test of the effect of
experimental warming, PCA was also done for each habi-
tat separately to zoom in on the treatmentcontrol con-
trast, which could otherwise be lost in the much more
significant differences between habitats compared to the
treatments. The effect of treatment was tested using the
same test as described earlier.
To quantify the relative importance of inter- versus
intraspecific variation in the functional community
response to warming, we compared the plot-level trait
distribution means using the bootstrapping method
described earlier, computed with and without the ITV.
First, measures including ITV, i.e., based on all trait mea-
surements for each species in each plot, were calculated
as described in the preceding section (referred to as the
specific mean). Second, measures excluding ITV were esti-
mated by calculating the average trait value for each spe-
cies across all control plots, and using these values to
calculate community-weighted mean trait values for each
plot, thereby ignoring plot-, habitat-, and treatment-specific
trait variability within species (referred to as the fixed
mean). Differences between the specific (including both
species turnover [i.e., interspecific variation] and ITV), and
fixed (only species turnover) trait means reflect the contri-
bution of ITV to the total observed trait variation across
treatments and habitats. To quantify the contribution of
ITV and species turnover to the variation in community
mean trait values, habitats, and treatments, separate
ECOLOGICAL MONOGRAPHS 7of21
ANOVAs with fixed, specific means and their difference as
response and the interaction of habitat and treatment as
predictor were performed. We then decomposed the sum
of squares from the ANOVAs as described by Lepˇ
setal.
(2011). To test whether the difference between specific and
fixed community-weighted traits in each treatment from
each habitat was different from zero, a t-test was used. We
alsodeterminedtherelativeimportanceofintraspecific
variation versus interspecific variation in traits by
partitioning trait variance into between- and within-species
components using a mixed model where the fixed effect
was only an intercept and a random effect for species inter-
cepts based on methods from Messier et al. (2010)using
the lme (Bates et al., 2015)andvarcomp(Qu,2017)
functions.
Ecosystem CO
2
fluxes
To examine whether taxonomic and functional trait
changes lead to shifts in ecosystem carbon fluxes, we
tested the effect of experimental warming on GEP
700
,
R
eco
, and NEE using general linear models. We specified
treatment and habitat as fixed main effects for all models,
including their interaction term and plot as random
effect. In addition, we used a general mixed-effects model
(lme4 package; Bates et al., 2015) to analyze treatment
effects on our multiyear R
soil
data, with treatment as fixed
main effect and plot as random effect to account for our
repeated measures design.
We investigated the effects of three groups of
variables: (1) environmental (plot-scale microclimate
measurements), (2) taxonomic (plant functional group
abundance [graminoid, forb, bryophyte, evergreen
shrub, deciduous shrub, lichen], evenness, richness,
diversity, canopy height), and (3) plant functional traits
(community-weighted traits including and not including
intraspecific variability: plant height, leaf area, leaf thick-
ness, LDMC, SLA, P, C, N, C:N) on ecosystem carbon
flux (i.e., GEP
700
,R
eco
, and NEE) across habitats and
treatments. We assessed the effect of individual predictor
variables on ecosystem carbon flux using linear models
on scaled predictor variables (Appendix S1: Figure S8).
Next, we constructed multiple linear models for all three
CO
2
flux components (GEP
700
,R
eco
, and NEE) across
habitats and treatments of the different predictor groups
(environment, taxonomic, and plant functional traits),
resulting in a total of nine models. Variables were
selected based on the stepwise backward selection using
the stepAIC function (MASS package; Ripley et al., 2020).
Variables were only excluded if they reduced the Akaike
information criterion (AIC) score by more than 2
(Burnham & Anderson, 2002). The resulting models
represented the overall effects of the three predictor
groups on different ecosystem carbon fluxes. To assess
the effect of ITV on ecosystem carbon fluxes, we com-
pared the three trait models selected by backward selec-
tion including ITV with models containing the same trait
predictors but with ITV excluded from the trait predic-
tors. Last, we combined the three models in one full com-
posite model, consisting of combined environmental,
taxonomic, and trait variables, for each CO
2
flux compo-
nent. This allowed us to assess the overall variation
explained by each group of variables and shared variation
explained across models.
RESULTS
Environmental characteristics
and community structure
There was substantial seasonal and annual
variation in the measured environmental parameters
(Appendix S1: Figure S1A). PAR reached a maximum
(>700 μmol m
2
s
1
) in late June in all measured years.
The monthly mean air temperature (2 m above ground)
was highest in July and ranged between 6.9 0.26C
(in 2017) and 8.7 0.30C (in 2016). Temperature fluctu-
ations were much more extensive during winter than
summer, with a few warm spells (temperature above
0C) each winter (Appendix S1: Figure S1A). At the plot
level, surface mean annual temperatures in control plots
ranged between 1.57 0.96C and 0.03 0.87C
and July temperatures between 9.1 0.54C and
12.0 0.45C across years and habitats, with larger varia-
tion during winter (Appendix S1: Figure S1B). Mean July
soil temperatures were ~3C lower than at the surface,
ranging between 5.8 0.41C and 8.7 0.04C across
years and habitats (Appendix S1: Figure S1B). Owing to
the sporadic data and considerable interannual variation,
it was not possible to detect trends in the timing of snow-
melt or temperature change in the control plots over the
17-year study period.
There was a trend toward increased annual surface
temperature in response to the warming treatment by
1.25C across all years and habitats (F
1,486
=3.5,
p=.062), but not for soil temperature (0.63C higher,
not significant). The warming treatment enhanced
July surface temperatures by, on average, 1.6C across all
years and habitats (F
1,45
=21.0, p< .001) and tended to
increase soil temperature (Appendix S1: Figure S1B). This
trend was also reflected in the July 2018 spot measure-
ments of soil temperature and a reduction in soil moisture
by the warming treatment (significant only in the Dryas
heath, reduction from 15% to 10% volumetric water
8of21 JÓNSDÓTTIR ET AL.
content; Appendix S1: Figure S2). The warming treatment
did not affect surface and soil temperatures in winter.
Canopy height was relatively low but varied among
the habitats. The low vascular plant cover in the snowbed
resulted in low average plot canopy height above the
moss layer (1.1 0.0 cm in 2015, Appendix S1: Figure S3).
The canopy height was highest in the Cassiope heath,
where the erect growing Cassiope tetragona dwarf shrub
dominated (average plot canopy height 1.3 0.1 cm;
Appendix S1: Figure S3), while the dominance of the
prostrate growing Dryas octopetala dwarf shrub resulted
in lower canopy height in the Dryas heath (average
canopy height 1.1 0.0 cm; Appendix S1: Figure S3). The
warming treatment significantly increased canopy height
in the Cassiope and Dryas heaths but not in the snowbed.
Taxonomic compositional change over
time and in response to warming
Plant community species composition differed over habi-
tats, treatments, and time, with significant differences in
treatment effects and temporal dynamics between the hab-
itats (Figure 1a). Most of the variation in community com-
position was found between habitats, which could account
for about two-thirds of the explained variation in the data
(Appendix S1: Table S1). In all habitats, there was a
change over time in plant community species composition
from the first plant community analysis in 2003 to the last
in 2015, both in the ambient controls and treatment plots
(Figure 1bd). Also, there was a significant treatment
effect in the Cassiope and Dryas heaths, mainly reflecting
somewhat more pronounced community shifts over time
in the warmed plots than in the controls (Figure 1c,d).
A few other community metrics were affected by warming,
most strongly in the Dryas heath, where evenness
decreased and total vascular plant and evergreen shrub
abundance increased (Appendix S1: Figure S4).
Functional community compositional
variation and response to warming
The three communities were also well differentiated in
functional trait composition. The snowbed plots occupied
the resource-acquisitive part of the trait space, whereas
the other two communities were characterized by more
resource-conservative trait values and were, in turn, sepa-
rated by size-related traits, the Cassiope heath being char-
acterized by taller plants than the Dryas heath (Figure 2a;
Appendix S1: Table S2). Overall, experimental warming
significantly affected community trait composition
(Appendix S1: Table S2). Plants tended to be taller,
having larger leaves and higher LDMC and carbon con-
tent in the warmed plots, and this trend was most pro-
nounced (but not significant) in the Dryas heath
(Figure 2bd).
In univariate analyses, all measured functional traits
except LDMC and %P differed between habitats
(Appendix S1: Figure S5; Appendix S1: Table S3) and over-
all, habitat type explained between 13% and 80% of the
total variation in individual traits (Appendix S1:
Figure S6). In most cases, this was because the snowbed
differed from the other two habitats, being characterized
by higher values for the traits SLA, dry mass, leaf area, %
N, and δ
15
N, along with lower values for leaf thickness, %
C, and C:N ratio (Figure 2; Appendix S1: Figure S5).
Overall, the warming treatment explained much less of
the trait variation than habitat (Appendix S1: Figure S6).
Warmed plots had consistently higher leaf dry mass and
leaf area and lower δ
15
N than control plots, with the stron-
gest responses in the Dryas heath. The warming treatment
did not significantly affect other traits (Appendix S1:
Figure S5).
Intraspecific trait variability
ITV accounted for between 30% (plant height) and 71%
(%P) of the total trait variation in the whole community
across all habitat types (Appendix S1: Table S4). The trait
variation attributable to the warming treatment or the
interaction between habitat and treatment tended to be
due to intraspecific variation (Appendix S1: Figure S6).
In both control and warmed plots, including the intra-
specific variation shifted the mean community-weighted
values of most traits and habitats (Figure 3). Within the
control plots, ITV significantly increased %N, decreased %
C, and marginally decreased C:N in snowbed controls, and
ITV significantly decreased dry mass, leaf area, and SLA
and tended to reduce %N and δ
15
NandincreasedC:N
(p< 0.1) in Dryas heath controls (Figure 3). Within the
warming plots, ITV contributed to increased dry mass and
leaf area in the snowbed and Dryas heath, and increased
SLA, decreased P%, and decreased δ
15
Nvaluesinwarming
plots in the Dryas heath (Figure 3). Overall, we found that
the importance of ITV (i.e., the effect of including the
intraspecific variation in the trait mean calculations) dif-
fered between warmed and control plots for four traits in
the Dryas heath (Appendix S1: Table S5). The trait mean
increased when ITV was included for dry mass, leaf area,
and SLA, whereas for δ
15
N it decreased under warming
relative to the controls. None of the other traits or habitat
types showed significant differences in the importance of
ITV for the trait mean between warming and control
treatments.
ECOLOGICAL MONOGRAPHS 9of21
FIGURE 1 (a) First two axes of principal component analysis (PCA) of plant community species composition in control plots (open
symbols) and experimentally warmed plots (closed symbols) in the three studied habitats (snowbed, Casiope heath, Dryas heath) over the
years 2003 (large symbols), 2009, and 2015, with the amount of variation explained by each PCA axis indicated. The species with the best fit
(length of vector) are visualized. (bd) First two PCA axes for community species composition change of plots within each habitat.
10 of 21 JÓNSDÓTTIR ET AL.
FIGURE 2 Legend on next page.
ECOLOGICAL MONOGRAPHS 11 of 21
Habitat and warming effects on ecosystem
CO
2
fluxes
Peak growing season GEP
700
and R
eco
tended to differ
between the habitats (Appendix S1: Figure S7). Fluxes
measured from the Dryas heath were generally greater
than fluxes in the snowbed, whereas fluxes within the
Cassiope heath were intermediate between the snowbed
and the Dryas heath (Appendix S1: Table S6, Figure S7).
In contrast, NEE rates were similar between the Dryas
heath and the snowbed. Both habitats were net sources
of CO
2
to the atmosphere during our daytime measure-
ments, whereas the Cassiope heath was neither a sink
nor a source (i.e., NEE was not different from 0). Across
all habitats, experimental warming increased peak grow-
ing season R
eco
and, similarly, the warming treatment
enhanced July R
soil
within the Dryas heath (Appendix S1:
Table S6, Figure S7). There was also a significant effect of
the warming treatment on GEP
700
, but this effect was
driven primarily by a strong positive response within the
Cassiope heath (significant treatment habitat interac-
tion; Appendix S1: Table S6) and negligible change across
treatments within the other two habitats.
Effects of microclimate, taxonomic
composition, and functional trait
composition on ecosystem CO
2
fluxes
Ecosystem CO
2
fluxes were related, to different degrees,
to single variables representing the environmental, taxo-
nomic, and functional trait variable groups. Specifically,
whereas GEP
700
was affected by a multitude of different
taxonomic and functional trait variables, fewer single var-
iables significantly affected R
eco
and NEE (Appendix S1:
Figure S8). Surprisingly, the fixed and specific
(i.e., including ITV) versions of the functional trait vari-
ables often differed significantly both in the magnitude
and direction of their single trait effects on ecosystem
CO
2
fluxes (Appendix S1: Figure S8). Nevertheless, more
consistent trait patterns emerged when models were
constructed that included the impact of all environmen-
tal (microclimate), taxonomic, and plant functional trait
variables (Appendix S1: Table S7). For GEP
700
, environ-
mental and taxonomic variables accounted for more than
half of the explained variation, with canopy temperature,
canopy height, and leaf N variables retained in the final
model (Appendix S1: Table S7; Figure 4a,b). For R
eco
, the
variance that can be explained by environmental, taxo-
nomic, or functional trait variables (i.e., shared variance
due to the collinearity of these groups of predictors) dom-
inate (Figure 4a,b). Therefore, canopy temperature, plant
species diversity, and traits associated with both leaf eco-
nomics and plant size were retained in the final model
(Appendix S1: Table S7). For R
eco
, environmental vari-
ables alone explained more variance than taxonomic or
functional trait variables alone, although not by much
(Appendix S1: Table S7). In contrast, for NEE, the
resource acquisition-related traits, leaf area, and plant
height were clearly the most important group of explana-
tory variables (Appendix S1: Table S7; Figure 4a,b). All
three flux components retained some analog of tempera-
ture, plant size, and leaf economics variables in their
final models.
Including ITV enhanced the explanatory power of
traits for all ecosystem CO
2
fluxes, especially for GEP
700
and R
eco
(Figure 4c; Appendix S1: Table S7). For NEE,
including ITV also increased the total variance explained
by microclimate, taxonomic community, or functional
traits, whereas for GEP
700
and R
eco
it did not change sub-
stantially (Figure 4b vs. a). Negative covariance was rela-
tively minor for the three combined models.
DISCUSSION
Community species composition changed over time in all
three habitats. Although species compositional responses
to long-term experimental warming were found in two
habitats, the effects were minor relative to the overall
habitat and temporal variability. Plant community
functional trait composition was modestly affected by
the warming treatment, detected in three out of 12 traits
and mainly in one of the habitats. The trait responses to
warming were primarily driven by intraspecific trait
variability. Both peak season rates of photosynthesis
(GEP
700
) and respiration (R
eco
) increased in response to
the warming treatment across habitats. Together, envi-
ronmental, taxonomic, and functional trait variables
explained a large proportion of the total variation in peak
season CO
2
fluxes, and this proportion increased when
ITV was accounted for.
FIGURE 2 (a) First two axes of principal component analysis (PCA) of plotscale plant community functional trait composition
(i.e., community-weighted trait means) of plots in different habitats (snowbed, Cassiope heath, Dryas heath) and treatments (control,
warming) with the amount of variation explained by each PCA axis indicated. Colored points indicate habitat type; point shape indicates
treatment type. Vectors indicate how traits are related to the first two axes and are labeled by the trait they represent. (bd) First two PCA
axes for functional composition of plots within each habitat.
12 of 21 JÓNSDÓTTIR ET AL.
Plant community change over time
in taxonomic space and effects of warming
The change in taxonomic plant community composition in
the ambient control plots over the study period reflected
both directional response to recent climate warming in
Svalbard (Nordli et al., 2020) and dynamic plant community
responses to the much more significant climatic interannual
variability. Similar to other long-term studies from high
Arctic regions (Hollister et al., 2015;Hudson&Henry,2009;
Hudson & Henry, 2010), the directional changes were slow
in comparison with dynamic temporal changes (e.g., van der
Wal & Stien, 2014) and compared with community changes
found in warmer parts of the tundra (Elmendorf, Henry,
Hollister, Björk, Boulanger-Lapointe, et al., 2012a). Two
resurvey studies in central Svalbard after 70 and 85 years
also reported no directional changes or indications of
greeningin response to ongoing climate change (Kapfer &
Grytnes, 2017;Prachetal.,2010).
The warming treatment only slightly modified species
compositional changes, and these effects were confined
to the Cassiope and Dryas heaths, our driest habitats,
where the abundance of evergreen shrubs increased.
This contrasts with earlier studies that found the
strongest responses in moist habitats (Edwards &
Henry, 2016; Elmendorf, Henry, Hollister, Björk,
Bjorkman, et al., 2012b). Furthermore, the commonly
detected decrease in soil moisture in response to the OTC
treatment (e.g., Bokhorst et al., 2013) was only found in
the Dryas heath, suggesting an environmental factor that
overrides soil moisture limitation. In Arctic landscapes,
topography determines snow accumulation and hydrol-
ogy (Walker, 2000) and, thus, the length of the growing
season, which is particularly critical in the high Arctic.
The early snowmelt in the Dryas heath resulted in a
1.4 times longer growing season, on average, compared
to the late-melting, moist snowbed, allowing a longer
cumulative response time to the warming treatment,
FIGURE 3 Contribution of intraspecific trait variation (ITV) to trait variation calculated as difference between mean community
functional trait distributions with (specific average) and without (fixed average) ITV in different habitats and treatments (control, warming).
The zero line indicates that ITV did not change the community trait distribution mean value, whereas positive values indicate that ITV
increased the community trait distribution mean, and negative values indicate that ITV decreased the community trait distribution mean.
Asterisks above each habitat and treatment combination indicate whether the mean difference is different from zero (t-test).
+
p< 0.1; *p< 0.05.
ECOLOGICAL MONOGRAPHS 13 of 21
which may explain why we saw the most significant
responses within this habitat.
Several factors might contribute to the resistance of
the plant community composition to both ambient and
long-term experimental warming in the high Arctic.
First, high Arctic regions are characterized by small spe-
cies pools, often substantial dispersal barriers, which
may delay the migration of more thermophilic and
FIGURE 4 Variance of ecosystem function, i.e., peak growing season GEP
700
,R
eco
, and net ecosystem exchange flux rates, across
habitats and treatments explained by three groups of variables: (1) environmental (plot-scale microclimate measurements), (2) taxonomic
(plant functional group abundance [graminoid, forb, bryophyte, evergreen shrub, deciduous shrub, lichen], evenness, richness, diversity,
canopy height), and (3) plant functional traits (community weighted traits with and without including intraspecific trait variability: plant
height, leaf area, leaf thickness, leaf dry matter content, specific leaf area, P, C, N, C:N). (a) Variance explained by unique and combined
group effects excluding intraspecific trait variation (ITV). (b) Variance explained by unique and combined group effects including ITV. (c)
Variance explained by plant functional traits with and without ITV (gray +black and gray bars, respectively). Note that negative values can
occur when combining two groups in a model that explains less of the variation than the individual groups.
14 of 21 JÓNSDÓTTIR ET AL.
responsive species, as illustrated by the substantial lagged
responses to climate in their subsequent establishment
into the plant communities observed throughout the
Arctic (Elmendorf et al., 2015). Second, most Arctic
plant species are long-lived, and many rely on various
forms of clonal growth for population maintenance
(e.g., J
onsd
ottir, 2011), enhancing their ability to persist
in the face of environmental change. Third, the plants
are adapted to sizeable interannual climate variability,
and it may take substantial, long-term warming to push
the system beyond that variability range (e.g., Hudson &
Henry, 2010;J
onsd
ottir, 2005). For example, in our study,
the 3C variability range for surface mean July tempera-
tures across study years exceeded the 1.6C experimental
temperature increase. However, the severe damage
caused by basal ice formation in some of the Cassiope
heath plots during our study indicates that increased fre-
quency of extreme events might accelerate community
changes in the high Arctic. Finally, as suggested by our
results, plant functional trait variation, particularly ITV,
may substantially enhance community functional resil-
ience by enabling plastic responses by individuals
(as demonstrated by dynamic community vegetation
responses to interannual climate variability) or adapta-
tion to long-term warming, thereby retaining fitness
within populations.
Community variation in functional space
and effects of warming
The first two axes of the plant community-weighted func-
tional trait space of our results primarily reflected the
two global dimensions of leaf economics spectrum and
plant size, respectively (Bruelheide et al., 2018; Díaz
et al., 2016), albeit with reduced trait ranges, particularly
for size traits, comparable to the extremetundra plants
in a study by Thomas et al. (2020). Snowbeds were char-
acterized by resource-acquisitive traits, whereas the
Dryas and Cassiope heaths were characterized by
resource-conservative traits, and were again separated by
traits related to size and carbon dynamics.
Community functional trait composition responded
to experimental warming and involved increased values
of two size-related traits, leaf area and leaf dry mass,
and decreased δ
15
N, with the strongest responses in the
Dryas heath. This partly contradicts previous studies,
where leaf area decreased with warmer temperatures at
dry sites but increased with warming at moist sites
(Bjorkman et al., 2018). Furthermore, plant height did
not respond to warming, again contradicting other tun-
dra studies on individual and community levels (Baruah
et al., 2017;Bjorkmanetal.,2018;Hollisteretal.,2015;
Hudson et al., 2011). The inherently low stature of most
highArcticplantsmaybeanadaptationtotheharshcli-
mate. Such constraining adaptation in combination with
slow within-habitat species and genotype turnover may
explain this lack of community plant height response
and why size responses to experimental warming were
expressed by leaf traits (increased leaf area and dry
mass) rather than by increased plant height in this high
Arctic community.
The significant decrease in community foliar δ
15
Nin
response to warming contradicts shoot-level results for
five plant species at a high Arctic site in Canada, where
no warming responses were found (Hudson et al., 2011).
An increase in δ
15
N has been observed in relation to
N-availability gradients (Craine et al., 2015) and has also
been positively related to mean annual temperature and
precipitation (Amundson et al., 2003). It is possible that
the decrease in this trait along the snowmoisture gradi-
ent of our study, from relatively high in the snowbed to
lower levels in the Dryas heath, signals such an
N-availability gradient. Experimental warming generally
increases N-mineralization rates in cold regions (Salazar
et al., 2020), and we would therefore expect an increase
in leaf δ
15
N in response to warming. However, the oppo-
site happened in the Dryas heath. The decrease in soil
moisture may have played a role. Still, such general
trends may also be modulated by other functional traits
of the responding species at a local scale, in this case by
increased input of recalcitrant litter by the abundant
evergreen dwarf shrub Dryas octopetala. Indeed, Vowles
and Björk (2019) suggested that, in contrast to the accel-
erating impact of expanding deciduous shrubs on ecosys-
tem processes in response to climate warming, such as
rates of N mineralization (Mekonnen et al., 2021;
Myers-Smith et al., 2015), expanding evergreen shrubs
will decelerate ecosystem processes through their low
nutrient and recalcitrant litter, thereby counteracting
the direct effects of warming on those processes
(e.g., Cornelissen et al., 2007).
It has been suggested that the frequently observed
drop in leaf nutrient levels in response to short-term
experimental warming (25 years; e.g., Doiron
et al., 2014; Tolvanen & Henry, 2001) will level out in the
long term as increased soil N mineralization satisfies
plant nutrient demand (Michelsen et al., 2012). The lack
of leaf nutrient responses to warming in our study is con-
sistent with other long-term warming experiments in the
high Arctic (Hudson et al., 2011) and more likely reflects
either no direct warming impacts on soil N
mineralization or an indirect decelerating impact by
increased input of recalcitrant litter, or a combination
of these. This is supported by a recent study showing
no effects of long-term experimental warming on
ECOLOGICAL MONOGRAPHS 15 of 21
decomposition rates within our Svalbard communities
(Björnsd
ottir et al., 2022).
The role of ITV
The contribution of ITV to the total community-level trait
variation in our study, ranging between 30% and 71% for
different traits, was relatively large compared to both
global and tundra averages (Siefert et al., 2015; Thomas
et al., 2020). This supports the general expectation that
intraspecific variation should be relatively significant in
species-poor regions (Siefert et al., 2015) and harsh envi-
ronments (Niu et al., 2020).
It is usually assumed that a large ITV reflects a greater
ability of organisms to exist along broad environmental gra-
dients (large niche breadth) and to adjust to environmental
changes (Sides et al., 2014). In all the habitats of our
study, the most dominating plant species have relatively
large geographic ranges and are apparently adapted to
sizeable interannual climate variability (J
onsd
ottir, 2005).
Accordingly, high intraspecific variability in size-related
traits may contribute to dynamic annual variation in above-
ground plant biomass, as has been observed in Svalbard
plant communities in response to interannual variability in
summer temperatures (Petit Bon, 2020; van der Wal &
Stien, 2014), enhancing plant community resilience to cli-
mate variability.
Although the overall community functional trait
response to the long-term warming treatment of our
study was modest and confined to three of the 12 mea-
sured functional traits, it was primarily explained by ITV.
This supports our hypothesis that the plant community
responses to long-term warming in functional space are
mainly driven by intraspecific variation in traits. These
results indicate that studies that rely solely on changes in
taxonomic composition or community-weighted means
that do not incorporate intraspecific variation are likely
underestimating the effects of warming. Leaf size traits
measured at the individual level have been reported as
responsive to warming experiments for a range of Arctic
species (Baruah et al., 2017; Hudson et al., 2011), indicat-
ing plasticity. A transplant experiment in China revealed
a high relative plasticity in leaf δ
15
N among alpine plants
(Henn et al., 2018). That was most likely also the case for
this trait in the predominantly long-lived clonal plants in
response to warming at our Svalbard site.
Effects of warming and functional traits on
peak season ecosystem CO
2
fluxes
Apart from the Cassiope heath, the studied habitats
appeared to be net sources of atmospheric CO
2
at peak
growing season under ambient temperatures, as is often
observed in high Arctic regions (Christiansen et al., 2012;
Welker et al., 2004). Experimental warming increased
GEP
700
and R
eco
, resulting in negligible overall changes
to net ecosystem CO
2
balance, NEE. As there was rela-
tively little warming-induced change in the plant com-
munity in either taxonomic or functional trait space, we
attribute the largely offsetting warming responses in
GEP
700
and R
eco
to the direct kinetic impact of tempera-
ture on plant and soil microbial physiological activities.
Although our flux measurements were obtained over just
two measurement days, and the limited sample size
therefore warrants caution, the observed flux responses
are similar to reports from more flux-focused studies in
high Arctic Canada and Greenland (Lupascu et al., 2014;
Marchand et al., 2004; Welker et al., 2004). Therefore, we
believe our flux data adequately reflect the relative
importance of environmental, plant taxonomic, and
functional trait variables on CO
2
exchange rates,
i.e., ecosystem functionality, across habitats during this
critical time for annual plant-carbon uptake.
Overall, the largest proportion of the variation in
GEP
700
and R
eco
that was uniquely attributed to only one
group of variables, i.e., variation not shared between
groups, was accounted for by the environment (canopy
temperature). This likely reflects the short response time
by the main mechanisms responsible for these CO
2
fluxes. Nevertheless, variables belonging to the taxo-
nomic and functional trait groups also explained consid-
erable variation, either alone or as the shared variance
between two or more variable groups. For example, can-
opy height or the size-related traits of plant height and
leaf area, as well as the leaf economics trait leaf N con-
tent (Wright et al., 2004), consistently remained in the
final, reduced models for GEP
700
and R
eco
, reflecting the
importance of these traits for ecosystem CO
2
exchange
(Reich et al., 1997).
Overall, all three variable groups accounted for
broadly similar amounts of variation in GEP
700
and R
eco
rates (R
2
range across individual groups alone =0.20.37),
although with functional traits situated at the lower end
(functional trait group R
2
=0.20.25, when including
ITV). In contrast, plant functional traits uniquely
explained a large proportion of the overall variation in
NEE (>40%), primarily driven by productivity-related
traits, plant height, leaf area, and leaf N. The explanatory
power of our combined group models was moderate to
high (R
2
range across the three flux components, GEP
700
,
R
eco
, and NEE: 0.40.55), which is similar to or greater
than models from two recent subarctic tundra studies also
attempting to link traits to ecosystem CO
2
exchange rates
(Happonen et al., 2022; Sørensen et al., 2018). Although
studies that relate functional community composition
directly to measures of ecosystem function have generally
16 of 21 JÓNSDÓTTIR ET AL.
been lacking (Funk et al., 2017), an increasing number of
studies report strong effects of community-scaled traits on
ecosystem properties (Grigulis et al., 2013;Reich
et al., 2014). However, even if not all ecosystem properties
are explained well by functional community composition
(van der Plas et al., 2020), plant-related ecosystem func-
tions, such as carbon-cycling processes, consistently show
at least moderate and often good relationships (Funk
et al., 2017; Happonen et al., 2022;Reichetal.,2014;van
der Plas et al., 2020; this study). In addition, for all three
CO
2
flux components, we consistently found that a more
significant proportion of the variance explained by the
functional traits variable group alone was accounted for
when ITV was included. Thus, variability in size and leaf
economics traitsi.e., the functional traits that constrain
the two primary dimensions along which most individual
and community trait assembly occurs (Bruelheide
et al., 2018;Díazetal.,2016)is an essential component
in determining community functionality at our high
Arctic site. Similarly, Happonen et al. (2022) found posi-
tive relationships between subarctic tundra CO
2
fluxes and
within-community variability in SLA and LDMC (but not
for plant height), suggesting that increasing functional
diversity is linked to ecosystem functionality (Cadotte
et al., 2011). Adding to this, we found that the total
explained variance in our final, reduced NEE model
increased when including ITV, indicating an effect of trait
plasticity on ecosystem carbon balance. Taken together,
these relatively straightforward effects of including trait
variation within species fit well with recent studies show-
ing that intraspecific variation in traits repeatedly impacts
ecosystem functionality at least as much as species turn-
over effects (e.g., Des Roches et al., 2018).
Although our analyses of the ecosystem CO
2
fluxes
shed new light on how plant functional traits and espe-
cially ITV can affect ecosystem functioning, we also note
that ecosystem CO
2
fluxes are highly variable in time and
space. Consequently, more extensive flux measurements
are required to capture the ecosystem characteristics.
Nevertheless, we show similar linkages, and explanatory
power, between tundra plant functional composition
and ecosystem CO
2
fluxes as other studies with more
flux measurements (Happonen et al., 2022; Sørensen
et al., 2019), and so our study adds to the evidence that
traitfunctionality relationships, at least regarding CO
2
exchange rates, exist and are consistent across tundra
habitats and sites.
CONCLUSIONS
Our study provides new insights into the impacts of cli-
mate warming on plant communities across high Arctic
tundra landscapes and the role of plant functional trait
variation on community resilience and ecosystem func-
tioning. The studied plant communities were strongly dif-
ferentiated among habitats in taxonomic and trait
composition and showed a modest but significant func-
tional response to experimental warming. Consequently,
functional trait variation explained considerable variation
in ecosystem CO
2
exchange rates, broadly similar in mag-
nitude to environmental and taxonomic variables.
However, warming responses in CO
2
fluxes were mainly
driven by the direct kinetic impacts of temperature on
plant physiology and biochemical processes. The results
also provide evidence that ITV adds to community func-
tional resilience, which plays a vital role in vegetation
resistance to climate warming in high Arctic Svalbard.
Here we have focused on climate warming impacts in
relation to habitat differences in snow regimes. It is
likely, however, that, combined with other aspects of
predicted climate change, such as changes in precipita-
tion and snow accumulation and increased frequency of
extreme events, for instance, rain on snow, climate
change impacts will eventually exceed community resil-
ience in some habitats and cause substantial community
shifts in the future with consequences for ecosystem
functioning. Finally, as climate warms, the immigration
of more thermophilic and responsive plant species may
eventually facilitate faster community change.
AUTHOR CONTRIBUTIONS
Following the CreDiT taxonomy (https://casrai.org/credit/
[2019]) the author contributions are as follows:
Conceptualization: Ingibjörg S. J
onsd
ottir, Kari Klanderud,
Hanna Lee, Brian J. Enquist, and Vigdis Vandvik. Data
curation: Aud H. Halbritter, Inge H. J. Althuizen, Casper
T. Christiansen, Jonathan J. Henn, and Siri V. Haugum.
Formal analysis: Aud H. Halbritter, Jonathan J. Henn, Inge
H. J. Althuizen, Casper T. Christiansen, and Siri
V. Haugum. Funding acquisition: Ingibjörg S. J
onsd
ottir
and Vigdis Vandvik. Investigation: all authors.
Methodology: Ingibjörg S. J
onsd
ottir, Aud H. Halbritter,
Kari Klanderud, Hanna Lee, Brian Salvin Maitner, Brian
J. Enquist, and Vigdis Vandvik. Project administration:
Ingibjörg S. J
onsd
ottir, Aud H. Halbritter, and Vigdis
Vandvik. Resources: Ingibjörg S. J
onsd
ottir, Aud
H. Halbritter, Kari Klanderud, Hanna Lee, Brian Salvin
Maitner, Brian J. Enquist, and Vigdis Vandvik. Supervision:
Ingibjörg S. J
onsd
ottir, Inge H. J. Althuizen, Katrín
Björnsd
ottir, Casper T. Christiansen, Aud H. Halbritter,
Jonathan J. Henn, Siri V. Haugum, Brian Salvin Maitner,
Sean T. Michaletz, Ruben E. Roos, Kari Klanderud, Hanna
Lee, Yadvinder Malhi, and Vigdis Vandvik. Validation: Aud
H. Halbritter. Visualization: Aud H. Halbritter, Inge H. J.
Althuizen, Casper T. Christiansen, Jonathan J. Henn, and
ECOLOGICAL MONOGRAPHS 17 of 21
Siri V. Haugum. Writingoriginal draft preparation:
Ingibjörg S. J
onsd
ottir, Kari Klanderud, Hanna Lee, and
Vigdis Vandvik. Writingreview and editing: all authors.
Authorship order reflects author contributions, with alpha-
betical order within groups of equivalent authors, and with
Brian J. Enquist and Vigdis Vandvik as senior authors.
ACKNOWLEDGMENTS
Inger Moe, ´
Asta Eyth
orsd
ottir, Linda ´
Arsælsd
ottir (L ´
A),
Martin A. Mörsdorf, and ´
Agústa Helgad
ottir assisted with
plant community composition measurements. Students
in the 2018 course 19 Plant Functional Traitsin
Svalbard (PFTC4-Team)Polly Bass, Lucely Lucero
Vilca Bustamante, Adam Chmurzynski, Shuli Chen, Julia
Kemppinen, Kai Lepley, Yaoqi Li, Mary Linabury, Ilaíne
Silveira Matos, Barbara M. Neto-Bradley, Molly Ng,
Pekka Niittynen, Silje Östman, Karolína P
ankov
a, Nina
Roth, Matiss Castorena Salaks, Marcus Spiegel, Eleanor
Thomson, and Alexander Sæle Vågenesassisted in
collecting and processing samples for plant functional
trait values, and Chirstine Schirmir assisted with organiz-
ing and analyzing the plant nutrient data. The study was
funded by the University Centre in Svalbard (Ingibjörg
S. J
onsd
ottir), University of Iceland Research Fund (2015,
Ingibjörg S. J
onsd
ottir), Svalbardstiftelsen (2009,
Ingibjörg S. J
onsd
ottir), Research Council of Norway
No. 246080/E10 (L ´
A) and No. 294948 (Hanna Lee, Inge
H. J. Althuizen), HNP-2015/10037 TraitTrain,and
INTPART Project 274831 RECITE,from the
Norwegian Agency for International Cooperation (Vigdis
Vandvik) and Quality Enhancement in Higher Education
(DIKU) (Vigdis Vandvik). We are grateful to Haydn
Thomas, an anonymous reviewer, and the editor for con-
structive comments on the manuscript.
CONFLICT OF INTEREST
The authors declare no conflict of interest.
DATA AVAILABILITY STATEMENT
Data (Halbritter et al., 2022) are available in the Open
Science Framework repository at https://doi.org/10.17605/
OSF.IO/SMBQH. Code (Halbritter, 2022)isavailablein
Zenodo at https://doi.org/10.5281/zenodo.7052598.
ORCID
Ingibjörg S. J
onsd
ottir https://orcid.org/0000-0003-
3804-7077
Aud H. Halbritter https://orcid.org/0000-0003-2597-
6328
Jonathan J. Henn https://orcid.org/0000-0003-1551-
9238
Sean T. Michaletz https://orcid.org/0000-0003-2158-
6525
Ruben E. Roos https://orcid.org/0000-0002-1580-6424
Kari Klanderud https://orcid.org/0000-0003-1049-7025
Vigdis Vandvik https://orcid.org/0000-0003-4651-4798
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SUPPORTING INFORMATION
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in the Supporting Information section at the end of this
article.
How to cite this article: J
onsd
ottir, Ingibjörg S.,
Aud H. Halbritter, Casper T. Christiansen, Inge
H. J. Althuizen, Siri V. Haugum, Jonathan J. Henn,
Katrín Björnsd
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Variability is a Key Feature Underlying High
Arctic Plant Community Resistance to Climate
Warming.Ecological Monographs 93(1): e1555.
https://doi.org/10.1002/ecm.1555
ECOLOGICAL MONOGRAPHS 21 of 21
... including changes in species identity and relative abundance) and/or trait variation within species (Violle et al., 2012). Generally, about one quarter of total plant trait variation is attributed to intraspecific variation, but this can exceed 50% for some leaf economic traits, such as leaf nitrogen content (Jónsdóttir et al., 2022;Siefert et al., 2015;Thomas et al., 2020). ...
... For species-poor, High Arctic plant communities, intraspecific trait variation is relatively more important, and this may explain the high ecological resilience of these systems whereby taxonomic community composition persists and maintains functioning even under rapidly increasing temperatures (Jónsdóttir et al., 2022). Although marine-derived nutrients from seabirds alter individual Arctic plant species traits (Wojciechowska et al., 2015;Zmudczyńska-Skarbek et al., 2015) and increase the productivity of terrestrial vegetation (González-Bergonzoni et al., 2017), there is a need for studies that address functional responses of Arctic plants to marine-derived nutrient inputs at the community level. ...
... Intraspecific variation in the sampled plant communities was relatively high compared with global values (Siefert et al., 2015), yet comparable to other studies in Svalbard (Jónsdóttir et al., 2022). ...
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Low temperatures and nutrient limitation have shaped Arctic plant communities, which are now affected by biome‐wise changes in both climate and nutrient cycling. Rising temperatures are favouring taller plant species with more resource‐acquisitive traits across the Arctic tundra. Simultaneously, declines in seabird populations may reduce subsidies of marine‐derived nutrients to terrestrial ecosystems, potentially favouring more resource‐conservative plant traits. It is crucial to understand the consequences of these concurrent changes in climate and marine‐derived nutrient inputs from seabirds for the functional composition and roles of Arctic plant communities. We use a 'space‐for‐time approach' to compare the functional composition of vascular plant communities across two elevational gradients in High Arctic Svalbard, one where climate is the major environmental driver and one influenced by nutrient input from a seabird colony. We assess changes in 13 traits related to plant size, leaf economics and nutrient cycling along the two gradients, and we also explore the relative contributions of species turnover and intraspecific variation to total trait variation across and between the gradients. Elevation per se had little impact on the plant functional composition. Instead, plants at the top of the seabird nutrient gradient, closest to the nesting sites, were taller and had resource‐acquisitive trait values, such as larger and thicker leaves and higher leaf nutrient contents. Enriched soil δ¹⁵N‰ signatures at these sites correlated with resource‐acquisitive values of leaf area, specific leaf area, leaf dry matter content, leaf phosphorous content and with enriched leaf δ¹⁵N‰ signatures. This variation in leaf economic traits and isotopes was largely driven by intraspecific variation at the nutrient gradient, whereas species turnover dominated at the reference gradient. Our results are consistent with marine‐derived nutrient subsidies from seabirds being a major driver of functional trait variation in Arctic vegetation. Ongoing declines in seabird populations may therefore affect terrestrial primary producer communities in the Arctic and beyond, with potentially important but unknown implications for biodiversity, consumer and decomposer communities, and ecosystem processes. Read the free Plain Language Summary for this article on the Journal blog.
... We use all trait measurements (regardless of habitat type and experiment where they come from) to calculate an average value per species based on measurements from at least five individuals per species collected across a range of habitats where each species occurs. We acknowledge that various forms of intraspecific variation can be large and influence species responses to change (Henn et al. 2018;Jónsdóttir et al. 2023). However, it was not feasible to measure relevant intraspecific variation related to the effects of these experiments because we did not have measurements from treatment plots and many of the experiments analysed here have been discontinued. ...
... across our experiments while D. cespitosa showed consistent increases ( Figure 5). Increasing plant height is a trend also seen across the tundra more broadly including Arctic and alpine systems (Bjorkman et al. 2018;Jónsdóttir et al. 2023). However, the trend towards higher SLA was only seen in wet tundra communities globally (Bjorkman et al. 2018). ...
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Forecasting plant responses under global change is a critical but challenging endeavour. Despite seemingly idiosyncratic responses of species to global change, greater generalisation of ‘winners’ and ‘losers’ may emerge from considering how species functional traits influence responses and how these responses scale to the community level. Here, we synthesised six long‐term global change experiments combined with locally measured functional traits. We quantified the change in abundance and probability of establishment through time for 70 alpine plant species and then assessed if leaf and stature traits were predictive of species and community responses across nitrogen addition, snow addition and warming treatments. Overall, we found that plants with more resource‐acquisitive trait strategies increased in abundance but each global change factor was related to different functional strategies. Nitrogen addition favoured species with lower leaf nitrogen, snow addition favoured species with cheaply constructed leaves and warming showed few consistent trends. Community‐weighted mean changes in trait values in response to nitrogen addition, snow addition and warming were often different from species‐specific trait effects on abundance and establishment, reflecting in part the responses and traits of dominant species. Together, these results highlight that the effects of traits can differ by scale and response of interest.
... This finding suggests that these traits in Silene vulgaris do not play any role in the plant reproductive adaptation to the specific conditions of their local origins. This contradicts the commonly observed variation in other traits such as vegetative traits like canopy height (Jónsdóttir et al. 2023) and specific leaf area (Rosbakh et al. 2015). While research indicates that numerous plant species exhibit local adaptation, some argue that local adaptation might be less prevalent than commonly thought (e.g., Hereford 2009). ...
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Climate change‐induced heat waves often reduce seed yields and quality via high‐temperature effects in the gametophytic phase. Yet, in contrast to model and crop species, the ability of pollen and ovules to adapt or acclimate to heat stress in wild plants remains poorly understood. To address this gap, we examined the adaptation and acclimation potential of six gametophytic traits in 11 wild Silene vulgaris populations across a temperature gradient in Europe. First, we cultivated plants in a common garden to reveal differences in gametophytic traits indicative of adaptation. Next, we assessed their acclimation potential by subjecting flowering plants to two chronic heat stress (CHS) treatments: moderate (35°C/30°C) and severe (40°C/35°C) for 18 days. Also, we estimated the CHS effects on seed quantity and quality. The common garden experiment showed no intraspecific variation in gametophytic traits across the temperature gradient, suggesting these traits may not influence reproductive adaptation to local habitats. During CHS, the female gametophyte was less temperature‐sensitive than the male. Moderate CHS led to larger ovaries with more large‐sized ovules, while severe CHS reduced ovule numbers but increased their size. Both CHS treatments decreased pollen grain numbers, size, and anther length, with severe CHS causing greater reductions. These reductions in gametophytic traits led to lower seed yield and quality. Under both CHS treatments, acclimation potential did not vary along the temperature gradient, except for pollen size under severe CHS, which was larger in warmer climates. Our findings revealed the lack of adaptation and acclimation mechanisms in the gametophytic traits (except for pollen size) of wild Silene vulgaris populations along the temperature gradient. These findings suggest that Silene plants may rely on alternative strategies, such as shifts in gametophyte physiology and biochemistry or flowering phenology, to respond to thermal stress associated with heat waves.
... Meanwhile, both flooding and nitrogen stress also impact the connectivity within the trait network, a finding that contrasts with recent studies in multiyear permafrost ecosystems (Wei et al. 2023). This discrepancy may be due to increased phenotypic plasticity within species in riparian habitat ecosystems, which enhances trait variation among species (Jonsdottir et al. 2023). In summary, our findings indicate that both flooding and nitrogen stress alter core traits within the trait network. ...
Article
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Aims Plants respond to stress gradients by modifying various aspects of their morphology, physiology, architecture, allocation and mycorrhizal fungi. Yet, understanding how plants adapt to resource stress requires a comprehensive, integrated perspective that considers not only the consistency and variability of individual trait adjustments, but also the interplay between two key mechanisms: phenotypic plasticity (the direction and magnitude of trait adjustment) and phenotypic integration (the degree and pattern of trait covariation). Despite their importance, the coordination of these mechanisms in driving adaptive responses remains poorly understood. Methods To address these gaps, we measured the adjustment of 27 above- and below-ground traits across three dominant species (Cynodon dactylon, Xanthium strumarium, and Bidens tripartita), and explored trait networks, and the relationship between phenotypic plasticity and phenotypic integration in response to flooding and/or nitrogen in riparian habitats on the Three Gorges Reservoir area, China. Results The results show that both flooding and nitrogen stress induced shifts in species traits towards more acquisitive strategy, characterized by larger leaves, higher leaf nutrient concentrations, finer roots, larger specific root lengths, greater branching intensity, and elevated carboxylate concentrations. Flooding altered the hub trait with the highest centrality in the trait network from root branching intensity to leaf phosphorus content, while nitrogen stress shifted the hub trait from leaf area to root phosphorus content. Furthermore, a positive correlation was observed between phenotypic plasticity and integration, indicating that higher plasticity of functional traits facilitated better integration with other traits under flooding and nitrogen stress. Conclusions These findings suggest that plants exhibit more acquisitive traits in habitats experiencing flooding and/or nitrogen stress. Furthermore, a comprehensive assessment of phenotypic plasticity and its integration under compound stresses underscores the critical role of synergies between plasticity and integration in enhancing plant adaptability to environmental changes.
... Furthermore, our approach and findings may lead to new hypotheses. For example, whether genera with larger IGTV have broader range sizes (Rixen et al., 2022), whether the magnitude of IGTV exhibits phylogenetic conservatism (Ives et al., 2007), and whether high IGTV enhances community resistance to environmental changes (Jónsdóttir et al., 2023) are all questions worth exploring. Answers to these questions will expand our understanding of the ecology, evolution, and biogeography of these less-studied taxa. ...
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Animal body size exhibits rapid responses to environmental variations and displays considerable variability across ecological scales, significantly influencing ecological community assembly. However, our understanding of the extent of body size variation and its responses to environmental differences within soil fauna remains limited, impeding a comprehensive grasp of soil fauna's functional ecology. Here, we aim to investigate the magnitude of intrageneric body size variation and its implications for soil nematode community assembly along an altitudinal gradient. We examined soil nematode body size responses along an altitudinal gradient spanning from 3136 to 4128 m in an alpine mountain region of the eastern Tibetan Plateau. We assessed the contributions of intra‐ and intergeneric variations in body size, both within and among communities, using individual body size values. The implications of these variations for community assembly processes were determined through phenotypic variance ratios employing permutation tests. Our analyses did not reveal statistically significant correlations between altitude and the community‐weighted mean body mass, regardless of considering intrageneric trait variation (IGTV). Approximately 15% of the variation in body size among communities and a substantial 72% of the variation in body size within communities can be attributed to IGTV. Altitude did not significantly affect IGTV within or among communities. Furthermore, our results underscored the dominant role of internal filtering within the community in governing nematode community assembly, with external filtering outside the community playing a limited role within our altitudinal range. Our findings emphasize the dominant role of body size variation within communities rather than among communities, attributable to strong internal filtering processes. These findings advance our understanding of body size variation in soil nematodes across ecological scales and highlight the pivotal role of intrageneric variation in shaping the functional ecology of soil fauna.
... Of the four traits included in this study, only SLA responded to graminoid removal. A possible explanation for the low number of traits to respond might be that the response in the forb community is expressed in traits not measured here, such as chemical, physiological, or phenological traits (Thomas et al. 2018) or as a result of plastic or intraspecific trait responses (Rixen et al. 2022, Jónsdóttir et al. 2023), which are not detected when using traits collected at the site and not treatment level. Additionally, we do not fully address the potential investment in belowground biomass, where competition among functional groups might still be strong even after several years of above-ground graminoid removal (although graminoid regrowth is lessened with each subsequent year, suggesting graminoids are disappearing relatively quickly from the removal plots; see Olsen et al. 2016). ...
Article
Full-text available
Plant–plant interactions regulate plant community structure and function. Shifts in these interactions due to global climate change, mediated through disproportional increases of certain species or functional groups, may strongly affect plant community properties. Still, we lack knowledge of community‐level effects of climate‐driven changes in biotic interactions. We examined plant community interactions by experimentally removing a dominant functional group, graminoids, in semi‐natural grasslands in Southern Norway. To test whether the effect of graminoid removal varied with climate, the experiment was replicated across broad‐scale temperature and precipitation gradients. To quantify community‐level interactions across sites, we tested for changes in the remaining vascular community (i.e. forbs) cover, richness, evenness, and functional traits reflecting leaf‐economic investment and plant size over five years. The effect of graminoid removal on forb community structure and functioning varied over time, and along the climate gradients. Forb cover increased in response to graminoid removal, especially at warmer sites. Species richness increased following removal irrespective of climate, whilst evenness increased under warmer and wetter conditions irrespective of removal. No climate or removal effect was found for species turnover. Functional trait responses varied along the precipitation gradient – compared to controls, forb mean SLA decreased in drier conditions after graminoid removal. Leaf thickness increased under cooler and drier conditions irrespective of removal. These community structure alterations demonstrate stronger competitive interactions between forbs and graminoids under warmer conditions, whilst functional trait responses indicate a facilitative effect of graminoids under drier conditions. This indicates that both competition and facilitation regulate plant communities, suggesting complexity when scaling from populations to communities. Finally, both temperature and precipitation determine the direction and intensity of biotic interactions, with ecosystem‐wide implications for forb persistence and ecosystem functioning under future climates. Further work is needed to generalise the role of changing interactions in mediating community responses to climate change.
... Wright et al. studied ecological drivers and broad-scale regional distribution patterns of key plant traits [17]. The intraspecific trait variation (ITV) contributes to the stabilization of plant communities, resistance to climate warming, and preservation of ecosystem functions [18]. Plant trait networks (PTNs) have been increasingly utilized to explore and analyze the complex relationships between multiple traits [19] because they facilitate the visualization of complex trait interconnections and the interdependence of traits across various growth forms [20]. ...
Article
Full-text available
An improved understanding of the mechanisms underlying plant adaptation to habitat heterogeneity can be achieved by clarifying the climate-driving factors of the hydraulic and photosynthetic traits of different populations. With a focus on Populus pruinosa Schrenk, which is the predominant tree species in the desert riparian forests of the Tarim Basin, Xinjiang, this study investigated the hydraulic and photosynthetic trait relationships and their interactions with environmental factors in 11 P. pruinosa populations using a Pearson correlation analysis, plant trait networks, a redundancy analysis, and a least squares linear regression analysis. The results showed that the degree of variation in the hydraulic traits was higher than that in the photosynthetic traits. The net photosynthetic rate (Pn) showed a significantly positive correlation with leaf-specific conductivity (Kl) and the Huber value (Hv). The Hv exhibited a significantly positive correlation with the water-use efficiency and Kl, and the branch–leaf mass ratio significantly affected the hydraulic traits. The groundwater depth (GD) in natural P. pruinosa forest habitats ranged from 3.4 to 7.9 m. With an increase in the annual average temperature, the hydraulic conductivity of the xylem significantly increased; with an increase in GD, Pn and Kl significantly decreased. The temperature annual range, temperature seasonality (standard deviation), min temperature of the coldest month, and GD were significantly correlated with the diameter and average path length of the overall trait network parameters, and these environmental factors affected the coordination of the functional traits of P. pruinosa.
Article
Full-text available
Environmental changes, such as climate warming and higher herbivory pressure, are altering the carbon balance of Arctic ecosystems; yet, how these drivers modify the carbon balance among different habitats remains uncertain. This hampers our ability to predict changes in the carbon sink strength of tundra ecosystems. We investigated how spring goose grubbing and summer warming—two key environmental‐change drivers in the Arctic—alter CO2 fluxes in three tundra habitats varying in soil moisture and plant‐community composition. In a full‐factorial experiment in high‐Arctic Svalbard, we simulated grubbing and warming over two years and determined summer net ecosystem exchange (NEE) alongside its components: gross ecosystem productivity (GEP) and ecosystem respiration (ER). After two years, we found net CO2 uptake to be suppressed by both drivers depending on habitat. CO2 uptake was reduced by warming in mesic habitats, by warming and grubbing in moist habitats, and by grubbing in wet habitats. In mesic habitats, warming stimulated ER (+75%) more than GEP (+30%), leading to a 7.5‐fold increase in their CO2 source strength. In moist habitats, grubbing decreased GEP and ER by ~55%, while warming increased them by ~35%, with no changes in summer‐long NEE. Nevertheless, grubbing offset peak summer CO2 uptake and warming led to a twofold increase in late summer CO2 source strength. In wet habitats, grubbing reduced GEP (−40%) more than ER (−30%), weakening their CO2 sink strength by 70%. One‐year CO2‐flux responses were similar to two‐year responses, and the effect of simulated grubbing was consistent with that of natural grubbing. CO2‐flux rates were positively related to aboveground net primary productivity and temperature. Net ecosystem CO2 uptake started occurring above ~70% soil moisture content, primarily due to a decline in ER. Herein, we reveal that key environmental‐change drivers—goose grubbing by decreasing GEP more than ER and warming by enhancing ER more than GEP—consistently suppress net tundra CO2 uptake, although their relative strength differs among habitats. By identifying how and where grubbing and higher temperatures alter CO2 fluxes across the heterogeneous Arctic landscape, our results have implications for predicting the tundra carbon balance under increasing numbers of geese in a warmer Arctic.
Thesis
Widespread vegetation change is underway throughout the northern high latitudes in response to pervasive and accelerating Arctic warming. Such changes are becoming increasingly well documented with key aspects such as phenology, species composition and trait make-up known to be shifting across the tundra biome. However, one area that remains underrepresented in tundra vegetation studies is functional diversity, known to be a principal determinant of ecosystem function and consequently, services. Communities comprising higher functional diversity are considered more stable and resistant to global change impacts and as such, any loss of functional diversity under the influence of warming could have cascading impacts on ecosystem services and resultant feedbacks. Tundra functional diversity is hence an overlooked subject area with the potential to strongly influence ecosystems and communities throughout the far north in the coming decades. This thesis tackles this knowledge gap by: characterising its biome-scale biogeographic patterns and potential drivers (Chapter 3); identifying limitations in currently accepted gap-filling methodologies (Chapter 2); and developing new remotely-sensed approaches to better understand patterns in tundra functional diversity (Chapter 4). In Chapter 2, I used in situ trait data collected on individuals of multiple species under near-identical environmental and temporal conditions to determine the influence of explicitly incorporating spatial hierarchies on gap-filling performance in tundra trait matrices. I found that gap-filling across progressively higher spatial and taxonomic hierarchies reduced the accuracy of trait estimates, although such patterns were seen to be both scale and trait-specific. In Chapter 3, I undertook a biome-wide, in situ, cross-site synthesis of over 2,000 plots spanning ~40 years to determine, for what I believe is the first time, biome-scale biogeographic patterns in tundra vascular plant functional diversity across space and time and identify potential drivers of such patterns. I found that spatial patterns in functional diversity conform to those seen in species and functional diversity across latitudes globally and that whilst functional diversity exhibited no net directional change over time, plot-scale changes were strongly related to changes in functional group cover. Finally, in Chapter 4, I used airborne hyperspectral imagery from the Front Range, Colorado, USA to determine whether optical remote sensing can accurately track fine-scale differences in functional diversity throughout alpine tundra ecosystems across both space and time. I found that the method showed promise across space, tracking patterns in functional beta-diversity within years across our sample region, but exhibited limited potential over time, highlighting continued issues with remotely sensed time series in assessments of biodiversity. Overall, I believe this thesis has helped tackle large unknowns surrounding tundra functional diversity and has highlighted key research areas to target in the near future as rapid Arctic warming continues.
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Aims One of the most important questions of our time is how ecosystems will be transformed by climate change. Here, we used a five-year field experiment to investigate the effects of climate warming on the cover and function of a sub-Arctic alpine ecosystem in the highlands of Iceland dominated by biocrust, mosses and vascular plants. Methods We used Open Top Chambers (OTCs) to simulate warming; standard surface and Normalised Difference Vegetation Index (NDVI) analyses to measure plant cover and function; gas analyzers to monitor biocrust respiration; and the Tea Bag Index approach to estimate mass loss, decomposition and soil carbon stabilization rates. Results Contrary to our initial hypothesis of warming accelerating an ecological succession of plants growing on biocrust, we observed a warming-induced decreased abundance of vascular plants and mosses —possibly caused by high temperature summer peaks that resemble heat waves— and an increase in the cover of biocrust. The functional responses of biocrust to warming, including increased litter mass loss and respiration rates and a lower soil carbon stabilization rates, may suggest climate-driven depletion of soil nutrients in the future. Conclusion It remains to be studied how the effects of warming on biocrusts from high northern regions could interact with other drivers of ecosystem change, such as grazing; and if in the long-term global change could favor the growth of vascular plants on biocrust in the highlands of Iceland and similar ecosystems. For the moment, our experiment points to a warming-induced increase in the cover and activity of biocrust.
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Vegetation composition shifts, and in particular, shrub expansion across the Arctic tundra are some of the most important and widely observed responses of high-latitude ecosystems to rapid climate warming. These changes in vegetation potentially alter ecosystem carbon balances by affecting a complex set of soil–plant–atmosphere interactions. In this review, we synthesize the literature on (a) observed shrub expansion, (b) key climatic and environmental controls and mechanisms that affect shrub expansion, (c) impacts of shrub expansion on ecosystem carbon balance, and (d) research gaps and future directions to improve process representations in land models. A broad range of evidence, including in-situ observations, warming experiments, and remotely sensed vegetation indices have shown increases in growth and abundance of woody plants, particularly tall deciduous shrubs, and advancing shrublines across the circumpolar Arctic. This recent shrub expansion is affected by several interacting factors including climate warming, accelerated nutrient cycling, changing disturbance regimes, and local variation in topography and hydrology. Under warmer conditions, tall deciduous shrubs can be more competitive than other plant functional types in tundra ecosystems because of their taller maximum canopy heights and often dense canopy structure. Competitive abilities of tall deciduous shrubs vs herbaceous plants are also controlled by variation in traits that affect carbon and nutrient investments and retention strategies in leaves, stems, and roots. Overall, shrub expansion may affect tundra carbon balances by enhancing ecosystem carbon uptake and altering ecosystem respiration, and through complex feedback mechanisms that affect snowpack dynamics, permafrost degradation, surface energy balance, and litter inputs. Observed and projected tall deciduous shrub expansion and the subsequent effects on surface energy and carbon balances may alter feedbacks to the climate system. Land models, including those integrated in Earth System Models, need to account for differences in plant traits that control competitive interactions to accurately predict decadal- to centennial-scale tundra vegetation and carbon dynamics.
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Snow is an important driver of ecosystem processes in cold biomes. Snow accumulation determines ground temperature, light conditions, and moisture availability during winter. It also affects the growing season’s start and end, and plant access to moisture and nutrients. Here, we review the current knowledge of the snow cover’s role for vegetation, plant-animal interactions, permafrost conditions, microbial processes, and biogeochemical cycling. We also compare studies of natural snow gradients with snow experimental manipulation studies to assess time scale difference of these approaches. The number of tundra snow studies has increased considerably in recent years, yet we still lack a comprehensive overview of how altered snow conditions will affect these ecosystems. Specifically, we found a mismatch in the timing of snowmelt when comparing studies of natural snow gradients with snow manipulations. We found that snowmelt timing achieved by snow addition and snow removal manipulations (average 7.9 days advance and 5.5 days delay, respectively) were substantially lower than the temporal variation over natural spatial gradients within a given year (mean range 56 days) or among years (mean range 32 days). Differences between snow study approaches need to be accounted for when projecting snow dynamics and their impact on ecosystems in future climates.
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Snow is an important driver of ecosystem processes in cold biomes. Snow accumulation determines ground temperature, light conditions and moisture availability during winter. It also affects the growing season’s start and end, and plant access to moisture and nutrients. Here, we review the current knowledge of the snow cover’s role for vegetation, plant-animal interactions, permafrost conditions, microbial processes and biogeochemical cycling. We also compare studies of natural snow gradients with snow manipulation studies, altering snow depth and duration, to assess time scale difference of these approaches. The number of studies on snow in tundra ecosystems has increased considerably in recent years, yet we still lack a comprehensive overview of how altered snow conditions will affect these ecosystems. In specific, we found a mismatch in the timing of snowmelt when comparing studies of natural snow gradients with snow manipulations. We found that snowmelt timing achieved by manipulative studies (average 7.9 days advance, 5.5 days delay) were substantially lower than those observed over spatial gradients (mean range of 56 days) or due to interannual variation (mean range of 32 days). Differences between snow study approaches need to be accounted for when projecting snow dynamics and their impact on ecosystems in future climates.
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The trait composition and trait diversity of plant communities are globally applicable predictors of ecosystem functioning. Yet, it is unclear how plant traits influence carbon cycling. This is an important question in the tundra where vegetation shifts are occurring across the entire biome, and where soil organic carbon stocks are large and vulnerable to environmental change. To study how plant traits affect carbon cycling in the tundra, we built a model that explained carbon cycling (above‐ground and soil organic carbon stocks, and photosynthetic and respiratory fluxes) with abiotic conditions (air temperature and soil moisture), and the averages and within‐community variabilities of three above‐ground traits: plant height, leaf dry matter content (LDMC) and SLA. These functional parameters were represented by abundance‐weighted means and standard deviations of species traits. The data were collected from an observational study setting from northern Finland. The explanatory power of the models was relatively high, but a large part of variation in soil organic carbon stocks remained unexplained. Average plant height was the strongest predictor of all carbon cycling variables except soil carbon stocks. Communities of larger plants were associated with larger CO2 fluxes and above‐ground carbon stocks. Communities with fast leaf economics (i.e. high SLA and low LDMC) had higher photosynthesis, ecosystem respiration and soil organic carbon stocks. Within‐community variability in plant height, SLA and LDMC affected ecosystem functions differently. Variability in SLA and LDMC increased CO2 fluxes and soil organic carbon stocks, while variability in height increased the above‐ground carbon stock. The contributions of within‐community trait variability metrics to ecosystem functioning within the study area were about as important as those of average SLA and LDMC. Synthesis. Plant height, SLA and LDMC have clear effects on tundra carbon cycling. The importance of within‐community trait variability highlights a potentially important mechanism controlling the vast tundra carbon pools that should be better recognized. More research on root traits and decomposer communities is needed to understand the below‐ground mechanisms regulating carbon cycling in the tundra.
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Soils are warming as air temperatures rise across the Arctic and Boreal region concurrent with the expansion of tall-statured shrubs and trees in the tundra. Changes in vegetation structure and function are expected to alter soil thermal regimes, thereby modifying climate feedbacks related to permafrost thaw and carbon cycling. However, current understanding of vegetation impacts on soil temperature is limited to local or regional scales and lacks the generality necessary to predict soil warming and permafrost stability on a pan-Arctic scale. Here we synthesize shallow soil and air temperature observations with broad spatial and temporal coverage collected across 106 sites representing nine different vegetation types in the permafrost region. We showed ecosystems with tall-statured shrubs and trees (>40 cm) have warmer shallow soils than those with short-statured tundra vegetation when normalized to a constant air temperature. In tree and tall shrub vegetation types, cooler temperatures in the warm season do not lead to cooler mean annual soil temperature indicating that ground thermal regimes in the cold-season rather than the warm-season are most critical for predicting soil warming in ecosystems underlain by permafrost. Our results suggest that the expansion of tall shrubs and trees into tundra regions can amplify shallow soil warming, and could increase the potential for increased seasonal thaw depth and increase soil carbon cycling rates and lead to increased carbon dioxide loss and further permafrost thaw.
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In a rapidly warming tundra, ecosystems will undergo major environmental changes that are predicted to significantly alter belowground processes such as decomposition of plant litter. Making use of International Tundra Experiment sites (ITEX), which were established approximately two decades ago, we examined the long-term impacts of warming on decomposition. We used the Tea Bag Index (TBI) methodology to measure the annual mass loss (%) of two tea types as a proxy for potential decomposition rates, across five tundra vegetation types. Direct effects of warming were assessed by comparing mass loss within and outside warming manipulations. Indirect effects of warming, such as those caused by warming-induced changes in plant community composition, were assessed through the relationship between mass loss of tea and local biotic and abiotic conditions. We found positive effects of warming on decomposition, although the responses varied between vegetation and tea types. Interestingly, we found support for the indirect influence of long-term warming on decomposition through warming-induced changes in the composition of plant communities. Our findings demonstrate the complexity in decomposition responses to warming across different vegetation types and highlight the importance of long-term legacies of warming in decomposition responses across the Arctic.
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In the tundra, woody plants are dispersing towards higher latitudes and altitudes due to increasingly favourable climatic conditions. The coverage and height of woody plants are increasing, which may influence the soils of the tundra ecosystem. Here, we use structural equation modelling to analyse 171 study plots and to examine if the coverage and height of woody plants affect the growing-season topsoil moisture and temperature (< 10 cm) as well as soil organic carbon stocks (< 80 cm). In our study setting, we consider the hierarchy of the ecosystem by controlling for other factors, such as topography, wintertime snow depth and the overall plant coverage that potentially influence woody plants and soil properties in this dwarf shrub-dominated landscape in northern Fennoscandia. We found strong links from topography to both vegetation and soil. Further, we found that woody plants influence multiple soil properties: the dominance of woody plants inversely correlated with soil moisture, soil temperature, and soil organic carbon stocks (standardised regression coefficients = − 0.39; − 0.22; − 0.34, respectively), even when controlling for other landscape features. Our results indicate that the dominance of dwarf shrubs may lead to soils that are drier, colder, and contain less organic carbon. Thus, there are multiple mechanisms through which woody plants may influence tundra soils.
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The vegan package provides tools for descriptive community ecology. It has most basic functions of diversity analysis, community ordination and dissimilarity analysis. Most of its multivariate tools can be used for other data types as well. # The functions in the vegan package contain tools for diversity analysis, ordination methods and tools for the analysis of dissimilarities. Together with the labdsv package, the vegan package provides most standard tools of descriptive community analysis. Package ade4 provides an alternative comprehensive package, and several other packages complement vegan and provide tools for deeper analysis in specific fields. Package https://CRAN.R-project.org/package=BiodiversityR provides a Graphical User Interface (GUI) for a large subset of vegan functionality. # The vegan package is developed at GitHub (https://github.com/vegandevs/vegan/). GitHub provides up-to-date information and forums for bug reports. Most important changes in vegan documents can be read with news(package="vegan") and vignettes can be browsed with browseVignettes("vegan"). The vignettes include a vegan FAQ, discussion on design decisions, short introduction to ordination and discussion on diversity methods. A tutorial of the package at http://cc.oulu.fi/~jarioksa/opetus/metodi/vegantutor.pdf provides a more thorough introduction to the package. To see the preferable citation of the package, type citation("vegan").
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Soils are warming as air temperatures rise across the Arctic and Boreal region concurrent with the expansion of tall-statured shrubs and trees in the tundra. Changes in vegetation structure and function are expected to alter soil thermal regimes, thereby modifying climate feedbacks related to permafrost thaw and carbon cycling. However, current understanding of vegetation impacts on soil temperature is limited to local or regional scales and lacks the generality necessary to predict soil warming and permafrost stability on a pan-Arctic scale. Here we synthesize shallow soil and air temperature observations with broad spatial and temporal coverage collected across sites representing nine different vegetation types in the permafrost region. We showed ecosystems with tall-statured shrubs and trees (> 40 cm) have warmer shallow soils than those with short statured tundra vegetation when normalized to a constant air temperature. In tree and tall shrub vegetation types, cooler temperatures in the warm season do not lead to cooler mean annual soil temperature indicating that ground thermal regimes in the cold-season rather than the warm season are most critical for predicting soil warming in ecosystems underlain by permafrost. Our results suggest that the expansion of tall shrubs and trees into tundra regions can amplify shallow soil warming, and could increase the potential for increased seasonal thaw depth and increase soil carbon cycling rates and lead to increased carbon dioxide loss and further permafrost thaw.