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Touch DNA Collection Techniques for Non-Porous Surfaces Using Cotton and Nylon Swabs

Authors:
  • Dubai Police force - General Department of Forensic Science and Criminology

Abstract

Touch DNA, commonly known as trace DNA, is widely used in forensic DNA casework. However, touch DNA samples are challenging because of the many variables that can impact the success of obtaining a good quality usable DNA profile. Cotton and nylon flocked swabs are often used to collect touch DNA from surfaces, so this study aimed to test different techniques using cotton (150C) and nylon flocked (4N6FLOQSwabs®) swabs to collect touch DNA from non-porous surfaces. There was a significant difference amongst the three recovery techniques tested to recover touch DNA with cotton swabs and nylon swabs from textured plastic (p < 0.001), with a nylon swab and 30μl of distilled water being more efficient than a cotton swab with 100μl of distilled water. There was also a significant difference between the four recovery techniques to recover touch DNA from glass surfaces exposed to high humidity and low temperature (5 °C/78%) (p <0.001), with a dry cotton or nylon swab being allowing more efficient recovery of touch DNA from non-porous humid surfaces such as glass.
Article
Touch DNA Collection Techniques for Non-
Porous Surfaces using Cotton and Nylon Swabs
Alketbi, Salem Khalifa and Goodwin, William H
Available at http://clok.uclan.ac.uk/38390/
Alketbi, Salem Khalifa ORCID: 0000-0002-7773-3953 and Goodwin, William H ORCID:
0000-0002-3632-3552 (2021) Touch DNA Collection Techniques for Non-Porous
Surfaces using Cotton and Nylon Swabs. Biomedical Journal of Scientific and Technical
Research, 36 (3). pp. 28608-28611. ISSN 2574-1241
It is advisable to refer to the publisher’s version if you intend to cite from the work.
10.26717/BJSTR.2021.36.005863
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Copyright@ Salem K Alketbi | Biomed J Sci & Tech Res | BJSTR. MS.ID.005863. 28608
Short Communication
ISSN: 2574 -1241
Touch DNA Collection Techniques for Non-Porous
Surfaces Using Cotton and Nylon Swabs
Salem K Alketbi1,2* and Goodwin W1
1University of Central Lancashire, Preston, UK
2General Department of Forensic Science and Criminology, Dubai Police, Dubai, UAE
*Corresponding author: Salem K Alketbi, University of Central Lancashire, Preston, UK
DOI: 10.26717/BJSTR.2021.36.005863
ARTICLE INFO ABSTRACT
Touch DNA, commonly known as trace DNA, is widely used in forensic DNA casework.
However, touch DNA samples are challenging because of the many variables that can
             
       
    

amongst the three recovery techniques tested to recover touch DNA with cotton swabs

  

from glass surfaces exposed to high humidity and low temperature (5 °C/78%) (p <

DNA from non-porous humid surfaces such as glass.
Received: June 05, 2021
Published: June 15, 2021
Citation: Salem K Alketbi, Goodwin W.
Touch DNA Collection Techniques for
Non-Porous Surfaces Using Cotton and
Nylon Swabs. Biomed J Sci & Tech Res
36(3)-2021. BJSTR. MS.ID.005862.
Keywords:  
 

   
Kit
Introduction
Touch DNA, commonly known as trace DNA, is widely used in
forensic DNA casework as it is an important tool to link suspects
to crime scenes, especially when other types of biological
         
         
    
       
collection of touch DNA from a wide range of surfaces and items
       
       
       
          
       
to collect touch DNA from surfaces and a study by Alketbi and

      
DNA from glass (smooth non-porous surface). Therefore, this study
aimed to test different techniques using cotton (150C) and nylon
       
non-porous surfaces. Three recovery techniques were evaluated

the quantity of collected touch DNA. Also, four recovery techniques
      
recovery.
Materials and Methods
Experimental Setup and Deposition
        
requested to wash their hands with antibacterial soap, abstain from
          
        
enough DNA. After a further 5 minutes, the participant was asked
Copyright@ Salem K Alketbi | Biomed J Sci & Tech Res | BJSTR. MS.ID.005863.
Volume 36- Issue 3 DOI: 10.26717/BJSTR.2021.36.005863
28609
        
both hands one at a time, by applying medium pressure on a 5x7cm
surface area for one minute. The participant was instructed to
repeat the same process for each surface deposition. The surfaces
were sterilised before use using 2% Virkon (viricidal disinfectant)
and ultraviolet radiation (UV) for 15 minutes.
Experiment one
Touch DNA samples deposited on textured plastic (rough non-
porous surface) (n=36) were collected immediately after deposition
using cotton and nylon swabs. Different quantities of distilled water
were used to moisten the swabs via plastic spray bottle technique

 
 
 
manufacturer (n=12)
The DNA was extracted from the swabs heads using the
       

Experiment Two
Touch DNA was deposited on glass (smooth non-porous surface)


     
spray bottle (n=8)
b) Dry cotton swab (n=8)
c) Dry Nylon swab (n=8)
         
pipette (n=8)
   

DNA Quantification and Analysis
       
       
(qPCR) and HID Real-Time PCR analysis software v1.3 (Thermo
      
Statistical analysis was performed with RStudio using factorial
        
sterilisation and negative controls for the collection and extraction
methods were all negative for DNA.
Results and Discussion
Experiment one
  
techniques to collect touch DNA with cotton and nylon swabs from
            
           

     

of wetting reagent on the nylon swab resulted in some of the DNA
   
2).
Figure 1: The amount of DNA recovered from twelve replicates (n=36) by each technique:
(a) Cottonswabwith100μlwater,
(b) N=nylonswabwith100μlwaterand
(c) Nylonswabwith30μlwater.
Copyright@ Salem K Alketbi | Biomed J Sci & Tech Res | BJSTR. MS.ID.005863.
Volume 36- Issue 3 DOI: 10.26717/BJSTR.2021.36.005863
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Figure 2: The mean DNA quantity recovered (n=36) by each technique:
(a) Cottonswabwith100μlwater,
(b) Nylonswabwith100μlwaterand
(c) Nylonswabwith30μlwater.Errorbarsrepresentstandarderror.
Experiment Two
       
techniques tested to collect touch DNA with cotton and nylon swabs
from glass surfaces exposed to high humidity and low temperature


non-porous humid surfaces such as glass. Using moist cotton (a) or
nylon (d) swabs can leave some of the trace DNA uncollected on the


Figure 3: The amount of DNA recovered from eight replicates (n=32) by each technique:
(a) Moistcottonswab,
(b) Drycottonswab,
(c) Dry nylon swab and
(d) Moistnylonswab.
Copyright@ Salem K Alketbi | Biomed J Sci & Tech Res | BJSTR. MS.ID.005863.
Volume 36- Issue 3 DOI: 10.26717/BJSTR.2021.36.005863
28611
Figure 4: Mean of DNA recovered from eight replicates (n=32) by each technique:
(a) Moistcottonswab,
(b) Drycottonswab,
(c) Dry nylon swab and
(d) Moistnylonswab.Errorbarsrepresentstandarderror.
Conclusion

amount of DNA recovered from non-porous surfaces. Nylon swabs
are recommended for the recovery of touch DNA from non-porous,

the quantity of touch DNA recovered from non-porous surfaces
such as glass, therefore, dry swabs are recommended to improve
DNA recovery.
Acknowledgement

Science and Criminology in Dubai Police and ethical approval was
          
University of Central Lancashire’s Research Ethics Committee (ref.
         
     

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3.           

 

5.           
     

6. 
for sampling different biological materials from different substrates.

7.           
       

8.         

           

Copyright@ Salem K Alketbi | Biomed J Sci & Tech Res | BJSTR. MS.ID.005863.
Volume 36- Issue 3 DOI: 10.26717/BJSTR.2021.36.005863
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ISSN: 2574-1241
10.26717/BJSTR.2021.36.005863
Salem K Alketbi. Biomed J Sci & Tech Res
... Validating different collection methods or techniques can improve Touch DNA sampling [10][11][12][13][14][15][16], therefore, this study investigated three collection techniques involving cotton and nylon swabs to test their e ciency for the collection of Touch DNA from the human neck. ...
... Based on a study by Kallupurackal et al.,[8], cotton and nylon swabs are equally effective on collecting Touch DNA from human skin, while SceneSafe Fast™ minitapes appear to be the least effective method for the scenario of Touch DNA collection from the skin of the victim. However, using the appropriate technique with cotton or nylon swabs can enhance their performance on collecting Touch DNA from human skin, or touched items [10][11]. ...
Preprint
Full-text available
Trace DNA is a significant type of evidence for its ability to be collected from touched items or surfaces at crime scenes to link suspects to their crimes. In cases of violent crimes like assault, sexual offences, or even homicide, often touch DNA is collected from the victim’s skin. However, the collection of Touch DNA from the victim's skin can be complex because of the mixture of DNA present, as there is likely to be a small quantity of the offender’s DNA compared to the victim’s DNA. Validating different collection methods or techniques can improve Touch DNA sampling, therefore, this study investigated three collection techniques involving cotton and nylon swabs to test their efficiency for the collection of touch DNA from the human neck. There was a significant difference between the three recovery techniques used to recover Touch DNA with a cotton swab (CS) ( p < 0.05) and nylon swab (NS) ( p < 0.05), with more alleles observed when the neck skin was moistened with 100 µl of distilled water using spray a bottle before collection for both swabs.
... In manual strangulation, there is intense physical contact between the offender and the victim; thus, the offender's epithelial cells are deposited on the victim's neck but the collection of touch DNA from the victim's skin can be complex because of the mixture of DNA present containing a small quantity of the offender's DNA compared to the victim's DNA. Validating different collection methods or techniques can improve touch DNA sampling [20][21][22]; therefore, this study investigated three collection techniques involving cotton and nylon swabs to test their efficiency for the collection of touch DNA from the human neck. ...
Article
Full-text available
Trace DNA is a significant type of evidence for its ability to be collected from touched items or surfaces at crime scenes to link suspects to their crimes. In cases of violent crimes like assault, sexual offences, or even homicide, often touch DNA is collected from the victim’s skin. However, the collection of touch DNA from the victim’s skin can be complex because of the mixture of DNA present, as there is likely to be a small quantity of the offender’s DNA compared to the victim’s DNA. Validating different collection methods or techniques can improve touch DNA sampling; therefore, this study investigated three collection techniques involving cotton and nylon swabs to test their efficiency for the collection of touch DNA from the human neck. There was a significant difference between the three recovery techniques used to recover touch DNA with a cotton swab (CS) (p < 0.05) and nylon swab (NS) (p < 0.05), with more alleles observed when the neck skin was moistened with 100 μL of distilled water using a spray bottle before collection with both swabs.
... Touched items at the crime scenes are frequently analysed to help link suspects to crimes, for example, Touch DNA can be collected from victims' clothes in many cases such as sexual assault, homicide, and theft. Many factors influence the amount of Touch DNA collected [1], such as surface type and collection method or technique used [2][3][4][5][6], the time between the deposition and collection, as well as environmental factors [7][8][9]. Tape lifting is the preferred method of choice for collecting trace DNA from clothes, fabric items and porous surfaces such as paper [2,[10][11][12]. ...
Article
Full-text available
Touched items at crime scenes are frequently analysed to help link suspects to crimes, for example, Touch DNA is collected from victims’ clothes in cases such as sexual assault, homicide, theft etc. Tape lifting is the preferred collection method of choice for trace DNA from clothes, fabric items and porous surfaces such as paper, therefore this study investigated the impact of deposition area and time on Touch DNA collected from fabric using minitapes. The amount of Touch DNA collected from the fabric was significantly affected by deposition area (p < 0.05), time (p < 0.05) and the interaction between the deposition area and time (p < 0.05), with the quantity of DNA collected decreasing over time. Also, the buttocks area of the trouser compared to the chest area is more prone to friction from an activity like repeatedly sitting on different surfaces which reduces the amount of Touch DNA available. In conclusion, it is more effective to collect trace DNA from victim clothes as soon as possible after the crime is committed.
... Touched items at the crime scenes are frequently analysed to help link suspects to crimes, for example, Touch DNA can be collected from victims' clothes in many cases such as sexual assault, homicide, and theft. Many factors influence the amount of Touch DNA collected [1], such as surface type and collection method or technique used [2][3][4][5][6], the time between the deposition and collection, as well as environmental factors [7][8][9]. Tape lifting is the preferred method of choice for collecting trace DNA from clothes, fabric items and porous surfaces such as paper [2,[10][11][12]. ...
Article
Full-text available
There are different variables that affect the success of Touch DNA recovery, including surface type, the collection method used and extraction techniques. This experiment investigated how a range of porous and non-porous surfaces, different DNA collection (cotton swab, nylon flocked swab and SceneSafe Fast™ minitape) and extraction methods (PrepFiler Express BTA™ and QIAamp® DNA Investigator) affected touch DNA recovery.
... Trace or Touch DNA is one of the most common types of DNA samples found at crime scenes and is often collected in vast quantities from crime scene exhibits. However, it is frequently found in minute quantities and the process of Touch DNA profiling can be impacted by many factors [1][2][3][4][5][6][7][8][9][10][11][12][13][14], which leads to low levels of DNA recovery, such as the efficiency of DNA extraction and quantification methods [4,15]. Quantification methods that use real-time PCR (qPCR) technology are highly sensitive compared to regular quantification methods such as Nano Drop™ or Gel electrophoresis, so they are the preferred technique for the quantification of trace DNA samples. ...
Article
Full-text available
Trace or Touch DNA is one of the most common types of DNA samples found at crime scenes and is often collected in vast quantities from crime scene exhibits. Quantification methods that use real-time PCR (qPCR) technology are highly sensitive compared to traditional quantification methods, therefore, this study evaluated the performance of Quantifiler™ Human and Quantifiler™ Trio quantification kits for the same set of trace DNA samples collected from handled items recovered from crime scenes at the Biology and DNA Section of the General Department of Forensic Science and Criminology of Dubai Police Force. Both methods achieved comparable results indicating that there was no significant difference between the two quantification methods to quantify the collected trace DNA from the handled items (p > 0.05).
... Touch DNA is present on many used items but is often challenging [1][2][3][4][5][6][7][8][9][10][11][12][13]. However, direct amplification in DNA profiling omits the DNA extraction and quantification steps, directly amplifying the DNA by PCR after sample collection. ...
Article
Full-text available
DNA direct amplification from biological samples such as saliva and blood has proven to be successful but can be more challenging from minute samples such as trace DNA. Developing new protocols to collect and process Touch DNA samples can improve DNA direct amplification, therefore a variety of collection methods were investigated for their efficiency to collect Touch DNA for direct amplification using a GlobalFiler™ PCR amplification Kit. Touch Samples were collected from six surfaces to test the sensitivity of the collection method for direct amplification, with the number of alleles observed from the DNA profiles significantly affected by collection type (p < 0.001). Copan microFLOQ swabs (MF) and SceneSafe Fast™ Minitapes (MT) recovered a higher percentage of alleles and were more reliable for direct DNA amplification.
... Touched items at the crime scenes are frequently analysed to help link suspects to crimes, for example, Touch DNA can be collected from victims' clothes in many cases such as sexual assault, homicide, and theft. Many factors influence the amount of Touch DNA collected [1], such as surface type and collection method used [2][3][4][5][6], the time between the deposition and collection, as well as environmental factors [7][8][9]. Tape lifting is the preferred method of choice for collecting trace DNA from clothes, fabric items and porous surfaces such as paper [2,10-12]. ...
Poster
Full-text available
Touched items at crime scenes are frequently analysed to help link suspects to crimes, for example, Touch DNA is collected from victims’ clothes in cases such as sexual assault, homicide, theft etc. Tape lifting is the preferred collection method of choice for trace DNA from clothes, fabric items and porous surfaces such as paper, therefore this study investigated the impact of deposition area and time on Touch DNA collected from fabric using minitapes. The amount of Touch DNA collected from the fabric was significantly affected by deposition area (p < 0.05), time (p < 0.05) and the interaction between the deposition area and time (p < 0.05), with the quantity of DNA collected decreasing over time. Also, the buttocks area of the trouser compared to the chest area is more prone to friction from an activity like repeatedly sitting on different surfaces which reduces the amount of Touch DNA available. In conclusion, it is more effective to collect trace DNA from victim clothes as soon as possible after the crime is committed.
... Touched items at the crime scenes are frequently analysed to help link suspects to crimes, for example, Touch DNA can be collected from victims' clothes in many cases such as sexual assault, homicide, and theft. Many factors influence the amount of Touch DNA collected [1], such as surface type and collection method or technique used [2][3][4][5][6], the time between the deposition and collection, as well as environmental factors [7][8][9]. Tape lifting is the preferred method of choice for collecting trace DNA from clothes, fabric items and porous surfaces such as paper [2,[10][11][12]. ...
Article
Touched items at crime scenes are frequently analysed to help link suspects to crimes, for example, Touch DNA is collected from victims’ clothes in cases such as sexual assault, homicide, theft etc. Tape lifting is the preferred collection method of choice for trace DNA from clothes, fabric items and porous surfaces such as paper, therefore this study investigated the impact of deposition area and time on Touch DNA collected from fabric using minitapes. The amount of Touch DNA collected from the fabric was significantly affected by deposition area (p < 0.05), time (p < 0.05) and the interaction between the deposition area and time (p < 0.05), with the quantity of DNA collected decreasing over time. Also, the buttocks area of the trouser compared to the chest area is more prone to friction from an activity like repeatedly sitting on different surfaces which reduces the amount of Touch DNA available. In conclusion, it is more effective to collect trace DNA from victim clothes as soon as possible after the crime is committed.
... Touch DNA profiling is a commonly used tool to link suspects to their crimes. Touch DNA is present on many crime scene items but is often challenging compared to other types of DNA evidence [1][2][3][4][5][6][7][8][9], such as blood and saliva because it is usually found in minute quantities. The use of direct amplification techniques to avoid sample extraction and quantification during the DNA profiling process can help preserve DNA loss [1]. ...
Article
Full-text available
Touch DNA Profiling is a commonly used tool to link suspects to their crimes, but it is often challenging compared to other types of DNA evidence, such as blood and saliva, because it is usually found in minute quantities. Using direct amplification techniques to avoid sample extraction and quantification during the DNA profiling process can help preserve DNA loss. Therefore, this study explored an innovative solution to collect blood, saliva and Touch DNA using a cotton swab in combination with a microFLOQ® swab (CS+MF) for direct amplification to preserve the collected samples for re-analysis or additional testing. The allele recovery rate was 100% for blood and saliva samples, and 84% for trace samples, with a considerable difference in the average signal (RFU) between the evidence types (p < 0.001).
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Trace DNA evidence has become an essential tool in forensic investigations, but its reliability is dependent on strict adherence to protocols and procedures that ensure the integrity of the evidence is preserved throughout the investigation. Maintaining a clear chain of custody is critical to the admissibility of evidence in court, and its absence can result in the exclusion of evidence or even a mistrial being declared. Contamination is a significant issue when collecting DNA evidence at a crime scene, and anti-contamination measures must be taken to ensure the reliability and accuracy of the evidence. The use of technology, such as electronic chain of custody (eCOC), automated DNA extraction systems, real-time PCR analysis, DNA profiling software, and environmental monitoring systems, can enhance the accuracy and reliability of evidence. Law enforcement agencies and forensic labs must establish strict guidelines for the collection, preservation, and analysis of trace DNA evidence to maintain its integrity and admissibility in court.
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Touch or trace DNA analysis has become an important routine of the forensic laboratory workload and a useful tool for investigators. Most samples, such as touch DNA, are collected using cotton swabs and choosing the right collection technique when using a cotton swab can improve DNA recovery from the surfaces. Therefore, this paper investigates three recovery techniques commonly used with cotton swabs and validate different conditions on the collected swabs such as drying prior freezing or direct freezing to see how they affect the amount of DNA recovered. The results show that there is a significant difference between the three recovery techniques used to recover touch DNA with cotton swab (p<0.001), similarly with the cotton swab tested conditions prior extraction (p<0.001)
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Touch DNA profiling is an important tool to solve the mystery of many cases, especially when other biological evidences cannot be found in crime scene. However, there are many variables that influence Touch DNA profiling such as recovery techniques and extraction. In addition, effect of environmental factors on items found outdoor such as sand can impact on the process. Therefore the aim of this experiment was to test how sandy surfaces can affect the recovery of Touch DNA Profiling by validation two recovery methods and two extraction kits that are widely used in the DNA forensic field.
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Touch DNA, trace DNA or Low copy number has become an area of interest in recent years because of its importance when other type of biological evidences might not be available. However, minimal efforts have been devoted to develop the collection methods of touch DNA, and the success of DNA typing depends on the availability of existing DNA templates. In most cases DNA leaves sufficient quantity and quality of genomic DNA to produce a DNA profile. However, some variables affect the success of obtaining a good quality DNA profile. Such variables include shedder status, surface type, pressure of contact; other variables include the methods of DNA collection and the methods of DNA extraction.
Article
Touch DNA analysis has become an important aspect of a forensic laboratory’s workload and a crucial tool for investigators in many cases. However, there is a lack of research regarding the influence of environmental conditions on Touch DNA, which is proven to reduce traces of biological material in samples. This study investigated the influence of time between deposition and recovery of Touch DNA, as well as the impact of temperature and humidity on a range of porous and non-porous surfaces.
Article
There are different variables that affect the success of Touch DNA recovery, including surface type, the collection method used and extraction techniques. This experiment investigated how a range of porous and non-porous surfaces, different DNA collection (cotton swab, nylon flocked swab and SceneSafe Fast™ minitape) and extraction methods (PrepFiler Express BTA™ and QIAamp® DNA Investigator) affected touch DNA recovery.
Article
Currently, there is a variety of swabs for collection of biological evidence from crime scenes, but their comparative efficiency is unknown. Here, we report the results of an investigation into the efficiency of different swab types to collect blood, saliva and touch DNA from a range of substrates. The efficiency of extracting blood and saliva from each swab type was also tested. Some swabs were significantly more effective than others for sampling biological materials from different substrates. Swabs with the highest sampling efficiency, however, often did not have the highest extraction efficiency. Observations were recorded regarding practicality of each swab in a variety of situations. Our study demonstrates that selection of sampling device impacts greatly upon successful collection and extraction of DNA. We present guidelines to assist in evaluation of swab choice.
Article
Forensic scientists regularly generate genetic profiles from old blood stains, seminal stains, vaginal swabs, hair, bone, urine and cigarette butts. We show that an individual's genetic profile can now also be generated from swabs taken from objects touched by hands, providing a new tool for crime scene investigations. Our findings also demonstrate the need for caution when handling exhibits and when interpreting results.
An investigation of DNA recovery from firearms and cartridge cases
  • D Polley
  • P Mickiewicz
  • M Vaughn
  • T Miller
  • R Warburton
Polley D, Mickiewicz P, Vaughn M, Miller T, Warburton R, et al. (2006) An investigation of DNA recovery from firearms and cartridge cases. J Canadian Soc Forensic Sci 39: 217-228.
Forensic trace DNA: A review
  • R Oorschot
  • K Ballantyne
  • R J Mitchell
Oorschot R, Ballantyne K, Mitchell RJ (2010) Forensic trace DNA: A review. Investigative Genetics, 1(1): 14014.