ArticlePDF Available

The Generalization of the Periodic Orbit Dividing Surface for Hamiltonian Systems with Three or More Degrees of Freedom – II

World Scientific
International Journal of Bifurcation and Chaos
Authors:

Abstract and Figures

We develop a method for the construction of a dividing surface using periodic orbits in Hamiltonian systems with three or more degrees-of-freedom that is an alternative to the method presented in [Katsanikas & Wiggins, 2021]. Similar to that method, for an n degrees-of-freedom Hamiltonian system, we extend a one-dimensional object (the periodic orbit) to a 2n − 2 dimensional geometrical object in the energy surface of a 2n − 1 dimensional space that has the desired properties for a dividing surface. The advantage of this new method is that it avoids the computation of the normally hyperbolic invariant manifold (NHIM) (as the first method did) and it is easier to numerically implement than the first method of constructing periodic orbit dividing surfaces. Moreover, this method has less strict required conditions than the first method for constructing periodic orbit dividing surfaces. We apply the new method to a benchmark example of a Hamiltonian system with three degrees-of-freedom for which we are able to investigate the structure of the dividing surface in detail. We also compare the periodic orbit dividing surfaces constructed in this way with the dividing surfaces that are constructed starting with a NHIM. We show that these periodic orbit dividing surfaces are subsets of the dividing surfaces that are constructed from the NHIM.
Content may be subject to copyright.
June 1, 2021 13:0 katsanikas˙wiggins
International Journal of Bifurcation and Chaos
c
World Scientific Publishing Company
The Generalization of the Periodic Orbit Dividing Surface for
Hamiltonian Systems with Three or more Degrees of Freedom -II
MATTHAIOS KATSANIKAS AND STEPHEN WIGGINS
School of Mathematics, University of Bristol,
Fry Building, Woodland Road, Bristol, BS8 1UG, United Kingdom.
matthaios.katsanikas@bristol.ac.uk, s.wiggins@bristol.ac.uk
Received (to be inserted by publisher)
We develop a method for the construction of a dividing surfaces using periodic orbits in Hamil-
tonian systems with three or more degrees-of-freedom that is an alternative to the method
presented in [Katsanikas & Wiggins, 2021]. Similar to that method, for an ndegrees-of-freedom
Hamiltonian system we extend a 1-dimensional object (the periodic orbit) to a 2n2 dimen-
sional geometrical object in the energy surface of a 2n1 dimensional space that has the desired
properties for a dividing surface. The advantage of this new method is that it avoids the compu-
tation of the normally hyperbolic invariant manifold (NHIM) (as the first method did) and it is
easier to numerically implement than the first method of the constructing periodic orbit dividing
surfaces. Moreover, this method has less strict required conditions than the first method for con-
structing periodic orbit dividing surfaces. We apply the new method to a benchmark example
of a Hamiltonian system with three degrees of freedom for which we are able to investigate the
structure of the dividing surface in detail. We also compare the periodic orbit dividing surfaces
constructed in this way with the dividing surfaces that are constructed starting with a NHIM.
We show that these periodic orbit dividing surfaces are subsets of the dividing surfaces that are
constructed from the NHIM.
Keywords: Chemical reaction dynamics; phase space; Hamiltonian system, periodic orbits; Di-
viding surfaces; normally hyperbolic invariant manifold; Dynamical Astronomy;
1. Introduction
This paper is a consequence of a previous paper ( we will refer to that paper as paper I- [Katsanikas &
Wiggins, 2021]) concerning the construction of dividing surfaces in Hamiltonian systems with three or more
degrees of freedom using as a starting point a periodic orbit.
Dividing surfaces are surfaces of one less dimension than that of the energy surface of a Hamiltonian
system and they are an essential ingredient for the transition state theory [Wigner, 1938; Waalkens et al.,
2007] in chemical reaction dynamics. The computation of these structures can be done through the classical
method of [Pechukas & McLafferty, 1973; Pechukas & Pollak, 1977; Pollak & Pechukas, 1978; Pechukas,
1981; Pollak, 1985], using periodic orbits, in Hamiltonian systems with two degrees of freedom. In Hamil-
tonian systems with three or more degrees of freedom, this method cannot be used since the periodic orbit
(1-dimensional object) does not have enough dimensions to guarantee the construction of a dividing sur-
face. This construction can be done using a higher dimensional object, the Normally Hyperbolic Invariant
Manifold -NHIM ([Wiggins, 1994; Wiggins et al., 2001; Uzer et al., 2002; Wiggins, 2016]). The dimension
1
June 1, 2021 13:0 katsanikas˙wiggins
2M. Katsanikas and S. Wiggins
of this object can guarantee the construction of an dividing surface [Waalkens et al., 2007; Waalkens &
Wiggins, 2010]. The computation of this structure can be carried out using normal form theory ([Wiggins
et al., 2001], [Uzer et al., 2002], [Waalkens et al., 2007],[Toda, 2003],[Komatsuzaki & Berry, 2003]).
The computation of the NHIM is very difficult in many cases and it requires extensive computations.
There is the need for a method of constructing dividing surfaces using as starting point a lower dimension
object, like a periodic orbit, that is more computationally efficient. For this reason in paper I we generalized
the classical method of periodic orbit dividing surfaces of [Pechukas, 1981; Pollak, 1985] in Hamiltonian
systems with three and more degrees of freedom. This was done for the first time using as a starting point
a periodic orbit. The method in paper I has one necessary condition in order to be applied. This condition
is that the projection of the periodic orbit into a 2Dsubspace of the phase space is a closed curve. In this
paper, we present a method that is based on the method that is constructed in paper I but it does not
require this condition. This means that this method can be applied in all cases of Hamiltonian systems
with ndegrees of freedom. The basic concept of this method is that starting from a projection of a periodic
orbit we construct an object from the Cartesian product of the projection of the periodic orbit with n2
circles in the configuration space. Then we create n1 additional segments using n1 momenta and we
obtain the last momentum from the Hamiltonian. The pseudocode in Fig.1 describes this construction in
Hamiltonian systems with ndegrees of freedom.
In this paper, we give an introduction (section 1) to the new method of constructing periodic orbit
dividing surfaces in Hamiltonian systems with three and more degrees of freedom. Then we give the
description of the algorithm for Hamiltonian systems with nand three degrees of freedom (see sections
2 and 3). In section 4 we apply our algorithm to a Hamiltonian system with three degrees of freedom
(quadratic normal form Hamiltonian system with three degrees of freedom) in which we have analytical
expressions for the NHIM and periodic orbits [Ezra & Wiggins, 2018] in order to compare the periodic
orbit dividing surface that is constructed by our method with the dividing surface that are constructed
using the NHIM. In section 5 we show that the algorithm becomes exactly the same with the classical
method of [Pechukas, 1981; Pollak, 1985] in Hamiltonian systems with two degrees of freedom. In the final
section, we present our conclusions.
2. The Algorithm for Hamiltonian systems with ndegrees of freedom
In this section we present our algorithm for the general case of Hamiltonian systems with n degrees of
freedom having a potential energy function V(x1, x2, ..., xn) with n2 of the form:
T+V(x1, x2, ..., xn) = E
(1)
where Tis the kinetic energy and Eis the numerical value of the Hamiltonian (we will refer to it as
”energy”).
T=p2
x1/2m1+p2
x2/2m2+... +p2
xn/2mn
(2)
This algorithm requires only the projection of a periodic orbit in a 2D subspace of the configuration
space. This method is not dependent on the morphology of the periodic orbits in the 2D subspaces of the
configuration space as in the algorithm that is presented in paper I [Katsanikas & Wiggins, 2021].
The algorithm is :
(1) Locate an unstable periodic orbit PO for a fixed value of Energy E.
(2) Project the PO into a 2D subspace of the configuration space (for example in the (x1, x2) space).
(3) From the projection of the periodic orbit into the configuration space, we construct a torus or a cylinder
that is generated by the Cartesian product of n2 circles with small radius and the projection of
the periodic orbit in a 2D subspace of the configuration space (for example in the (x1, x2) space). If
June 1, 2021 13:0 katsanikas˙wiggins
The Generalization of the Periodic Orbit Dividing Surface 3
the projection of the periodic orbit is a circle in the 2D subspace of the configuration space the above
structure will be topologically equivalent to the Cartesian product of n1 circles S1×S1×S1×...×S1.
This is a n1-dimensional torus. If the projection of the periodic orbit is a line or curve the above
structure will be topologically equivalent to the Cartesian product of a line or curve with n2 circles
R×S1×S1×S1×... ×S1. This is a n1-dimensional cylinder.This structure (in both of the cases)
can be achieved through the construction of one circle around every point of the periodic orbit in a
2D subspace of the configuration space. For example we compute a circle (with a fixed radius r) in
the plane (x2, x3) around every point of the periodic orbit in the 2D subspace of the nD configuration
space (x1, x2, ..., xn). Then we construct a new circle around every point of the previous structure in
other 2D subspace of the nD configuration space (x1, ..., xn). This can be done by constructing a circle
(with a fixed radius r) in the plane (x2, x4). Then we continue adding circles until we have added n2
circles to the initial projection of the periodic orbit. The goal of this step is to include all coordinates
of the configuration space in the construction of this object.
x2,1,i,j1=x2,0,i +rcos(θj1)
x3,1,i,j1=x3,0,i +rsin(θj1)
x1,1,i,j1=x1,0,i
x4,1,i,j1=x4,0,i
...
xn,1,i,j1=xn,0,i
(3)
x2,2,i,j1,j 2=x2,1,i,j1+rcos(θj2)
x4,2,i,j1,j 2=x4,1,i,j1+rsin(θj2)
x1,2,i,j1,j 2=x1,1,i,j1
x3,2,i,j1,j 2=x3,1,i,j1
xn,2,i,j1,j 2=xn,1,i,j1
... (4)
...
x2,n2,i,j1,j 2,...,j(n2) =x2,n3,i,j1,j2,...,j(n3) +rcos(θj(n2))
xn,n2,i,j1,j 2...j(n2) =xn,n3,i,j1,j2,...,j(n3) +rsin(θj(n2))
x1,n2,i,j1,j 2,...j(n2) =x1,n3,i,j1,j2,...,j(n3)
...
xn1,n2,i,j1,j 2,...,j(n2) =xn1,n3,1,i,j1,j2,...,j(n3)
(5)
(x1,0,i, x2,0,i , ..., xn,0,i), i = 1, ...N are the points of the periodic orbit in the nD configuration space
(x1, x2, ..., xn). We have the angle θj1=j12π
n1with j1 = 1, ..., n1for the first circle and θj2=j22
n1
with j2 = 1, ..., n1for the second circle and so on with θj(n2) =j(n2)2π
n1with j(n2) = 1, ..., n1
for the n2 circle that we need for the construction of the dividing surface.
x1,1,i,j1, x2,1,i,j 1, ..., xn,1,i,j1with i= 1, ..., N and j1=1, ..., n1are the points of the torus or cylinder that
is constructed from the Cartesian product of the projection of the periodic orbit into the 2D subspace
(x1, x2) and a circle in the (x2, x3) space in the nD space (x1, x2, ...xn). x1,2,i,j1,j 2, x2,2,i,j1,j2, ...xn,2,i,j1,j2
with i= 1, ..., N ,j1=1, ..., n1and j2=1, ..., n1are the points of the torus or cylinder that is
June 1, 2021 13:0 katsanikas˙wiggins
4M. Katsanikas and S. Wiggins
constructed from the Cartesian product of the projection of the periodic orbit in the 2D subspace
(x1, x2), and 2 circles in 2D subspaces of the configuration space in the nD space (x1, x2, ..., xn). And so
on x1,n2,i,j1,j 2,...j(n2), x2,n2,i,j1,j2,...j(n2), ...xn,n2,i,j 1,j2,..j (n2) with i= 1, ..., N and j1, j2, ....j(n
2) = 1, ..., n1are the points of the torus or cylinder that is constructed from the Cartesian product of
the projection of the periodic orbit in the 2D subspace (x1, x2), and other n2 circles in 2D subspaces
of the configuration space in the nD space (x1, x2, ..., xn).
(4) For each point x1,n2,i,j 1,j2,...j(n2), x2,n2,i,j1,j2,...j(n2) , ...xn,n2,i,j1,j 2,..j(n2) with i= 1, ..., N and
j1, j2, ....j (n2) = 1, ..., n1on this torus or cylinder we must calculate the pmax
x1,n2,i,j1,j 2,,...j(n2)
and pmin
x1,n2,i,j1,j 2,,...j(n2) by solving the following equation for a fixed value of energy Ewith
px2=px3=... =pxn= 0:
V(x1,n2,i,j1,j 2,...j(n2), x2,n2,i,j1,j2,...j(n2), ...xn,n2,i,j 1,j2,..j (n2)) +
p2
x1,n2,i,j1,j 2,...j(n2)
2m1
=E
(6)
and we find the maximum and minimum values
pmax
x1,n2,i,j1,j 2,...j(n2) and pmin
x1,n2,i,j1,j 2,...j(n2). We choose points px1,n2,i,j1,j 2,...j(n2) with j1, j 2...j(n
2) = 1, ..., n1in the interval pmin
x1,n2,i,j1,j 2,...j(n2) px1,n2,i,j1,j2,...j(n2) pmax
x1,n2,i,j1,j 2,...j(n2). These
points can be uniformly distributed in this interval. We will repeat the same procedure to compute
the values px2,n2,i,j1,j2,...j(n2), ..., pxn1,n1,i,j1,j 2,...j(n2) . In general for n2n1 for each point
x1,n2,i,j1,j 2,...j(n2), x2,n2,i,j1,j2,...j(n2), ...xn,n2,i,j 1,j2,..j (n2), px1,n2,i,j 1,j2,...j (n2), ...
pxn21,n2,i,j1,j 2,...j(n2) with i= 1, ..., N and j1, j2, ....j(n2) = 1, ..., n1we must calculate the
pmax
xn2,n2,i,j1,j 2,,...j(n2) and pmin
xn2,n2,i,j1,j 2,,...j(n2) by solving the following equation for a fixed value
of energy Ewith pxn2+1 =... =pxn= 0:
V(x1,n2,i,j1,j 2,...j(n2), x2,n2,i,j1,j2,...j(n2), ...xn,n2,i,j 1,j2,..j (n2)) +
p2
x1,n2,i,j1,j 2,...j(n2)
2m1
+... +p2
xn2,n2,i,j1,j 2,...j(n2)
2mn2
=E
(7)
and we find the maximum and minimum values pmax
xn2,n2,i,j1,j 2,...j(n2) and pmin
xn2,n2,i,j1,j 2,...j(n2).
We choose points pxn2,n2,i,j1,j2,...j(n2) with j1, j 2, j(n2) = 1, ..., n1in the interval
pmin
xn2,n2,i,j1,j 2,...j(n2) pxn2,n2,i,j1,j2,...j(n2) pmax
xn2,n2,i,j1,j 2,...j(n2). These points can be uniformly
distributed in this interval.
Then we obtain the value pxn,n2,i,j1,j2,...j(n2) from the Hamiltonian:
V(x1,n2,i,j1,j 2,...j(n2), x2,n2,i,j1,j2,...j(n2), ...xn,n2,i,j 1,j2,..j (n2)) +
p2
x1,n2,i,j1,j 2,...j(n2)
2m1
+... +p2
xn,n2,i,j1,j 2,...j(n2)
2mn
=E
(8)
Dimensionality and Topology: This algorithm constructs a torus or cylinder as the product of the projection
of the periodic orbit ( a curve or a line or a closed curve) in a 2D subspace of the configuration space with
n2 circles in the nD configuration space. This structure is a n1-dimensional torus or cylinder. Then we
sample the n1 variables (n1 momenta) in the interval between their maximum and minimum value.
Actually, we create n1 additional segments and we increase the dimensionality of the initial object, from
n1 to 2n2 dimensions, which is embedded in the 2n1 dimensional energy surface. Then we obtain
the value of the last momenta from the Hamiltonian of the system.
June 1, 2021 13:0 katsanikas˙wiggins
The Generalization of the Periodic Orbit Dividing Surface 5
3. The Algorithm for Hamiltonian systems with three degrees of freedom
In this section, we present our algorithm for a Hamiltonian system with three degrees of freedom with
momenta px, py, pz, potential V(x, y, z) and the corresponding masses m1, m2, m3:
p2
x/2m1+p2
y/2m2+p2
z/2m3+V(x, y, z) = E
(9)
Eis the numerical value of the Hamiltonian (we call it as energy).
The algorithm is:
(1) Locate an unstable periodic orbit PO for a fixed value of energy E.
(2) Project the PO into the configuration space and we consider the projection of the periodic orbit in a
2D subspace of the configuration space (for example in the (x, y) space).
(3) We construct a torus or a cylinder that is generated by the Cartesian product of one circle with small
radius and the projection of the periodic orbit in a 2D subspace of the phase space (for example in
the (y, py) space). Actually it is the Cartesian product of two circles S1×S1or a line (or curve)
with one circle R×S1. This is a two-dimensional torus or cylinder. This can be achieved through
the construction of one circle around every point of the periodic orbit in the 2D subspace of the
configuration space. For example we compute a circle (with a fixed radius r) in the plane (y, z) around
every point of the periodic orbit in the 2D subspace of the 3D space (x, y, z).
The points of the torus or cylinder that we constructed are:
y1,i,j1=y0,i +rcos(θj1)
z1,i,j1=z0,i +rsin(θj1)
x1,i,j1=x0,i (10)
(x0,i, y0,i , z0,i), i = 1, ...N are the points of the periodic orbit in the 3D configuration space (x, y, z).
We have the angle θj1=j12π
n1with j1 = 1, ..., n1for the circle that we need for the construction of the
dividing surface.
x1,i,j1, y1,i,j 1, z1,i,j1with i= 1, ..., N and j1 = 1, ..., n1are the points of the torus or cylinder that is
constructed from the Cartesian product of projection of the periodic orbit in the 2D subspace (x, y)
and a circle in the (y, z) space of the 3D space (x, y, z).
(4) For each point x1,i,j1, y1,i,j 1, z1,i,j1on this torus or cylinder we must calculate the pmax
x,1,i,j1and pmin
x,1,i,j1
by solving the following equation for a fixed value of energy Ewith py=pz= 0:
V(x1,i,j1, y1,i,j 1, z1,i,j1) + p2
x,1,i,j1
2m1
=E
(11)
and we find the maximum and minimum values pmax
x,1,i,j1and pmin
x,1,i,j1. We choose points px,1,i,j1with
j1=1, ..., n1in the interval pmin
x,1,i,j1px,1,i,j 1pmax
x,1,i,j1. These points can be uniformly distributed in
this interval.
(5) Now for every point x1,i,j1, y1,i,j1, z1,i,j1, px,1,i,j1we must calculate the pmax
y,1,i,j1and pmin
y,1,i,j1by solving
the following equation for a fixed value of energy Ewith pz= 0:
V(x1,i,j1, y1,i,j 1, z1,i,j1) + p2
x,1,i,j1
2m1
+p2
y,1,i,j1
2m2
=E
(12)
We choose points py,1,i,j 1with j1 = 1, ..., n1in the interval pmin
y,1,i,j1py ,1,i,j1pmax
y,1,i,j1. These points
can be uniformly distributed in this interval. Then we obtain the value pz,1,i,j1from the Hamiltonian:
June 1, 2021 13:0 katsanikas˙wiggins
6M. Katsanikas and S. Wiggins
V(x1,i,j1, y1,i,j 1, z1,i,j1) + p2
x,1,i,j1
2m1
+p2
y,1,i,j1
2m2
+p2
z,1,i,j1
2m3
=E
(13)
Dimensionality and Topology: This algorithm constructs a torus or a cylinder as the product of the
projection of the periodic orbit (1D object) in a 2D subspace with one circle in the configuration space.
This object is a 2-dimensional torus or cylinder. Then we sample the fourth variable (one of the momenta)
in the interval between its maximum and minimum value. Actually we create an additional 1D segment
and we increase the dimensionality of the initial object, from 2 to 3 dimensions, which is embedded in the
4D subspace of the 5D energy surface. Then we sample the fifth variable (one of the other two momenta)
in the interval between its maximum and minimum value. This means that we create an additional 1D
segment and we increase the dimensionality of the initial object, from 3 to 4 dimensions, which is embedded
in the 5D energy surface. Then we obtain the value of the last momentum from the Hamiltonian of the
system.
4. Application of the Algorithm in the Quadratic Normal Form Hamiltonian
System with Three Degrees of Freedom
In this section we will use a benchmark example in order to show how to apply our algorithm to Hamiltonian
systems with three degrees of freedom. We choose the quadratic normal form (NF) Hamiltonian system
with three degrees of freedom. We did this because we have analytical formulas for the NHIM and we can
compare our results from the construction of the dividing surfaces from periodic orbits with the dividing
surfaces from the NHIM. This system [Wiggins, 2016] is described by the following Hamiltonian:
H=λ
2(p2
xx2) + ω2
2(p2
y+y2) + ω3
2(p2
z+z2)
(14)
with λ > 0, ω2>0, ω3>0 and
H1=λ
2(p2
xx2),
H2=ω2
2(p2
y+y2),
H3=ω3
2(p2
z+z2).
(15)
The following equations are the equations of motion of the system:
June 1, 2021 13:0 katsanikas˙wiggins
The Generalization of the Periodic Orbit Dividing Surface 7
˙x=∂H
∂px
=λpx,(16)
˙px=∂H
∂x =λx, (17)
˙y=∂H
∂py
=ω2py,(18)
˙py=∂H
∂y =ω2y, (19)
˙z=∂H
∂pz
=ω3pz,(20)
˙pz=∂H
∂z =ω3z.
(21)
This system is composed of three subsystems that are described by the uncoupled Hamiltonians H1,H2
and H3. There is an index-1 saddle (x, px, y, py, z, pz) = (0,0,0,0,0,0)) for energy (numerical value of the
Hamiltonian) E= 0. We consider that the reaction occurs when xchanges sign [Ezra & Wiggins, 2018]
(x= 0). This condition will be applied in our algorithm.
The analytical formula for the NHIM is ([Ezra & Wiggins, 2018]):
ω2
2(p2
y+y2) + ω3
2(p2
z+z2) = E, N HIM
(22)
and the analytical formula for the dividing surface (a four-sphere) from the NHIM is (see [Ezra & Wiggins,
2018]):
λ
2p2
x+ω2
2(p2
y+y2) + ω3
2(p2
z+z2) = E.
(23)
The analytical expressions for the periodic orbits PO1 and P02 are the following ([Katsanikas &
Wiggins, 2021]):
ω2
2(p2
y+y2) = E, P O1
(24)
ω3
2(p2
z+z2) = E. P O2
(25)
The periodic orbits PO1 and PO2 are circles in the planes (y, py) and (z, pz) respectively.
We constructed, using our algorithm, the dividing surfaces from PO1 (see subsection 4.1) and PO2 (see
subsection 4.2). Then we compared our results with the dividing surface from the NHIM (see subsection
4.3).
June 1, 2021 13:0 katsanikas˙wiggins
8M. Katsanikas and S. Wiggins
4.1. PO1-Dividing Surface
First we apply our algorithm to PO1 :
(1) The PO1 is given by 24 for every fixed value E.
(2) The periodic orbit is a circle and it lies in a plane (y, py). The radius of this circle is q2E
ω2. This
means that (with x= 0) the projection of the periodic orbit in the configuration space is a line (with
x=z= 0) and ytakes values from q2E
ω2to q2E
ω2.
(3) In this step the algorithm is simplified since we have x=z= 0 and we do not have to construct any
torus or cylinder in order to have all coordinates of the configuration space in this structure.
(4) Step 4 is carried out easily in this case (with x= 0). We compute the pmax
yand pmin
y. We sample points
in the interval [pmin
y, pmax
y].
(5) Step 5 is carried out easily in this case (with x= 0). We compute the pmax
zand pmin
z. We sample points
in the interval [pmin
z, pmax
z]. For every point in the previous interval we obtain the pxcoordinate from
the Hamiltonian.
No-recrossing Property:
From the equation (14) (for a fixed value of energy E, the numerical value of the Hamiltonian) we have
(using step 2 of the algorithm (x=z= 0)):
λ
2p2
x=Eω2
2(p2
y+y2)ω3
2(p2
z)
(26)
The equation (26) using that E=H1+H2+H3with H2=ω2
2(p2
y+y2) (from equation (15)) we have:
λ
2p2
x=H1+H3ω3
2p2
z
(27)
From equation (15) we have that H3ω3
2p2
z>0 and H1>0 (with x= 0). Then we have for the
dividing surface :
px=r2
λ(H1+H3ω3
2p2
z)px>0F orwar d DS
px=r2
λ(H1+H3ω3
2p2
z)px<0Backward DS
(28)
The new DS that is constructed has the no-recrossing property since ˙x=λpx.
4.2. PO2-Dividing Surface
We now apply our algorithm to PO2 :
(1) The PO2 is given by 24 for every fixed value E.
(2) The periodic orbit is a circle and it lies on a plane (z, pz). The radius of this circle is q2E
ω3. This
means that (with x= 0) the projection of the periodic orbit in the configuration space is a line (with
x=y= 0) and ztakes values from q2E
ω3to q2E
ω3.
(3) In this step the algorithm is simplified since we have x=y= 0 and we do not have to construct any
torus or cylinder in order to have all coordinates of the configuration space in this structure.
June 1, 2021 13:0 katsanikas˙wiggins
The Generalization of the Periodic Orbit Dividing Surface 9
(4) Step 4 is carried out naturally in this case (with x= 0). We compute pmax
yand pmin
y. We sample points
in the interval [pmin
y, pmax
y].
(5) Step 5 is carried out naturally in this case (with x= 0). We compute pmax
zand pmin
z. We sample points
in the interval [pmin
z, pmax
z]. For every point in the previous interval we obtain the pxcoordinate from
the Hamiltonian.
No-recrossing Property:
from the equation (14) (for a fixed value of energy E, the numerical value of the Hamiltonian) we have
(using step 2 of the algorithm (x=y= 0)):
λ
2p2
x=Eω2
2(p2
y)ω3
2(p2
z+z2)
(29)
Frome equation (29) using that E=H1+H2+H3with H3=ω3
2(p2
z+z2) (from equation (15)) we
have:
λ
2p2
x=H1+H2ω2
2p2
y
(30)
From equation 15 we have that H2ω2
2p2
y>0 and H1>0 (with x= 0). Then the expression for the
dividing surface is:
px=r2
λ(H1+H2ω2
2p2
y)px>0, F orward DS,
px=r2
λ(H1+H2ω2
2p2
y)px<0, Backward DS.
(31)
The DS that is constructed has the no-recrossing property since ˙x=λpx.
4.3. The structure and comparison of dividing surfaces
We have constructed the dividing surfaces from the periodic orbits PO1 and PO2 using our algorithm
and we now compare them with the dividing surface constructed from the normally hyperbolic invariant
manifold (NHIM) of the quadratic normal form Hamiltonian for λ= 1, ω2=2, ω3= 1. These values
were used in [Ezra & Wiggins, 2018], with the value of the energy E= 14, H1= 4. We computed the
dividing surfaces from the periodic orbits PO1 and PO2 using the algorithms and analytical formulas of
the previous section (see subsections 4.1 and 4.2). The dividing surface from the NHIM is obtained using
the algorithm and analytical formulas from ([Ezra & Wiggins, 2018] - see above in the introduction of this
section).
All dividing surfaces have x= 0 (as we mentioned above in this section and we obtain the pxcoordinate
from the Hamiltonian) and this means that the dividing surfaces are 3-dimensional embedded in the 4-
dimensional space (y, z, py, pz).
The dividing surfaces from PO1 and PO2 have a similar ellipsoidal structure (see for example Fig. 4)
similar to the dividing surface from the NHIM (see [Katsanikas & Wiggins, 2021]). The only difference is
that the dividing surface from PO1 is elongated only in the y-direction and the dividing surface from PO2
is elongated only in the z-direction (see Fig. 2). The range of values of the dividing surfaces from PO1
and PO2 is smaller in the y-direction (for the case of the dividing surface from PO1) or smaller in the
z-direction (for the case of the dividing surface from PO2) than the range of values of the dividing surface
from the NHIM (see Fig. 3). This means that the dividing surface from PO1 and PO2 are subsets of the
dividing surface from the NHIM.
June 1, 2021 13:0 katsanikas˙wiggins
10 M. Katsanikas and S. Wiggins
Fig. 1. The pseudocode of our algorithm.
Fig. 2. The 2D projections of the dividing surfaces that are constructed from the PO1 (first row) and PO2 (second row)
using our algorithm in (y, z) (first column), (y , py) (second column) and (z, pz) (third column) subspaces of the phase space.
June 1, 2021 13:0 katsanikas˙wiggins
The Generalization of the Periodic Orbit Dividing Surface 11
Fig. 3. 2D projections of dividing surface that is constructed from the NHIM in (y , z) (first panel), (y, py) (second panel)
and (z, pz) (third panel) subspaces of the phase space.
Fig. 4. The 3D projection (y , py, pz) of the dividing surface which is constructed from the periodic orbit PO1 using our
algorithm. The color indicates the values of the third dimension.The viewpoint is in spherical coordinates is (45o,30o).
5. The Algorithm for Hamiltonian systems with two degrees of freedom
In this section we show that for two degrees of freedom Hamiltonian systems our algorithm coincides with
the classical periodic orbit dividing surface (PODS) construction given in [Pechukas & McLafferty, 1973;
Pechukas & Pollak, 1977; Pollak & Pechukas, 1978; Pechukas & Pollak, 1979; Pollak, 1985]. In particular,
we consider a Hamiltonian system with two degrees of freedom with momenta px, py, potential V(x, y) and
the corresponding masses m1, m2:
p2
x/2m1+p2
y/2m2+V(x, y) = E,
(32)
where Eis the numerical value of the Hamiltonian (which we refer to as energy).
For this a system in this for our algorithm has the form:
(1) Locate an unstable periodic orbit PO for a fixed value of energy E.
(2) (x0,i, y0,i ), i = 1, ...N are the points of the periodic orbit in the 2D configuration space (x, y). This is
a closed curve or a line or a curve in a 2D subspace. It is an 1-dimensional object.
June 1, 2021 13:0 katsanikas˙wiggins
12 M. Katsanikas and S. Wiggins
(3) For each point x0,i , y1,i of the periodic orbit we must calculate the pmax
x,0,i and pmin
x,0,i by solving the
following equation for a fixed value of energy (numerical value of Hamiltonian) Ewith py= 0:
V(x0,i, y0,i ) + p2
x,0,i
2m1
=E,
(33)
and we find the maximum and minimum values pmax
x,0,i and pmin
x,0,i. We choose points px,0,i in the interval
pmin
x,0,i px,0,i pmax
x,0,i. These points can be uniformly distributed in this interval.
(4) Now for every point x0,i, y0,i, px,0,i we must calculate the py,0,i by solving the following equation for a
fixed value of energy E:
V(x0,i, y0,i ) + p2
x,0,i
2m1
+p2
y,0,i
2m2
=E.
(34)
Dimensionality and Topology: This algorithm give us an 1-dimensional object (a circle or ellipse or a line)
as the projection of the periodic orbit (1D object) in the configuration space. Then we sample the third
variable (one of the momenta) in the interval between its maximum and minimum value. Actually we
create an additional 1D segment and we increase the dimensionality of the initial object (a circle or ellipse
or a line), from 1 to 2 dimensions, which is embedded in the 3D energy surface. Then we obtain the value
of the last momentum from the Hamiltonian of the system.
Hence, our algorithm coincides with the classical algorithm for the construction of the dividing surfaces
(see [Pechukas & McLafferty, 1973; Pechukas & Pollak, 1977; Pollak & Pechukas, 1978; Pechukas & Pollak,
1979; Pollak, 1985] and for more details see [Ezra & Wiggins, 2018]) for Hamiltonian systems with two
degrees of freedom.
6. Conclusions
In this paper we have described a second method (the first method was described in paper I - [Katsanikas
& Wiggins, 2021]) of constructing dividing surfaces from periodic orbits in Hamiltonian systems with
three or more degrees of freedom. This method generalizes the classical method of [Pechukas, 1981; Pollak,
1985] that is valid only for Hamiltonian systems with two degrees of freedom. It also avoids the difficult
computation of the NHIM. Furthermore, this method does not require the necessary conditions of the
first method (see paper I -[Katsanikas & Wiggins, 2021]) and can be used in all cases for periodic orbits
in Hamiltonian systems with three or more degrees of freedom. From this study we have the following
remarks:
(1) The algorithm of this paper does not have the restriction of the first method, that is presented in the
paper I, for the periodic orbits. This means that we don’t have the restriction for the periodic orbits
to be closed curves in a 2D subspace of the phase space.
(2) The dividing surfaces that are constructed from the periodic orbits are subsets of the dividing surfaces
that are constructed from the NHIM.
(3) The algorithm of our method becomes identical to the algorithm of the classical method of [Pechukas,
1981; Pollak, 1985] in Hamiltonian systems with two degrees of freedom.
(4) The periodic orbit dividing surfaces, that are constructed using the method of this paper, have the
same topology with the dividing surfaces that are constructed from the NHIM in Hamiltonian systems
with three degrees of freedom.
(5) The periodic orbit dividing surfaces, that are constructed using the method of this paper, give us
information for the trajectory behavior in different regions of the phase space according to the position
of the periodic orbits. In our example (a normal form Hamiltonian system with three degrees of
June 1, 2021 13:0 katsanikas˙wiggins
REFERENCES 13
freedom) the PO1 dividing surface give us more information for the trajectories in the y-direction and
PO2 dividing surface give us more information in the z-direction.
Acknowledgments
We acknowledge the support of EPSRC Grant No. EP/P021123/1 and ONR Grant No. N00014-01-1-
0769.
References
Ezra, G. S. & Wiggins, S. [2018] “Sampling phase space dividing surfaces constructed from Normally
Hyperbolic Invariant Manifolds (NHIMs),” The Journal of Physical Chemistry A 122, 8354–8362.
Katsanikas, M. & Wiggins, S. [2021] “The generalization of the periodic orbit dividing surface for Hamilto-
nian systems with three or more degrees of freedom in chemical reaction dynamics - I,” International
Journal of Bifurcation and Chaos , in press.
Komatsuzaki, T. & Berry, R. S. [2003] “Chemical Reaction Dynamics: Many-body chaos and regularity,”
Adv. Chem. Phys. , 79–152.
Pechukas, P. [1981] “Transition state theory,” Annual Review of Physical Chemistry 32, 159–177.
Pechukas, P. & McLafferty, F. J. [1973] “On transition-state theory and the classical mechanics of collinear
collisions,” The Journal of Chemical Physics 58, 1622–1625.
Pechukas, P. & Pollak, E. [1977] “Trapped trajectories at the boundary of reactivity bands in molecular
collisions,” The Journal of Chemical Physics 67, 5976–5977.
Pechukas, P. & Pollak, E. [1979] “Classical transition state theory is exact if the transition state is unique,”
The Journal of Chemical Physics 71, 2062–2068.
Pollak, E. [1985] “Periodic orbits and the theory of reactive scattering,” Theory of Chemical Reaction
Dynamics 3, 123.
Pollak, E. & Pechukas, P. [1978] “Transition states, trapped trajectories, and classical bound states em-
bedded in the continuum,” The Journal of Chemical Physics 69, 1218–1226.
Toda, M. [2003] “Dynamics of chemical reactions and chaos,” Adv. Chem. Phys. 123, 153–198.
Uzer, T., Jaff´e, C., Palaci´an, J., Yanguas, P. & Wiggins, S. [2002] “The geometry of reaction dynamics,”
nonlinearity 15, 957.
Waalkens, H., Schubert, R. & Wiggins, S. [2007] “Wigner’s dynamical transition state theory in phase
space: classical and quantum,” Nonlinearity 21, R1.
Waalkens, H. & Wiggins, S. [2010] “Geometrical models of the phase space structures governing reaction
dynamics,” Regular and Chaotic dynamics 15, 1–39.
Wiggins, S. [1994] Normally Hyperbolic Invariant Manifolds in dynamical systems (springer verlag).
Wiggins, S. [2016] “The role of Normally Hyperbolic Invariant Manifolds (NHIMS) in the context of the
phase space setting for chemical reaction dynamics,” Regular and Chaotic Dynamics 21, 621–638.
Wiggins, S., Wiesenfeld, L., Jaff´e, C. & Uzer, T. [2001] “Impenetrable barriers in phase-space,” Physical
Review Letters 86, 5478.
Wigner, E. [1938] “The transition state method,” Transactions of the Faraday Society 34, 29–41.
... This paper expands the concept of periodic orbit dividing surfaces within rotating Hamiltonian systems possessing three degrees of freedom. Initially, we detail the implementation of our second method for constructing these surfaces, as outlined in [Katsanikas & Wiggins, 2021b, 2023b, for such systems. Subsequently, we analyze the configuration of these surfaces within a rotating quadratic normal-form Hamiltonian system characterized by three degrees of freedom. ...
... This technique is designed for Hamiltonian systems with three degrees of freedom, particularly focusing on rotating Hamiltonian systems. The approach initially proposed for non-rotating systems is further developed based on the work by Katsanikas et al. [Katsanikas & Wiggins, 2021b, 2023b. ...
... This Hamiltonian describes a broad scenario of rotating Hamiltonian system with three degrees of freedom. The inclusion of the term −Ω b (xp y − yp x ) complicates the direct application of the algorithm proposed for constructing periodic orbit dividing surfaces, as outlined in [Katsanikas & Wiggins, 2021b, 2023b. In a previous paper [Katsanikas & Wiggins, 2024d], we redefined this Hamiltonian to eliminate this term. ...
Article
Full-text available
This paper expands the concept of periodic orbit dividing surfaces within rotating Hamiltonian systems possessing three degrees of freedom. Initially, we detail the implementation of our second method for constructing these surfaces, as outlined in [Katsanikas & Wiggins, 2021b, 2023b], for such systems. Subsequently, we analyze the configuration of these surfaces within a rotating quadratic normal-form Hamiltonian system characterized by three degrees of freedom.
... In our previous works, we developed two innovative approaches that bypass the need to compute NHIMs by utilizing unstable periodic orbits instead (see [Katsanikas & Wiggins, 2021a, 2021b, 2023a, 2023bGonzalez Montoya et al., 2024a). These methods provide an alternative to construct dividing surfaces in the phase space of Hamiltonian systems with three or more degrees of freedom. ...
Article
Full-text available
In our earlier research [Katsanikas & Wiggins, 2021a, 2021b, 2023a, 2023b, 2024a, 2024b, 2024c], we developed two new approaches for building up dividing surfaces in the phase space of Hamiltonian systems with three or more degrees of freedom. These surfaces were derived either from periodic orbits or from 2D or 3D generating surfaces in the phase space. Our previous work extended the realization of these dividing surfaces into more intricate forms, such as tori or cylinders, situated within the constant energy manifold of the Hamiltonian system. In those studies, we utilized the above-mentioned surfaces in the setting of a three-degrees-of-freedom quadratic normal form Hamiltonian system. This series of papers extends our findings to 3D generating surfaces for a three-degrees-of-freedom quartic normal form Hamiltonian system. The focus of this paper is to introduce the first method for constructing 3D generating surfaces.
... In our earlier studies, we introduced two novel methods that circumvent the need to compute NHIMs by employing periodic orbits instead [Katsanikas & Wiggins, 2021a, 2021b, 2023a, 2023bGonzalez Montoya et al., 2024a. These methods offer an alternative approach for identifying dividing surfaces in Hamiltonian systems. ...
Article
Full-text available
In our previous studies [Katsanikas & Wiggins, 2021a, 2021b, 2023a, 2023b, 2024a, 2024b, 2024c], we presented two methods for building up dividing surfaces based on either periodic orbits or 2D/3D generating surfaces, specifically for Hamiltonian systems with three or more degrees of freedom. These papers extended these dividing surface constructions to allow for more complex forms, such as tori or cylinders, embedded within the energy surface of the Hamiltonian system. These studies were applied to a quadratic normal form Hamiltonian system with three degrees of freedom. This series of papers extends our findings to 3D generating surfaces for three degrees of freedom quartic Hamiltonian systems. This paper focuses on the second approach for constructing these 3D generating surfaces.
Article
Full-text available
In earlier research, we developed two techniques designed to expand the construction of a periodic orbit dividing surface for Hamiltonian systems with three or more degrees of freedom. Our methodology involved transforming a periodic orbit into a torus or cylinder, thereby elevating it to a higher-dimensional structure within the energy surface (refer to [Katsanikas & Wiggins, 2021a, 2021b, 2023a, 2023b]). Recently, we introduced two new methods for creating dividing surfaces, which do not rely on periodic orbits. Instead, we used 2D surfaces (geometric entities) or 3D surfaces in a Hamiltonian system with three degrees of freedom (see [Katsanikas & Wiggins, 2024a, 2024b, 2024c]). In these studies, we applied these surfaces within a quadratic normal-form Hamiltonian system with three degrees of freedom. This series of two papers (this paper and [Katsanikas et al., 2024]) extends our results to 2D-generating surfaces for quartic Hamiltonian systems with three degrees of freedom. This paper focuses on presenting the second method of constructing 2D-generating surfaces.
Article
Full-text available
In previous studies, we developed two techniques aimed at expanding the scope of constructing a periodic orbit dividing surface within a Hamiltonian system with three or more degrees of freedom. Our approach involved extending a periodic orbit into a torus or cylinder, thereby elevating it into a higher-dimensional entity within the energy surface (see [Katsanikas & Wiggins, 2021a, 2021b, 2023a, 2023b]). Recently, we introduced two alternative methods for creating dividing surfaces, distinct from the utilization of periodic orbits, by employing 2D surfaces (geometric entities) or 3D surfaces within a Hamiltonian system with three degrees of freedom (refer to [Katsanikas & Wiggins, 2024a, 2024b, 2024c]). In these studies, we applied these surfaces in a quadratic normal form Hamiltonian system with three degrees of freedom. In this series of two papers, we extend our results to 2D generating surfaces for quartic Hamiltonian systems with three degrees of freedom. This paper presents the first method of constructing 2D generating surfaces.
Article
Full-text available
In this paper, we extend the notion of periodic orbit-dividing surfaces (PODSs) to rotating Hamiltonian systems with three degrees of freedom. First, we present how to apply our first method for the construction of PODSs [Katsanikas & Wiggins, 2021a, 2023a] to rotating Hamiltonian systems with three degrees of freedom. Then, we study the structure of these surfaces in a rotating quadratic normal-form Hamiltonian system with three degrees of freedom.
Article
Full-text available
In prior studies [Katsanikas & Wiggins, 2021a, 2021b, 2023a, 2023b], we introduced two methodologies for constructing Periodic Orbit Dividing Surfaces (PODS) tailored specifically for Hamiltonian systems with three or more degrees of freedom. These approaches, as described in the aforementioned papers, were applied to a quadratic Hamiltonian system in its normal form with three degrees of freedom. Within this framework, we provide a more intricate geometric characterization of this entity within the family of 4D toratopes which elucidates the structure of the dividing surfaces discussed in these works. Our analysis affirmed the nature of this construction as a dividing surface with the property of no-recrossing. These insights were derived from analytical findings tailored to the Hamiltonian system discussed in these publications. In this series of papers, we extend our previous findings to quartic Hamiltonian systems with three degrees of freedom. We establish the no-recrossing property of the PODS for this class of Hamiltonian systems and explore their structural aspects. Additionally, we undertake the computation and examination of the PODS in a coupled scenario of quartic Hamiltonian systems with three degrees of freedom. In the initial paper [Gonzalez Montoya et al., 2024], we employed the first methodology for constructing PODS, while in this paper, we utilize the second methodology for the same purpose.
Article
Full-text available
In this paper, we extend the notion of periodic orbit-dividing surfaces (PODS) to rotating Hamiltonian systems with two degrees of freedom. First, we present a method that enables us to apply the classical algorithm for the construction of PODS [Pechukas & McLafferty, 1973; Pechukas, 1981; Pollak & Pechukas, 1978; Pollak, 1985] in rotating Hamiltonian systems with two degrees of freedom. Then we study the structure of these surfaces in a rotating quadratic normal-form Hamiltonian system with two degrees of freedom.
Article
Full-text available
In prior work [Katsanikas & Wiggins, 2021a, 2021b, 2023c, 2023d], we introduced two methodologies for constructing Periodic Orbit Dividing Surfaces (PODS) tailored for Hamiltonian systems possessing three or more degrees of freedom. The initial approach, outlined in [Katsanikas & Wiggins, 2021a, 2023c], was applied to a quadratic Hamiltonian system in normal form having three degrees of freedom. Within this context, we provided a more intricate geometric characterization of this object within the family of 4D toratopes that describe the structure of the dividing surfaces discussed in these papers. Our analysis confirmed the nature of this construction as a dividing surface with the no-recrossing property. All these findings were derived from analytical results specific to the case of the Hamiltonian system discussed in these papers. In this paper, we extend our results for quartic Hamiltonian systems with three degrees of freedom. We prove for this class of Hamiltonian systems the no-recrossing property of the PODS and we investigate the structure of these surfaces. In addition, we compute and study the PODS in a coupled case of quartic Hamiltonian systems with three degrees of freedom.
Article
Full-text available
We present a method that generalizes the periodic orbit dividing surface construction for Hamiltonian systems with three or more degrees of freedom. We construct a torus using as a basis a periodic orbit and we extend this to a (2n − 2)-dimensional object in the (2n − 1)-dimensional energy surface. We present our methods using benchmark examples for two and three degrees of freedom Hamiltonian systems to illustrate the corresponding algorithm for this construction. Towards this end, we use the normal form quadratic Hamiltonian system with two and three degrees of freedom. We found that the periodic orbit dividing surface can provide us the same dynamical information as the dividing surface constructed using normally hyperbolic invariant manifolds. This is significant because, in general, computations of normally hyperbolic invariant manifolds are very difficult in Hamiltonian systems with three or more degrees of freedom. However, our method avoids this computation and the only information that we need is the location of one periodic orbit.
Book
Full-text available
In the past ten years, there has been much progress in understanding the global dynamics of systems with several degrees-of-freedom. An important tool in these studies has been the theory of normally hyperbolic invariant manifolds and foliations of normally hyperbolic invariant manifolds. In recent years these techniques have been used for the development of global perturbation methods, the study of resonance phenomena in coupled oscillators, geometric singular perturbation theory, and the study of bursting phenomena in biological oscillators. "Invariant manifold theorems" have become standard tools for applied mathematicians, physicists, engineers, and virtually anyone working on nonlinear problems from a geometric viewpoint. In this book, the author gives a self-contained development of these ideas as well as proofs of the main theorems along the lines of the seminal works of Fenichel. In general, the Fenichel theory is very valuable for many applications, but it is not easy for people to get into from existing literature.
Article
Full-text available
Let N be a smooth manifold and f: N → N be a C ℓ , ℓ ⩾ 2 diffeomorphism. Let M be a normally hyperbolic invariant manifold, not necessarily compact. We prove an analogue of the λ-lemma in this case. Applications of this result are given in the context of normally hyperbolic invariant annuli or cylinders which are the basic pieces of all geometric mechanisms for diffusion in Hamiltonian systems. Moreover, we construct an explicit class of three-degree-of-freedom near-integrable Hamiltonian systems which satisfy our assumptions.
Article
Full-text available
The geometrical structures which regulate transformations in dynamical systems with three or more degrees of freedom (DOFs) form the subject of this paper. Our treatment focuses on the (2n − 3)-dimensional normally hyperbolic invariant manifold (NHIM) in nDOF systems associated with a centre × · · · × centre × saddle in the phase space flow in the (2n − 1)-dimensional energy surface. The NHIM bounds a (2n − 2)-dimensional surface, called a 'transition state' (TS) in chemical reaction dynamics, which partitions the energy surface into volumes characterized as 'before' and 'after' the transformation. This surface is the long-sought momentum-dependent TS beyond two DOFs. The (2n − 2)-dimensional stable and unstable manifolds associated with the (2n − 3)-dimensional NHIM are impenetrable barriers with the topology of multidimensional spherical cylinders. The phase flow interior to these spherical cylinders passes through the TS as the system undergoes its transformation. The phase flow exterior to these spherical cylinders is directed away from the TS and, consequently, will never undergo the transition. The explicit forms of these phase space barriers can be evaluated using normal form theory. Our treatment has the advantage of supplying a practical algorithm, and we demonstrate its use on a strongly coupled nonlinear Hamiltonian, the hydrogen atom in crossed electric and magnetic fields.
Article
Full-text available
We develop Wigner’s approach to a dynamical transition state theory in phase space in both the classical and quantum mechanical settings. The key to our development is the construction of a normal form for describing the dynamics locally in the neighborhood of a specific type of saddle point that governs the evolution from reactants to products in high dimensional systems. In the classical case this is just the standard Poincaré-Birkhoff normal form. In the quantum case we develop a version of the Poincaré-Birkhoff normal form for quantum systems and a new algorithm for computing this quantum normal form that follows the same steps as the algorithm for computing the classical normal form. The classical normal form allows us to discover and compute phase space structures that govern reaction dynamics. From this knowledge we are able to provide a direct construction of an energy dependent dividing surface in phase space having the properties that trajectories do not locally “re-cross ” the surface and the directional flux across the surface is minimal. Using this, we are able to give a formula for the directional flux that goes beyond the harmonic approximation. We relate this construction to the flux-flux autocorrelation function which is a standard ingredient in the expression for the reaction rate in the chemistry community. We also give a classical mechanical interpretation of the activated complex as a normally hyperbolic invariant manifold (NHIM), and further describe the NHIM in terms of a foliation by invariant tori. The quantum normal form allows us to understand the quantum mechanical significance of the classical phase space structures and quantities governing reaction dynamics. In particular
Article
In this paper we further investigate the construction of a phase space dividing surface (DS) from a normally hyperbolic invariant manifold (NHIM) and the sampling procedure for the resulting dividing surface described in earlier work \cite{mauguiere2016ozone}. Our discussion centers on the relationship between geometrical structures and dynamics for 2 DoF and 3 DoF systems, specifically, the construction of a DS from a NHIM. We show that, if the equation for the NHIM and associated DS is known (e.g., as obtained from Poincar\'e-Birkhoff normal form theory), then the numerical procedure described in \cite{mauguiere2016ozone} gives the same result as a sampling method based upon the explicit form of the NHIM. After describing the sampling procedure in a general context, it is applied to a quadratic Hamiltonian normal form near an index one saddle where explicit formulae exist for both the NHIM and the DS. It is shown for both 2 and 3 DoF systems that a version of the general sampling procedure provides points on the analytically defined DS with the correct microcanonical density on the constant energy DS. Excellent agreement is obtained between analytical and numerical averages of quadratic energy terms over the DS for a range of energies.
Article
In this paper we give an introduction to the notion of a normally hyperbolic invariant manifold (NHIM) and its role in chemical reaction dynamics.We do this by considering simple examples for one-, two-, and three-degree-of-freedom systems where explicit calculations can be carried out for all of the relevant geometrical structures and their properties can be explicitly understood. We specifically emphasize the notion of a NHIM as a “phase space concept”. In particular, we make the observation that the (phase space) NHIM plays the role of “carrying” the (configuration space) properties of a saddle point of the potential energy surface into phase space. We also consider an explicit example of a 2-degree-of-freedom system where a “global” dividing surface can be constructed using two index one saddles and one index two saddle. Such a dividing surface has arisen in several recent applications and, therefore, such a construction may be of wider interest.
Article
We consider classical transition‐state theory of collinear atom‐diatom reactions. There are (many) potential surfaces for which this theory is exact provided all trajectories with energy above some fixed value are disregarded; the energy cutoff of course depends on the surface. We develop a simple criterion for recognizing or constructing such surfaces, and discuss examples. We also show that if a surface has a proper transition state, as defined below, then transition‐state theory is exact unless collision complexes exist.
Article
Under mild conditions on the long‐range behavior of the potential, we show that classical transition state theory is exact at energy E for a collinear atom–diatom reaction if there is only one candidate for transition state at energy E—that is, only one periodic vibration of energy E across the interaction region.
Article
We show that the best choice of transition state, for the atom exchange reaction in a classical collinear collision of an atom with a diatomic, is a classical bound state embedded in the continuum: a periodic vibration of the triatomic system across the interaction region of the potential surface. These unstable bound states also serve as limit sets of the trapped trajectories that form the boundary of reactivity bands in molecular collisions, and we comment on the implications of this result for calculation of product state distributions. Numerical calculations of transition states are presented for the collinear H+H2 and F+H2 reactions.