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A risk assessment method for remote sensing of cyanobacterial blooms in inland waters

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Abstract

Cyanobacterial blooms (CABs) of inland waters is a typical and severe challenge for water resources management and environment protection. An accurate and spatial continuous risk assessment of CABs is critical for prediction and preparedness in advance. In this study, a multivariate integrated risk assessment (MIRA) method of CABs in inland waters was proposed. MIRA was simplified with the trophic levels, cyanobacterial and other aquatic plant condition using remote sensing indexes, including the Trophic State Index (TSI), Floating Algae Index (FAI) and Cyanobacteria and Macrophytes Index (CMI). First, dates of risk assessment were carefully selected based on TSI. Then, we obtained the trophic levels, cyanobacterial and other aquatic plant condition of water using TSI, CMI and FAI on the selected date, and further scored them pixel by pixel to quantify the risk value. Finally, the CABs risk of CABs in water was accurately assessed based on the pixel risk value. Based on Landsat 8 OLI dataset, MIRA were executed in three different lakes of Wuhan urban agglomeration (WUA) with different trophic state, and validated with water quality data and the results of relating studies. The results demonstrated that the risk of CABs in Lake LongGan was overall higher than that in Lake LiangZi and Lake FuTou. And the risk of CABs in east part of Lake Longgan is high than the other parts. Seasonally, the risk level ranking in Lake LiangZi was the highest in summer, while lowest in winter. However, the seasonal risk ranking was spring, summer, autumn, and winter in Lake LongGan. Based on the comparisons with monthly water quality classification results and results of existing study, including trophic level, ecology risk and algal extent, It showed that MIRA method is valuable for spatial continues and accurately identifying the risk of CABs in inland waters with potential eutrophication trends.

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... In this kind of method, water samples were collected in the field and then analyzed in laboratory to obtain detailed characterization factors of HABs, e.g., Chl-a concentration and algal density. The present conditions of HABs in the whole lake can be finally assessed with spatial interpolation methods [14,15]. Although these methods have many advantages such as detailed monitoring parameters, high monitoring accuracy, etc., they consume a large amount of manpower, material and financial resources [16]. ...
... The DTLF design and application in Lake Chaohu demonstrated its high value in the monitoring and management of HABs in lakes. Firstly, different from traditional monitoring methods for HABs [14,18,24], this work aims to provide an efficient way to obtain Two thousand images captured with land-based video devices, i.e., validation data that do not participate in the training of the HAB monitoring algorithm, were used to evaluate the accuracy of HAB monitoring based on the video devices. The evaluation method will be introduced in Section 5.5. ...
... The DTLF design and application in Lake Chaohu demonstrated its high value in the monitoring and management of HABs in lakes. Firstly, different from traditional monitoring methods for HABs [14,18,24], this work aims to provide an efficient way to obtain the real-time situation of HABs in nearshore areas of lakes. From 8 a.m. to 6 p.m. every day, coverage ratios of HABs in key nearshore areas can be accurately and frequently monitored ( Figure 3). ...
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Harmful algal blooms (HABs) caused by lake eutrophication and climate change have become one of the most serious problems for the global water environment. Timely and comprehensive data on HABs are essential for their scientific management, a need unmet by traditional methods. This study constructed a novel digital twin lake framework (DTLF) aiming to integrate, represent and analyze multi-source monitoring data on HABs and water quality, so as to support the prevention and control of HABs. In this framework, different from traditional research, browser-based front ends were used to execute the video-based HAB monitoring process, and real-time monitoring in the real sense was realized. On this basis, multi-source monitored results of HABs and water quality were integrated and displayed in the constructed DTLF, and information on HABs and water quality can be grasped comprehensively, visualized realistically and analyzed precisely. Experimental results demonstrate the satisfying frequency of video-based HAB monitoring (once per second) and the valuable results of multi-source data integration and analysis for HAB management. This study demonstrated the high value of the constructed DTLF in accurate monitoring and scientific management of HABs in lakes.
... These intensive blooms pose a major risk to water security, such as increasing turbidity, choking the growth of submerged aquatic vegetation, and producing toxicity in the water (Lin et al., 2021;Shi et al., 2018;Su et al., 2017). As a result, it threatens the safety of drinking water and affects the normal lives of the surrounding residents (Chen et al., 2020;Duan et al., 2017;Xu et al., 2016). Here, the term "blooms" refers to the surface scums of cyanobacteria or the aggregation of cyanobacteria near the water surface. ...
... Thus requires an advanced risk assessment of cyanobacterial blooms in eutrophic freshwater lakes (Chen et al., 2021;Zhang et al., 2019a) to guide water resource management (Xu et al., 2021b). Most studies have estimated cyanobacterial bloom risk levels using field-collected data from multiple indicators related to blooms or only one spatially continuous cyanobacterial product (Chen et al., 2020;Huang et al., 2020). Nevertheless, the occurrence of cyanobacterial blooms in lakes has clear spatial heterogeneity and is affected by various factors (Qi et al., 2018;Wang et al., 2022). ...
... Lake trophic states were classified as oligotrophic (0 ≤ TSI < 30), mesotrophic (30 ≤ TSI < 50), and eutrophic (50 ≤ TSI < 100). Previous studies have revealed that high nutrient levels may trigger cyanobacterial blooms (Chen et al., 2020;Xu et al., 2021a). Referring to the World Health Organization guidelines (2003), our risk assessment framework measured this risk using a TSI threshold of 30 to distinguish the trophic states below or over mesotrophic. ...
Article
Climate change has catalyzed the global expansion of cyanobacterial blooms in eutrophic freshwater lakes and threatens water security. In most studies, the cyanobacterial bloom risk levels in lakes were evaluated using field-collected data from multiple indicators or spatially continuous data from one cyanobacteria-related indicator. Nevertheless, the occurrence of cyanobacterial blooms in lakes has clear spatial heterogeneity and is affected by numerous factors. Therefore, we developed a multivariable integrated risk assessment framework for cyanobacterial blooms in lakes using five spatially continuous datasets to estimate the risk level of cyanobacterial blooms at the pixel scale (250 m). The spatial and temporal variations in cyanobacterial bloom risk levels from May 1, 2002, to October 31, 2020, were investigated for three typical eutrophic lakes in China: Lake Taihu, Lake Chaohu, and Lake Dianchi. Seasons and regions of high cyanobacterial bloom risk were identified for each lake. Environmental characteristics were discussed. A long-term investigation revealed that owing to its warm climate, the cyanobacterial risk levels in summer and autumn were much higher than those in the other two seasons. At the synoptic scale, Lake Taihu had a lower cyanobacterial bloom risk than lakes Chaohu and Dianchi. A further comparison found that precipitation, wind speed, and temperature were responsible for the differences in cyanobacterial bloom risk levels among the three lakes. At the pixel scale, the risk map indicated that the cyanobacterial bloom risk levels of Lake Taihu were unevenly distributed, and the cyanobacterial bloom risk of the lakeshore was higher than that of the other subregions. Nutrient levels played the most critical role in the regional differences in cyanobacterial bloom risk levels in a lake. Bloom events were defined and classified as “long-term bloom” or “flash bloom” according to their duration (over or below a year). Overall, this study can assist in advanced water management with a pixel-scale evaluation of cyanobacterial bloom risk levels.
... Each FAI image (masked land and cloud pixels) can generate a gradient image. The pixel gradient is defined as the FAI difference from the adjacent pixels in the 3 × 3 window (Chen et al., 2020a;Hu et al., 2010). The extraction of CyanoHABs was disturbed by a high concentration of suspended solids in water (Hu et al., 2010). ...
... The gradient value of the remaining pixels is determined. Several studies have shown that the FAI value corresponding to the maximum gradient value in an image can be used as a threshold for distinguishing between phytoplankton and pure water pixels (Chen et al., 2020a;Hu et al., 2010;Zhang et al., 2014). This is understandable because there should be a maximum grayscale change in FAI values of the MODIS images (MODIS-FAI) at the boundary of bloom and non-bloom. ...
... After automatic generation of MODIS image FAI values (MODIS-FAI), the algal threshold for each image was determined by a histogram of the gradient distribution based on the sum of the FAI differences of each pixel and its 3 × 3 pixels on the adjacent boundary. The threshold for non-algae pixels was then defined as − 0.004 by subtracting two times the standard deviation from the average threshold of all MODIS-FAI images (Chen et al., 2020a;Hu et al., 2010;Zhang et al., 2014). ...
Article
Cyanobacterial Harmful Algae Blooms (CyanoHABs) in the eutrophic lakes have become a global environmental and ecological problem. In this study, a CNN-LSTM integrated model for predicting the CyanoHABs area was proposed and applied to the prediction of the CyanoHABs area in Taihu Lake. Firstly, the time-series data of the CyanoHABs area in Taihu Lake for 20 years were accurately obtained using MODIS images from 2000 to 2019 based on the FAI method. Then, a principal component analysis was performed on the daily meteorological data for the month before the outbreak of CyanoHABs in Taihu Lake from 2000 to 2019 to determine the meteorological factors closely related to the outbreak of CyanoHABs. Finally, the features of CyanoHABs area and meteorological data were extracted by Convolutional Neural Networks (CNN) model and used as the input of Long Short Term Memory Network (LSTM). An integrated CNN-LSTM model approach was constructed for predicting the CyanoHABs area. The results show that high R² (0.91) and low mean relative error (17.42%) verified the validity of the FAI index to extract the CyanoHABs area in Taihu Lake; the meteorological factors closely related to the CyanoHABs outbreak in Taihu Lake are mainly temperature, relative humidity, wind speed, and precipitation; the CNN-LSTM integrated model has better prediction effect for both training and test sets compared with the CNN and LSTM models. This study provides an effective method for predicting temporal changes in the CyanoHABs area and offers new ideas for scientific and effective regulation of inland water safety.
... The constellation of Sentinel-2A/2B and Landsat-8/9 satellites is expected to afford a 2-3 day revisit globally (not accounting for clouds) when Landsat-9 becomes operational (Pahlevan et al., 2019). As a result, a number of studies have begun to explore the application of Landsat-8 and Sentinel-2 imagery to inland, estuarine, and coastal waters (e.g., Herrault et al., 2016;Kutser et al., 2016;Olmanson et al., 2016;Chen et al., 2019;Kuhn et al., 2019;Luis et al., 2019;Page et al., 2019;Chen et al., 2020aChen et al., , 2020bChunHock et al., 2020;Zhang et al., 2020). Yet, satellite imagery from these two missions, or their merged time-series products, has not been previously applied to study biogeochemical exchanges in highly dynamic, tidally influenced wetland-estuarine environments. ...
... OLI and MSI Level 1 data were processed using the open-source ACOLITE processor (v20190326) to generate ocean color remote sensing reflectance (R rs (λ)) after applying the default "dark spectrum fitting (DSF)" algorithm for atmospheric correction (Vanhellemont, 2019;Vanhellemont and Ruddick, 2018). Previous studies have demonstrated successful processing of Landsat and Sentinel satellite images using the DSF approach in both inland and coastal waters (e.g., Caballero and Stumpf, 2019;Chen et al., 2020aChen et al., , 2020b. For the Sentinel-2/MSI data, the 60 m resolution blue band (B1) was internally resampled to the 10 m grid in ACOLITE, generating R rs (443) at the finer 10 m spatial resolution. ...
... Many previous studies focusing on satellite retrievals of DOC in coastal environments have been based on first retrieving the absorption coefficient of the colored component of DOM (i.e., a CDOM ) and then estimating DOC concentrations either by using seasonally and regionally specific relationships between a CDOM and DOC (e.g., Mannino et al., 2008;Joshi et al., 2017;Chen et al., 2020aChen et al., , 2020b or, alternatively, linking the DOC-specific CDOM absorption to its spectral shape to account for variability in DOC quality in nearshore environments (e.g., Fichot and Benner, 2012;Cao et al., 2018). Other published studies, particularly in inland and estuarine waters, have successfully linked DOC concentrations directly to water reflectance (e.g., Hirtle and Rencz, 2003;Tehrani et al., 2013;Huang et al., 2017). ...
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Estuarine and coastal wetlands are among the most productive, ecologically valuable, and economically important ecosystems on Earth. Through tidal inundation and lateral export, estuarine marshes exert a strong influence on the amount and quality of carbon and nutrients exchanged between the land and the ocean. Yet, current understanding of the role of these "blue carbon" ecosystems on estuarine optics, biogeochemistry, and ecology is largely based on limited field observations at point locations, due to the coarse resolution of existing and heritage satellite ocean color sensors. Here, for the first time, we merged high resolution data from the constellation of Landsat-8/Operational Land Imager (OLI) and Sentinel-2A/B MultiSpectral Instruments (MSI) to examine dissolved organic carbon (DOC) dynamics in a tidally influenced temperate marsh–estuarine system. Often referred to as the "Everglades of the North", the Blackwater National Wildlife Refuge is the largest marsh system in the Chesapeake Bay and one of the most ecologically important areas in the United States. A multiple linear regression approach, linking DOC to the spectral shape of water remote sensing reflectance, was used to capture spatial features and temporal changes in DOC over a broad range of conditions (DOC in the range of 2.32–19.9 mg/L), across multiple years, different seasons, and tidal regimes, with a mean average percent difference of 23%. The data consistency between satellite sensors was evaluated, followed by a demonstration of a consistent, multi-sensor DOC data record that provided more frequent observations. Combining data from the three satellites, revealed the strong impact of marsh outwelling at the larger ecosystem scale, its seasonal variability, and the importance of other environmental factors, including wind conditions, river discharge, and extreme weather events, in shaping DOC dynamics along complex, tidally influenced terrestrial–aquatic interfaces. Graphical absract
... Various interdisciplinary approaches have been closely integrated with remote sensing technology to establish novel methodologies for the long-term monitoring and assessment of regional environments. Chen et al. (2020) developed a multivariate integrated risk assessment (MIRA) method for evaluating cyanobacterial blooms (CABs). This method was applied to Lake Liangzi and Lake FuTou, with its results corroborated by remote sensing data obtained from the Landsat 8 OLI Dataset (Chen et al., 2020). ...
... Chen et al. (2020) developed a multivariate integrated risk assessment (MIRA) method for evaluating cyanobacterial blooms (CABs). This method was applied to Lake Liangzi and Lake FuTou, with its results corroborated by remote sensing data obtained from the Landsat 8 OLI Dataset (Chen et al., 2020). Additionally, Zhou et al. (2021) employed the Forel-Ule Index (FUI) to assess the trophic level of five inland lakes in the vicinity of Wuhan, China (Zhou et al., 2021). ...
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This study provides a comprehensive review of eutrophication assessment and simulation within surface water ecosystems. It is noted that the majority of contemporary models and assessment methodologies fail to account for variations in local stream characteristics and their consequent impacts on biotic communities. To visualize the progression and focal points of eutrophication research, a total of 12,409 articles and their associated references were analyzed with bibliometric tools. The review procedure clarified the approaches used in eutrophication assessment and predicted future development trends. Contemporary research on eutrophication simulation and assessment predominantly concentrates on nutrients, phytoplankton, life-cycle assessment, trophic indices, and agricultural impacts. Additionally, the research frontiers have transitioned from traditional focuses on water quality and ecological status to more specialized areas such as freshwater modeling, harmful algal blooms, and estuarine dynamics. Consequently, this review constitutes a significant resource for researchers aiming to utilize eutrophication simulators in the context of groundwater ecosystem protection and water quality management. The findings will facilitate the advancement of assessment methodologies for trophic levels and capture the progression of cutting-edge research developments.
... However, recent literature indicates that although Liangzi Lake has not yet become the most severely affected area by cyanobacterial blooms, there are signs suggesting its potential for high risk (N. Chen et al., 2020). The existing research on Liangzi Lake is predominantly focused on the assessment of water quality index (WQI) and their spatiotemporal evolution trends (Lin et al., 2023;Shen et al., 2023;Zhang et al., 2019a). ...
... Larger datasets offer more input information for training models, but increasing the sample size of the training dataset can incur significant computational costs (N. Chen et al., 2020). We input the data sequentially in order of parameters ranking and compared the model's performance in terms of R 2 , RMSE, sMAPE, and MAE. ...
... Here, the FAI (Hu 2009) was used for detecting floating algae in lakes. In addition, the CMI was chosen to distinguish waters with cyanobacterial scums from those dominated by aquatic macrophytes, following a baseline subtraction similar to the FAI index with clearly different band combinations (Chen et al. 2020a;Liang et al. 2017). The use of the baseline subtraction method removed additional impacts from atmospheric effects. ...
... The maximum category variance method (Otsu) is a global binarization algorithm and an adaptive threshold acquisition method, and it has been widely used in previous studies (Chen et al. 2020a;Liang et al. 2017). The otsu algorithm divides the image into two parts, the target (the proportion w 0 , and the average m 0 ) and the background (the proportion w 1 , and the average m 1 ), according to the grayscale characteristics of the image. ...
Article
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Water color is a crucial optical indicator of water quality, polluted water bodies often show water color anomalies. To comprehensively understand the occurrence of water color anomalies in inland lakes, an integrated method was designed using the hue angle based on the Forel-Ule Index (FUI) model, and other remote sensing indices, including the Turbid Water Index (TWI), Floating Algae Index (FAI), and Cyanobacteria and Macrophytes Index (CMI). Based on all available Landsat-8 OLI images from 2013 to 2020, continuous monitoring was conducted in three different lakes in the middle of the Yangtze River, China. The results demonstrated that: (1) The proposed method can accurately identify algal blooms, high sediment loads, and eutrophication from the abnormal water color areas; (2) The calculated hue angles of sediment-dominated water were significantly higher than those of algal blooms and aquatic vegetation, providing a noticeable visual discoloration of water; (3) These water color anomalies exhibited significant correlations with the water quality and environmental conditions. This study serves as an example for accurate and spatially continuous assessment of water color anomaly and supports practical information to facilitate local water environment conservation.
... This increase in Poland was not only related to the demand for ecosystem services of the local population due to the increasing mean temperature (especially in the summer period) but also due to changes in the law regulations related to bathing waters which encouraged the local administration, as well as private owners of water bodies, to register the bathing waters. However, climate change significantly affect the water bodies, providing optimal conditions for the occurrence of cyanobacterial blooms which are noticed more often (Paerl and Huisman 2008;Huisman et al. 2018;Mantzouki et al. 2018;Kataržytė et al. 2019;Chen et al. 2020;Overlingė et al. 2020). Cyanobacterial blooms, as shown in this study, were the main reason for the closing of many bathing waters (Fig. 3, Fig. S1 in Supplementary Materials 2; Table S1 in Supplementary Materials 1) to protect people from potentially toxic effects (WHO 2003;Poniedziałek et al. 2012;Rzymski and Poniedziałek 2014;Kataržytė et al. 2019;Overlingė et al. 2020). ...
... Thus, considering the higher sensitivity of small water bodies to changes in the catchment and the additional load of nutrients resulting from the recreational activities of people, small water bodies with bathing waters in particular should be additionally monitored with the obligatory assessment of chlorophyll-a concentration. This monitoring might be supported or even performed by the remote sensing methods to minimize the costs of the chlorophyll-a analysis as many authors were already suggested (Kataržytė et al. 2019;Chen et al. 2020;Overlingė et al. 2020). As pointed above, small water bodies are especially characterized by rapid changes and the water quality might transition from good ("the clear water state") to bad ("the turbid water state") (Scheffer 1989;Scheffer and Van Nes 2007;Janssen et al. 2014;Andersen et al. 2020). ...
Article
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The safety of beachgoers and swimmers is determined by the presence or absence of microbial contaminants and cyanobacterial toxins in the water. This study compared the assessment of bathing waters according to the Bathing Water Directive, which is based on the concentration of fecal contaminants, with some modifications, and a new method based on the concentration of chlorophyll-a, which corresponds to the World Health Organization (WHO) guidelines used for determining cyanobacterial density in the water posing threat to people health. The results obtained from the method based on chlorophyll-a concentration clearly showed that the number of bathing waters in Poland with sufficient and insufficient quality were higher in 2018 and 2019, compared to the method based on microbial contamination. The closing of bathing waters based only on the visual confirmation of cyanobacterial blooms might not be enough to prevent the threat to swimmers' health. The multivariate analyses applied in this study seem to confirm that chlorophyll-a concentration with associated cyanobacterial density might serve as an additional parameter for assessing the quality of bathing waters, and in the case of small water reservoirs, might indirectly inform about the conditions and changes in water ecosystems.
... Consequently, there is a compelling need to develop cost-effective and scalable monitoring solutions. Although remote sensing techniques utilizing satellite imagery (Ahn et al., 2006;Cannizzaro et al., 2019;Chen et al., 2020;Hu, 2009;Kutser et al., 2006) offer a non-invasive alternative, their efficacy is limited by meteorological constraints and the temporal resolution of satellite overpasses, rendering them inadequate for capturing the rapid temporal dynamics characteristic of cyanobacterial bloom events. The recent study by Barrientos-Espillco et al. (2023) addresses the detection of cyanobacterial blooms using Autonomous Surface Vehicles (ASVs) equipped with Machine Vision Systems (MVS). ...
Article
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Cyanobacterial blooms emerge unpredictably on the surface of lentic water bodies, posing both ecological threats and public health risks. To effectively monitor these events, this study introduces the use of Machine Vision Systems (MVS) integrated into Autonomous Surface Vehicles (ASVs). These ASVs are capable of autonomous and safe navigation, enabling them to detect cyanobacterial blooms while avoiding obstacles. Convolutional Neural Networks (CNNs) are employed for early detection and continuous monitoring, but their effectiveness hinges on access to large, high-quality training datasets. Due to the sporadic and uncontrollable nature of bloom occurrences, acquiring sufficient real-world images for training and validating CNN models is a significant challenge. To overcome this, the Stable Diffusion XL (SDXL) text-to-image generative model is utilized to produce realistic synthetic images, ensuring a sufficient dataset for training. However, SDXL alone struggles to accurately depict cyanobacterial blooms. To address this limitation, DreamBooth is used to fine-tune SDXL with a small set of real bloom-specific image patches. To ensure the diversity of the synthetic dataset, detailed prompts for SDXL are generated using a Large Language Model (LLM). The combination of SDXL fine-tuning with LLM-driven prompts design applied to environmental monitoring and autonomous navigation in lentic environments represents the core innovation of this work. A dual-task CNN model is then trained on the synthetic dataset to simultaneously detect blooms and obstacles. Experimental results demonstrate the effectiveness and novelty of the proposed approach, showing improvements of up to 15.74% in object detection and 6.48% in semantic segmentation compared to the baseline dataset.
... For instance, the decline in aquatic biodiversity and the degradation of aquatic macrophytes [15]. What is worse, the risk of cyanobacteria blooms has increased in recent years [17]. Thus, the risk assessment and management of plankton is necessary in Liangzi Lake. ...
Article
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Liangzi Lake, a typical shallow lake in the middle reaches of the Yangtze River, is important for water resource and biodiversity conservation. With the development of urbanization, anthropogenic activities have posed serious threats to the water quality and biodiversity of Liangzi Lake. To assess the aquatic ecosystem health of Liangzi Lake, the structure, the environmental response, and the interactions of plankton were investigated in 2022 and 2023. The results indicated that water temperature was a pivotal factor regulating plankton dynamics, with the assemblage patterns predominantly shaped by the phytoplankton species, which were Bacillariophyta in spring and Chlorophyta in summer. In terms of the phytoplankton, dissolved oxygen and the N:P ratio significantly affect cyanobacteria distribution. The high biomass and abundance of cyanobacteria in summer highlight the potential risk of harmful algal blooms. In contrast to the phytoplankton, the zooplankton exhibited enhanced resilience to changes in the surrounding environment. Rotifera was the dominant group in summer in terms of both abundance and biomass. Most core genera of plankton were jointly identified by eDNA metabarcoding and microscopical analysis, and eDNA metabarcoding had advantages in revealing a higher diversity. However, some taxa among rotifers such as Liliferotrocha were only identified using microscopical analysis. Therefore, a combination of both the methods is recommended to better understand the structuring mechanisms of plankton assemblages in lake ecosystems.
... Liu also investigated the eukaryotic phytoplankton structures using high-throughput sequencing technology in 2019, and found that pH, NH 4 + -N, and nitrate nitrogen (NO 3 − -N) were the most crucial environmental factors affecting the structure of the phytoplankton community in the Danjiangkou reservoir [16]. Along with its rapidly expanding economy, China is also facing the increasingly serious problem of eutrophication, especially in aquatic ecosystems of lakes and reservoirs [17,18]. Water bloom is the worst result of lake or reservoir eutrophication [19]. ...
Article
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Freshwater reservoirs serve as vital water sources for numerous residential areas. However, the excessive presence of nutrients, such as nitrogen and phosphorus, stimulates rapid algal proliferation, leading to the occurrence of algal blooms. To prevent this phenomenon, it is imperative to conduct regular ecological surveys aimed at assessing water quality and monitoring the dynamic composition of aquatic biological communities within the reservoir’s ecosystem. In this study, seasonal changes in water quality parameters and the spatial and temporal distribution of planktonic algae at 14 sampling sites in the Danjiangkou reservoir were analyzed. A total of 136 taxonomic units of planktonic algae were identified, belonging to 8 phyla, 41 families, and 88 genera, with the dominant algae belonging to the phyla Chlorophyta, Bacillariophyta, and Cyanophyta. The order of abundance of the algae was summer > autumn > spring > winter and Hanku > Intake > Danku > Outflow. WT, pH, DO, CODMn, and Chl a were the primary drivers influencing the changes in the planktonic algal community within the reservoir. Two dominant algae, Chlamydomonas debaryana and Scenedesmus quadricauda, were isolated and cultured indoors to simulate the growth behaviors of algae in the Danjiangkou reservoir. The results show that the growth of C. debaryana was severely limited by the temperature, light, and nutrient concentration, whereas the growth of S. quadricauda was slightly affected under different temperature and light conditions and could occur at low concentrations of nitrogen and phosphorus nutrients. With excess nutrient levels, excessive proliferation of S. quadricauda could potentially cause algal blooms. This study examined the growth characteristics of the dominant algae in the Danjiangkou reservoir under laboratory conditions and delved into their interdependencies with environmental factors, aiming to furnish a theoretical and experimental foundation for investigating algal community dynamics and preventing algal blooms within the freshwater reservoir.
... The aquatic plant system is an important species that maintains the ecological safety of reservoirs and ponds [37,38]. It could increase the dissolved oxygen and the number of plankton in the ponds [39], and reduce the level of inorganic nitrogen and the possibility of eutrophication of the water body [40]. Most importantly, aquatic plants can also provide a stable and high-quality food source for hairy crabs, trash fish, and other herbivorous or omnivorous animals in the food chain in the pond system [41]. ...
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The lakes, including reservoirs and ponds in the Yellow River Delta, are characterized by many fragile ecosystems and low economic values. How to take into account both ecology restoration and the economic benefits of the lakes in this region is a complex problem. The Chinese mitten crab (Eriocheir sinensis)-aquatic plant system may have this potential. In this study, we planted aquatic plants, e.g., Elodea nuttallii, Hydrilla verticillate, and Vallisneria natans, with the crabs and investigated geochemical parameters in the ponds. The concentration of NH4+-N was lower than 0.5 mg/L, the pH of the breeding peiponds was 8.274-9.365, and the dissolved oxygen was 3.554-6.048mg/L, which was better than the class II environmental quality standards for surface water. The more extensive specifications ( > 150g/pcs) of the crab growth with the aquatic plants account for >35% of the total production. This model is significant to the ecological utilization of reservoirs in the Yellow River Delta but has low promotion. Therefore, some compulsory breeding policies and breeding standards must be proposed. It is the current ecological needs of the ecological protection Yellow River Delta.
... Vision-based remote-sensing monitoring studies of CyanoHABs use satellite with hyperspectral imagery [7][8][9][10][11]. The study in [12] mentions that the most commonly used remote sensing spectral indices to identify CyanoHABs are: band ratio index, normalized difference vegetation index (NDVI), maximum chlorophyll index (MCI), and floating algae index (FAI). ...
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Cyanobacterial Harmful Algal Blooms (CyanoHABs) in lakes and reservoirs have increased substantially in recent decades due to different environmental factors. Its early detection is a crucial issue to minimize health effects, particularly in potential drinking and recreational water bodies. The use of Autonomous Surface Vehicles (ASVs) equipped with machine vision systems (cameras) onboard, represents a useful alternative at this time. In this regard, we propose an image Semantic Segmentation approach based on Deep Learning with Convolutional Neural Networks (CNNs) for the early detection of CyanoHABs considering an ASV perspective. The use of these models is justified by the fact that with their convolutional architecture, it is possible to capture both, spectral and textural information considering the context of a pixel and its neighbors. To train these models it is necessary to have data, but the acquisition of real images is a difficult task, due to the capricious appearance of the algae on water surfaces sporadically and intermittently over time and after long periods of time, requiring even years and the permanent installation of the image capture system. This justifies the generation of synthetic data so that sufficiently trained models are required to detect CyanoHABs patches when they emerge on the water surface. The data generation for training and the use of the semantic segmentation models to capture contextual information determine the need for the proposal, as well as its novelty and contribution. Three datasets of images containing CyanoHABs patches are generated: (a) the first contains real patches of CyanoHABs as foreground and images of lakes and reservoirs as background, but with a limited number of examples; (b) the second, contains synthetic patches of CyanoHABs generated with state-of-the-art Style-based Generative Adversarial Network Adaptive Discriminator Augmentation (StyleGAN2-ADA) and Neural Style Transfer as foreground and images of lakes and reservoirs as background, and (c) the third set, is the combination of the previous two. Four model architectures for semantic segmentation (UNet++, FPN, PSPNet, and DeepLabV3+), with two encoders as backbone (ResNet50 and EfficientNet-b6), are evaluated from each dataset on real test images and different distributions. The results show the feasibility of the approach and that the UNet++ model with EfficientNet-b6, trained on the third dataset, achieves good generalization and performance for the real test images.
... In this study, the MODIS surface reflectance product (MOD09A1) was downloaded through a data platform named Application for Extracting and Exploring Analysis Ready Samples (AppEEARS) from 2015 to 2020. MOD09A1 provides an estimate of surface reflectance (Terra Bands 1 through 7) which has been corrected for atmospheric conditions such as Rayleigh scattering and gasses (Chen et al., 2020b). For each pixel, the value is selected from the acquisitions within 8-day composite period with a spatial resolution of 500 m. ...
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Surface soil moisture (SSM) is of great importance in understanding global climate change and studies related to environmental and earth science. However, neither of current SSM products or algorithms can generate SSM with High spatial resolution, High spatio-temporal continuity (cloud-free and daily), and High accuracy simultaneously (i.e., 3H SSM data). Without 3H SSM data, fine-scale environmental and hydrological modeling cannot be easily achieved. To address this issue, we proposed a novel and integrated SSM downscaling framework inspired by deep learning-based point-surface fusion, which was designed to produce 1 km spatially seamless and temporally continuous SSM with high accuracy by fusing remotely sensed, model-based, and ground data. First, SSM auxiliary variables (e.g., land surface temperature, surface reflectance) were gap filled to ensure the spatial continuity. Meanwhile, the extended triple collocation method was adopted to select reliable in-situ stations to address the scale mismatch issue in SSM downscaling. Then, the deep belief model was utilized to downscale the original 9 km SMAP SSM and 0.1º. ERA5-Land SSM to 1 km. The downscaling framework was validated over three ISMN soil moisture networks covering diverse ground conditions in Southwestern US. Three validation strategies were adopted, including in-situ validation, time-series validation, and spatial distribution validation. Results showed that the average Pearson correlation coefficient (PCC), unbiased root mean squared error (ubRMSE), and mean absolute error (MAE) achieved 0.89, 0.034 m3m−3, and 0.032 m3m−3, respectively. The use of point-surface fusion greatly improved the downscaling accuracy, of which the PCC, ubRMSE, and MAE were improved by 3.73, 20.93, and 39.62% compared to surface-surface fusion method, respectively. Comparative analyses have also been carefully conducted to confirm the effectiveness of the framework, in terms of other downscaling algorithms, scale variations, and fusion methods. The proposed method is promising for fine-scale studies and applications in agricultural, hydrological, and environmental domains.
... Meanwhile, the gapfill tool was used to remove black strips from the Landsat 7 ETM+ gap-off data. The FAI (Chen et al., 2020;Hu, 2009;Oyama et al., 2015) was used to identify algal bloom regions after land and cloud masking with visual analysis. The formulas are as follows: ...
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As one of three top-priority eutrophic lakes in China, Dianchi Lake has received national attention due to its severe eutrophication in recent decades. Meteorological factors are the main factors driving the formation and persistence of algae blooms. In addition, meteorological variation-induced algal blooms usually have a hysteresis effect. However, there have been few quantitative studies on this hysteresis effect. In the present study, Landsat images were used to extract the dynamic characteristics of changes in algal blooms in Dianchi Lake from 1988 to 2020. The hysteresis effect of meteorological factors driving algal blooms was studied by employing the modified lag-correlation method. The results showed that the algal blooms in Dianchi Lake were most severe between 1998 and 2008. During the periods of algal blooms, the values of air temperature (AT) and precipitation (PP) were significantly higher, while those wind velocity (WV) and sunshine duration (SSD) were obviously lower, than the corresponding annual mean values. AT and PP were significantly positively correlated with algal bloom factors in both the formation and persistence stages of algal blooms, while SSD and WV both promoted their regression, but these effects were less significant in the persistence period than in the formation period. Moreover, rainfall led to a decrease in SSD and WV, indirectly contributing to algal blooms. Furthermore, AT, PP and SSD are the main factors impacting the duration of persistent blooms. The time periods during which each meteorological factor was most influential were as follows: 1) AT - 25-30 days before the maximum bloom. 2) PP - within the first 10 days before the maximum bloom. 3) Both SSD and WV - 15-20 days before the maximum bloom. The results of this study support the prediction of algal blooms in Dianchi Lake.
... Landsat-8 OLI is an imager with 9 bands [32]. Chinese GF-1 satellite carries four WFV sensors that cover 4 bands [33][34]. HJ-1 has two satellites: HJ-1A and HJ-1B, they are both equipped with two multispectral cameras that have 4 bands, as shown in Table 1. ...
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Lake Chaohu has been suffering from harmful cyanobacteria blooms, while the clouds pixels in satellite images are usually mistaken as cyanobacteria blooms by some traditional indicators, leading to the need for cloud masking in advance. In addition, atmospheric correction is another challenge due to lack of a general atmospheric correction method and the difficulties in evaluating its accuracy without in situ investigations. Fortunately, tasseled cap transformation (TCT) allows to extract vegetation properties directly from satellite imagery digital numbers (DN), which provides a perspective for extracting cyanobacteria blooms independent from atmospheric correction. This study focuses on how to use TCT to establish an indicator, which allows to extract cyanobacteria blooms directly from image DN values without conducting any atmospheric correction or cloud-masking. Training and test sets containing over 200,000 pixels are constructed from 18 Sentinel-2A/B MSI images acquired in different seasons in recent three years. Four components are derived from TCT and they could form up to 81 linear combinations. Experimental results performed on the training set show that the candidate, which combines the last three components with the coefficients of 1,-1 and 0, assigns cyanobacteria blooms pixels in a completely separated value range from water, cloud, cloud shadow and cloud edge pixels. The candidate is defined as ICW3C index. Its threshold value range of (175 330) is given and the pixels with ICW3C values greater than its threshold could be classified as cyanobacteria blooms. Comparisons between ICW3C and the floating algae index (FAI) on the test set show that ICW3C misclassifies 0.02% of cloud pixels and 1.55% of yellow cloud edge pixels as cyanobacteria blooms, however, 19.18% clouds, 13.74% yellow cloud edges and 19.34% blue-green cloud edges are incorrectly identified as cyanobacteria blooms by FAI. Comparisons between ICW3C and FAI performed on image regions over time show that, in clear-sky regions with cyanobacteria blooms, FAI extracts 5.81% more pixels, which mainly lay in the edge of cyanobacteria blooms. In cloud-covered image regions without cyanobacteria blooms, FAI misclassifies over 608 times as many cloud and cloud edge pixels as ICW3C. Sensitivity test results suggest that the change of ICW3C threshold within its value range (175 330) will not lead to serious increase in misclassification, and ICW3C performs stable to variations of viewing geometry. Extension tests indicate that ICW3C is applicable for several other sensors. Further researches are still needed to test whether ICW3C is suitable for other inland lakes or seas.
... Based on spectral characteristics, it can be found that the most obvious characteristic of aquatic plants is the steep slope effect in the near-infrared band, and the steep slope effect of aquatic plants with higher enrichment is more obvious [11]. Many remote sensing index methods have been proposed by scholars around the world, including Normalized Difference Vegetation Index (NDVI) [12][13][14], Floating Algae Index (FAI) [15,16], Normalized Difference Water Index (NDWI) [17,18], Enhanced Vegetation Index (EVI) [19], and Normalized Difference Index of Cyanobacteria Bloom (NDICB) [20]. Among them, NDVI is the most widely used remote sensing index method. ...
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Remote sensing monitoring of aquatic vegetation is critical to the water quality evaluation of plateau lakes. To obtain a clear understanding of the water environment status of Dianchi Lake, a GF-5 hyperspectral characteristics-based optimal NDVI approach was employed to quantify the aquatic vegetation cover and analyze water quality. By characteristic bands recognition, the optimal NDVI was obtained; the spatial distribution of aquatic plants and water quality in Dianchi Lake were then analyzed. Results showed the following: (1) For Caohai, the optimal NDVI value was calculated by B86 in the red band range and B151 in the near-infrared band range, which achieve the best spectral response. For Waihai, the respective bands were B86 in the red band range and B99 in the near-infrared band range. (2) We also found significant regional differences in aquatic plants distribution for the study area. Caohai was dominated by aquatic plants and high-quality water areas only occurred in the northern tip. While the situation for Waihai was much optimistic, areas with poor water quality were mainly found in the north and south parts. Water quality also showed a descending trend from the lakeside zone to the lake center. (3) By comparing to previous studies, we concluded that policy interventions and water protection measures carried out by the government during the past years are extremely effective. The optimal NDVI method provides a reliable evaluation and is potentially transferable to other plateau lake areas as a robust approach for the rapid assessment of water quality.
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River eutrophication is difficult to diagnose and estimate quantitatively because of its complex degradation mechanism in large river systems. Conventional monitoring and modeling methods are limited to accurately revealing the evolution process and trends of river aquatic organisms. In the present study, based on HJ-1A/1B CCD sensor, combined with genetic algorithm (GA) and regression tree (GART), a remote sensing inversion prediction model was established; the model can estimate algal blooms in the Han River affected by China’s Middle Route of the South-to-North Water Diversion Project (SNWTP). During the outbreak of algal blooms, the near-infrared band reflectance evidently increased between 2009 and 2015, with increasing algal density. The algal density in the downstream of the Han River has a nearly synchronous positive change with the reflectance in the B4 (near-infrared) band and a nearly synchronous reverse change with the B1 (blue) band. B1 and B4 screened by GA reduced redundancy by 14%, leading to a good prediction performance (R² = 0.88). According to GART and partial dependence analysis, the B4 band is a crucial characterization factor of algal blooms in the Han River. When the remote sensing band was in the range of B1 ⩾ 0.085 and B4 ⩽ 0.101, the algal density was lower than 0.15 × 10⁷ cells l⁻¹, indicating no algal bloom in the downstream of the Han River. When B4 was >0.103 and B1 ⩽ 0.076, algal density was higher than 1 × 10⁷ cells l⁻¹ and algal blooms were very likely to occur. These findings could provide a scientific reference for diagnosing and predicting large-scale water ecological degradation in similar watersheds.
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Cyanobacterial blooms (CBs) are a growing concern for shallow plateau lakes, and numerous studies have investigated the relationship between CBs and meteorological factors. However, these studies have typically lacked comprehensive analyses and neglected the impact of lag effects. This study employed Landsat satellite imagery to extract CBs information from Xingyun Lake from 1990 to 2019 and conducted a lag correlation analysis between meteorological factors ranging from 1 to 30 days with a 1-day step and CBs. The result show that the Sunshine Duration displayed a negative correlation with CBs at an 8-day lag, but when Sunshine Duration was <6 h, it exhibited a positive relationship with CBs at a 1-day lag. And daytime precipitation had a more substantial positive link with CBs than nighttime precipitation at a lag of 13 days. The aforementioned conclusions deepen our comprehension of the meteorological forces that drive cyanobacterial blooms in plateau lakes. Moreover, the maximum and minimum wind velocities were negatively and positively associated with CBs with lags of 20 and 29 days, respectively. In addition, relative humidity and atmospheric pressure were positively associated with cyanobacterial blooms 13-19 days and 3 days after their onset, respectively. The relationship between air temperature and cyanobacterial blooms in Xingyun Lake was weak. Our research emphasizes the significance of incorporating delayed effects and refined meteorological factors for accurate cyanobacterial bloom forecasting.
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The 21st century witnessed unprecedented development in Chinese cities and rapid urbanization has exerted substantial effects on regional environmental and climate change. While increased precipitation and temperature extremes have been widely observed under urbanization, whether increasing urbanization enhances or mitigates drought evolution is still unknown. By applying a series of trend analysis, nonstationary frequency analysis, and spatial characteristics analysis, this study investigates urbanization effects and contributions on drought development, taking the rapidly developing Yangtze River Basin (YRB) as an example. Results indicate that urbanization leads to exacerbation of drought at three major urban agglomerations in YRB, which accounts for 46.62% of total variations for Standardized Precipitation Evapotranspiration Index (SPEI). Considering nonstationary features, urbanization appears to mitigate extreme drought conditions (1.14%) while drought duration and severity are increased (9.02%) and enhanced (9.12%) under 50-year return period over YRB, respectively. From the spatial perspective, area of urbanizing region in a drought event also indicates a significant increasing trend during 1981 to 2018. These findings further confirm that urbanization appears to be a notable local factor that leads to the modifications of regional drought development. The results are expected to provide implications for mitigating drought impacts and making related policy.
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This study aims to simulate the watershed of the Mindanao River Basin (MRB) to enhance water resource management for potential hydropower applications to meet the power demand in Mindanao with an average growth of 3.8% annually. The soil and water assessment tool (SWAT) model was used with inputs for geospatial datasets and weather records at four meteorological stations from DOST-PAGASA. To overcome the lack of precipitation data in the MRB, the precipitation records were investigated by comparing the records with the global gridded precipitation datasets from the NCDC-CPC and the GPCC. Then, the SWAT simulated discharges with the three precipitation data were calibrated with river discharge records at three stations in the Nituan, Libungan and Pulangi rivers. Due to limited records for the river discharges, the model results were, then, validated using the proxy basin principle along the same rivers in the Nituan, Libungan, and Pulangi areas. The R2 values from the validation are 0.61, 0.50 and 0.33, respectively, with the DOST-PAGASA precipitation; 0.64, 0.46 and 0.40, respectively, with the NCDC-CPC precipitation; and 0.57, 0.48 and 0.21, respectively, with the GPCC precipitation. The relatively low model performances in Libungan and Pulangi rivers are mainly due to the lack of datasets on the dam and water withdrawal in the MRB. Therefore, this study also addresses the issue of data quality for precipitation and data scarcity for river discharge, dam, and water withdrawal for water resource management in the MRB and show how to overcome the data quality and scarcity.
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Cyanobacterial harmful algal blooms are the most common form of harmful algal blooms in freshwater systems throughout the world. However, in situ sampling of cyanobacteria in inland lakes is limited both spatially and temporally. Satellite data has proven to be an effective tool to monitor cyanobacteria in freshwater lakes across the United States. This study uses data from the European Space Agency Envisat MEdium Resolution Imaging Spectrometer and the Sentinel-3 Ocean and Land Color Instrument to provide a national overview of the percentage of lakes experiencing a cyanobacterial bloom on a weekly basis for 2008-2011, 2017, and 2018. A total of 2321 lakes across the contiguous United States were included in the analysis. We examined four different thresholds to define when a waterbody is classified as experiencing a bloom. Across these four thresholds, we explored variability in bloom percentage with changes in seasonality and lake size. As a validation of algorithm performance, we analyzed the agreement between satellite observations and previously established ecological patterns, although data availability in the wintertime limited these comparisons on a year-round basis. Changes in cyanobacterial bloom percentage at the national scale followed the well-known temporal pattern of freshwater blooms. The percentage of lakes experiencing a bloom increased throughout the year, reached a maximum in fall, and decreased through the winter. Wintertime data, particularly in northern regions, were consistently limited due to snow and ice cover. With the exception of the Southeast and South, regional patterns mimicked patterns found at the national scale. The Southeast and South exhibited an unexpected pattern as cyanobacterial bloom percentage reached a maximum in the winter rather than the summer. Lake Jesup in Florida was used as a case study to validate this observed pattern against field observations of chlorophyll a. Results from this research establish a baseline of annual occurrence of cyanobacterial blooms in inland lakes across the United States. In addition, methods presented in this study can be tailored to fit the specific requirements of an individual system or region.
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Freshwater phytoplankton blooms affect public health and ecosystem services globally1,2, with harmful impacts resulting either from a bloom’s high intensity or the presence of toxin-producing phytoplankton species. Freshwater blooms result in economic losses of over US$4 billion annually in the United States alone, primarily from harm to aquatic food production, recreation and tourism, and drinking-water supplies3. Studies documenting bloom conditions in lakes have either focused only on individual or regional subsets of lakes4–6, or have been limited by lack of long-term observations7–9. Here, we use three decades of high-resolution Landsat 5 satellite imagery to investigate long-term trends in intense summertime near-surface phytoplankton blooms for dozens of large lakes globally. We find that peak summertime bloom intensity has increased in a majority (68 per cent) of the lakes studied, revealing a global exacerbation of bloom conditions. Lakes that have experienced a significant (P < 0.1) decrease in bloom intensity are rare (8 per cent). The reason behind the increase in phytoplankton bloom intensity remains unclear, however, as temporal trends do not track consistently with temperature, precipitation, fertilizer-use trends, or other previously hypothesized drivers. We do find that lakes with a decrease in bloom intensity warmed less compared to other lakes, suggesting that lake warming may already be counteracting management efforts to ameliorate eutrophication10,11. Our findings support calls for water-quality management efforts to account better for the interactions between climate change and local hydrologic conditions12,13.
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The present study was conducted to analyze the suitability of groundwater and surface water of the Indus Delta, Pakistan for domestic and irrigation purposes based on the concentrations of arsenic (As), total dissolved solids (TDS), and chloride (Cl). Around 180 georeferenced groundwater and 50 surface water samples randomly collected were analyzed and mapped spatially using ArcGIS 10.5 software. The results were compared with their respective WHO and FAO guidelines. The analysis revealed that as in groundwater and surface water samples ranged up to 200, and 25 µg/L respectively. Similarly, the TDS in the groundwater and surface water ranged from 203 to 17, 664 mg/L and 378 to 38,272 mg/L respectively. The Cl in groundwater and surface water varied between 131 and 6,275 mg/L and 440 to 17,406 mg/L respectively. Overall, about 18%, 87% and 94% of the groundwater, and 10%, 92% and 56% of the surface waters possessed higher concentrations of As, TDS, and Cl, respectively. The higher levels of Cl in the samples are attributed to subsurface seawater intrusion in the delta. Analysis results and GIS mapping of water quality parameters revealed that in most of the delta, the quality of water was not suitable for drinking and agricultural purposes, thus should be properly treated before its use.
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The importance of atmospheric correction is pronounced for retrieving physical parameters in aquatic systems. To improve the retrieval accuracy of trophic level index (TLI), we built eight models with 43 samples in Wuhan and proposed an improved method by taking atmospheric water vapor (AWV) information and Landsat-8 (L8) remote sensing image into the input layer of radical basis function (RBF) neural network. All image information taken in RBF have been radiometrically calibrated. Except model(a), image data used in the other seven models were not atmospherically corrected. The eight models have different inputs and the same output (TLI). The models are as follows: (1) model(a), the inputs are seven single bands; (2) model(c), besides seven single bands (b1, b2, b3, b4, b5, b6, b7), we added the AWV parameter k1 to the inputs; (3) model(c1), the inputs are AWV difference coefficient k2 and the seven bands; (4) model(c2), the input layers include seven single bands, k1 and k2; (5) model(b), seven band ratios (b3/b5, b1/b2, b3/b7, b2/b5, b2/b7, b3/b6, and b3/b4) were used as input parameters; (6) model(b1), the inputs are k1 and seven band ratios; (7) model(b2), the inputs are k2 and seven band ratios; (8) model(b3), the inputs are k1, k2, and seven band ratios. We estimated models with root mean squared error (RMSE), model(a) > model(b3) > model(b1) > model(c2) > model(c) > model(b) > model(c1) > model(b2). RMSE of the eight models are 12.762, 11.274, 10.577, 8.904, 8.361, 6.396, 5.389, and 5.104, respectively. Model b2 and c1 are two best models in these experiments, which confirms both the seven single bands and band ratios with k2 are superior to other models. Results also corroborate that most lakes in Wuhan urban area are in mesotrophic and light eutrophic states.
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A new atmospheric correction (AC) method for aquatic application of metre-scale resolution (MR) optical satellite imagery is presented in this article, and demonstrated using images from the Pléiades constellation. MR satellites are typically operated privately and imagery can be costly. However in recent years, the price of individual acquisitions has dropped and their revisit times have improved, making them promising tools for remote sensing of inland and coastal waters. Due to the spatial resolution requirements of these satellites, the bands on the sensors are relatively wide (60–140 nm on Pléiades) in order to achieve an acceptable signal to noise ratio. This bandwidth and the limited number of bands can pose problems for the AC as the water signal may not be negligible in any band, especially over turbid waters. Since the MR sensors have a relatively narrow swath (20 km for Pléiades) the atmosphere can generally be assumed to be homogeneous over a scene or subscene. This assumption allows the atmospheric path reflectance (ρpath) to be estimated from multiple targets in the scene, which are selected according to the lowest observed top-of-atmosphere reflectances (ρTOA) in all bands. Rather than using pre-defined “dark” bands (e.g. in the NIR and SWIR) such as is common in other water-focused AC methods, the best band is selected automatically, i.e. the one yielding the lowest ρpath. This criterion avoids unrealistic negative (“overcorrected”) reflectances after the AC. Furthermore, for inland waters the NIR bands are usually affected by scattering from adjacent land and vegetation pixels, resulting in unrealistic ρpath when used in the AC. The spatial resolution of the sensors is used as an advantage here, since ground-level object shadows (e.g. from trees and buildings) can be spatially resolved and are usually the pixels selected by the automated procedure for the determination of ρpath. In fact, it is proposed that using these shadow pixels gives better performance than using any kind of water pixel for these broad-band MR sensors. The method is demonstrated using several Pléiades images, showing good performance in retrieval of the aerosol optical thickness (τa) for an urban (Brussels) and a coastal (Zeebrugge) site. Match-ups with water reflectances measured at the Zeebrugge AERONET-OC station show promising performance, although there is a significant spectral mismatch between the bands on the satellites and the CIMEL radiometer. Pléiades imagery of Zeebrugge reveals a turbid wake associated with the MOW1 measurement station, which opens perspectives of using MR satellites for the characterisation of monitoring and validation sites. Future work includes the application to other MR satellites (e.g. WorldView) and the evaluation for mass processing of open access high resolution (10–60 m) satellite data from Landsat and Sentinel-2.
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Water clarity (via the Secchi disk depth, SDD) is an important indicator of water quality and lake ecosystem health. Monitoring long-term SDD change is vital for water quality assessment and lake management. In this study, we developed and validated an empirical model for estimating the SDD based on Landsat ETM+ and OLI data using the combination of band ratio of the near-infrared (NIR) band to the blue band and the NIR band. Time series data of remotely estimated SDD in Lake Liangzi were retrieved from 2007 to 2016 using the proposed models based on forty Landsat images. The results of the Mann–Kendall test (p = 0.002) and linear regression (R2 = 0.352, p < 0.001) indicated that the SDD in Lake Liangzi demonstrated a significant decreasing trend during the study period. The annual mean SDD in Lake Liangzi was significantly negatively correlated with the population (R2 = 0.530, p = 0.017) and gross domestic product (R2 = 0.619, p = 0.007) of the Lake Liangzi basin. In addition, water level increase and the flood have an important effect on SDD decrease. Our study revealed that anthropogenic activities may be driving factors for the long-term declining trend in the SDD. Additionally, floods and heavy precipitation may decrease the SDD over the short term in Lake Liangzi. A declining trend in the SDD in Lake Liangzi may continue under future intense anthropogenic activities and climate change such as the extreme heavy precipitation event increase.
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We investigated possibility of predicting whether blooms, if they occur, would be formed of microcystin-producing cyanobacteria. DGGE analysis of 16S-ITS and mcyA genes revealed that only Planktothrix and Microcystis possessed mcy-genes and Planktothrix was the main microcystin producer. qPCR analysis revealed that the proportion of cells with mcy-genes in Planktothrix populations was almost 100%. Microcystin concentration correlated with the number of potentially toxic and total Planktothrix cells and the proportion of Planktothrix within all cyanobacteria, but not with the proportion of cells with mcy-genes in total Planktothrix. The share of Microcystis cells with mcy-genes was low and variable in time. Neither the number of mcy-possessing cells, nor the proportion of these cells in total Microcystis, correlated with the concentration of microcystins. This suggests that it is possible to predict whether the bloom in the Masurian Lakes will be toxic based on Planktothrix occurrence. Two species of toxin producing Planktothrix, P. agardhii and P. rubescens, were identified by phylogenetic analysis of 16S-ITS. Based on morphological and ecological features, the toxic Planktothrix was identified as P. agardhii. However, the very high proportion of cells with mcy-genes suggests P. rubescens. Our study reveals the need of universal primers for mcyA genes from environment.
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The potential risk from cyanobacteria blooms is the basis for predicting, preventing, and managing eutrophication. Poyang Lake lies on the southern bank of the middle and lower reaches of the Yangtze River. This lake is a large shallow lake connected to the Yangtze River and is affected by monsoon. The comprehensive evaluation index system, evaluation model, and method of the potential risk from cyanobacteria blooms were constructed based on the nutrient zoning in Poyang Lake, and the potential risk from cyanobacteria blooms was evaluated in 2013. (1) The evaluation index system comprises physical, chemical, and biological indicators. The physical indicators consist of blocking degree, lake region location, transparency (Secchi disk depth, SD), and temperature; the chemical indicators consist of total nitrogen (TN) and total phosphorus (TP); and the biological indicators consist of chlorophyll a (Chla) and phytoplankton biomass. Among the indicators, blocking degree and lake region location along with the prevailing wind direction were selected to represent the indicators affected by water retention time and wind direction. (2) We established a comprehensive evaluation method for assessing the potential risk from cyanobacteria blooms by adopting both analytic hierarchy process weighting and a comprehensive evaluation method. (3) Results show that the high-risk periods for cyanobacteria blooms were August, July, and December, and the high-risk regions were in the Northeastern Lake Region, Western Lake Region and Northern Lake Region. The Northeastern Lake Region is particularly in high risk in August and July. These cyanobacteria blooms presented heavy risk or close to heavy risk. Based on the risk evaluation indicators, outbreaks of cyanobacteria blooms are limited by temperature and location. Chla and phytoplankton biomass were the key indices affecting the level of potential risk from cyanobacteria blooms during the high-water-level period (July and August). In contrast, TN and TP are the key indices affecting the level of harm during the low-water-level period. Within a year, Chla, phytoplankton biomass, and TP are key indicators for the prediction of cyanobacteria blooms in Poyang Lake.
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Urban lakes play an important role in urban development and environmental protection for the Wuhan urban agglomeration. Under the impacts of urbanization and climate change, understanding urban lake-water extent dynamics is significant. However, few studies on the lake-water extent changes for the Wuhan urban agglomeration exist. This research employed 1375 seasonally continuous Landsat TM/ETM+/OLI data scenes to evaluate the lake-water extent changes from 1987 to 2015. The random forest model was used to extract water bodies based on eleven feature variables, including six remote-sensing spectral bands and five spectral indices. An accuracy assessment yielded a mean classification accuracy of 93.11%, with a standard deviation of 2.26%. The calculated results revealed the following: (1) The average maximum lake-water area of the Wuhan urban agglomeration was 2262.17 km2 from 1987 to 2002, and it decreased to 2020.78 km2 from 2005 to 2015, with a loss of 241.39 km2 (10.67%). (2) The lake-water areas of loss of Wuhan, Huanggang, Xianning, and Xiaogan cities, were 114.83 km2, 44.40 km2, 45.39 km2, and 31.18 km2, respectively, with percentages of loss of 14.30%, 11.83%, 13.16%, and 23.05%, respectively. (3) The lake-water areas in the Wuhan urban agglomeration were 226.29 km2, 322.71 km2, 460.35 km2, 400.79 km2, 535.51 km2, and 635.42 km2 under water inundation frequencies of 5%–10%, 10%–20%, 20%–40%, 40%–60%, 60%–80%, and 80%–100%, respectively. The Wuhan urban agglomeration was approved as the pilot area for national comprehensive reform, for promoting resource-saving and environmentally friendly developments. This study could be used as guidance for lake protection and water resource management.
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Satellite remote sensing can be an effective alternative for mapping cyanobacterial scums and aquatic macrophyte distribution over large areas compared with traditional ship's site-specific samplings. However, similar optical spectra characteristics between aquatic macrophytes and cyanobacterial scums in red and near infrared (NIR) wavebands create a barrier to their discrimination when they co-occur. We developed a new cyanobacteria and macrophytes index (CMI) based on a blue, a green, and a shortwave infrared band to separate waters with cyanobacterial scums from those dominated by aquatic macrophytes, and a turbid water index (TWI) to avoid interference from high turbid waters typical of shallow lakes. Combining CMI, TWI, and the floating algae index (FAI), we used a novel classification approach to discriminate lake water, cyanobacteria blooms, submerged macrophytes, and emergent/floating macrophytes using MODIS imagery in the large shallow and eutrophic Lake Taihu (China). Thresholds for CMI, TWI, and FAI were determined by statistical analysis for a 2010-2016 MODIS Aqua time series. We validated the accuracy of our approach by in situ reflectance spectra, field investigations and high spatial resolution HJ-CCD data. The overall classification accuracy was 86% in total, and the user's accuracy was 88%, 79%, 85%, and 93% for submerged macrophytes, emergent/floating macrophytes, cyanobacterial scums and lake water, respectively. The estimated aquatic macrophyte distributions gave consistent results with that based on HJ-CCD data. This new approach allows for the coincident determination of the distributions of cyanobacteria blooms and aquatic macrophytes in eutrophic shallow lakes. We also discuss the utility of the approach with respect to masking clouds, black waters, and atmospheric effects, and its mixed-pixel effects.
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For the past two decades, China’s urbanization has attracted increasing attention from scholars around the world. Numerous insightful studies have attempted to determine the socioeconomic causes of the rapid urban growth in Chinese cities. However, most of these studies regarded each city as a single entity, with few considering inter-city relationships. The present study uses a gravity-based model to measure the spatial interaction among city clusters in the Wuhan urban agglomeration (WUA), which is one of China’s most rapidly urbanizing regions. The effects of spatial interaction on urban growth area were also analyzed. Empirical results indicate that, similar to urban population or employment in secondary and tertiary industries in the WUA from 2000 to 2005, the spatial interaction among city clusters is one of the main drivers of urban growth. In fact, this study finds the effects of spatial interaction as the only socioeconomic factor that affected the spatial expansion from 2005 to 2010. This finding suggests that population migration and information and commodity flows showed greater influence than the socioeconomic drivers of each city did on promoting urbanization in the WUA during this period. We thus argue that spatial interaction among city clusters should be a consideration in future regional planning.
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Microcystis spp., which occur as colonies of different sizes under natural conditions, have expanded in temperate and tropical freshwater ecosystems and caused seriously environmental and ecological problems. In the current study, a Bayesian network (BN) framework was developed to access the probability of microcystins (MCs) risk in large shallow eutrophic lakes in China, namely, Taihu Lake, Chaohu Lake, and Dianchi Lake. By means of a knowledge-supported way, physicochemical factors, Microcystis morphospecies, and MCs were integrated into different network structures. The sensitive analysis illustrated that Microcystis aeruginosa biomass was overall the best predictor of MCs risk, and its high biomass relied on the combined condition that water temperature exceeded 24 °C and total phosphorus was above 0.2 mg/L. Simulated scenarios suggested that the probability of hazardous MCs (≥1.0 μg/L) was higher under interactive effect of temperature increase and nutrients (nitrogen and phosphorus) imbalance than that of warming alone. Likewise, data-driven model development using a naïve Bayes classifier and equal frequency discretization resulted in a substantial technical performance (CCI = 0.83, K = 0.60), but the performance significantly decreased when model excluded species-specific biomasses from input variables (CCI = 0.76, K = 0.40). The BN framework provided a useful screening tool to evaluate cya-notoxin in three studied lakes in China, and it can also be used in other lakes suffering from cyanobacterial blooms dominated by Microcystis.
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Cyanobacteria can form dense and sometimes toxic blooms in freshwater and marine environments, which threaten ecosystem functioning and degrade water quality for recreation, drinking water, fisheries and human health. Here, we review evidence indicating that cyanobacterial blooms are increasing in frequency, magnitude and duration globally. We highlight species traits and environmental conditions that enable cyanobacteria to thrive and explain why eutrophication and climate change catalyse the global expansion of cyanobacterial blooms. Finally, we discuss management strategies, including nutrient load reductions, changes in hydrodynamics and chemical and biological controls, that can help to prevent or mitigate the proliferation of cyanobacterial blooms.
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Chromophoric dissolved organic matter (CDOM) is an important optically active substance in aquatic environments and plays a key role in light attenuation and in the carbon, nitrogen and phosphorus biogeochemical cycles. Although the optical properties, abundance, sources, cycles, compositions and remote sensing estimations of CDOM have been widely reported in different aquatic environments, little is known about the optical properties and composition changes in CDOM along trophic gradients. Therefore, we collected 821 samples from 22 lakes along a trophic gradient (oligotrophic to eutrophic) in China from 2004 to 2015 and determined the CDOM spectral absorption and nutrient concentrations. The total nitrogen (TN), total phosphorus (TP), and chlorophyll a (Chla) concentrations and the Secchi disk depth (SDD) ranged from 0.02 to 24.75 mg/L, 0.002-3.471 mg/L, 0.03-882.66 μg/L, and 0.05-17.30 m, respectively. The trophic state index (TSI) ranged from 1.55 to 98.91 and covered different trophic states, from oligotrophic to hyper-eutrophic. The CDOM absorption coefficient at 254 nm (a(254)) ranged from 1.68 to 92.65 m-1. Additionally, the CDOM sources and composition parameters, including the spectral slope and relative molecular size value, exhibited a substantial variability from the oligotrophic level to other trophic levels. The natural logarithm value of the CDOM absorption, lna(254), is highly linearly correlated with the TSI (r2 = 0.92, p < .001, n = 821). Oligotrophic lakes are distinguished by a(254)<4 m-1, and mesotrophic and eutrophic lakes are classified as 4 ≤ a(254)≤10 and a(254)>10 m-1, respectively. The results suggested that the CDOM absorption coefficient a(254) might be a more sensitive single indicator of the trophic state than TN, TP, Chla and SDD. Therefore, we proposed a CDOM absorption coefficient and determined the threshold for defining the trophic state of a lake. Several advantages of measuring and estimating CDOM, including rapid experimental measurements, potential in situ optical sensor measurements and large-spatial-scale remote sensing estimations, make it superior to traditional TSI techniques for the rapid monitoring and assessment of lake trophic states.
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The mechanistic model reported in Lee et al. (2015) estimating the Secchi disk depth (ZSD) was applied to an oligo- to mesotrophic reservoir in Brazil. The model was originally validated with data covering lake, oceanic, and coastal waters; however, the model used the quasi-analytical algorithm (QAA) designed for optically deep waters as input and was applied to oceanic and coastal waters to derive absorption [a] and backscattering [bb] coefficients. The hypothesis is that the use of QAAv5 (http://www.ioccg.org/groups/Software_OCA/QAA_v5.pdf) to estimate both a and bb (step M1) to retrieve Kd (step M2) and ZSD (step M3) will lead to errors caused by M1 preventing an accurate estimate in oligo- to mesotrophic water. To test this hypothesis, data collected in three field trips were used to apply the mechanistic model based on the spectral bands from OLI/Landsat-8, (often applied to oceanic and coastal waters), and multispectral instrument (MSI)/Sentinel-2 bands (applied to QAA designed for very turbid inland water). The impact of step M1 over steps M2 and M3 was analyzed by the error analysis. The mean absolute percentage error (MAPE) for Kd using QAAv5 ranged between 10.35% and 19.76%, while the error using QAAM14 varied between 12.68% and 28.29%. Regarding the errors of step M3 and applying QAAv5, the total root-mean-square difference (RMSD) varied from 0.55 to 1.18 m and MAPE ranged between 12.86% and 31.17%, while the RMSD ranged between 0.70 and 1.50 m and MAPE varied from 14.33% to 39.13% when using QAAM14. However, the result from QAAv5 showed a better correlation with in situ data, although underestimating Kd and ZSD. Therefore, a modified version of QAAv5 (QAAR17) was evaluated. The results showed an improvement of Kd (MAPE ranging between 8.89% to 18.76%) and ZSD (RMSD ranging between 0.32 and 0.90 m and MAPE ranging between 8.65 and 19.75%), bringing the values close to the 1:1 line. The largest error was observed for the data of the second field trip, where the bio-optical properties showed a horizontal gradient along the reservoir. In addition, the magnitude of the remote sensing reflectance (Rrs) also varied depending on the water quality. Thus, with respect to ZSD mapping, this research showed that environments with a high variability in Rrs can limit the accurate estimation of inherent optical properties (IOPs) based on QAAv5. Therefore, the limiting step of the model was attributed to M1, which means that the mechanistic model from Lee et al. (2015) can be considered an universal approach if M1 is modified based on the type of water.
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Cyanobacteria blooms are a major environmental issue worldwide. Our understanding of the biophysical processes driving cyanobacterial proliferation and the ability to develop predictive models that inform resource managers and policy makers rely upon the accurate characterization of bloom dynamics. Models quantifying relationships between bloom severity and environmental drivers are often calibrated to an individual set of bloom observations, and few studies have assessed whether differences among observing platforms could lead to contrasting results in terms of relevant bloom predictors and their estimated influence on bloom severity. The aim of this study was to assess the degree of coherence of different monitoring methods in (1) capturing short- and long-term cyanobacteria bloom dynamics and (2) identifying environmental drivers associated with bloom variability. Using western Lake Erie as a case study, we applied boosted regression tree (BRT) models to long-term time series of cyanobacteria bloom estimates from multiple in-situ and remote sensing approaches to quantify the relative influence of physico-chemical and meteorological drivers on bloom variability. Results of BRT models showed remarkable consistency with known ecological requirements of cyanobacteria (e.g., nutrient loading, water temperature, and tributary discharge). However, discrepancies in inter-annual and intra-seasonal bloom dynamics across monitoring approaches led to some inconsistencies in the relative importance, shape, and sign of the modeled relationships between select environmental drivers and bloom severity. This was especially true for variables characterized by high short-term variability, such as wind forcing. These discrepancies might have implications for our understanding of the role of different environmental drivers in regulating bloom dynamics, and subsequently for the development of models capable of informing management and decision making. Our results highlight the need to develop methods to integrate multiple data sources to better characterize bloom spatio-temporal variability and improve our ability to understand and predict cyanobacteria blooms.
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Nutrient enrichment of aquatic ecosystems caused dramatic increase in the frequency, magnitude and duration of cyanobacterial blooms. Such blooms may cause fish kills, have adverse health effects on humans and contribute to the loss of biodiversity in aquatic ecosystems. Some 50 eutrophic to hypereutrophic ponds from the Brussels Capital Region (Belgium) were studied between 2003 and 2009. A number of the ponds studied are prone to persistent cyanobacterial blooms. Because of the related health concerns and adverse effects on ecological quality of the affected ponds, a tool for assessment of the risk of cyanobacterial bloom occurrence was needed. The data acquired showed that cyanobacteria have threshold relationships with most of the environmental factors that control them. This is negatively reflected on the predictive capacity of conventional statistical methods based on linear relationships. Therefore, classification trees designed for the treatment of complex data and non-linear relationships were used to assess the risk of cyanobacterial bloom occurrence. The main factors determining cyanobacterial bloom development appeared to be phytoplankton biomass, pH and, to a lesser degree, nitrogen availability. These results suggest that to outcompete eukaryotic phytoplankters cyanobacteria need the presence of environmental constraints: carbon limitation, light limitation and nitrogen limitation, for which they developed a number of adaptations. In the absence of constraints, eukaryotic phytoplankters appear to be more competitive. Therefore, prior build up of phytoplankton biomass seems to be essential for cyanobacterial dominance. Classification trees proved to be an efficient tool for the bloom risk assessment and allowed the main factors controlling bloom development to be identified as well as the risk of bloom occurrence corresponding to the conditions determined by these factors to be quantified. The results produced by the classification trees are consistent with those obtained earlier by probabilistic approach to bloom risk assessment. They can facilitate planning management interventions and setting restoration priorities.
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Various types of floating algae have been reported in open oceans and coastal waters, yet accurate and timely detection of these relatively small surface features using traditional satellite data and algorithms has been difficult or even impossible due to lack of spatial resolution, coverage, revisit frequency, or due to inherent algorithm limitations. Here, a simple ocean color index, namely the Floating Algae Index (FAI), is developed and used to detect floating algae in open ocean environments using the medium-resolution (250- and 500-m) data from operational MODIS (Moderate Resolution Imaging Spectroradiometer) instruments. FAI is defined as the difference between reflectance at 859 nm (vegetation “red edge”) and a linear baseline between the red band (645 nm) and short-wave infrared band (1240 or 1640 nm). Through data comparison and model simulations, FAI has shown advantages over the traditional NDVI (Normalized Difference Vegetation Index) or EVI (Enhanced Vegetation Index) because FAI is less sensitive to changes in environmental and observing conditions (aerosol type and thickness, solar/viewing geometry, and sun glint) and can “see” through thin clouds. The baseline subtraction method provides a simple yet effective means for atmospheric correction, through which floating algae can be easily recognized and delineated in various ocean waters, including the North Atlantic Ocean, Gulf of Mexico, Yellow Sea, and East China Sea. Because similar spectral bands are available on many existing and planned satellite sensors such as Landsat TM/ETM+ and VIIRS (Visible Infrared Imager/Radiometer Suite), the FAI concept is extendable to establish a long-term record of these ecologically important ocean plants.
Predicting cyanobacteria dominance in lakes
  • Downing
Downing, J.A., Watson, S.B., McCauley, E., 2001. Predicting cyanobacteria dominance in lakes. Can. J. Fish. Aquat. Sci. 58 (10), 1905-1908. https://doi.org/10.1139/f01-143.