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Running Head: A method for evaluating PPG-based HRV devices
When is it good to use wristband devices to measure HRV?: Introducing a new method for
evaluating the quality of data from photophlethysmography-based HRV devices
William S. Ryan
University of Toronto, St. George
James Conigrave
Geetanjali Basarkod,
Joseph Ciarrochi,
& Baljinder K. Sahdra
Institute for Positive Psychology and Education, Australian Catholic University
Author Notes:
Correspondence concerning this article should be addressed to William S. Ryan, Department of
Psychology, University of Toronto, St. George, 100 St. George St. Sidney Smith Hall
Toronto, ON M5S 3G3. Email: thewillryan@gmail.com. Phone: 647-551-0496.
The authors declare that they have no conflicts of interest.
Running Head: A method for evaluating PPG-based HRV devices
Abstract
Objective: Recent technological advances have led to the proliferation of ambulatory devices for
non-invasively assessing cardiac activity. While these devices have exciting implications for
conducting research outside the laboratory, it is critical that this increased mobility does not
compromise data quality. As a test case, we assess the efficacy of Empatica’s E4, a high-end
wristband device designed to assess Heart Rate Variability (HRV) through the use of
photoplethysmography. Approach: We compare the E4 to traditional, wired electrocardiogram
measures across a variety of conditions, including seated, supine, and standing baselines, as well
as typing and grip strength tasks. Most importantly, we introduce and demonstrate the efficacy of
a new method for determining the amount of error in HRV estimates derived from the E4 and a
technique for adjusting error tolerance. Main Results: Results indicate that the E4 is severely
compromised by motion artifact, resulting in a high percentage of missing data across all
conditions except seated and supine baselines. Employing error adjustment yielded more robust
results, but at the cost of significantly reducing sample size where motion artifact was present.
Significance: These results call into question the wristband’s efficacy as an HRV measurement
tool in most in-vivo conditions. We recommend that researchers interested in using
photoplethysmography-based HRV devices use caution and evaluate the data quality using
methods for error detection and tolerance, such as the one presented here.
Keywords: heart rate variability, ambulatory photoplethysmography, electrocardiogram.
A method for evaluating PPG-based HRV devices
3
When is it good to use wristband devices to measure HRV?: Introducing a new method for
evaluating the quality of data from photophlethysmography-based HRV devices
Recent technological advances have led to the proliferation of ambulatory devices for
non-invasively assessing cardiac activity. Wristband devices, in particular, have become popular
for tracking heart rate as well as other fitness-related parameters such as daily activity and
calories burnt. The majority of these devices are developed for the consumer market, although
some, like Empatica’s E4 (http://www.empatica.com), are designed specifically with
physiological research in mind, including measurement of heart rate variability (HRV). These
wearable devices have important implications for physiological research as they enable data
collection outside of the laboratory, allowing for the measurement of physiological activity as it
occurs in reaction to real-life situations (e.g Muaremi, Arnrich, & Tröster, 2013). Wristband
devices are also relatively inexpensive and significantly more comfortable than traditional, lab-
based cardiac measures, facilitating the collection of data from more participants over longer
periods of time. There is currently, however, little research examining the validity and reliability
of cardiac measures, such as heart rate variability (HRV) derived from wristband devices
(McCarthy, Pradhan, Redpath, & Adler, 2016; Ollander, Godin, Campagne, & Charbonnier,
2016). The present research seeks begins to fill this gap by introducing a new method of
evaluating the quality of data obtained from photoplethysmography (PPG)-based measurements
of HRV. As a test case, we compared HRV measures derived from Empatica’s E4
(http://www.empatica.com), a wristband device designed specifically for physiological research,
to those derived from traditional ECG. We then subjected the data obtained from E4 to our new
method of error detection to more closely evaluate the quality of data obtained from E4.
Heart Rate Variability
A method for evaluating PPG-based HRV devices
4
Heart rate variability (HRV) is a non-invasive means of assessing autonomic function,
with greater variability generally interpreted as indicating greater autonomic control (Berntson et
al., 1997; Porges, 2007; Saul, 1990). The variability in HRV refers to oscillations in the interval
between consecutive heartbeats or instantaneous estimations of heart rate. These varying
distances are referred to as inter-beat intervals (IBIs) and result from the relative activation
and/or inhibition of the sympathetic and parasympathetic branches of the autonomic nervous
system and their respective influences on the heart (Berntson, Cacioppo, & Quigley, 1991).
Under conditions of stress, sympathetic nervous system activation increases the firing rate of the
sino-atrial node, the heart’s pacemaker, increasing heart rate (Appelhans & Luecken, 2006). The
parasympathetic nervous system, acting primarily via vagal innervation of the heart, has an
opposing, inhibitory effect on sino-atrial node firing, acting as a break to slow down heart rate
(Katona & Jih, 1975; Bertsch, Hagemann, Naumann, Schächinger, & Schulz, 2012). Heart rate
variability results from the co-activation, co-inhibition, or the activation of one and inhibition of
the other of the parasympathetic and sympathetic branches (Bernston et al., 1991). These two
branches of the ANS operate in concert to adaptively and dynamically regulate cardiac function
in response to changing circumstances and external stimuli (Acharya, Joseph, Kannathal, Lim, &
Suri, 2006).
Vagal innervation is impacted by the respiration cycle; it is suppressed on inhalation
leading heart rate to fluctuate as the vagal break is turned on and off with exhalation and
inhalation, respectively. Variability within the respiration frequency band is termed respiratory
sinus arrhythmia (RSA) and is used to index vagal efferent activity, or vagal tone, non-invasively
(Grossman & Taylor, 2007). Greater variability in RSA equates with greater vagal strength or
tone (Bertsch, et al., 2012; Grossman & Taylor, 2007) and is associated with a host of positive
A method for evaluating PPG-based HRV devices
5
socioemotional outcomes such as connectedness, positive emotions, interpersonal style,
attention, and working memory (e.g. Kok & Fredrickson, 2010; Thayer, Hansen, Saus-Rose, &
Johnson, 2009).
Due to the non-invasive nature of RSA, or high frequency HRV, it is assessed in a wide
variety of domains. Initially, HRV was primarily utilized for its clinical applications, as a means
of indexing cardiac health and disease (e.g. Akselrod, et al., 1981; Carney, et al., 2001; Guzzetti,
et al., 1988; Kamath & Fallen, 1995; Pagani, et al., 1986; Masi, Hawkley, Rickett, & Cacioppo
2007; Thayer & Lane, 2007). It has also been employed to monitor individuals with diabetes
(Ewing, Borsey, Bellavere, & Clark, 1981), detect renal failure (Akselrod, Eliash, Oz, & Cohen,
1987), track physical fitness (Davy, DeSouza, Jones, & Seals, 1998), diagnose sleep disorders
(Drinnan, Allen, Langley, & Murray, 2000), track sleep quality (Elsenbruch, Harnish, & Orr,
1999), and assess the impact of tobacco smoke (Pope, et al., 2001) and alcohol (Malpas,
Whiteside, & Maling, 1991) on cardiac function. For a review of physiological applications of
HRV, see Acharya, et al. (2006).
More recently, HRV has also been used to assess a growing number of
psychophysiological processes and outcomes related to cardiovagal control, including attention
(Porges, 1992), emotion regulation (Calkins & Johnson, 1998), self-regulation (Geisler, Kubiak,
Siewert, & Weber, 2013), stress reactivity (Fabes & Eisenberg, 1997), anxiety (Friedman, 2007),
depression (Chambers & Allen, 2002; Rottenberg, 2007), group affiliation (Sahdra, Ciarrochi &
Parker, 2015), and wise reasoning (Grossmann, Sahdra & Ciarrochi, 2016), among others. HRV
has been examined as both a trait-like individual difference variable and a state-like variable that
fluctuates within and between persons in relation to specific circumstances, tasks, or
interventions (e.g. Miu, Helman, & Miclea, 2009). The popularity of HRV measures is due
A method for evaluating PPG-based HRV devices
6
largely to the fact that they are relatively easy to collect, non-invasive, and reproducible (Ge,
Srinivasan, & Krishnan, 2002; Kleiger, et al., 1991).
Metrics of Heart Rate Variability
Thus far, we have discussed HRV as if it were a unified construct. However, there are
multiple methods for calculating HRV from a given cardiac signal that reflect different
components of autonomic control over the cardiovascular system. Most common in
psychophysiological research are methods that operate in the time domain and those that operate
in the frequency domain (for comprehensive review of all HRV calculation methods see Allen,
Chambers, & Towers, 2007).
Time domain measures. These examine the intervals between each QRS complex in the
ECG wave directly. These intervals are calculated based on the time between successive R-peaks
and are referred to as RR intervals, inter-beat intervals (IBIs), or normal-to-normal (NN)
intervals (see Figure 1). Statistical parameters can then be calculated using the NN intervals as
input data. Assessed in milliseconds, these time-based measures are the simplest to calculate and
at their most basic include mean heart rate and mean NN interval (Stein & Kleiger, 1999).
Additional parameters that reflect the variation in IBIs may also be calculated from the NN time
series data itself. For example, SDNN, one of the most common time-based measures of HRV, is
simply the standard deviation of the NN intervals (Murray et al., 1975). SDNN estimates overall
HRV and reflects both short and long-term variation in the timing of cardiac cycles when
measured over a long period of time. Critically, SDNN values are heavily dependent on the
length of the recording and so must be interpreted with caution when comparing across studies
with different designs (Ewing et al., 1981; Saul, Albrecht, Berger, & Cohen, 1987). It is,
therefore, recommended that recordings be standardized to 5 minutes in length (Task Force of
A method for evaluating PPG-based HRV devices
7
the European Society of Cardiology and the North American Society of Pacing and
Electrophysiology, 1996). To estimate just the long-term components, the standard deviation of
the average NN intervals calculated over 5-minute periods of time (SDANN) may be used
(Acharya, et al., 2006).
Statistical parameters can also be calculated based on the differences between adjacent
intervals. These include the standard deviation of successive differences between NN intervals
(SDSD) and the root mean square of successive difference intervals (RMSSD; Acharya, et al.,
2006, Allen, et al., 2007). Of these difference-based measures, RMSSD is recommended for its
statistical properties and because it reliably estimates short-term variation in the timing of
cardiac cycles (Task Force, 1996).
Spectral Analysis. Heart rate variability can also be examined within specific frequency
ranges, allowing the researcher to home in on specific influences on the variability, such as
respiration. Here the IBI series is subjected to a Fourier transform or autoregressive modeling to
represent it in the frequency domain. This method is often termed spectral analysis as it yields a
power spectrum, the specific frequency bands of which can then be examined. Activity in the
low frequency range (0.04-0.12 Hz) is associated with activity of the baroreflexes (Goldstein,
Bentho, Park, & Sharabi, 2011) and is posited by some researchers to index sympathetic tone
especially when measured over long periods of time (Pagani et al., 1997). Fluctuations in the
high frequency range (0.12-0.4 Hz) reflect the impact of parasympathetic nervous system activity
on heart rate via the vagus nerve (Berntson, et al., 1997; Akselrod, et al., 1981). Power in this
range is believed to be indicative of a relatively stable autonomic disposition (Bertsch et al.,
2012; Thayer et al., 2009) and has been linked with a host of positive traits and outcomes related
to socio-cognitive functioning (e.g. Appelhans & Luecken, 2006; Thayer et al., 2009).
A method for evaluating PPG-based HRV devices
8
Examining the full frequency range, or total power, provides an estimate of overall variability
and overall autonomic activity and is highly correlated with SDNN (Task Force, 1996).
Collecting Heart Rate Variability Data
Electrocardiogram. HRV is traditionally assessed using an electrocardiogram (ECG),
which records the electrical activity of the heart using bipolar sensors placed along Einthoven’s
triangle (Einthoven, Fahr, & De Waart, 1913). The resulting ECG waveform reflects changes in
voltage associated with the various phases of the cardiac cycle. Specifically, the QRS complex
indicates ventricular depolarization and its peaked shape makes it a robust and easily identified
index of cardiac chronotropy. The distance between the R peaks in milliseconds form the inter-
beat interval (IBI) series that is used to calculate the majority of HRV metrics (see Figure 1).
Traditionally, ECGs have been rather cumbersome hospital or lab-bound devices. While
these are suitable for many types of clinical and other research, being tethered restricts options
for monitoring people long-term and conducting longitudinal and ecologically valid research. For
this reason, ECGs themselves have become increasingly ambulatory (Sandercock, Shelton,
Bromley, & Brodie, 2004; Koudstaal, van Gijn, Klootwijk, vad der Meche, & Kappelle, 1986;
Jaboudon, Sztajzel, Sievert, Landis, & Sztajzel, 2004), with some applications integrating ECG
sensors into textiles in the form of sensorized t-shirts (Paradiso, Faetti, & Werner, 2011). Despite
their designation as ambulatory devices, many of these wearable ECGs are highly sensitive to
motion artifact (Romero, et al., 2011), leading many to recommend data collection during sleep
(e.g., Muaremi, et al., 2013) and driving research into motion correction algorithms (e.g.
Alqaraawi, Alwosheel, & Alasaad, 2016).
Photoplethysmography. Interest in the ambulatory measurement of cardiovascular
activity and autonomic function has driven research into alternative assessment methods. One of
A method for evaluating PPG-based HRV devices
9
the most promising of these new methods is the estimation of cardiac chronotropy using pulse
signals or photoplethysmography (PPG) (e.g., Schäfer & Vagedes, 2013; Bolanos, Nazaran, &
Haltiwanger, 2006). PPG methods detect blood volume pulse (BPV) or variation in the volume
of atrial blood in the microvasculature of peripheral tissues resulting from the cardiac cycle
(Challoner, 1979). This is accomplished by shining a small LED light on the wrist, fingertip,
earlobe, or forehead and then measuring how much of that light is either absorbed or reflected
(depending on whether transmission or reflection PPG is being done). When blood volume is
greater, more light is absorbed, meaning that there is less light available to be detected by the
PPG sensor. In this way, changes in blood volume can be tracked to reflect the number and
timing of cardiac cycles (Kamal, Harness, Irving, & Mearns, 1989), allowing for the calculation
of pulse rate and pulse rate variability (PRV). The peaks of the PPG wave can be used just like
the R-peaks of the ECG waveform to estimate the number of heartbeats as well as the intervals
between them (IBIs). The primary difference between the two types of measurement is pulse
transit time (PTT), or the time it takes for the pulse wave to travel from the heart to the periphery
(Jago & Murray, 1988). Thus, PRV and HRV measures should yield highly similar results.
Indeed, research indicates that the two measures are highly correlated, especially when
assessed at rest among healthy participants (Foo & Wilson, 2006; Schäfer & Vagedes, 2013; Lu,
Yang, Taylor, & Stein, 2009; Rauh, Limley, Bauer, Radespiel-Troger, & Mueck-Weymann,
2004). For example, using a finger pulse oximeter to assess PPG alongside a traditional ECG,
Jeyhani, Mahdiani, Peltokangas, and Vehkaoja (2015) found PPG- and ECG- derived HRV
metrics to be highly correlated with one another, with the exception of the pNN50 metric.
Importantly, the majority of these studies have examined correspondence between the
two methods under relatively motion-free conditions. Indeed, Gil and colleagues (Gil, et al.,
A method for evaluating PPG-based HRV devices
10
2010) were among the first to test the efficacy of PPG-derived HRV under non-stationary
conditions. While these authors did find good correspondence between the two methods, the
non-stationary condition assessed was the tilt-table test in which the participant moves very little
volitionally, but rather, is positioned at different degrees of inclination by a moving table (Julu,
Cooper, Hansen, & Hainsworth, 2003). Lu and Yang (2009) conducted a similar comparison of
traditional ECG and PPG measured at the fingertip. They found that when high quality PPG data
were obtained, HRV values from the two methods were highly correlated. However, data were
not always usable; motion artifact prevented analysis of PPG data from a significant number of
participants. While these results may appear somewhat surprising given that participants were
instructed to sit still for the duration of each 5-minute recording epoch, this finding is consistent
with other researchers’ concerns regarding the high sensitivity of PPG to motion artifact (Allen,
2007).
In part because of problems with motion artifact and partly in an effort to maximize
comfort when worn long-term, there has been increasing research into measuring PPG using
wristband devices (Garbarino, Lai, Bender, Picard, & Tognetti, 2014; Tamura, Maeda, Sekine, &
Yoshida, 2014). Arberet and colleagues (2013) compared HRV measured by a wrist PPG sensor
(CSEM propriety wrist monitor) to traditional ECG-derived HRV assessed overnight and found
the two measures to correlate at approximately .90 for both temporal and spectral HRV metrics.
While high, these correlations were based on data obtained during sleep when presumably
participants were moving very little, almost certainly much less than they would move during the
day.
Renevey, Vetter, Krauss, Celka, and Depeursinge (2001) developed and tested a similar
wrist-based PPG device with an accelerometer. Using their motion correction algorithms, they
A method for evaluating PPG-based HRV devices
11
found acceptable rates of error during both baseline and physical activity (running). However,
data were collected only over 10-second intervals. Preejith, Annamol, Jayaraj, & Mohanasankar
(2016) tested another, similar wristband device and also found a high degree of correlation with
traditional ECG. This study, however, was conducted in a hospital setting and data were
collected for only 20 seconds at a time. Still, motion artifact was noted as an issue.
In this climate of growing interest in wrist-worn PPG devices for HRV measurement,
many devices have been introduced in the market. Consider, for example, the Empatica E4, the
latest model of Empatica wristbands. The E4 developed by Empatica (www.empatica.com) is
designed for use by researchers interested in tracking these measures over time and outside of the
laboratory. The device is somewhat similar in appearance to the Fitbit, Apple watch, and other
commercially available health tracking devices worn on the wrist. However, it is notably larger
than these commercial models and does not have a display screen. A primary difference between
the E4 and these more commonly used devices is that, with the E4, it is possible for the
researcher or user to gain access to the full time-series of data rather than only summary
statistics. Although not discussed in this paper, the E4 can also assess electrodermal activity
(EDA) by applying a very low (8 Hz) alternating current to the inside of the wrist and assessing
resistance. In addition, the E4 also contains an accelerometer that detects motion along 3 axes
(X, Y, Z).
The E4 is marketed specifically to researchers as a “wearable wireless device designed
for continuous, real-time data acquisition in daily life” for assessing HRV under various
conditions in and outside of the laboratory (www.Empatica.com). However, for researchers
interested in using the E4 for its advertised purpose, there is a dearth of peer-reviewed studies
demonstrating its validity as a turnkey tool for continuous measurement of HRV in different
A method for evaluating PPG-based HRV devices
12
contexts. Empatica’s previous model, the E3, was touted as an improvement on finger-based
measures, especially during tasks employing minimal wrist motion such as typing (Garbarino, et
al., 2014), and the E4, presumably, is an improvement on the E3. Like other commercially
available wristband devices, the E3 and the E4 utilize an accelerometer paired with proprietary
algorithms for detecting motion and removing data contaminated by motion artifact (Garbarino,
et al., 2014).
As far as we know, there are only three peer-reviewed published studies in which
researchers attempted to evaluate E4’s performance using different benchmarks. In one study by
McCarthy and colleagues (2016), participants wore the E4 and a Holter ambulatory ECG
monitor for 24 to 48 hours. A subset of 15-second overlapping segments of data were sampled.
The researchers indicated that over 85% of these segments contained usable data from both
devices. However, of the 15% of cases in which one device yielded poor quality data, this was
twice as likely to be due to failure of the PPG rather than the ECG. Importantly, the majority of
good quality data were collected during the night, presumably when motion was minimal.
In another attempt to test E4’s validity in a controlled lab context, Ollander and
colleagues (2016) compared the E4 with classic ECG and finger conductivity electrodes during a
social stress task. They found that the E4 failed to detect a significant number of inter-beat
intervals, while time-domain features (i.e. heart rate) were accurately estimated. However, as
only seven participants (one male) were included in this study, more work is needed to establish
the reliability and generalizability of these results. Similarly, Corino, Matteucci, and Mainardi
(2007) examined the E4’s performance in a highly controlled context. They analyzed BVP
signals from the E4 to develop algorithms for detecting atrial defibrillation. Recordings were
obtained at rest but only 2 minutes of a 10-minute segment were analyzed. Critically, this study
A method for evaluating PPG-based HRV devices
13
did not assess the reliability of the E4 during daily activities that include motion. While
promising, these preliminary studies on the E4 do not show a systematic comparison of the E4’s
performance across different conditions, as compared to the performance of the gold-standard
classic ECG-based measurement of HRV in the same conditions.
Present Research
The purpose of this study is to devise a method for evaluating the quality of HR and HRV
data obtained using a purportedly research-grade wristband device that utilizes reflective PPG to
monitor cardiac chronotropy. We employ Empatica’s latest model, E4 as test case, but our
method is general enough to be applied to similar data obtained by other wrist-band devices if
the raw data is accessible to researchers. The E4 has strong promise as a tool for researchers
wishing to assess cardiovascular functioning with minimal, non-invasive equipment and outside
the laboratory. However, although research has been done to confirm the safety and validity of
these devices (McCarthy et al., 2016; Ollander, et al., 2016), little has been done to validate
derived measures across a variety of contexts (including those that require movement) and in
large samples.
The goal of the present research is to conduct such validation tests using traditional
methods of correlating the data obtained from the test device with simultaneous data obtained
from a gold-standard device. Additionally, we also aim to test our new method for a more fine-
grained evaluation of the quality of data obtained from these devices. Specifically, we first
compare heart rate (HR) and heart rate variability (HRV) values derived from the E4 to those
obtained from a traditional ECG (Biopac, Goleta, CA), when collecting data simultaneously with
both systems. Previous research testing the validity of the E4 has utilized data collected
continuously over the course of a day (or more) during which undifferentiated activity has
A method for evaluating PPG-based HRV devices
14
occurred, or has assessed HRV in relation to just one specific stress test. The current research
improves on these methods by systematically comparing measures derived by the E4 and a
traditional, wired ECG system across a variety of conditions. Specifically, participants’ HRV
was assessed during standing, seated, and supine rest, as well as during computer and grip
strength tasks. We selected these conditions to reflect postures and tasks that people are likely to
engage in both within and outside the laboratory. This allows us to examine the reliability and
validity of the E4 under conditions most likely to be relevant to researchers and to assess the
effects of these tasks and postures on motion artifact.
Equally importantly, the present study contributes to the literature on ambulatory HRV
measures by offering a new method (as detailed below) for determining the amount of error in
HRV estimates and for adjusting error tolerance. This method assesses the percentage of
heartbeats the device failed to detect. The researcher can then select a cutoff value, and exclude
all cases with missingness greater than this value. Employing these methods yields more robust
results than others have obtained using the proprietary algorithms included in the E4 software.
Method
Participants
A total of 78 undergraduates from the University of California, Santa Barbara
participated in this study. Informed consent was obtained from all participants before
commencing the study procedures and all participants were compensated with course credit.
Responses to the health screening form indicated that all participants were in good
cardiovascular health. Of the 78 total participants, 56 were women, 21 were men, and one
identified as genderqueer/non-binary. Participants ranged in age from 18 to 30 (M = 19.85, SD =
A method for evaluating PPG-based HRV devices
15
1.77) and were relatively ethnically diverse: 37.2% White, 20.5% Asian/Asian American, 20.5%
Latino/Latina, 10.3% Multi-racial, 3.8% Black/African American, 3.8% Arabic/Middle Eastern,
and 3.8% selected “other”.
Procedures
Upon arriving at the lab, a trained research assistant described the study procedures and
obtained informed consent from the participant. The research assistant then applied the
electrodes and wristband device (E4) necessary for the collection of relevant physiological
signals (see Measures & Materials section below). The participant then performed a 6-minute
seated baseline followed by two additional 3-minute baseline periods, one standing and one
supine (the order of the latter two baselines was counter-balanced). Next, participants completed
a computer-based survey assessing demographic information, well-being, and other psychosocial
variables. Given our goal of comparing physiological indices, we do not report on these
psychosocial variables in the present research. However, we do utilize the physiological data
collected while participants were completing these measures to assess the impact of the motion
of using a mouse and typing on resultant data. Participants then completed a hand-grip strength
task where they were instructed to squeeze a digital dynamometer as hard as possible three times,
each trial separated by approximately 10 seconds and at the signal of the experimenter.
Participants did this for both their dominant and non-dominant hands (order counter-balanced).
After this, the research assistant removed all sensors from the participant. Finally, the participant
was debriefed as to the purpose of the study, thanked, and dismissed.
Physiological Measures
Electrocardiograph (ECG). ECG signals were recorded continuously using a Biopac
MP150 system with ECG amplifier (Model ECG 100C) and a modified lead II electrode
A method for evaluating PPG-based HRV devices
16
configuration (Sherwood, et al., 1990). Data were integrated with a Biopac MP150 and stored
using Acknowledge software (version 4.3, Goleta, CA).
E4 wristband. The E4 wristband from Empatica was used simultaneously to assess PPG-
derived HRV. This device works by simply placing the watch-like wristband around either the
left or right wrist. For all participants it was placed on the dominant hand for the duration of the
study, except for when moved to the non-dominant wrist when testing grip strength of the
dominant hand (to reduce motion artifact). Data collected using the E4 was uploaded to
Empatica Connect, a secure site maintained by Empatica where the researcher can visualize and
download the data stream. Data were stored and identified using only a numeric string reflecting
the date and time when the data were collected.
Once data collection for all participants was complete, all data were downloaded from the
Empatica website as a series of zip folders. Using the statistical program, R (R Core Team,
2017), each .csv containing IBIs were combined into a single data frame. Using an experiment
log that noted the timing of each participant’s data collection, this data frame was then filtered to
create windows of analysis for each participant and each task. These resulting data frames were
then labeled and saved to .csv files for further analysis.
Computing HRV Measures. Each of these data streams was processed using Kubios 2.2
(Tarvainen, Niskanen, Lipponen, Ranta-aho, & Karjalainen, 2013), a software designed
specifically for HRV analysis. Using Kubios, the following time and frequency parameters of
cardiac function were calculated (among others) for the ECG as well as the E4 data:
1. Mean heart rate (meanhr)
2. SDNN
3. Total power (TP)
A method for evaluating PPG-based HRV devices
17
4. Power in the low frequency range (0.04-0.12 Hz) (LFP)
5. Power in the high frequency range (0.12-0.4 Hz) (HFP)
Calculating Missingness. In order to assess the quality of the E4-derived HRV data, we
created a metric called ‘missingness’. As estimates of heart rate are generally robust and highly
correlated across devices and across conditions, these can be used to estimate the number of IBIs
that should have been recorded. Missingness was then calculated by dividing the observed IBIs
by the expected number of heartbeats (meanhr * minutes). The observed IBIs were increased by
1, so that it could be compared to heart rate.
𝑚𝑖𝑠𝑠𝑖𝑛𝑔𝑛𝑒𝑠𝑠 =1−!
𝑂𝑏𝑠𝑒𝑟𝑣𝑒𝑑!𝐼𝐵𝐼𝑠 +1
𝑀𝑒𝑎𝑛ℎ𝑟∗𝑚𝑖𝑛𝑢𝑡𝑒𝑠!
The data was then filtered based on the degree of missingness. We tested and compared
thresholds for missingness. Data was filtered such that cases missing more than 35% and then
more than 25% of the heartbeats were excluded from analysis. Sample R code used to implement
this method can be found in Appendix A.
Results
We first matched session data to participants. After combining all data into a continuous
table, data were filtered to the timeframe in which participants completed tasks. As the E4 record
IBIs only when data quality is strong, in many cases participants had no recorded data. This was
especially problematic in tasks that had a shorter duration or those involving movement. IBIs
were recorded for 62 participants in the supine condition, 56 participants in the seated baseline
condition, 50 in the standing condition, 25 in the non-dominant grip condition, and 20 in the
dominant grip condition.
A method for evaluating PPG-based HRV devices
18
Pearson’s correlations were conducted comparing a range of HRV metrics obtained from
the E4 wristbands, to those obtained from the Biopac devices (see Table 1). While mean heart
rate was closely correlated in all conditions, the metrics of heart rate variability were not as
strongly correlated as one would expect from devices assumed to be measuring the same thing.
However, many files had large sequences where IBIs were not recorded due to poor signal.
Using our novel method of error detection discussed above, we next tested to see if correlations
between E4 and Biopac devices could be improved by excluding files with poor quality data.
Note that the same pattern of results emerged when calculating Spearman’s correlations, which
use rank ordering and are, therefore, less susceptible than Pearson’s correlations to artificially
inflated estimates due to potentially influential data-points or extreme values.
Filtering cases resulted in loss of data but a large increase in the correlation between
Biopac and E4 devices (see Tables 2 and 3). When missingness was less than .35, 15 cases were
lost from the baseline condition but the correlation between E4 and Biopac was improved from
.72 to .97. Decreasing the threshold further from .35 to .25 removed an additional 10 cases in the
baseline condition but the correlations were not greatly improved. In some conditions (grip and
standing conditions), relatively few participants had any useable data at a cutoff of .35. This
resulted in poorer correlations in the data between the E4 wristbands and the Biopac device.
Discussion
Minimizing motion artifact is a major challenge to the development of equipment to
reliably assess HRV and other indices of cardiovascular performance and health. Results of the
present study indicate that despite being designed specifically for ambulatory use, the E4, like
other devices for assessing HRV, still suffers from issues of motion artifact. Specifically, when
A method for evaluating PPG-based HRV devices
19
data were filtered to exclude cases where 35% or more of the E4 heartbeat data were missing, the
number of viable data points was reduced by almost half (or more) in all but the seated and
supine resting conditions. Setting the cutoff at 25% missingness yielded even fewer viable cases
across all conditions. In other words, the E4 performed best when participants were sitting or
lying still. However, even in these conditions, correlations between frequency-derived HRV
measures (HFP, LFP) assessed via the E4 and wired ECG were moderate to strong (.40 - .82).
Excluding cases that were missing more than 35% and more than 25% of heartbeats increased
these correlations to .86 to .97 and .85 to .98, respectively, but greatly reduced the number of
viable cases. When participants were standing or engaging in the typing task or grip task, data
quality suffered greatly such that excluding cases with missingness greater than 25% depleted
the number of viable cases to 15 or fewer, too few to produce reliable estimates of HRV.
The key contribution of this study is the technique for assessing error in HRV data
collected with the E4 or other PPG-based wristbands, and for determining and implementing cut-
off values for error tolerance. Estimating error directly, can help researchers to better evaluate
the quality of their data and exclude affected data, thus minimizing the impact of error on results.
In our sample, when error levels were adjusted to less than .25, the correlation between E4 and
wired-ECG derived measures of high frequency HRV for the standing condition increased from
.20 to .90. However, in doing so, data from more than half of the participants were excluded.
When applying error tolerance cutoffs to the typing data, virtually all data were rejected. It
remains to be seen whether other wristband devices of HRV measurement would do any better
than the test case of E4 we used in this study.
Wristband measures are appealing for their non-obtrusive nature and comfort. But due to
the frequent movement of hands and arms, other sites might be better than the wrist. Ambulatory
A method for evaluating PPG-based HRV devices
20
measures that strap around the chest or clip to the earlobe are being developed and may minimize
artifact. Given the problems with motion artifact, researchers are also focusing both on
improving hardware and improving algorithms for cleaning and processing data, to minimize the
influence of motion artifact. For example, efforts are being made to use accelerometers in
conjunction with motion artifact reduction algorithms to improve data quality (e.g., Han, Kim, &
Kim, 2007; Han & Kim, 2012; Kim, Ryoo, & Bae, 2007; Yousefi, Nourani, Ostadabbas, &
Panahi, 2014). Other researchers are examining linear prediction analysis (LPC) and wavelet
transformation techniques to reduce the impact of motion artifact and accurately estimate HRV
(Alqaraawi et al, 2016). As those developments occur, the HRV data quality will likely improve.
However, any new techniques or turnkey tools must be validated against the tried-and-tested
ECG-based method of calculating HRV, as we did in this study. The algorithm for error
detection and tolerance that we introduce in this paper is relatively simple to implement and can
be easily adapted by researchers to evaluate the quality of HRV data obtained from a wide
variety of ambulatory devices. We hope it will facilitate future research on ambulatory devices
for measuring HRV.
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Running Head: A method for evaluating PPG-based HRV devices
Table 1
Pearson’s correlations between data obtained from E4 and Biopac.
meanhr
sdnn
HFP
LFP
TP
N
Seated baseline
.949*
.768*
.72*
.656*
.835*
56
Dominant grip
.977*
.714*
.714*
.602*
.769*
20
Supine baseline
.988*
.839*
.817*
.400*
.760*
62
Non-dominant grip
.967*
.877*
.761*
.316
.671*
25
Standing baseline
.825*
.567*
.204
.633*
.404*
50
Typing
.938*
.337*
.642*
.329*
.54*
40
Note. meanhr = mean heart rate; HFP = high frequency power; LFP = low frequency
power; TP = total power; N = number of participants with data.
* p < .05.
Running Head: A method for evaluating PPG-based HRV devices
Table 2
Pearson’s correlations between data obtained from E4 and Biopac. Missingness <
.35
meanhr
sdnn
HFP
LFP
TP
N
Seated baseline
.992*
.948*
.970*
.880*
.976*
41
Dominant grip
.986*
.861*
.911*
.815*
.923*
12
Supine baseline
.987*
.924*
.859*
0.879*
.862*
52
Non-dominant grip
.911*
.908*
.720*
0.597*
.778*
14
Standing baseline
.997*
.928*
.898*
0.951*
.945*
20
Typing
-
-
-
-
-
2
Note. meanhr = mean heart rate; HFP = high frequency power; LFP = low frequency
power; TP = total power; N = number of participants with data.
* p < .05.
Running Head: A method for evaluating PPG-based HRV devices
Table 3
Pearson’s correlations between data obtained from E4 and Biopac. Missingness <
.25
meanhr
sdnn
HFP
LFP
TP
N
Seated baseline
.991*
.954*
.976*
.883*
.973*
31
Dominant grip
.998*
.944*
.615
-.225
.415
6
Supine baseline
.994*
.918*
.850*
.873*
.854*
48
Non-dominant grip
.933*
.813*
.519
.377
.242
9
Standing baseline
.999*
.954*
.917*
.960*
.954*
15
Typing
-
-
-
-
-
1
Note. meanhr = mean heart rate; HFP = high frequency power; LFP = low frequency
power; TP = total power; N = number of participants with data.
* p < .05.
A method for evaluating PPG-based HRV devices
35
Figure 1. Schematic diagram of ECG waveform with IBI or R-R intervals.