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Genomic Research and American Indian Tribal Communities in Oklahoma: Learning From Past Research Misconduct and Building Future Trusting Partnerships

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Research misconduct and consequential harms have been inflicted upon American Indian/Alaska Native communities for decades. To protect their people and culture and to retain oversight over research, many Native communities have established tribal health research and institutional review boards. The Treatment Options for Type 2 Diabetes in Adolescents and Youth (TODAY) Study showcases a successful, trusting research collaboration with tribal nations and academic investigators in Oklahoma. In 2006, the TODAY Study investigators proposed a modification of the study protocol to collect biological specimens from participants for genomic analyses and indefinite storage. Partnering American Indian tribal nations elected not to participate in the genomics collection and repository proposal. Reasons included 1) protection of cultural values, 2) concerns regarding community anonymity, 3) a potential threat to tribal services eligibility, 4) broad informed consent language, and 5) vague definitions of data access and usage. The nations believed the proposed genomics analyses presented a risk of harm to their people and nations without clear benefit. Since the 2006 proposal and the advancement of genomics research, many tribal communities in Oklahoma, appreciating the potential benefits of genomic research, are developing policies regarding oversight of/access to data and biological specimens to mitigate risks and provide members and communities with opportunities to participate in safe and meaningful genomic research.
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American Journal of Epidemiology
Published by Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health 2019. This
work is written by (a) US Government employee(s) and is in the public domain in the US.
Vol. 188, No. 7
DOI: 10.1093/aje/kwz062
Advance Access publication:
April 24, 2019
Special Article
Genomic Research and American Indian Tribal Communities in Oklahoma:
Learning From Past Research Misconduct and Building Future Trusting
Partnerships
Jennifer Q. Chadwick*, Kenneth C. Copeland, Dannielle E. Branam, Julie A. Erb-Alvarez, Sohail
I. Khan, Michael T. Peercy, Mark E. Rogers, Bobby R. Saunkeah, Jeanie B. Tryggestad, and David
F. Wharton
*Correspondence to Jennifer Chadwick, University of Oklahoma Health Science Center, 1200 North Childrens Avenue, Suite 4D,
Oklahoma City, OK 73104 (e-mail: jennifer-chadwick@ouhsc.edu).
Initially submitted August 9, 2018; accepted for publication March 4, 2019.
Research misconduct and consequential harms have been inicteduponAmericanIndian/Alaska Native communi-
ties for decades. To protect their people and culture and to retain oversight over research, many Native communities
have established tribal health research and institutional review boards. The Treatment Options for Type 2 Diabetes in
Adolescents and Youth (TODAY) Study showcases a successful, trusting research collaboration with tribal nations and
academic investigators in Oklahoma. In 2006, the TODAY Study investigators proposed a modication of the study pro-
tocol to collect biological specimens from participants for genomic analyses and indenite storage. Partnering American
Indian tribal nations elected not to participate in the genomics collection and repository proposal. Reasons included
1) protection of cultural values, 2) concerns regarding community anonymity, 3) a potential threat to tribal services eligi-
bility, 4) broad informed consent language, and 5) vague denitions of data access and usage. The nations believed the
proposed genomics analyses presented a risk of harm to their people and nations without clear benet. Since the 2006
proposal and the advancement of genomics research, many tribal communities in Oklahoma, appreciating the potential
benets of genomic research, are developing policies regarding oversight of/access to data and biological specimens
to mitigate risks and provide members and communities with opportunities to participate in safe and meaningful geno-
mic research.
American Indian research; American Indians; collaborative research; genomic research
Abbreviations: IRB, institutional review board; TODAY, Treatment Options for Type 2 Diabetes in Adolescents and Youth.
Historically, American Indians have endured higher inci-
dences of chronic diseases and greater health disparities
than other minority populations (1,2). From 1995 to 2006,
based on a cross-sectional analysis of data from the Behavioral
Risk Factor Surveillance System, national health statistics indi-
cated that diabetes in American Indians increased by 26.9%
and that the prevalences of obesity and diabetes among Ameri-
can Indian youth were higher than those in any other ethnic
group in the United States (3). Because of the alarming increase
in the prevalence of obesity and diabetes in this population, it
became imperative for American Indian communities to aggres-
sively address issues of diabetes prevention, research, and treat-
ment (4,5).
In 2002, the institutional review boards (IRBs) of the Cher-
okee Nation, the Chickasaw Nation, and the Choctaw Nation
of Oklahoma, the Oklahoma City Area Indian Health Service
IRB, and the Absentee Shawnee Tribal Research Board part-
nered with the investigators of the Treatment Options for
Type 2 Diabetes in Adolescents and Youth (TODAY) Study
(6), a National Institutes of Healthsupported pediatric diabe-
tes treatment trial designed to determine optimal treatment for
youth with type 2 diabetes (7). This collaboration was an effort
to maximize American Indian participant recruitment and to
monitor study execution, while also providing surveillance
and counsel for all TODAY Study publications (6). After
16 years, the TODAY Studys Native American research
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partnership continues to be an exceptional example of an
effective research collaborative model.
In 2006, the TODAY Study investigators proposed a proto-
col modication that would allow for the collection of biological
specimens from all study participants for genomic analyses,
with remaining samples to be stored indenitely in a National
Institutes of Healthsponsored repository. The TODAY Studys
partnering American Indian IRBs were notied regarding the
proposed modication. After thorough deliberation, all 4 Amer-
ican Indian IRBs and the Absentee Shawnee Tribal Research
Board elected not to approve the protocol modication that
would have allowed for the collection and storage of these bio-
logical specimens. The purpose of this report is to delineate the
reasons why the TODAY Studys American Indian partners
elected not to participate in the proposed genomic research col-
laboration portion of the TODAY Study and to describe their
present efforts to participate in future genomic and biorepository
research opportunities.
RESEARCH MISTRUST AND ETHICAL MISCONDUCT
American Indians have experienced great historical trauma
related to social, economic, cultural, and political injustices (8,9).
Research suggests that these injustices have contributed to higher
incidences of heart disease, cancer, obesity, and diabetes in
American Indian communities (2,3). Centuries of deception and
injustices by government agencies and researchers have resulted
in native communitiesdeveloping a deep-rooted mistrust and
fear of biomedical research. Research harm has included absent,
inappropriate, or insufciently specic informed consent; misin-
terpretation of data; misrepresentation of tribal culture; breaches
of privacy; mishandling of biological samples; false representa-
tion; and, in some cases, medical malpractice (1014). Often
American Indians were allegedly subjected to research without
regard for potential harm to individuals or their communities.
Some researchers would enter American Indian communities,
collect data, depart without community engagement, and then
publish negative ndings from their research, inicting harmful
imprints on the communitiessocial, economic, and cultural sys-
tems (1215).
American Indianstrepidations regarding research are long-
standing and well-founded, including their concerns related to
genomic research. In the past, some researchers have gathered
blood samples from American Indian participants without ade-
quate informed consent and/or conducted and published geno-
mic analyses without tribal approval (13,16). The most recent
incident of research injustice, which was highly publicized,
involved the Havasupai tribe, a small tribal nation located in Ari-
zonas Grand Canyon (17). The tribe asserts that researchers
from Arizona State University unethically collected and ana-
lyzed data and biological specimens, including samples for
genomic studies not described in the informed consent docu-
ment, and then shared the samples with other researchers, all
without seeking guidance and approval from tribal leaders (13,
18). These infractions occurred for decades until a tribal member
happened upon some of the results during a scienticpresenta-
tion. It is believed that around 23 publications were circulated
without ofcial Havasupai tribal approval (18). The Havasupai
tribe perceived some of the published data to be disparaging,
and believed it harmed their people and culture by contradicting
the tribes creation beliefs and linking tribal members and fami-
lies to schizophrenia and inbreeding genomic markers (13,18).
AMERICAN INDIAN RESEARCH OVERSIGHT
Oklahoma is home to 38 federally registered tribes, including
the Cherokee Nation, the Chickasaw Nation, the Choctaw
Nation of Oklahoma, and the Absentee Shawnee Tribe (17). As
sovereign nations, tribes have the unquestioned legal right and
authority to govern their people, including the right to approve
and monitor research conducted within their nations (1921).
Believing that academic research review boards do not, and can-
not, adequately assess the tribal community and cultural harm
committed in recent years, many tribes and nations have devel-
oped their own research review practices in order to protect their
people and communities from harm (2224). In the 1990s, the
Oklahoma City Area Indian Health Service developed an IRB
to assure the protection of American Indians from potential
research harms; this board currently provides research protec-
tion support to numerous tribal communities. In addition to
the Oklahoma City Area Indian Health Service, many tribal
nations have created tribal health research boards and/or tribe-
led IRBs. The rst Oklahoma American Indian tribe to create
a registered IRB was the Cherokee Nation. The Chickasaw
Nation and Choctaw Nation of Oklahoma soon followed with
their own registered IRBs, and the Absentee Shawnee Tribe cre-
ated a tribal research board. Currently there are approximately
28 tribal IRBs nationally registered with the US Department of
Health and Human ServicesOfce for Human Research Pro-
tections (25).
In addition to providing ethical protection, tribal review boards
also ensure that the research is of value to the tribal community
(24,26). Many tribes will only consider research that aims to
address tribally identied concerns. Protocols must specify all
potential benets and risks, not only for the individual but also
for the tribal community and nation. Many current tribal IRBs
require that the tribal nation and researcher agree beforehand on
who will own the study data. Presently some tribes only allow re-
searchers access to the data for the duration of the study and
require that, once the study concludes, the data be returned to the
tribal nation. Finally, most tribes require all presentations and
publications generated from the studysdatatobereviewedby
the tribal IRB before the research can be presented or published
(24,26).
TODAY STUDY GENOMIC RESEARCH
In 2006 (Figure 1), only 3 years after the Havasupai tribe
uncovered what they deemed unethical genomic research prac-
tices in their community, the TODAY Study investigators sub-
mitted to the American Indian partnering IRBs a protocol
modication seeking to collect genomic biological specimens
from TODAY Study participants for analyses and storage of
additional samples in a repository (13,27). The participants
were given the option to donate genomic biological specimens
without affecting their overall study participation.
The studys investigators believed that collection of genomic
samples would aid in future research related to the development
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of undiscovered diagnostic tests, treatments, and possible pre-
vention of diseases, especially diabetes; however, there was no
specied clinical use for the samples. The biological specimens
would rst be analyzed by TODAY Study investigators and
then, if consent was provided by the participants, stored inde-
nitely at the National Institute of Diabetes and Digestive and
Kidney Diseases Central Repository for future research studies
(27). The proposed modication was approved by all of the
studys participating academic IRBs. However, after careful
deliberation, all 5 partnering American Indian research boards
elected not to participate in the TODAY Studys collection of
genomic biological specimens or the repository. Each tribal na-
tions decision was made independently; however, many com-
mon concerns were raised.
One issue raised was whether the scienticbenets of the
genomic testing and repositoryparticipationoutweighedthe
risks to the individual participants and tribal culture. The collec-
tion of biological specimens for genomic analyses provided no
direct, immediate benet to the participant and/or the tribe; any
potential, yet-to-be-determined benet might be due to future
medical advances. Consent form wording stated that if a geno-
mic abnormality were to be discovered, individuals would not
be notied of the results, nor would any genetic education or
counseling be provided. Some tribal IRBs felt very strongly
that participants should be notied of abnormalities or, if poten-
tially benecial information was discovered, genetic counseling
should be made available.
The tribes concluded that participating in the study would
yield little to no immediate or direct benet; however, the risks of
participation appeared to be numerous. First, the tribes noted that
many American Indian people hold strong cultural values, be-
liefs, and concerns related to the collection, treatment, and
destruction of biological specimens. Also, maintaining con-
dentiality and anonymity in small tribal communities can be
difcult or impossible. Losing anonymity places study partici-
pants and their family members at greater risk of being identied
personally. In some cases, the discovery of genomic abnormali-
ties might affect families personally or socially and/or impact
their ability to obtain future employment, housing, and/or health
benets (2831).
For some American Indians, tribal membership is declared by
the tribe/nation, in agreement with the US Bureau of Indian Af-
fairs, through approved documented ancestry (32). The TODAY
Studys partnering IRBs were concerned that agreeing to open-
ended consent for genomic analyses might lead to questions
regarding an individuals family and tribal lineage, possibly re-
sulting in termination of the persons eligibility for services. Con-
sidering these risks and the fact that the proposed genomic tests
would be conducted on a vulnerable population (children), the
IRBs believed participation would pose a greater-than-minimal
risk to study participants (33).
The tribes did consider the potential, yet-to-be-discovered
benets of genomic analysis and repository storage of biologi-
cal specimens (i.e., clinical utility and the possibility of gene-
specic therapy or prevention, particularly for diabetes); how-
ever, they held great concerns regarding the safeguards needed
to allow such an endeavor (3436). Since the supplementary
research analyses were yet to be determined, it was unknown
whether the future analyses might include cultural/racial identi-
cation, mental health genetic markers, and other genetic cod-
ing analyses. After reviewing other tribesexperiences with
similar research analyses, the tribal partners felt that the unfore-
seen benets of medical advances did not outweigh the risks to
their people and culture.
Another concern was that the proposed protocol modica-
tionfailedtoallowanavenueinwhichsomeonesconsentto
participate could be withdrawn at a later date. After the samples
were deidentied, the TODAY Studys researchers would be
unable to identify and dispose of particular samples if a partici-
pant or tribe later wished to withdraw their consent for partici-
pation. In addition, the repository, by design, would store
samples for an undetermined length of time and could be used
for a myriad of research purposes. Allowing never-ending, irre-
versible consent for membersgenomic samples to be used for
undened research concerned the tribal IRBs, making it impos-
sible to monitor access to and usage of the biological specimens
and to approve subsequent analyses. Some tribal IRBs also
noted that use of tribal membersgenomic samples for future
proposed studies would require separate and individual tribal
leadership approval at that time.
Struggling with these issues, some tribal IRBs elected to
make a few, yet short-lived allowances. It is important to note
that the partnering American Indian IRBs weighed their con-
cerns against a participants inherent right to make his/her
own independent, informed decisions. They considered allow-
ing participants the opportunity to be approached for consent
for genomic sampling for the TODAY Studys analyses only,
15th–18th
Centuries
Colonization of the Americas introduced new diseases
and epidemics to the American Indians, including the
spread of smallpox and measles
19th
Century
Medical professionals inaccurately associated the cause
of a tuberculosis outbreak with American Indian culture
Early
1900s
Removal of upper and lower eyelids to treat trachoma in
American Indian patients
1950s
Alaska Natives given radiosotopes for research purposes,
including pregnant and lactating women, without known
benefit to subjects
1970s
Study examined sociological effects of alcohol on a
Native community—data reported in the press in a
stigmatizing and disparaging manner
US medical facilities sterilized American Indian females
without their knowledge or consent, in some cases
under threats of loss of benefits
1990s First American Indian tribal research board formed to
help reduce incidence of research injustices
2003
Havasupai Tribe became aware of genetic research
practices that included inadequate consent procedures
and improper use of genetic samples
2006
Treatment Options for Type 2 Diabetes in Adolescents
and Youth (TODAY) Study proposed to partner with tribal
nations to collect and store genomic samples for future,
undetermined studies
2019
Within trusting research relationships, some Oklahoma
tribes have cautiously begun participating in beneficial
genomic research
Figure 1. Historical timeline of research misconduct and development
of distrust between medical researchers and Native Americans and their
relationship to the formation of tribal research boards (815,24).
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followed by sample destruction at the conclusion of the study
and without allowing repository storage. For a short period of
time (6 months), the Choctaw Nation of Oklahoma IRB did
approve giving their members the opportunity to consent
regarding the TODAY Study genomic analyses only, without
allowing repository storage of the samples. However, after
reconsideration, the Choctaw Nation of Oklahoma IRB, still
uncomfortable with the possible risks, rescinded its approval.
The Oklahoma Area Indian Health Service IRB, which sup-
ports tribal nations and their views, also approved participa-
tion in the repository if all of the partnering tribes approved
the collection of the genomic samples. When all of the tribal
IRBs rejected the modication, the Oklahoma Area Indian
Health Service IRB withdrew its approval. In the end, the
tribal IRBs felt that potential risks to both the individual and
the tribal community, particularly regarding the repository,
outweighed the potential scienticbenet and took prece-
dence over an individuals right to decide.
CONSIDERATIONS FOR FUTURE GENOMIC RESEARCH
The partnering Oklahoma American Indian IRBs and tribal
research board concur that since 2006, the TODAY Study in-
vestigatorsproposed genomic-research protocol modication
has prompted them to explore developing guidelines regarding
genomic studies and biorepositories. Understanding the possi-
ble advances in genomic research and their potential benets
in the identication and treatment of many diseases, including
diabetes, tribal nations have a desire to ensure that their people
have opportunities to contribute to, and participate in, innova-
tive yet culturally appropriate research. Even though many of
the concerns raised by the partnering American Indian tribal
nations in 2006 have not been fully resolved, they believe that
through education and advocacy, both nationally and locally,
they are now prepared to consider genomic studies and biore-
pository research partnerships (3742).
Aware of successful genomic research partnerships, like the
Northwest-Alaska Pharmacogenomics Research Network and
the National Congress of American IndiansAmerican Indian
& Alaska Native Genetics Resource Center (supported by the
National Human Genome Research Institute), Oklahoma tribal
nations have made efforts to build similar partnerships in terms
of trusting genomic research allies (43). The Chickasaw Nation
recently partnered with the University of Oklahoma on another
project supported by the National Human Genome Research
Institutethe Center on American Indian and Alaska Native
Genomic Researchin an effort to understand implications of
genomic research and to develop a program to educate the com-
munity regarding the benets of participating in research (44).
Tribes from Oklahoma are also engaging in national conversa-
tions regarding ethical genomic research, including the National
Congress of American Indians and the Precision Medicine Initia-
tivesAll of Usresearch program, and are actively partnering
with the National Institutes of Healths Tribal Health Research
Ofce by serving on the Tribal Advisory Committee (3942).
Drawing from recent experiences and the national dialogue
regarding ethically appropriate genomic research, Oklahoma
tribal health boards/IRBs have implemented new strategies
(Figure 2) to allow their members safe access to innovative
research, including review of each study proposal on its own
merits in the context of a study investigators prior research
work and relationships with tribal communities. Such new pro-
posals often now require a formal contract/agreement with the
investigator and the institution before research can be approved
by the tribal nation(s). These contracts usually specify tribal
ownership of study data, the expectations of the research part-
nership, and a limitation on data analyses.
Learning from past research injustices, most tribal boards in
Oklahoma now require that all study consent forms include a
date on which consent and use of protected health information
expires; after the expiration date, researchers must seek IRB
reapproval for continued use of and access to protected health
information. Requiring a date of expiration also provides the
tribe with an estimated duration of time inwhich their research
oversight will be needed and assurance that the research data
will be analyzed and results reported in a timely manner.
Additionally, the proposal and consent form must specically
and clearly state the disease to be studied and how genomic
samples will be utilized. The proposal and consent form must
also explicitly describe all secondary uses of the specimens,
storage, security, and the time frame after which samples will
be destroyed or returned to the tribal nation. Furthermore, if a
secondary researcher unafliated with the original proposal is
interested in analyzing the biological specimens, a separate
research agreement must be made with the new investigator
and new IRB review and approval is required.
Recently, for example, the Chickasaw and Choctaw Nations
of Oklahoma completed a study with investigators from the
University of Oklahoma Health Science Center that included
Previous
Trusting
Relationship
With
Investigator Clear
Understanding
of Expectations
in Partnership,
Including Data
and Specimen
Ownership
Explicit
Description of
Usage, Storage,
and Security of
Specimens
Clearly State
Study Intent and
Utilization of
Samples in
Consent
Document
Projected Time
of Completion
and Agreement
for Return or
Destruction of
Data/Samples
Continuous
Communications
Throughout the
Project’s
Duration
Figure 2. Guidelines Oklahoma American Indian tribes consider
when approached to partner with medical researchers on biological
genomic research.
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genomic analyses (45). Parameters were dened and followed
that included allowing analyses of deidentied samples for
DNA methylation and for developing a tribe-approved adjudi-
cation process in order to safeguard data for future quality assur-
ance analyses (45). The Chickasaw and Choctaw Nations
believed their experience with the TODAY Study and other
tribal genomic research experiences prepared them to under-
stand the value of genomic research and specic research
parameters needed to address their nationsethical concerns.
As tribal nations in Oklahoma have developed internal poli-
cies regarding genomic research, many are beginning to rec-
ognize certain educational decits within their communities
with regard to genomic research (42,44). To address these
needs, some tribal nations have now partnered with academic
investigators to analyze and address their knowledge and
needs through questionnaires regarding genomic research.
For example, the Cherokee Nation recently partnered with in-
vestigators at the University of Oklahoma on a pilot study to
assess their communitys understanding of and openness to
genomics research (42). The Chickasaw Nation is also expand-
ing their understanding of community membersresearch
concerns and goals through the distribution of community
assessment questionnaires (44).
It is important to note that even with these new strategies and
polices, the TODAY Studys American Indian partners have
still not approved participation in the genomic portion of the
TODAY Study, believing that many of their initial concerns
have not yet been resolved completely. Regarding genomic
research in general, some Oklahoma American Indian research
boards remain hesitant, believing that many of their nations
concerns, some of which are described in this paper, have yet
to be addressed and that their communities still are not being
provided with adequate institutional respect. American Indians
unique and long-standing institutionalized research-related
trauma, if not acknowledged and addressed by research
professionals and institutions, may continue to deter tribal
people and communities from being fully engaged in the
potentially transformative benets of cutting-edge research,
including genomic research.
CONCLUSION
In 2006, the TODAY Studys Native American partnering
IRBs and health boards elected not to participate in the studys
proposed optional genomic analyses and biorepository storage
(27), based on each tribal nation/IRBs sovereign right to make
research decisions in the best interest of its nation and members
(20,21). Previous incidences of researchersabuse of commu-
nity trust and use of improper consent procedures played a role
in the TODAY Studys Native American partnersdecision to
not participate in the studys genomic research, as did a myriad
of other ethical questions and possible unforeseen ramications
of genomic analyses and biorepositories. After years of building
tribal/academic collaborations, fostering bidirectional commu-
nication, and establishing policies and procedures, genomic
research with American Indian communities in Oklahoma is
now cautiously emerging (3745).
ACKNOWLEDGMENTS
Author afliations: Department of Pediatrics, Section of
Diabetes and Endocrinology, University of Oklahoma
Health Sciences Center, Oklahoma City, Oklahoma
(Jennifer Q. Chadwick, Kenneth C. Copeland, Jeanie B.
Tryggestad); Heath Services Authority, Choctaw Nation of
Oklahoma, Durant, Oklahoma (Dannielle E. Branam, David
F. Wharton); Oklahoma City Area Indian Health Service,
Oklahoma City, Oklahoma (Julie A. Erb-Alvarez);
Department of Health Research, Cherokee Nation,
Tahlequah, Oklahoma (Sohail I. Khan); Department of
Health, Division of Research and Public Health, The
Chickasaw Nation, Ada, Oklahoma (Michael T. Peercy,
Bobby R. Saunkeah); and Tribal Health System, Absentee
Shawnee Tribe, Shawnee, Oklahoma (Mark E. Rogers).
This work was supported by funding from the National
Institute of Diabetes and Digestive and Kidney Diseases and
the Ofce of the Director, National Institutes of Health
(grants U01-DK61212, U01-DK61230, U01-DK61239,
U01-DK61242, and U01-DK61254); by funding from the
National Center for Research Resources General Clinical
Research Centers Program (grants M01-RR00036
(Washington University School of Medicine), M01-
RR00043-45 (Childrens Hospital Los Angeles), M01-
RR00069 (University of Colorado Denver), M01-RR00084
(Childrens Hospital of Pittsburgh), M01-RR01066
(Massachusetts General Hospital), M01-RR00125 (Yale
University), and M01-RR14467 (University of Oklahoma
Health Sciences Center)); and by National Center for
Research Resources Clinical and Translational Science
Awards (grants UL1-RR024134 (Childrens Hospital of
Philadelphia), UL1-RR024139 (Yale University),
UL1-RR024153 (Childrens Hospital of Pittsburgh),
UL1-RR024989 (Case Western Reserve University), UL1-
RR024992 (Washington University in St. Louis),
UL1-RR025758 (Massachusetts General Hospital), and
UL1-RR025780 (University of Colorado Denver)).
We gratefully acknowledge the participation and guidance
of the American Indian partners associated with the clinical
center located at the University of Oklahoma Health
Sciences Center, including members of the Absentee
Shawnee Tribe, the Cherokee Nation, the Chickasaw Nation,
and the Choctaw Nation of Oklahoma, and the Oklahoma
City Area Indian Health Service.
The following individuals and institutions constitute the
TODAY Study Group (an asterisk (*) indicates a principal
investigator or director): clinical centersBaylor College
of Medicine: S. McKay*, M. Haymond*, B. Anderson,
C. Bush, S. Gunn, H. Holden, S. M. Jones, G. Jeha,
S. McGirk, S. Thamotharan; Case Western Reserve
University: L. Cuttler*, E. Abrams, T. Casey, W. Dahms
(deceased), C. Ievers-Landis, B. Kaminski, M. Koontz,
S. MacLeish, P. McGuigan, S. Narasimhan; Childrens
Hospital Los Angeles: M. Geffner*, V. Barraza, N. Chang,
B. Conrad, D. Dreimane, S. Estrada, L. Fisher, E. Fleury-
Milfort, S. Hernandez, B. Hollen, F. Kaufman, E. Law,
V. Mansilla, D. Miller, C. Muñoz, R. Ortiz, A. Ward,
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K. Wexler, Y. K. Xu, P. Yasuda; Childrens Hospital of
Philadelphia: L. Levitt Katz*, R. Berkowitz, S. Boyd,
B. Johnson, J. Kaplan, C. Keating, C. Lassiter, T. Lipman,
G. McGinley, H. McKnight, B. Schwartzman, S. Willi;
Childrens Hospital of Pittsburgh: S. Arslanian*, F. Bacha,
S. Foster, B. Galvin, T. Hannon, A. Kriska, I. Libman,
M. Marcus, K. Porter, T. Songer, E. Venditti; Columbia
University Medical Center: R. Goland*, D. Gallagher,
P. Kringas, N. Leibel, D. Ng, M. Ovalles, D. Seidman; Joslin
Diabetes Center: L. Laffel*, A. Goebel-Fabbri, M. Hall,
L. Higgins, J. Keady, M. Malloy, K. Milaszewski, L.
Rasbach; Massachusetts General Hospital: D. M. Nathan*,
A. Angelescu, L. Bissett, C. Ciccarelli, L. Delahanty,
V. Goldman, O. Hardy, M. Larkin, L. Levitsky,
R. McEachern, D. Norman, D. Nwosu, S. Park-Bennett,
D. Richards, N. Sherry, B. Steiner; Saint Louis University:
S. Tollefsen*, S. Carnes, D. Dempsher, D. Flomo,
T. Whelan, B. Wolff; State University of New York Upstate
Medical University: R. Weinstock*, D. Bowerman,
S. Bristol, J. Bulger, J. Hartsig, R. Izquierdo, J. Kearns,
R. Saletsky, P. Trief; University of Colorado Denver:
P. Zeitler* (Steering Committee Chair), N. Abramson,
A. Bradhurst, N. Celona-Jacobs, J. Higgins, M. M. Kelsey,
G. Klingensmith, K. Nadeau, T. Witten; University of
Oklahoma Health Sciences Center: K. Copeland* (Steering
Committee Vice-Chair), E. Boss, R. Brown, J. Chadwick,
L. Chalmers, S. Chernausek, A. Hebensperger, C. Macha,
R. Newgent, A. Nordyke, D. Olson, T. Poulsen, L. Pratt,
J. Preske, J. Schanuel, S. Sternlof; University of Texas
Health Science Center at San Antonio: J. Lynch*,
N. Amodei, R. Barajas, C. Cody, D. Hale, J. Hernandez,
C. Ibarra, E. Morales, S. Rivera, G. Rupert, A. Wauters;
Washington University in St. Louis: N. White*, A. Arbeláez,
D. Flomo, J. Jones, T. Jones, M. Sadler, M. Tanner,
A. Timpson, R. Welch; Yale University: S. Caprio*,
M. Grey, C. Guandalini, S. Lavietes, P. Rose, A. Syme,
W. Tamborlane; Coordinating CenterGeorge
Washington University Biostatistics Center: K. Hirst*,
S. Edelstein, P. Feit, N. Grover, C. Long, L. Pyle; Project
OfceNational Institute of Diabetes and Digestive and
Kidney Diseases: B. Linder*; central unitsCentral Blood
Laboratory (Northwest Lipid Research Laboratories,
University of Washington): S. M. Marcovina*, J. Harting;
DEXA Reading Center (University of California at San
Francisco): J. Shepherd*, B. Fan, L. Marquez, M. Sherman, J.
Wang; Diet Assessment Center (University of South Carolina):
M. Nichols*, E. Mayer-Davis, Y. Liu; Echocardiogram
Reading Center (Johns Hopkins University):J.Lima*,S.
Gidding, J. Puccella, E. Ricketts; Fundus Photography
Reading Center (University of Wisconsin):R.Danis*,A.
Domalpally, A. Goulding, S. Neill, P. Vargo; Lifestyle
Program Core (Washington University):D.Wiley*, D.
Aldrich-Rasche, K. Franklin, C. Massmann, D. OBrien, J.
Patterson, T. Tibbs, D. Van Buren; other centersHospital
for Sick Children (Toronto, Ontario, Canada):M.Palmert;
MedStar Health Research Institute (Washington, DC):R.
Ratner; Texas Tech University Health Sciences Center:D.
Dremaine; University of Florida: J. Silverstein.
The content of this article is solely the responsibility of the
authors and does not necessarily represent the ofcial views
of the National Institutes of Health. The opinions expressed
in this paper are those of the authors and do not necessarily
reect the views of the respective Tribes or the Indian Health
Service.
Conict of interest: none declared.
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... Te design and results of the TODAY study have been previously described [6], with the primary outcome being loss of glycemic control, defned as a HbA1c ≥ 8% for 6 months, or sustained metabolic decompensation requiring insulin. Of note, the American Indian Tribal Nations that partnered with the TODAY study elected not to participate in the genomics collection [18]. ...
... We could not confrm the reported genetic associations infuencing glycemic response to metformin that have been found in adults, either because our sample size was not large enough to detect these associations based on the reported efect sizes or because genetic variation may infuence metformin response diferently in youth compared to adults with T2D. Another factor to consider is adherence to metformin which has been shown to be worse in younger populations compared to adults [18]. Our data here are from the original TODAY clinical trial where there was frequent contact with participants and where medication adherence was greater than 70% across all treatment arms and not found to be a factor associated with metformin treatment failure [25]. ...
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Metformin is the first-line treatment for type 2 diabetes (T2D) in youth but with limited sustained glycemic response. To identify common variants associated with metformin response, we used a genome-wide approach in 506 youth from the Treatment Options for Type 2 Diabetes in Adolescents and Youth (TODAY) study and examined the relationship between T2D partitioned polygenic scores (pPS), glycemic traits, and metformin response in these youth. Several variants met a suggestive threshold (P<1×10−6), though none including published adult variants reached genome-wide significance. We pursued replication of top nine variants in three cohorts, and rs76195229 in ATRNL1 was associated with worse metformin response in the Metformin Genetics Consortium (n = 7,812), though statistically not being significant after Bonferroni correction (P=0.06). A higher β-cell pPS was associated with a lower insulinogenic index (P=0.02) and C-peptide (P=0.047) at baseline and higher pPS related to two insulin resistance processes were associated with increased C-peptide at baseline (P=0.04,0.02). Although pPS were not associated with changes in glycemic traits or metformin response, our results indicate a trend in the association of the β-cell pPS with reduced β-cell function over time. Our data show initial evidence for genetic variation associated with metformin response in youth with T2D.
... The concerns mentioned by Navajo respondents were similar to those voiced by other American Indian (Chadwick et al., 2019) and Alaska Native (Hiratsuka et al., 2020a;Hiratsuka et al., 2020b) communities, namely that considerations for effective and socially responsible research partnerships should be taken into consideration. Past unethical practices which affected tribal communities (Bowekaty and Davis, 2003;Mello and Wolf, 2010) continue to drive many of the concerns that the Navajo community voiced. ...
... At the national level, there is an increase in community and tribally-based participatory research approaches to genetics and genetics-related research (Woodbury et al., 2019;Hiratsuka et al., 2020c), ethical research frameworks , and tribal control over health-related research (Hiratsuka et al., 2017;Around Him et al., 2019;Chadwick et al., 2019). These are attempts to rectify the concerns expressed by American Indian communities. ...
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The Navajo Nation placed a moratorium on genetic research studies in 2002, in part due to concerns about historical distrust, exploitation, limited expertise and resources, and the lack of a genetics policy. Navajo tribal leaders, scientists, and policy experts are exploring the possibility of lifting the moratorium, developing a genetic research policy, and discussing its potential health implications. This study aimed to identify the key concerns, needs, and desires of Navajo people regarding genetic research. We conducted a survey of Navajo individuals to assess knowledge of the moratorium and research, gauge interest in genetic research, and quantify appropriate genetic research topics to understand broad views and concerns. We performed descriptive statistics and tested associations between relevant categorical variables using Chi-square tests. We hypothesized that individuals with more knowledge about the moratorium and health research increased the likelihood of supporting and participating in genetic research. A total of 690 surveys from Navajo respondents were analyzed. Of these, 63% of respondents reported being unaware of the Navajo Nation’s moratorium on genetic research. There were positive associations between those who knew about the moratorium and willingness to donate biospecimens for research under certain conditions, such as community involvement, review and approval by community leaders, research on diseases affecting the community, and support for lifting the moratorium (p-values < 0.001). We found no significant differences between age, gender, religious/spiritual beliefs, or agency affiliation with knowledge levels of genetics and related topics, participation in relation to beliefs, and donation of biospecimens. Interestingly, respondents who resided off the Navajo Nation were positively associated with having knowledge of the moratorium, having heard of discussions of genetics on the Navajo Nation, and the lawsuit filed by the Havasupai Tribe. Most respondents agreed that it was very important to develop a policy that incorporates cultural knowledge (56%), is beneficial (56%), and has data sharing protections (59%) before allowing genetic research on the Navajo Nation. Overall, a large proportion of respondents (46%) were unsure about lifting the moratorium and instead wanted more genetics education to assess its potential implications. The study results can inform the direction of future guidelines and policies.
... For American Indian/Alaska Native communities, the data deficit is partially due to the mistrust from research misconduct 83,84 . However, prioritizing the communities' needs and incorporating tribal governance in the research process have led to recent successful research collaborations 12 . ...
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Precision medicine promises significant health benefits but faces challenges such as the need for complex data management and analytics, interdisciplinary collaboration, and education of researchers, healthcare professionals, and participants. Addressing these needs requires the integration of computational experts, engineers, designers, and healthcare professionals to develop user-friendly systems and shared terminologies. The widespread adoption of large language models (LLMs) like GPT-4 and Claude 3 highlights the importance of making complex data accessible to non-specialists. The Stanford Data Ocean (SDO) strives to mitigate these challenges through a scalable, cloud-based platform that supports data management for various data types, advanced research, and personalized learning in precision medicine. SDO provides AI tutors and AI-powered data visualization tools to enhance educational and research outcomes and make data analysis accessible for users from diverse educational backgrounds. By extending engagement and cutting-edge research capabilities globally, SDO particularly benefits economically disadvantaged and historically marginalized communities, fostering interdisciplinary biomedical research and bridging the gap between education and practical application in the biomedical field.
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... The role of the university research partner is significant, especially when considering the American Indian population. American Indians have suffered a long history of research misconduct (Chadwick et al., 2019), and this experience can contribute to community members' hesitation to engage with researchers. Thus, it may be helpful for researchers to consider supporting roles, such as involvement in manuscript development, to address health disparities and build trust among the tribal community when possible. ...
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... Wide representation of genomic, environmental, sociocultural, ethnic, and ancestral diversity in genetic/genomic research supports discovery of important insights that could directly impact the development of health interventions (e.g., biomarkers, treatments) and health outcomes (Popejoy 2019a(Popejoy , 2019bWojcik et al. 2019). DNAbased research in underrepresented populations, however, has often resulted in research misconduct (Chadwick et al. 2019;Claw et al. 2018;Garrison 2013), promotion of discriminatory theories and actions (Chaturvedi 2001;Roberts 2011;Wensley and King 2008), and exaggerated benefit (Montoya 2011;Sankar 2006). Around the world, DNA-based research overwhelmingly reflects populations with predominantly European ancestry, and other groups including Latinx 1 significantly underrepresented (Mills and Rahal 2019). ...
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Latinx populations are underrepresented in DNA-based research, and risk not benefiting from research if underrepresentation continues. Latinx populations are heterogenous; reflect complex social, migration, and colonial histories; and form strong global diasporas. We conducted a global study using a survey tool (Amazon’s Mechanical Turk portal) to ascertain willingness to participate in genetic research by Latin America birth-residency concordance. Participants in the global study identified as Latinx (n=250) were classified as the following: (1) born/live outside of Latin America and the Caribbean (LAC), (2) born within/live outside LAC, and (3) born/live within LAC. Latinx were similarly likely to indicated they would participate DNA-based research as their non-Latinx counterparts (52.8% vs. 56.2%, respectively). Latinx born and living in LAC were significantly more willing to participate in DNA-based research than Latinx born and living outside of LAC (OR: 2.5; 95% CI: 1.3, 4.9, p<.01). Latinx indicating they would participate in genetic research were more likely to trust researchers (<.05), believe genetic research could lead to better understanding of disease (<.05), and that genetic research could lead to new treatments (p<.05) when compared with Latinx not interested in participating in genetic research. In summary, significant variation exists in genetic research interest among Latinx based on where they were born and live, suggesting that this context itself independently influences decisions about participation. Cultivating and investing in a research ecosystem that addresses, values, and respects Latinx priorities, circumstances, and researchers would likely increase research participation and, even more importantly, potentially impact the inequitable health disparities disproportionately represented in Latinx communities.
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For the genomics community, allele frequencies within defined groups (or “strata”) are useful across multiple research and clinical contexts. Benefits include allowing researchers to identify populations for replication or “look up” studies, enabling researchers to compare population-specific frequencies to validate findings, and facilitating assessment of variant pathogenicity in clinical contexts. However, there are potential concerns with stratified allele frequencies. These include potential re-identification (determining whether or not an individual participated in a given research study based on allele frequencies and individual-level genetic data), harm from associating stigmatizing variants with specific groups, potential reification of race as a biological rather than a socio-political category, and whether presenting stratified frequencies—and the downstream applications that this presentation enables—is consistent with participants’ informed consents. The NHLBI Trans-Omics for Precision Medicine (TOPMed) program considered the scientific and social implications of different approaches for adding stratified frequencies to the TOPMed BRAVO (Browse All Variants Online) variant server. We recommend a novel approach of presenting ancestry-specific allele frequencies using a statistical method based upon local genetic ancestry inference. Notably, this approach does not require grouping individuals by either predominant global ancestry or race/ethnicity and, therefore, mitigates re-identification and other concerns as the mixture distribution of ancestral allele frequencies varies across the genome. Here we describe our considerations and approach, which can assist other genomics research programs facing similar issues of how to define and present stratified frequencies in publicly available variant databases.
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The underrepresentation of non-European ancestry groups in current genomic databases complicates interpretation of their genetic test results, yielding a much higher prevalence of variants of uncertain significance (VUSs). Such VUS findings can frustrate the goals of genetic testing, create anxiety in patients, and lead to unnecessary medical interventions. Approaches to addressing underrepresentation of people with genetic ancestries other than European are being undertaken by broad-based recruitment efforts. However, some underrepresented groups have concerns that might preclude participation in such efforts. We describe here two initiatives aimed at meeting the needs of underrepresented ancestry groups in genomic datasets. The two communities, the Sephardi Jewish community in New York and First Peoples of Canada, have very different concerns about contributing to genomic research and datasets. Sephardi concerns focus on the possible negative effects of genetic findings on the marriage prospects of family members. Canadian Indigenous populations seek control over the research uses to which their genetic data would be put. Both cases involve targeted efforts to respond to the groups’ concerns; these efforts include governance models aimed at ensuring that the data are used primarily to inform clinical test analyses and at achieving successful engagement and participation of community members. We suggest that these initiatives could provide models for other ancestral groups seeking to improve the accuracy and utility of clinical genetic testing while respecting the underlying preferences and values of community members with regard to the use of their genetic data.
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The completion of the Human Genome Project (HGP) in 2001 opened the floodgates to a deeper understanding of medicine. There are dozens of HGP-like projects which involve from a few tens to several million genomes currently in progress, which vary from having specialised goals or a more general approach. However, data generation, storage, management and analysis in public and private cloud computing platforms have raised concerns about privacy and security. The knowledge gained from further research has changed the field of genomics and is now slowly permeating into clinical medicine. The new precision (personalised) medicine, where genome sequencing and data analysis are essential components allows tailored diagnosis and treatment according to the information from the patient’s own genome and specific environmental factors. P4 (predictive, preventive, personalised and participatory) medicine is introducing new concepts, challenges and opportunities. This review summarises current sequencing technologies, concentrates on on-going human genomics projects, and provides some examples in which precision medicine has already demonstrated clinical impact in diagnosis and/or treatment.
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Despite the fact that numerous major public health problems have plagued American Indian communities for generations, American Indian participation in health research traditionally has been sporadic in many parts of the United States. In 2002, the University of Oklahoma Health Sciences Center (Oklahoma City, Oklahoma) and 5 Oklahoma American Indian research review boards (Oklahoma City Area Indian Health Service, Absentee Shawnee Tribe, Cherokee Nation, Chickasaw Nation, and Choctaw Nation) agreed to participate collectively in a national research trial, the Treatment Options for Type 2 Diabetes in Adolescence and Youth (TODAY) Study. During that process, numerous lessons were learned and processes developed that strengthened the partnerships and facilitated the research. Formal Memoranda of Agreement addressed issues related to community collaboration, venue, tribal authority, preferential hiring of American Indians, and indemnification. The agreements aided in uniting sovereign nations, the Indian Health Service, academics, and public health officials to conduct responsible and ethical research. For more than 10 years, this unique partnership has functioned effectively in recruiting and retaining American Indian participants, respecting cultural differences, and maintaining tribal autonomy through prereview of all study publications and local institutional review board review of all processes. The lessons learned may be of value to investigators conducting future research with American Indian communities.
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On July 12, 1974, the National Research Act (Pub. L. 93-348) was signed into law, thereby creating the National Commission for the Protection of Human Subjects of Biomedical and Behavioral Research. One of the charges to the Commission was to identify the basic ethical principles that should underlie the conduct of biomedical and behavioral research involving human subjects and to develop guidelines which should be followed to assure that such research is conducted in accordance with those principles. In carrying out the above, the Commission was directed to consider: (a) the boundaries between biomedical and behavioral research and the accepted and routine practice of medicine, (b) the role of assessment of risk-benefit criteria in the determination of the appropriateness of research involving human subjects, (c) appropriate guidelines for the selection of human subjects for participation in such research and (d) the nature and definition of informed consent in various research settings. The Belmont Report attempts to summarize the basic ethical principles identified by the Commission in the course of its deliberations. It is the outgrowth of an intensive four-day period of discussions that were held in February 1976 at the Smithsonian Institution's Belmont Conference Center supplemented by the monthly deliberations of the Commission that were held over a period of nearly four years. It is a statement of basic ethical principles and guidelines that should assist in resolving the ethical problems that surround the conduct of research with human subjects. By publishing the Report in the Federal Register, and providing reprints upon request, the Secretary intends that it may be made readily available to scientists, members of Institutional Review Boards, and Federal employees. The two-volume Appendix, containing the lengthy reports of experts and specialists who assisted the Commission in fulfilling this part of its charge, is available as DHEW Publication No. (OS) 78-0013 and No. (OS) 78-0014, for sale by the Superintendent of Documents, U.S. Government Printing Office, Washington, DC 20402. Unlike most other reports of the Commission, the Belmont Report does not make specific recommendations for administrative action by the Secretary of Health, Education, and Welfare. Rather, the Commission recommended that the Belmont Report be adopted in its entirety, as a statement of the Department's policy. The Department requests public comment on this recommendation.
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Native North American groups have rarely been included in population-based genetic studies (Need and Goldstein 2009; Reich et al. 2012).3 The tumultuous history of interactions between scientists and the indigenous peoples of the Americas has likely contributed to the dearth of genomic data on Native North American peoples. For instance, researchers who have taken blood samples in indigenous communities have often not returned to report and explain research results (Wichwar 2004). This exploitation of indigenous community members has created a mistrust of scientists (Schroeder et al. 2006) that leads many Native Americans to refuse to participate in genetic studies. Genomic scientists have reacted to indigenous mistrust by using methods that favor statistical workarounds (Wall et al. 2011) or convenience sampling rather than making the necessary effort to develop strong collaborative relationships with indigenous communities. As a result, the little genetic data that has been collected from Native American communities has not been very informative. Overall, Native Americans have opted out or have been left out of major genomic efforts to understand human genetic diversity from populations worldwide such as the International HapMap Project and the 1000 Genomes Project.
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The inherent power dynamic between academic researchers and those they study is the focus of this article. Author K. Tsianina Lomawaima analyzes the shift in the balance of power between scholars and American Indian tribes that has occurred over the last four decades. She argues that issues such as access to subjects, data ownership, analysis and interpretation, and control over dissemination of findings all reflect what amounts to a struggle for power and tribal sovereignty. Lomawaima maintains that understanding the historical relationship between Native communities and academia, as well as the relatively new research protocols developed by various tribes, is necessary for responsible and respectful scholarship.
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Importance Despite concern about an “epidemic,” there are limited data on trends in prevalence of either type 1 or type 2 diabetes across US race and ethnic groups.Objective To estimate changes in the prevalence of type 1 and type 2 diabetes in US youth, by sex, age, and race/ethnicity between 2001 and 2009.Design, Setting, and Participants Case patients were ascertained in 4 geographic areas and 1 managed health care plan. The study population was determined by the 2001 and 2009 bridged-race intercensal population estimates for geographic sites and membership counts for the health plan.Main Outcomes and Measures Prevalence (per 1000) of physician-diagnosed type 1 diabetes in youth aged 0 through 19 years and type 2 diabetes in youth aged 10 through 19 years.Results In 2001, 4958 of 3.3 million youth were diagnosed with type 1 diabetes for a prevalence of 1.48 per 1000 (95% CI, 1.44-1.52). In 2009, 6666 of 3.4 million youth were diagnosed with type 1 diabetes for a prevalence of 1.93 per 1000 (95% CI, 1.88-1.97). In 2009, the highest prevalence of type 1 diabetes was 2.55 per 1000 among white youth (95% CI, 2.48-2.62) and the lowest was 0.35 per 1000 in American Indian youth (95% CI, 0.26-0.47) and type 1 diabetes increased between 2001 and 2009 in all sex, age, and race/ethnic subgroups except for those with the lowest prevalence (age 0-4 years and American Indians). Adjusted for completeness of ascertainment, there was a 21.1% (95% CI, 15.6%-27.0%) increase in type 1 diabetes over 8 years. In 2001, 588 of 1.7 million youth were diagnosed with type 2 diabetes for a prevalence of 0.34 per 1000 (95% CI, 0.31-0.37). In 2009, 819 of 1.8 million were diagnosed with type 2 diabetes for a prevalence of 0.46 per 1000 (95% CI, 0.43-0.49). In 2009, the prevalence of type 2 diabetes was 1.20 per 1000 among American Indian youth (95% CI, 0.96-1.51); 1.06 per 1000 among black youth (95% CI, 0.93-1.22); 0.79 per 1000 among Hispanic youth (95% CI, 0.70-0.88); and 0.17 per 1000 among white youth (95% CI, 0.15-0.20). Significant increases occurred between 2001 and 2009 in both sexes, all age-groups, and in white, Hispanic, and black youth, with no significant changes for Asian Pacific Islanders and American Indians. Adjusted for completeness of ascertainment, there was a 30.5% (95% CI, 17.3%-45.1%) overall increase in type 2 diabetes.Conclusions and Relevance Between 2001 and 2009 in 5 areas of the United States, the prevalence of both type 1 and type 2 diabetes among children and adolescents increased. Further studies are required to determine the causes of these increases.