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Predicting Quality of Life Changes in Hemodialysis Patients Using Machine Learning: Generation of an Early Warning System

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Objective To predict changes in the quality of life scores of hemodialysis patients for the coming month and the development of an early warning system using machine learning Methods It was a prospective cohort study (one-month duration) at the dialysis center of a tertiary care hospital in Pakistan. The study started on 1 st October 2016. About 78 patients have been enrolled till now. Bachelor of Medicine and Bachelor of Surgery (MBBS) qualified doctors administered a proforma with demographics and the validated Urdu version of World Health Organization Quality Of Life-BREF (WHOQOL-BREF). It was to be repeated after one month to the same patient by the same investigator. Simple statistics were computed using SPSS version 24 (IBM Corp., Armonk, NY) while machine learning was performed using R (version 3.0) and Orange (version 3.1). Results Using machine learning algorithms, two models (classification tree and Naïve Bayes) were generated to predict an increase or decrease of 5% in a patient’s WHOQOL-BREF score over one month. The classification tree was selected as the most accurate model with an area under curve (AUC) of 83.3% (accuracy: 81.9%) for the prediction of 5% increase in QOL and an AUC of 76.2% (accuracy: 81.8%) for the prediction of 5% decrease in QOL over the coming month. The factors associated with an increase of QOL by 5% or more over the next month included younger age (<19 years) and higher iron sucrose doses (>278mg/month). Drops in psychological, physical, and social domain scores lead to a decrease of 5% or more in QOL scores over the following month. Conclusion An early warning system, dialysis data interpretation for algorithmic-prediction on quality of life (DIAL) was built for the early detection of deteriorating QOL scores in the hemodialysis population using machine learning algorithms. The model pointed out that working on psychological and environmental domains, in particular, may prevent the drop in QOL scores from occurring. DIAL, if implemented on a larger scale, is expected to help patients in terms of ensuring a better QOL and in reducing the financial burden in the long term.
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Received 07/30/2017
Review began 09/11/2017
Review ended 09/21/2017
Published 09/25/2017
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Predicting Quality of Life Changes in
Hemodialysis Patients Using Machine
Learning: Generation of an Early Warning
System
Shoab Saadat , Ayesha Aziz , Hira Ahmad , Hira Imtiaz , Zara S. Sohail , Alvina Kazmi ,
Sanaa Aslam , Naveen Naqvi , Sidra Saadat
1. Department of Nephrology, Shifa International Hospital, Islamabad, Pakistan 2. Medicine, Aga Khan
University Hospital, Islamabad, Pakistan 3. Medicine, Shifa International Hospital, Islamabad, Pakistan
4. Medicine, Shifa College of Medicine, Islamabad, Pakistan 5. Medicine, Amna Inyat Medical College,
Lahore, Pakistan 6. Medicine, Rawalpindi Medical College, Rawalpindi, Pakistan
Corresponding author: Shoab Saadat, dr.shoaibsaadat@gmail.com
Disclosures can be found in Additional Information at the end of the article
Abstract
Objective
To predict changes in the quality of life scores of hemodialysis patients for the coming month
and the development of an early warning system using machine learning
Methods
It was a prospective cohort study (one-month duration) at the dialysis center of a tertiary care
hospital in Pakistan. The study started on 1st October 2016. About 78 patients have been
enrolled till now. Bachelor of Medicine and Bachelor of Surgery (MBBS) qualified doctors
administered a proforma with demographics and the validated Urdu version of World Health
Organization Quality Of Life-BREF (WHOQOL-BREF). It was to be repeated after one month to
the same patient by the same investigator. Simple statistics were computed using SPSS version
24 (IBM Corp., Armonk, NY) while machine learning was performed using R (version 3.0) and
Orange (version 3.1).
Results
Using machine learning algorithms, two models (classification tree and Naïve Bayes) were
generated to predict an increase or decrease of 5% in a patient’s WHOQOL-BREF score over one
month. The classification tree was selected as the most accurate model with an area under
curve (AUC) of 83.3% (accuracy: 81.9%) for the prediction of 5% increase in QOL and an AUC of
76.2% (accuracy: 81.8%) for the prediction of 5% decrease in QOL over the coming month. The
factors associated with an increase of QOL by 5% or more over the next month included younger
age (<19 years) and higher iron sucrose doses (>278mg/month). Drops in psychological,
physical, and social domain scores lead to a decrease of 5% or more in QOL scores over the
following month.
Conclusion
An early warning system, dialysis data interpretation for algorithmic-prediction on quality of
life (DIAL) was built for the early detection of deteriorating QOL scores in the hemodialysis
population using machine learning algorithms. The model pointed out that working on
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Open Access Original
Article DOI: 10.7759/cureus.1713
How to cite this article
Saadat S, Aziz A, Ahmad H, et al. (September 25, 2017) Predicting Quality of Life Changes in
Hemodialysis Patients Using Machine Learning: Generation of an Early Warning System. Cureus 9(9):
e1713. DOI 10.7759/cureus.1713
psychological and environmental domains, in particular, may prevent the drop in QOL scores
from occurring. DIAL, if implemented on a larger scale, is expected to help patients in terms of
ensuring a better QOL and in reducing the financial burden in the long term.
Categories: Internal Medicine, Preventive Medicine, Nephrology
Keywords: machine learning, classification tree, naïve bayes, hemodialysis, prediction, quality of life
Introduction
Dialysis patients usually have a long commitment to a certain lifestyle. This, in turn, has a
significant impact on their quality of life (QOL), irrespective of the modality used [1]. Several
factors, such as environmental, social, psychological, financial, and physical, play an important
role in determining the QOL that an individual enjoys [1-3]. Several studies have been carried
out worldwide with the purpose of identifying the most significant correlates with a better QOL
[4-5]. Since there has been no study specifically aimed at the most important predictors of QOL
in order of their strength of association using modern machine learning techniques, the
purpose of this study is to produce an early warning system, dialysis data interpretation for
algorithmic-prediction on quality of life (DIAL), using machine learning to predict a change in
QOL in a hemodialysis patient over the coming month. This will be helpful in directing
resources toward the high-risk population group.
Materials And Methods
This was a prospective cohort study (of six months’ duration) at the hemodialysis unit of a
tertiary care center in Pakistan. It included all the consenting patients who are more than 15
years of age, diagnosed with end-stage renal disease (ESRD) for more than a year, have been on
a certain hemodialysis regimen (twice or thrice weekly) for at least three months, and don’t
have any disability in communication. All those who did not fulfill the inclusion criteria,
patients with a known psychological disorder, patients admitted to critical care units, and
patients who had recently (within the last three months) switched from one hemodialysis
regimen to the other were excluded from the study. Patients were included by non-probability
convenience sampling. Permission for commencement was taken from the local ethics
committee. The study started on 1st October 2016.
A total of 78 patients were enrolled. An MBBS qualified doctor administered a proforma with
demographic questions and the validated Urdu version of World Health Organization Quality of
Life-BREF (WHOQOL-BREF) by Khan MN et al. [6]. WHOQOL-BREF Urdu has already been
validated for the hemodialysis population in Pakistan; thus, it was a fitting choice for QOL
assessment. WHOQOL-BREF Urdu has 26 questions. Question one asks about an individuals’
overall perception of QOL and question two is about the overall perception of health. The
remaining questions pertain to four major domains of life, i.e., physical health, psychological
health, social relationships, and the environment. All domains have different raw score ranges;
for uniformity, all raw scores were transformed to the 4–20 range according to WHO guidelines.
Higher scores show a better QOL. Scores from all the four domains were later combined into one
final QOL score. The questionnaire was administered at the start of the study on day zero, then
repeated after one month to the same patient by the same investigator. The outcome variable
was the amount of change in the total QOL score (delta QOL) over the coming month. The
predictor variables were age, gender, income per month, iron sucrose dose per month, and total
QOL score at the beginning of the study. Other variables as predictors included changes over
the coming month for individual domain scores, hemoglobin, and serum albumin. A first
interim analysis was performed on 15th January 2017. Based on the results obtained from the
first interim analysis, the foundations of an early warning system, dialysis data interpretation
2017 Saadat et al. Cureus 9(9): e1713. DOI 10.7759/cureus.1713 2 of 10
for algorithmic-prediction of quality of life (DIAL), were also laid. DIAL’s sole purpose is to
make automated monthly data collection of QOL scores and other predictor variables. DIAL is
currently in the implementation phase and its impact on the improvement of the clinical and
financial aspects of QOL in dialysis patients will be assessed at a later date after the data is
collected. Descriptive statistics in the current study were done using SPSS version 24 (IBM
Corp., Armonk, NY). Mean and standard deviations were used to describe continuous variables
like age and QOL scores, while percentages and frequencies were used to describe categorical
variables. Machine learning was performed using R (version 3.0) and Orange (version 3.1) [7].
Results
A total of 78 patients were included in the interim analysis. The mean age in years was 51.00
(SD=20). Males comprised 53.8% (42/78) of the total population. The mean duration of
hemodialysis was 41.40 months (SD=28.90). The mean albumin levels at the start and end of
the one-month period were 3.61 g/dl (SD=0.52) and 3.63 g/dl (SD=0.53), respectively. The
means of the total QOL scores at the beginning and end of the one-month study period were
57.6 (SD=10.33) and 59.3 (SD=10.24), respectively, as seen in Table 1.
2017 Saadat et al. Cureus 9(9): e1713. DOI 10.7759/cureus.1713 3 of 10
Overall Male Female
Variables Mean SD1Mean SD Mean SD
Age (years) 51.00 20.00 54.00 19.00 47.00 22.00
Duration on hemodialysis (months) 41.40 28.90 47.50 31.30 34.30 24.50
Albumin (g/dl) - start 3.61 0.52 3.66 0.55 3.56 0.48
Albumin (g/dl) - end 3.63 0.53 3.70 0.56 3.56 0.49
Hemoglobin (g/dl) - start 10.42 1.70 10.56 1.84 10.25 1.80
Hemoglobin (g/dl) - end 10.06 1.55 10.07 1.85 10.04 1.13
Change2 in DOM1 - Physical 0.40 2.68 0.33 3.08 0.48 2.15
Change2 in DOM2 - Psychological 1.01 2.75 1.62 2.91 0.30 2.39
Change2 in DOM3 - Social -0.22 3.51 -0.16 3.89 -0.30 3.08
Change2 in DOM4 - Environmental 0.53 2.71 0.68 3.11 0.35 2.19
Change2 in QOL 1.71 7.65 2.47 8.59 0.82 6.39
Total QOL score - start 57.61 10.33 58.98 11.06 56.02 9.32
Total QOL score - end 59.32 10.24 61.44 9.05 56.84 11.11
1 Standard deviation
2 Change observed over the past month
TABLE 1: Descriptive details of variables included in the analysis
QOL: quality of life; DOM: domain
A series of student t-tests were carried out to find whether a similar difference exists among
genders, as shown in Table 2. It showed there was a significant difference in the mean scores of
psychological domains and the overall QOL score among males and females. Males had better
relative scores.
2017 Saadat et al. Cureus 9(9): e1713. DOI 10.7759/cureus.1713 4 of 10
Variables Mean Difference Sig. (2-tailed)
DOM1 - Physical -0.9 0.208
DOM2 - Psychological -1.6 0.044
DOM3 - Social -1.1 0.085
DOM4 - Environmental -1.1 0.083
Total QOL Score -4.6 0.047
Change in QOL Score -1.60 0.35
TABLE 2: Student T-test on differences in QOL domain scores among males vs
females undergoing hemodialysis
QOL: quality of life; DOM: domain
A linear regression model was then (p<0.000, r2=0.418) fit. Age, gender, income per month,
number of months on hemodialysis, and changes in values for variables like serum albumin,
potassium, calcium, phosphate, and hemoglobin were used as predictors for model
development. The overall change in total QOL score was selected to be the outcome variable.
The model showed monthly income (p<0.000) and serum albumin (p<0.000) to be positively and
significantly associated with better QOL, as shown in Table 3.
2017 Saadat et al. Cureus 9(9): e1713. DOI 10.7759/cureus.1713 5 of 10
Change in variable B1Sig.2
Income per family 4.52 <0.000
Albumin 8.14 <0.000
Age -0.08 0.153
Calcium -1.55 0.270
Months on HD -0.04 0.310
Hemoglobin 0.56 0.400
Gender 1.45 0.492
Phosphate 0.31 0.548
Potassium -0.45 0.682
(Constant) 27.35 0.029
Dependent variable: Positive change in total WHOQOL-BREF score 1 Beta coefficient 2 Level of significance (P-
value)
TABLE 3: Linear regression analysis - coefficients table
QOL: quality of life
Using machine learning algorithms (Figure 1), two models (classification tree and Naïve Bayes)
were generated to predict an increase or decrease of 5% in a patient’s WHOQOL-BREF score
over one month. The classification tree was selected as the most accurate model with an area
under curve (AUC) of 83.3% (accuracy: 81.9%) for the prediction of 5% increase in QOL and an
AUC of 76.2% (accuracy: 81.8%) for the prediction of 5% decrease in QOL over the coming
month. The factors that were associated with an increase in the QOL score by 5% over the next
month were a positive change in domain four (environmental), a total QOL score of <65 at the
beginning of the cohort study, age less than 19 years, and iron sucrose doses >278mg/month.
The factors associated with a decrease of 5% (Figure 2) in the QOL score over the following
month included a decrease in domains two (psychological), one (physical), and three (social),
and a greater than 61 total QOL score at the start of the cohort study in order of their
importance.
2017 Saadat et al. Cureus 9(9): e1713. DOI 10.7759/cureus.1713 6 of 10
FIGURE 1: Machine learning algorithm in use with confusion
matrices shown for both prediction models (increase or
decrease of 5% in QOL score)
QOL: quality of life
FIGURE 2: Classification tree: factors associated with decrease
in QOL scores by 5% or more
QOL: quality of life
Discussion
2017 Saadat et al. Cureus 9(9): e1713. DOI 10.7759/cureus.1713 7 of 10
Hemodialysis patients represent a special set of population. After hearing the diagnosis of end-
stage renal disease (ESRD), many patients undergo some level of depression [8]. There are
physical, social, and psychological impacts on their life, which are reflected in their overall
QOL [9-10]. There has always been a need to identify patients at high risk of dropping QOL
scores and working on specific domains to aid recovery.
In a tertiary care center of Islamabad, using the WHOQOL-BREF Urdu questionnaire, we
collected data regarding the most significant factors that might influence QOL scores in
hemodialysis populations. Using modern machine learning methods, we succeeded in building
a prediction model that can forecast a change in QOL score in either direction, one month in
advance. There have been many studies showing the factors associated with changes in QOL
[11]. One of the earlier studies performed in the local population showed that unemployment
and psychiatric disease were independently and significantly associated with lower scores of
QOL in the dialysis population [12]. To our knowledge, this is the first instance of using modern
data analytic techniques to this problem. There is no example of generating an early warning
system like DIAL, which may be used as a monthly surveillance system, in the long run, to
assess and shortlist patients with the highest risk of having a drop in QOL scores in the coming
month. The implementation of such a system is present in other fields [13] and is found to have
significant and positive impacts on the financial and clinical aspects of patient management
[14].
We also found that domain four (environmental domain) was positively associated with better
QOL scores. This is consistent with some earlier studies as well [15]. In an earlier study, age was
also found to be significantly associated with good QOL scores [16]. This is also evident in our
study. Higher doses of iron sucrose have been given in dialysis patients to replete iron stores
[17]. In our study, higher iron replacement doses (>278 mg per month) were found to
be associated with better QOL scores. Since the maximum dose given was 800 mg per month
intravenously, we could not ascertain whether doses greater than 800 mg are associated with a
negative change in QOL scores or not. Other studies have found optimum iron replacement
doses in terms of clinical improvement in hemoglobin and, thus, indirectly improving clinical
symptoms [18].
Among the patients who suffered a negative change in QOL scores, changes in the
psychological, physical, and social domains were the most important contributors. Older
patients, but younger than 60 years of age, were more prone to a negative change in QOL scores
over the coming month. This may be because these middle-aged patients feel limited and
restricted earlier in their life due to dialysis, leading to a greater burden of psychological
problems when compared to older (>60) and younger (<30) populations. The relation of
increasing age with QOL scores has already been shown in an earlier study [16]. Our study also
showed that males had better overall QOL and psychological domain scores when compared to
females. The findings were statistically significant but unadjusted for other covariates.
There were also a few limitations in our study. It was an observational study conducted on the
local Pakistani population. Also, most of the questions asked regarding QOL were subjective
measures of one’s own perception. Since we used the validated questionnaire for our
population in their own native language, this factor is expectedly addressed to the maximum
possibility. Also, this is an interim report on the ongoing project, which is expected to be
completed at the end of 2019. Some of the candidate covariates that are not assessed in the
interim analysis but will be used in the final report include serum iron, total iron binding
capacity (TIBC), usage of any supplementary medicine/multivitamins, diet regimens, history of
receiving any psychological or physical therapies, and so on. Despite the smaller sample size
and convenience sampling, the significant values of AUC and a high accuracy suggest a very
stable and highly dependable prediction and surveillance system. This leads our team to move
on to the publication of the interim results.
2017 Saadat et al. Cureus 9(9): e1713. DOI 10.7759/cureus.1713 8 of 10
Currently, the DIAL screening/surveillance system has been implemented in our institution. We
expect to find out if DIAL helps in reducing the long-term financial burden on dialysis patients.
The use of machine learning techniques in the health sector will help doctors make smart
decisions. This is expected to help doctors in the efficient management of their patients with
more confidence.
Conclusions
In this study, we built an early warning system, referred to as DIAL, for the early detection of a
deteriorating QOL score in the hemodialysis population using machine learning algorithms.
This model was able to identify a subset of the hemodialysis population at the highest risk of
this deterioration with an AUC of 83.3%. The model also suggested working on the
psychological and environmental domains, in particular, to prevent this drop from occurring.
DIAL, if implemented on a larger scale, is expected to help patients in terms of ensuring a
better QOL and a reduction in the financial burden in the long term.
Additional Information
Disclosures
Human subjects: Consent was obtained by all participants in this study. Animal subjects:
This study did not involve animal subjects or tissue. Conf licts of interest: The authors have
declared that no conflicts of interest exist.
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... The results showed that a predictive model built with simple methods might not perform worse than those with many complicated methods. Chaudhuri et al. [34] also used a classification tree and a simple Bayes classifier to predict changes in the quality of life of dialysis patients and created an early warning system. Finally, Xiong et al. [35] discussed an important prediction model, which was built based on left ventricular mass (LVM). ...
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... Early-warning systems are tools used by health-care providers to recognize the early signs of a serious and potentially life-threatening clinical deterioration in order to initiate mitigating interventions and management [26][27][28][29][30] . ...
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Suicide is the tenth leading cause of death in the United States (US). An early-warning system (EWS) for suicide attempt could prove valuable for identifying those at risk of suicide attempts, and analyzing the contribution of repeated attempts to the risk of eventual death by suicide. In this study we sought to develop an EWS for high-risk suicide attempt patients through the development of a population-based risk stratification surveillance system. Advanced machine-learning algorithms and deep neural networks were utilized to build models with the data from electronic health records (EHRs). A final risk score was calculated for each individual and calibrated to indicate the probability of a suicide attempt in the following 1-year time period. Risk scores were subjected to individual-level analysis in order to aid in the interpretation of the results for health-care providers managing the at-risk cohorts. The 1-year suicide attempt risk model attained an area under the curve (AUC ROC) of 0.792 and 0.769 in the retrospective and prospective cohorts, respectively. The suicide attempt rate in the “very high risk” category was 60 times greater than the population baseline when tested in the prospective cohorts. Mental health disorders including depression, bipolar disorders and anxiety, along with substance abuse, impulse control disorders, clinical utilization indicators, and socioeconomic determinants were recognized as significant features associated with incident suicide attempt.
... Early warning systems (EWS) are tools used by health care providers to recognize the early signs of a serious and potentially life-threatening clinical deterioration in order to initiate mitigating interventions and management [14][15][16][17][18]. Most existing EWS tools are deployed to monitor inpatient risk commonly relying on several physiologic parameters. ...
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BACKGROUND Suicide is the 10th leading cause of death in the US. Over the past 15 years, the total suicide rate has increased 24% from 10.5 to 13.0 per 100,000 people. In Massachusetts the rate of death by suicide is three times the rate of homicide deaths. Approximately 60% of suicides die on the first attempt. Of the remaining 40% who survive the index attempt and receive emergency or hospital level of care, rates of subsequent completed suicide are exceptionally high, ranging from 2.3% to 4%. A recent study determined that risk factors for repeat suicide attempt and suicide differed, with alcohol use, younger age and cluster B personality disorders among the attempters and older age and alcohol use among the suicide completers. This data is from a small sample in Catalonia, Spain and whether it is generalizable to populations in the USA is yet to be determined. An early warning system (EWS) for suicide attempt could prove valuable for identifying those at risk of suicide attempts, and the contribution of repeated attempts to the risk of eventual death by suicide. OBJECTIVE In this study we sought to develop an early warning system (EWS) for high risk suicide attempt patients through the development of a population-based risk stratification surveillance system. Importantly, this EWS was designed to support case managers, primary care and mental health care practitioners participating in accountable care programs. The continuous use of the system in this program will help assess the ongoing EWS effectiveness. METHODS Data from individual patient electronic health records (EHRs) from the Berkshire Health System located in Pittsfield, MA. Advanced machine-learning algorithms and Deep Neural Networks were utilized in the process of feature selection and model building. A final risk score was calculated for each individual and calibrated to indicate the probability of a suicide attempt in the following one-year time period. Risk scores were subjected to individual level analysis in order to aid in the interpretation of the results for health care providers managing the at-risk cohorts. RESULTS The one-year suicide attempt risk model attained an area under the curve (AUC) of 0.792 and 0.769 in the retrospective and prospective cohorts, respectively. The suicide attempt rate in the “very high risk” category was 60 times greater than the population baseline when tested in the prospective cohorts, 10 times greater in the “high risk” group, and 5 times greater in the “medium risk” bin. Mental health disorders including depression, bipolar disorders and anxiety, along with substance abuse, impulse control disorders, clinical utilization indicators, and socio-economic determinants were recognized as significant features associated with incident suicide attempt. CONCLUSIONS Utilizing a single EHR dataset, an EWS for the determination of risk for suicide attempt was successfully developed and prospectively validated using deep learning modeling techniques.
... In continuous ambulatory peritoneal dialysis for monitoring patients with severe kidney failure, ML has been used as the basis for an MDSS for blood test analysis to ascertain their stroke risk levels [26]. A completely different use of ML is the application of classification trees and naïve Bayes to the prediction of the quality of life in HD patients [27]. Data feature selection can help the interpretation of a given problem by providing guidance about the relative impact of input features on the outcome. ...
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Current dialysis devices are not able to react when unexpected changes occur during dialysis treatment or to learn about experience for therapy personalization. Furthermore, great efforts are dedicated to develop miniaturized artificial kidneys to achieve a continuous and personalized dialysis therapy, in order to improve the patient’s quality of life. These innovative dialysis devices will require a real-time monitoring of equipment alarms, dialysis parameters, and patient-related data to ensure patient safety and to allow instantaneous changes of the dialysis prescription for the assessment of their adequacy. The analysis and evaluation of the resulting large-scale data sets enters the realm of “big data” and will require real-time predictive models. These may come from the fields of machine learning and computational intelligence, both included in artificial intelligence, a branch of engineering involved with the creation of devices that simulate intelligent behavior. The incorporation of artificial intelligence should provide a fully new approach to data analysis, enabling future advances in personalized dialysis therapies. With the purpose to learn about the present and potential future impact on medicine from experts in artificial intelligence and machine learning, a scientific meeting was organized in the Hospital Universitari Bellvitge (L’Hospitalet, Barcelona). As an outcome of that meeting, the aim of this review is to investigate artificial intelligence experiences on dialysis, with a focus on potential barriers, challenges, and prospects for future applications of these technologies. Summary and Key Messages: Artificial intelligence research on dialysis is still in an early stage, and the main challenge relies on interpretability and/or comprehensibility of data models when applied to decision making. Artificial neural networks and medical decision support systems have been used to make predictions about anemia, total body water, or intradialysis hypotension and are promis
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Early prediction of clinical deterioration such as adverse events (AEs), improves patient safety. National Early Warning Score (NEWS) is widely used to predict AEs based on the aggregation of 6 physiological parameters. We took the same parameters as the features for AE prediction using deep learning algorithms (AEP-DLA) among hospitalized adult patients. The aim of this study is to get better performance than traditional naïve mathematical calculations by introducing novel vital sign data preprocessing schemes. We retrospectively collected the data from our electronic medical record data warehouse (2007 ~ 2017). AE rate of all 99,861 admissions was 6.2%. The dataset was divided into training and testing datasets from 2007–2015 and 2016–2017 respectively. In real-life clinical care, physiological parameters were not recorded every hour and missed frequently, for example, Glasgow Coma Scale (GCS). The expert domain suggested that missed GCS was rated as 15. We took two strategies (stack series records and align by hour) in the data preprocessing and tripling the values of negative samples for class balancing (CB). We used the last 28 hours’ serial data to predict AEs 3 hours later with Random Forest, XGBoost, Convolutional Neural Network (CNN) and Recurrent Neural Network (RNN). It is shown that CNN with CB and align by hour got the best results comparing to the other methods. The precision, recall and area under curve were 0.841, 0.928 and 0.995 respectively. The performance of the model is also better than those proposed in the published literatures.
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Background The increasing prevalence of treated end-stage renal disease and low transplant rates in Africa leads to longer durations on dialysis. Dialysis should not only be aimed at prolonging lives but also improve quality of life (QOL). Using mixed methods, we investigated the QOL of patients on chronic haemodialysis (HD) and peritoneal dialysis (PD). Methods We conducted a cross-sectional study at Tygerberg Hospital in Cape Town, South Africa. All the PD patients were being treated with continuous ambulatory peritoneal dialysis. The KDQOL-SF 1.3 questionnaire was used for the quantitative phase of the study. Thereafter, focus-group interviews were conducted by an experienced facilitator in groups of HD and PD patients. Electronic recordings were transcribed verbatim and analysed manually to identify emerging themes. Results A total of 106 patients completed questionnaires and 36 of them participated in the focus group interviews. There was no difference between PD and HD patients in the overall KDQOL-SF scores. PD patients scored lower with regard to symptoms (P = 0.005), energy/fatigue (P = 0.025) and sleep (P = 0.023) but scored higher for work status (P = 0.005) and dialysis staff encouragement (P = 0.019) than those on HD. Symptoms and complications were verbalised more in the PD patients, with fear of peritonitis keeping some housebound. PD patients were more limited by their treatment modality which impacted on body image, sexual function and social interaction but there were less dietary and occupational limitations. Patients on each modality acknowledged the support received from family and dialysis staff but highlighted the lack of support from government. PD patients had little opportunity for interaction with one another and therefore enjoyed less support from fellow patients. Conclusions PD patients experienced a heavier symptom burden and greater limitations related to their dialysis modality, especially with regards to social functioning. The mixed-methods approach helped to identify several issues affecting quality of life which are amenable to intervention.
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The mlr package provides a generic, object- oriented, and extensible framework for classification, regression, survival analysis and clustering for the R language. It provides a unified interface to more than 160 basic learners and includes meta-algorithms and model selection techniques to improve and extend the functionality of basic learners with, e.g., hyperparameter tuning, feature selection, and ensemble construction. Parallel high-performance computing is natively supported. The package targets practitioners who want to quickly apply machine learning algorithms, as well as researchers who want to implement, benchmark, and compare their new methods in a structured environment.
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Objective: The objective of the study was to determine the demographic factors affecting Quality Of Life (QOL) of hemodialysis (HD) patients. Methods: This observational study was conducted at Shalamar Hospital, Lahore. Patients of End Stage Renal Disease (ESRD) and on maintenance HD for more than three months were included during the period March to June 2012. Patient of ESRD not on dialysis and Acute Renal Failure were excluded. One hundred and twenty five patients who fulfilled the criteria were included. Demographic data containing age, sex, residence, socio economic status, education, mode of traveling for dialysis, total time consumed in dialysis were collected by the investigators. QOL index was measured using 26 items, WHO QOL BREF. Results: There were 89(71.2%) male and 36(28.8%) female patients. Environmental domain score was highest (p=0.000) than all other domains in HD Patients. In overall analysis age, marital status and total time consumed in getting HD effect QOL significantly (p=<0.05). In domain wise analysis, male has better QOL in social relationship domain than female. Age has negative relationship with physical health and psychological health domain. QOL of unmarried and literate patients is significantly better (p=<0.05) in physical health domain. Employed patients have better QOL in physical, psychological and social relationship domain (p=<0.05) than unemployed patients. Patients of residence of rural areas have better QOL in physical and environment domain. Financial status of HD patients affect QOL in social domain. Distance covered to reach hospital effect QOL in psychological domain (p=<0.05). Patients traveling in private transport have better QOL in environmental domain (p=<0.05). Total time consumed in getting HD effect social relation in QOL (p=<0.05). According to linear regression model, marital status is positive predictor and unemployment is negative predictor of QOL in physical health domain. Age is negative predictor of QOL in psychological domain, monthly income is positive predictor of QOL in domain. Unemployment is positive predictor of QOL in social relation domain. Monthly income and place of residence is positive predictor of QOL in environment domain. Conclusion: Gender, age, marital status, unemployment, residence of rural area, economical status, distance covered to reach hospital, mode of transport, total time consumed in getting HD, effect QOL in HD patient. Education level is a positive factor for improving QOL of HD patients.
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To compare the influence of demographic and clinical variables on quality of life (QOL) amongst haemodialysis (HD) and renal transplantation clients in Nepal. Renal replacement therapy in the form of renal transplant is a newer modality in Nepal. In this study, effectiveness of renal transplant and maintenance HD in clients with end-stage renal disease were evaluated in a Nepalese context. A descriptive, cross-sectional study was conducted to compare the QOL of clients undergoing HD and renal transplantation in two treatment centres in Nepal. Information on QOL was collected by using the WHOQOL-BREF instrument through interviews. The clients in the transplantation groups were significantly younger, highly educated and employed. The QOL score of clients with renal transplantation was significantly higher in the physical, psychological and social relationship domains. While assessing QOL score in transplantation groups, females scored significantly higher score in the environmental domain compared with males. The QOL score in renal transplant recipients was significantly better than that of clients on HD in three of the four WHOQOL-BREF domains. The limited resources and facilities for renal transplantation and the post-transplant follow-up service in Nepal might have contributed to a poorer outcome on the environmental domain in this group.
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INTRODUCTION. Treatment modalities for end-stage renal disease affect quality of life (QOL) of the patients. This study was conducted to assess the QOL of patients on hemodialysis and compare it with caregivers of these patients. Cause of ESRD and dialysis-related factors affecting QOL were also examined. MATERIALS AND METHODS. This cross-sectional study was conducted on patient on maintenance hemodialysis for more than 3 months at 3 dialysis centers of Lahore. Fifty healthy individuals were included as controls from among the patients' caregivers. The QOL index was measured using the World Health Organization QOL questionnaire, with higher scores corresponding to better QOL of patients. RESULTS. Eighty-nine patients (71.2%) were men, 99 (79.2%) were married, 75 (60.0%) were older than 45 years, and 77 (61.6%) were on dialysis for more than 8 months. Patients on hemodialysis had a poorer QOL as compared to their caregivers in all domains except for domain 4 (environment). There was no difference in the QOL between the three dialysis centers of the study, except for domain 3 (social relationship) of the patients at Mayo Hospital (a public hospital), which was significantly better. Nondiabetic patients had a better QOL in domain 1 (physical health) as compared to diabetic patients. Duration of dialysis had a reverse correlation with the overall QOL. CONCLUSIONS. We found that QOL of hemodialysis patients was poor as compared to caregivers of the patients, especially that of diabetics. Also, duration of dialysis had a reverse correlation with QOL.
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The study examines differences regarding quality of life (QoL), mental health and illness beliefs between in-centre haemodialysis (HD) and continuous ambulatory peritoneal dialysis (CAPD/PD) patients. Differences are examined between patients who recently commenced treatment compared to patients on long term treatment. 144 End-Stage Renal Disease (ESRD) patients were recruited from three treatment units, of which 135 provided full data on the variables studied. Patients consisted of: a) 77 in-centre haemodialysis (HD) and 58 continuous ambulatory peritoneal dialysis (CAPD/PD) patients, all currently being treated by dialysis for varied length of time. Patients were compared for differences after being grouped into those who recently commenced treatment (< 4 years) and those on long term treatment (> 4 years). Next, cases were selected as to form two equivalent groups of HD and CAPD/PD patients in terms of length of treatment and sociodemographic variables. The groups consisted of: a) 41 in-centre haemodialysis (HD) and b) 48 continuous ambulatory peritoneal dialysis (CAPD/PD) patients, fitting the selection criteria of recent commencement of treatment and similar sociodemographic characteristics. Patient-reported assessments included: WHOQOL-BREF, GHQ-28 and the MHLC, which is a health locus of control inventory. Differences in mean scores were mainly observed in the HD patients with > 4 years of treatment, providing lower mean scores in the QoL domains of physical health, social relationships and environment, as well as in overall mental health. Differences in CAPD/PD groups, between those in early and those in later years of treatment, were not found to be large and significant. Concerning the analysis on equivalent groups derived from selection of cases, HD patients indicated significantly lower mean scores in the QoL domain of environment and higher scores in the GHQ-28 subscales of anxiety/insomnia and severe depression, indicating more symptoms in these areas of mental health. With regards to illness beliefs, HD patients who recently commenced treatment provided higher mean scores in the dimension of internal health locus of control, while CAPD/PD patients on long term treatment indicated higher mean scores in the dimension of chance. Regarding differences in health beliefs between equivalent groups of HD and CAPD/PD patients, HD patients focused more on the dimension of internal health locus of control. The results provide evidence that patients in HD treatment modality, particularly those with many years of treatment, were experiencing a more compromised QoL in comparison to CAPD/PD patients.
Book
Data Mining: Practical Machine Learning Tools and Techniques, Fourth Edition, offers a thorough grounding in machine learning concepts, along with practical advice on applying these tools and techniques in real-world data mining situations. This highly anticipated fourth edition of the most acclaimed work on data mining and machine learning teaches readers everything they need to know to get going, from preparing inputs, interpreting outputs, evaluating results, to the algorithmic methods at the heart of successful data mining approaches. Extensive updates reflect the technical changes and modernizations that have taken place in the field since the last edition, including substantial new chapters on probabilistic methods and on deep learning. Accompanying the book is a new version of the popular WEKA machine learning software from the University of Waikato. Authors Witten, Frank, Hall, and Pal include today's techniques coupled with the methods at the leading edge of contemporary research. Please visit the book companion website at http://www.cs.waikato.ac.nz/ml/weka/book.html It contains Powerpoint slides for Chapters 1-12. This is a very comprehensive teaching resource, with many PPT slides covering each chapter of the book Online Appendix on the Weka workbench; again a very comprehensive learning aid for the open source software that goes with the book Table of contents, highlighting the many new sections in the 4th edition, along with reviews of the 1st edition, errata, etc. Provides a thorough grounding in machine learning concepts, as well as practical advice on applying the tools and techniques to data mining projects Presents concrete tips and techniques for performance improvement that work by transforming the input or output in machine learning methods Includes a downloadable WEKA software toolkit, a comprehensive collection of machine learning algorithms for data mining tasks-in an easy-to-use interactive interface Includes open-access online courses that introduce practical applications of the material in the book.
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Context: Fatigue and depression are two prominent concerns in patients on in-hospital hemodialysis (IHHD) that have recently been identified as research priorities in the nephrology community. Although they are often reported to co-exist, no synthesis of the literature examining their relationship is available. Objective: To characterize the literature on the relationship between fatigue and depression in IHHD patients. Methods: A scoping review as described by Arksey and O'Malley was conducted. Seven electronic databases were searched for relevant literature using search terms pertaining to fatigue, depression and in-hospital hemodialysis. Key journals and article reference lists were also hand-searched to identify relevant literature. Articles were examined for relevance, and data were extracted to describe the nature and scope of the literature and to characterize the relationship between fatigue and depression. Findings were grouped thematically, and summarized descriptively. Results and conclusions: Current literature on this topic is dominated by cross-sectional studies, which support the existence of an association between fatigue and depression in IHHD patients in various practice settings and subpopulations. Numerous multivariable analyses have been performed which suggest the association remains after adjustment for confounding factors. However, there is generally a dearth of longitudinal or interventional literature to clarify the nature of the relationship over time. Current literature is sufficient to justify routine screening for depression in IHHD patients who present with fatigue. Future research should aim to clarify the nature of the relationship over time in IHHD patients, explore mediators and modifiers of the relationship, and investigate the effects of interventions.
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Iron deficiency is a frequent complication in chronically hemodialyzed patients because of the significant blood losses associated with this technique. Quantitating iron stores (by marrow examination or serum iron and total iron-binding capacity) on a repetitive basis has been difficult or unreliable, often resulting in failure to recognize iron deficiency superimposed on the existing anemia of chronic renal failure, or overtreating, which can lead to iron excess. Use of the serum ferritin allows easier quantitation of iron stores and, when measured serially in dialysis patients, can predict the emergence of iron deficiency. There was no correlation between serum ferritin levels and serum iron, total iron-binding capacity, or percent transferrin saturation. Iron absorption studies show that food iron absorption is physiologic, increasing when the serum ferritin is below 30 ng/ml, decreasing when more than 300 ng/ml. Treatment of iron deficiency with oral iron compounds increases serum ferritin levels and usually can maintain iron balance.
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Social support is a concept recognizing patients exist to varying degrees in networks through which they can receive and give aid, and in which they engage in interactions. Social support can be obtained from family, friends, coworkers, spiritual advisors, health care personnel, or members of one's community or neighborhood. Several studies have demonstrated that social support is associated with improved outcomes and improved survival in several chronic illnesses, including cancer and end-stage renal disease (ESRD). The mechanism by which social support exerts its salutary effects are unknown, but practical aid in achieving compliance, better access to health care, improved psychosocial and nutritional status and immune function, and decreased levels of stress may all play key roles. Few data exist regarding social support in patients with ESRD and chronic renal insufficiency, but links between social support and depressive affect and quality of life have been established. Interventions that enhance social support in ESRD patients should be evaluated.