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Synthesis and characterisation of halogenated bis(acylthiourea) derivatives and its antibacterial activities

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Abstract

A total of 12 bis(acylthiourea) derivatives with different pharmacophores have been synthesized via nucleophilic substitution reaction of benzene-1,4-dicarbonyl isothiocyanate intermediate with aromatic amine bearing halogens at the ortho, meta and para positions. The structures of the synthesised compounds were confirmed by CHN elemental analysis, FT-IR, ¹H NMR and ¹³C NMR spectroscopies. Antibacterial studies of the compounds via the Kirby Bauer disc diffusion method against Escherichia coli (E.coli) ATCC 25922 and Staphylococcus aureus (S. aureus) S48/81 demonstrated that bis(acylthiourea) N¹,N⁴-bis[(2-chlorophenyl)carbamothioyl]terephthalamide (4) and N¹,N⁴-bis[(2-bromophenyl)carbamothioyl]terephthalamide (7) bearing Cl and Br at the ortho position exhibited excellent activities against both bacteria strains compared to ampicillin standard.

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... The characterization 1a-1 h using FTIR depicted a strong absorption peak at 1490-1464 cm −1 indicating the formation of v(N=N) [3]. The v(C=O) peaks were observed at 1649-1685 cm −1 [21] while v(O-H) presence as a broad peak at 3426-3453 cm −1 [22]. The 1 H and 13 C NMR spectroscopy of 1a-1 h showed the presence of aromatic protons at 7.33-8.13 ...
... The antibacterial activity of the halogenated vanillin-azo series (1a-1 h) and halogenated vanillin-Schiff base series (2a-2 h) were carried out against S. aureus and E. coli using the turbidimetric kinetic method. However, several compounds encountered solubility restrictions and dissolution in the culture media caused the precipitation of the drug [2,21]. This occurrence has interfered with the measurement of biological activities. ...
... Additional interaction of the carbonyl and phenyl ring with the phosphates moieties on the bacteria's surface has also increased the antibacterial properties of a compound [33,34]. Besides, the presence of halogen atoms as substituents has also significantly increased the biological activity of the compounds by maintaining the non-hydrophobic interaction between halogen and the amino acid of the bacteria, [21]. It is worth mentioning that the integration of halogen substituents may result in steric hindrance of the molecule and increase its capacity to interact efficiently with the bacteria [34]. ...
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Lead compounds containing nitrogen pharmacophores from natural resources have garnered interest among researchers due to their potential for drug development. However, the extractions of the active metabolites are usually labor-intensive and time-consuming. In this study, halogenated vanillin derivatives featuring azo dyes (N=N) (1a-1 h) and Schiff base (C=N) (2a-2 h) have been synthesized via diazonium coupling and nucleophilic substitution reaction, respectively. The comparative effect of N=N and C=N moieties was evaluated for antibacterial properties against Staphylococcus aureus and Escherichia coli via disc diffusion method. Incorporating C=N (8–13 mm) into the vanillin network showed excellent inhibition against S. aureus compared to N=N (7–8 mm) and the standard ampicillin (12 mm). While the halogenated vanillin featuring N=N (7–9 mm) and C=N (7–8 mm) moieties showed excellent zone of inhibitions against E. coli compared to the parent vanillin. The in-silico screening using AutoDock Vina, showed 2c-h (inhibition zone > 10 mm) with a high binding affinity against DNA gyrase enzyme with binding energy ranging from − 7.3 to − 7.9 kcal/mol, similar to re-docking of ampicillin − 7.6 kcal/mol and co-crystalize compounds BPH651 with − 7.5 kcal/mol. This research contributes a significant milestone in drug design, especially for the development of new antibacterial drugs with outstanding properties. Graphical abstract
... [1][2][3] Thiourea is one of the promising class of compounds that possess good antibacterial, antifungal, anticancer, and other useful pharmaceutical properties. [3][4][5] The presence of N-H and C=S groups in the thiourea moieties act as active binding sites between the compounds with the protein receptor on the surface of microorganism. 1 The number of thiourea moieties in a molecular network plays a significant role in antibacterial properties. The ratio of binding sites in a compound with the surface of microorganism receptors increases as the number of thiourea moieties increases. ...
... The ratio of binding sites in a compound with the surface of microorganism receptors increases as the number of thiourea moieties increases. 6,7 We have reported on series of mono-substituted thiourea 4 , di-substituted thiourea derivatives bearing halogenated aryl groups (4a-l) 5 , bearing amino acids 8 and bearing alkyl chains 8,9 with excellent antibacterial activities against Escherichia coliform (E. coli). ...
... The spectroscopy characterization of compounds (4al) has corresponded to the reported literature. 5 General Procedure for the synthesis of 3a-l Isophthaloyl dichloride 1a (0.10 g, 0.5 mmol) in 10 mL of dry acetonitrile was added into a stirring suspension of potassium thiocyanate, KSCN (0.10 g, 1.0 mmol) in 10 mL of dry acetonitrile. The mixture was stirred for 1 hour at room temperature to form intermediate 2a. ...
... Disc diffusion assay was performed on honey in the culture medium of Staphylococcus aureus (S. aureus, N5923) 17 and E. coli (ATCC 25922) 18 with some modification. 19 These bacteria were used in Mueller-Hinton broth as inoculum and incubated overnight at 37 ° C with constant shaking at 200 rpm. The suspension bacteria (100 μL of target strain) were inoculated on a Mueller-Hinton agar plate and spread thinly with a sterile cotton-tipped swab. ...
... 40 Alternatively, the antibacterial activity of honey was demonstrated against S. aureus and E. coli, via the Kir-by-Bauer disc diffusion assay. [17][18][19] The inhibition zones are presented in Figure 2. The inhibition zone of SG01 -SG03 was evaluated against E. coli (9.0-19.0 mm). ...
... 48 Samples from the same geographical source do not differ significantly in the composition that could be important chemical markers and authentication for honey. 19,20 The quality of glucose in honey is influenced by botanical sources. Another factor such as bee species is also contributing to the difference of glucose content in honey from various places. ...
... Thiourea functionality as versatile precursor derives from its ability to form stable hydrogen bonds with recognition elements of biological targets, including proteins, enzymes and receptor as the hydrogen bond network is essential for stabilizing ligandreceptor interaction (Ronchetti et al., 2021). Consequently, reactive functional groups of thiourea, such as amino, imino, and thiol, can play important roles as precursor in the synthesis of organic molecules for various biological applications, as demonstrated in bacteriostatic activities, where they can be protonated under acidic conditions and reacted with the carboxyl and phosphate groups of the bacterial surface, resulting in prominent antibacterial activity (Ngaini et al., 2012;Halim & Ngaini, 2017). Additionally, thiourea is employed as an active ingredient in pharmaceuticals, which increases the usability of their derivatives as they will pose no adverse risk to natural living bodies (Ohammad, 2018). ...
... Standard antibiotics were used as positive controls, and DMSO served as the negative control (Ngaini & Mortadza, 2019). The results were classified as mild (6-13 mm) or moderate (14-16 mm) based on the inhibition zones (Halim & Ngaini, 2017). The antibacterial activity of thiourea compounds (1-10) against gram-positive bacteria is summarized in Table 5. ...
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The rise of multidrug-resistant microbial pathogens has increased the demand for highly effective antibiotics. Five nitrobenzoylthiourea ligands (1–5) with amino acid side chains and their corresponding Cu(II) complexes (6–10) were synthesised with yields ranging from 43% to 90%. The successful synthesis of ligands 1-5 were confirmed by the absence of the ν(NCS) stretching band and the presence of the ν(NH) band, indicating the complete reaction of all (NCS) with a series of amino acids as well as the appearance of two N-H signals in the 1H NMR spectra of all the synthesised ligands. On the other hand, the shift of the (C=O) carboxylic peaks in the Cu(II) complexes suggested successful coordination of ligands to the metal ion via the carboxylate group. The antibacterial activities of these compounds were tested against six bacteria: Staphylococcus aureus, Bacillus cereus, Listeria monocytogenes, Escherichia coli, Klebsiella pneumoniae, and Pseudomonas aeruginosa using the disc diffusion method. The Cu(II) complexes (6-10) exhibited enhanced antibacterial activity compared to the ligands (1-5), especially against gram-negative bacteria (E. coli, K. pneumoniae, and P. aeruginosa). For example, compound 4 showed moderate activity against K. pneumoniae with a 14 mm inhibition zone while its Cu(II) complexes, 8 recorded better inhibition against K. pneumoniae with a 16 mm inhibition zone. Molecular docking studies on all complexes (6-10) also revealed higher binding affinity with targeted proteins with binding energy between -10.4 kcal/mol to -9.0 kcal/mol, in comparison with ligand 2 and 4 with the binding energy of only -7.7 kcal/mol (against S. aureus) and -6.9 kcal/mol (against K. pneumoniae). The enhanced antibacterial activity of all complexes correlates with the higher binding affinity obtained for all complexes. Hence, this study concludes that the nitrobenzoylthiourea derivatives, and particularly their Cu(II) complexes can show potential as antibacterial agent although more thorough investigation are required to develop these compounds into useful drugs.
... The presence of aryl/alkyl and -N=N-groups resulted in the remarkable biological properties of azo derivatives. In acidic conditions, the N=N moiety is easily protonated, which improves the biological properties of the compound (Ngaini et al. 2022;Abd Halim and Ngaini 2017). The incorporation of halogens as substituents in a molecular network has also been reported to increase biological activity which is vital for pharmaceutical usage (Mortadza et al. 2021;Ho et al. 2017). ...
... The addition of halogen as a substituent further boosted the compound's ability to enhance biological activity by stabilising the non-hydrophobic connection between the bacterium and the halogen substituent through halogen bonding with the bacteria's amino acids (Abd Halim and Ngaini 2017). However, steric repulsion of the molecule, increasing its mass and impairing its ability to interact with the bacterium, may be the source of the compound's weak antibacterial and lack of inhibitory actions (Ngaini et al. 1970). ...
Article
Chemical modification of active scaffolds from natural products has gained interest in pharmaceutical industries. Nevertheless, the metabolites extraction is time-consuming while the lead is frequently mismatched with the receptor. Here, the diazo coupling approach was introduced to generate a series of vanillin derivatives featuring halogenated azo dyes (1a-h). The vanillin derivatives showed effective inhibition of S. aureus (7-9 mm) and E. coli (7-8 mm) compared to the parent vanillin, while 1b had the highest inhibition zone (9 mm) against S. aureus comparable to the reference ampicillin. The presence of N = N, C = O, -OH, -OCH3 and halogens established strategic binding interactions with the receptor. The potential vanillin-azo as an antimicrobial drug was supported by in silico docking with penicillin-binding proteins and DFT (using Gaussian 09) with binding affinity -7.5 kcal/mol and energy gap (Egap) 3.77 eV, respectively. This study represents a significant advancement in drug discovery for effective antibiotics with excellent properties.
... A method for the formation of substituted (cycloalkylcarbonylthioureido)aryl-(benzyl-)carboxylic(sulfonic) acids (26,27) as promising plant growth regulators with fungicidal activity has been proposed [17]. The authors showed that the latter are easily formed by the sequential interaction of cyclopropanecarbonyl chloride (20), ammonium isothiocyanate and aminoaryl (benzyl-) carboxylic, sulfanilic acids or sulfamide (Fig. 8). ...
... Methods for the synthesis of bis-(arylcarbamothioyl) terephthalamides (63) with different "pharmacophore" groups have been developed according to the standard procedure, namely the nucleophilic addition reaction of halogen-substituted anilines to tere-phthaloyl diisothiocyanate (62) (Fig. 18) [27]. Studies on antibacterial activity by Kirby-Bauer disk diffusion against E. coli and S. aureus showed that N 1, N 4 -bis-[(2-chlorophenyl)-and N 1 , N 4bis-[(2-bromophenyl)-carbamothioyl]tere-phthalamide have a higher activity (growth inhibition zone 18 mm) compared to Ampicillin. ...
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Acyl isothiocyanates and their functional derivatives (acyl thioureas and acyl thiosemicarbazides) are an important group of organic compounds that are widely used in the synthesis of heterocycles and in chemistry as catalysts, ligands, colorimetric hemosensors, etc. In recent years, there has been an increased interest towards this class of compounds as promising biologically active compounds, especially since the latest advances in medicinal chemistry for them are not sufficiently studied. The aim. To summarize and systematize information for the last 10 years on methods of synthesis and biological activity of substituted acyl thioureas and acyl thiosemicarbazides. Materials and methods. Web-tools for finding scientific information (Reaxys, Scopus, Google Scholar, ScienceResearch, SciFinder, Web of Science, etc.). Results and discussion. Literature sources related to the methods of synthesis of substituted acyl thioureas and acyl thiosemicarbazides were systematized and analyzed. The main approaches for the formation of these compounds are revealed: stepwise formation from carboxylic acids, through acyl chlorides and acyl isothiocyanates followed by nucleophilic addition of amines or hydrazides of carboxylic acids ("one-pot synthesis"), nucleophilic addition of amines or hydrazides of carboxylic acids directly to acyl isothiocyanates and parallel microwave synthesis using acyl isothiocyanates and amines as reagents. The possibility of their use as ligands for the formation of complex compounds with transition metal ions was discussed. In the review biological activity of these structures, namely antimicrobial, fungicidal, antitumor, antiviral, antifungal and other activities was detailazed. Conclusions. The basic approaches to the synthesis of substituted acylthuoureas and acyl thiosemicarbazides which include the application of carboxylic acids, their derivatives (acyl halides and isothiocyanates) and N-nucleophiles as initial compounds were discussed. It was shown that aforementioned class of the compounds reveals the versatile biological activity and are promising for further structural modification aimed to the search of novel drugs
... The antibacterial mechanism of thioureaderived analogs is proposed to be about the inhibition of topoisomerase II, DNA gyrase, and topoisomerase IV (4,5,(10)(11)(12). Copper (II) complexes of 3-(trifluoromethyl)phenyl thiourea showed stronger inhibition activity towards Staphylococcus aureus DNA gyrase than the topoisomerase IV during the preliminary study (9). ...
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Background and purpose The incidence of antibiotic resistance rapidly emerges over the globe. In the present study, the synthesis of thiourea derivatives as antibacterial agents and their biological evaluation are reported. Experimental approach Preliminary studies were done by molecular docking of four analogs of 1-allyl-3-benzoylthiourea, clorobiocin, and ciprofloxacin on the DNA gyrase subunit B receptor (PDB: 1KZN). The nucleophilic substitution reaction of benzoyl chloride analogs to the allylthiourea yielded four 1-allyl-3-benzoylthiourea analogs (Cpd 1-4). The reactions were done by a modified Schotten Baumann method. The in vitro antimicrobial activities were determined using the agar dilution method against methicillin-resistant Staphylococcus aureus (MRSA), Salmonella typhi, Escherichia coli , and Pseudomonas aeruginosa. Findings/Results The in-silico study showed that Cpd 1-4 possesses a good interaction on the DNA gyrase subunit B receptor compared to the ciprofloxacin. Cpd 3 had the best binding affinity with a rerank score of - 91.2304. Although the candidate compounds showed unsatisfactory antibacterial activity, they indicated an increasing trend of growth inhibition along with the increment of concentration. Cpd 1 and 4 exhibited in vitro antibacterial activities against MRSA with a minimum inhibitory concentration value of 1000 µg/mL, better compared to the other compounds. Conclusion and implication Despite lacking antibacterial activity, all the synthesized compounds showed an increased trend of growth inhibition along with the increment of concentration. Therefore, additional development should be implemented to the compounds of interest in which optimization of lipophilicity and steric properties are suggested.
... It is known that Mycobacterium tuberculosis, the causative agent of tuberculosis, is responsible for the death of around 1.73 million people annually. The increase of resistance to multiple drugs and the little development of new specific compounds, has complicated and prolonged the treatment of tuberculosis [2,3]. ...
... iourea is known as a versatile compound that has been intensely synthesised due to its ability to undergo structural modification [4]. Having two units of reactive primary amine group has led thiourea to be a suitable precursor for the synthesis of many derivatives in new compounds [5]. Oxygen, nitrogen, and sulphur atoms of thiourea derivatives provide a multitude of bonding possibilities that may contribute to a broad spectrum of thiourea applications in the pharmaceutical field, such as antiparasitic, anticancer, antioxidant, antibacterial, antifungal, antimalarial, and anti-HIV [6][7][8]. ...
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Isomers of monothioureas, 2a – 2d , derived from the reaction of disubstituted benzoyl isothiocyanate and dibenzylamine were synthesised and characterised by using elementary analysis CHNS and IR, ¹ H NMR, and ¹³ C NMR spectroscopies. The compounds were screened for their in vitro antibacterial activity by using selected Gram-positive bacteria, and moderate inhibition activity was displayed for compound 2b with the value of inhibition zone 11 ± 0.8 mm at a concentration of 50 mg/ml. The outcomes of Lipinski’s rule of five assessment appeared to be in agreement with all compounds as they adhered to most of the rules, in which they can be preliminarily classified as active drug-like. The frontier molecular orbitals (HOMO and LUMO) for halogen-substituted 3,4-dichloro ( 2a ) and 3,4-difluoro ( 2b ) were also determined by applying the computational method of density functional theory (DFT) to determine their relationship as a molecular descriptor in antibacterial activities. The value of LUMO energy for compound 2b (1.8229 eV) is lower than that of compound 2a (1.8492 eV) which indicates higher antibacterial activities.
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Raman and IR spectra of two series of 1-furoylthiourea derivatives (19 compounds) were recorded and compared in order to identify the vibrations, which involve contributions from motions within the thioureido (NCSN) core. This procedure allowed an unequivocal identification of the nu(CS) vibration in these spectra. In 3-monosubstituted furoylthioureas (Series 2) the carbonyl group and the proton on N(3) are engaged in a strong hydrogen bond interaction. This leads to an "S"-shaped conformation of the CO and CS groups where these donor sites reach a maximum separation. In this conformation, the nu(CO) vibration is not influenced by the substituent. In the absence of that hydrogen bridge, in 3,3-disubstituted thiourea derivatives (Series 1), the CO and CS groups adopt an "U"-shaped conformation. In this conformation, the nu(CO) vibration shows a pronounced substituent dependence. These thiourea derivatives have been tested as ionophores for heavy-metal ion selective electrodes and their behavior in that sense correlates with the observed Raman and IR absorptions. The best performance in that application corresponds to compounds of Series 2, which showed the highest frequency values of the nu(CS) vibration. This fact was related to an appropriated nucleophilic character of the sulphur atom. From these data, Raman and IR spectra of these thiourea derivatives could be used as a predictor on their expected behavior in analytical applications as ionophores.
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Compound solubility in buffers and dimethyl sulfoxide (DMSO) has emerged as an important issue. Many discovery compounds have low solubility but are potentially valuable as leads. Unfortunately, low solubility affects bioassays by causing underestimated activity, reduced HTS-hit rates, variable data, inaccurate SAR, discrepancies between enzyme and cell assays and inaccurate in vitro ADME-Tox testing. Strategies for optimizing bioassays include: considering solubility in HTS-library design; early screening for solubility; improving storage and handling of DMSO stocks; optimizing dilution protocols; and ensuring that low-solubility compounds are fully solubilized in bioassays. These approaches allow for adequate assessments of valuable pharmacophores for which solubility can be chemically optimized at a later date.
Article
As a continuation of our previous efforts on N-alkyl/aryl-N'-[4-(4-alkyl/aryl-2,4-dihydro-3H-1,2,4-triazole-3-thione-5-yl)phenyl]thioureas 1-19 and N-alkyl/aryl-N'-[4-(3-aralkylthio-4-alkyl/aryl-4H-1,2,4-triazole-5-yl)phenyl]thioureas 20-22, a series of novel 5-[(4-aminophenoxy)methyl]-4-alkyl/aryl-2,4-dihydro-3H-1,2,4-triazole-3-thiones 23-26 and several related thioureas, N-alkyl/aryl-N'-{4-[(4-alkyl/aryl-5-thioxo-4,5-dihydro-1H-1,2,4-triazol-3-yl)methoxy]phenyl}thioureas 27-42 were synthesized for evaluation of their antiviral potency. Structures of the synthesized compounds were confirmed by the use of (1)H NMR, (13)C NMR and HR-MS data. All compounds 1-42 were evaluated in vitro against HIV-1 (IIIB) and HIV-2 (ROD) strains in MT-4 cells, as well as other selected viruses such as HSV-1, HSV-2, Coxsackie virus B4, Sindbis virus and Varicella-zoster virus using HeLa, Vero, HEL and E6SM cell cultures, and anti-tuberculosis activity against Mycobacterium tuberculosis H37Rv. Compounds 4 and 5 showed weak activity against HSV-1, HSV-2 and TK(-) HSV, whereas eight compounds showed marginal activity against Coxsackie virus B4. The most active derivative in this series was compound 38 which showed moderate protection against Coxsackie virus B4 with an MIC value of 16 microg/ml and a selectivity index of 5. This compound was also active against thymidine kinase positive Varicella-zoster virus (TK(+) VZV, OKA strain) with an EC(50) value of 9.9 microg/ml. Compound 38 was the most active compound with 79% inhibition against M. tuberculosis H37Rv.