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Pleurotus placentodes, originally described from Sikkim, rediscovered after 164 years

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  • Former Curator Herbarium ZT, ZUrich, Switzerland, Independent Researcher

Abstract and Figures

Although many species of Pleurotus are commonly known to be important edible mushrooms, the species delimitation of the genus is often controversial due to phenotypic plasticity and morphological stasis. In the present paper, Pleurotus placentodes, a conspicuous species originally described from Sikkim by M.J. Berkeley in 1852 and so far known only from the type collection, is documented based on specimens recently gathered in the eastern Himalayas and Hengduan Mountains, southwestern China. The morphological and molecular phylogenetic data indicate that this species is an independent taxon, and accordingly the previously proposed synonym of Pleurotus djamor is rejected. Pleurotus placentodes differs from the majority of other related species assigned to Pleurotus by the ellipsoid to subovoid basidiospores with a lower ratio of length/ width and the geographical distribution in the subalpine habitat of the Himalayan Mountains.
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Phytotaxa 267 (2): 137–145
http://www.mapress.com/j/pt/
Copyright © 2016 Magnolia Press Article PHYTOTAXA
ISSN 1179-3155 (print edition)
ISSN 1179-3163 (online edition)
Accepted by Genevieve Gates: 17 Jun. 2016; published: 4 Jul. 2016
http://dx.doi.org/10.11646/phytotaxa.267.2.6
137
Pleurotus placentodes, originally described from Sikkim, rediscovered after 164
years
XIAO-BIN LIU1,2, JING LI1,2,4, EGON HORAK3 & ZHU L. YANG1*
1 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kun-
ming 650201, Yunnan, China
2 University of Chinese Academy of Sciences, Beijing 10049, China
3 Nikodemweg 5, Innsbruck, Austria
4 Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China,
Ministry of Education, Yunnan University, Kunming 650091, Yunnan, China
*e-mail: fungi@mail.kib.ac.cn
Abstract
Although many species of Pleurotus are commonly known to be important edible mushrooms, the species delimitation of
the genus is often controversial due to phenotypic plasticity and morphological stasis. In the present paper, Pleurotus plac-
entodes, a conspicuous species originally described from Sikkim by M.J. Berkeley in 1852 and so far known only from the
type collection, is documented based on specimens recently gathered in the eastern Himalayas and Hengduan Mountains,
southwestern China. The morphological and molecular phylogenetic data indicate that this species is an independent taxon,
and accordingly the previously proposed synonym of Pleurotus djamor is rejected. Pleurotus placentodes differs from the
majority of other related species assigned to Pleurotus by the ellipsoid to subovoid basidiospores with a lower ratio of length/
width and the geographical distribution in the subalpine habitat of the Himalayan Mountains.
Key words: Agaricales, edible mushroom, Himalayas, Pleurotaceae, taxonomy
Introduction
Many species of Pleurotus (Fr.) P. Kumm. (Fries 1821: 178) Kummer (1871: 24) have great economic, dietary and
ecological importance. Therefore, numerous studies on the taxonomy of the saprobic species assigned to the genus
have been carried out (Pilát 1935; Corner 1981; Hilber 1982; Singer 1986; Vilgalys et al. 1993; Vilgalys & Sun 1994;
Segedin et al. 1995; Petersen & Krisai-Greilhuber 1996, Li & Yao 2004, 2005; Zervakis et al. 2004; Huang et al. 2010;
Li et al. 2014).
Due to phenotypic plasticity and morphological stasis, the delimitation of species in Pleurotus has often been
controversial, as there are often many synonyms under a single accepted species on one hand and also names formally
and validly published but overlooked on the other hand. Therefore, besides the morphological features, sexual
intercompatibility tests and cultural characters have been used for species delimitation (Petersen 1992, 1995; Petersen
& Hughes 1993, 1997; Vilgalys & Sun 1994). In the last twenty years, molecular phylogenetic data have also been
employed in understanding the generic limit and relationships of the species in Pleurotus (Vilgalys & Sun 1994;
Albertó et al. 2002; Moncalvo et al. 2002; Zervakis et al. 2004; Li & Yao 2004; Huang et al. 2010; Liu et al. 2015).
During the last few years, we have conducted macrofungal diversity surveys in the Eastern Himalayas and the
Hengduan Mountains, southwestern China, and collected five collections of an interesting Pleurotus. A survey of the
relevant literature and morphological examination of the materials suggested that it should be Pleurotus placentodes
(Berkeley 1852: 104) Sacc. (1887: 359), a taxon originally described from Sikkim, India, which Albertó et al. (2002)
considered to be a synonym of Pleurotus djamor (Fries 1821: 185) Boedijn (1959: 292). Our morphological observations
and molecular phylogenetic results, however, indicated that P. placentodes distinctly differs from P. djamor. In the
present paper, we characterize this half-forgotten species using both morphological and molecular evidence.
LIU ET AL.
138 Phytotaxa 267 (2) © 2016 Magnolia Press
Materials and methods
Specimens and morphological descriptions
Specimens were collected from both Tibet and Yunnan during summers 2009–2010 in subalpine forests dominated by
Betula, Abies and Picea and are deposited in the Herbarium of Cryptogams, Kunming Institute of Botany of the Chinese
Academy of Sciences, China (HKAS). The macro-morphological characters of fresh specimens were described based
on field notes and photographs. Color codes are according to Kornerup & Wanscher (1981). Microscopic observations
and interpretation of basidiospore data follow Yang (2000). Terminology for descriptive terms follows Bas (1969) and
Albertó et al. (2002). The type of Pleurotus placentodes in the herbarium of the Royal Botanic Gardens, Kew (K) was
examined by one of the authors (EH).
DNA extraction, PCR and sequencing
Genomic DNA was extracted from silica-gel dried or herbarium material using the CTAB method Doyle & Doyle
(1987). The internal transcribed spacer (ITS) region was amplified with primer pair ITS1/ITS4 White et al. (1990)
in an ABI 2720 thermal cycler (Applied Biosystems, Foster City, CA, USA). The PCR program was conducted as
follows: pre-denaturation at 94 °C for 4 min followed by 35 cycles of denaturation at 94 °C for 40 s, annealing at 50
°C for 50 s, elongation at 72 °C for 50 s; afterwards, a final elongation at 72 °C for 8 min was included. PCR products
were purified with the Gel Extraction & PCR Purification Combo Kit (Spin-column, Bioteke, Beijing, China), and
then sequenced on an ABI-3730-XL sequence analyzer (Applied Biosystems, Foster City, CA, USA) using the same
primer combinations as for the PCR. Forward and reverse sequences were assembled and edited with SeqMan (DNA
STAR package; DNAStar Inc., Madison, WI, USA). Sequences retrieved from GenBank and obtained by us in this
study are listed in Table 1.
TABLE 1. Taxa used in molecular phylogenetic analyses and their GenBank accession numbers of ITS sequences
Species Specimens or strains Location GenBank acc. #
H. auriscalpium T-082 United Kingdom EF409725
H. mastrucata T-025 Canada EF409737
P. abieticola TENN52359 Russia AY450348
P. abieticola HKAS45720 China: Tibet KP771696
P. abieticola TENN58284 Russia AF345656
P. albidus Duke327 Brazil AF345658
P. albidus BAFC 50.261 Argentina AF345659
P. australis VT1953 Australia AY315758
P. australis PDD59215 New Zealand AY315761
P. australis PDD87/021XP New Zealand AY315764
P. calyptratus CCRC 36211 - AY265814
P. calyptratus C-1 - JQ837485
P. citrinopileatus TFM-M-E793 - AB115043
P. citrinopileatus HMAS63344 China: Jilin AY696301
P. cornucopiae H-14 - JQ837484
P. cornucopiae TENN55191 Austria AY450341
P. cystidiosus AG55 USA FJ608592
P. cystidiosus IFO30607 Japan AY315778
P. cystidiosus subsp. abalonus CBS80391 China AY315806
P. cystidiosus subsp. abalonus VT2476 USA: Hawaii AY315802
...Continued on next page
PLEUROTUS PLACENTODES Phytotaxa 267 (2) © 2016 Magnolia Press 139
TABLE 1. (Continued)
Species Specimens or strains Location GenBank acc. #
P. djamor HKAS94069 Sri Lanka KX061788
P. djamor HKAS94070 Sri Lanka KX061789
P. djamor SP445789 Brazil KF280329
P. djamor IB36 Peru KJ831854
P. djamor MEL:2382775 Australia KP012957
P. djamor ECS-0176 Mexico GU722275
P. djamor MTK1189 Kenya KJ754115
P. eryngii HIK154 China: Beijing HM998841
P. eryngii HIK139 Iran: Kordestan HM998837
P. eryngii 32PL Greece FJ904755
P. cf. eryngiiC24 Iran FJ514570
P. eryngii var. tuoliensis HIK138 Iran: Esfahan HM998836
P. eryngii var. tuoliensis HIK152 China HM998839
P. eryngii var. tuoliensis CCMSSC01433 China: Beijing KP867912
P. fossulatus HIK127 Armenia HM998828
P. fossulatus ATCC 52666 India AY265833
P. nebrodensis HIK125 Italy: Apulia HM998826
P. nebrodensis UPA6 Italy: Madonie Mt. HM998816
P. nebrodensis HIK137 Iran: Kordestan HM998835
P. ostreatus TENN 53662 Austria (epitype) AY854077
P. ostreatus CCMSSC06141 China KP867915
P. ostreatus HKAS84903 Germany KP867913
P. placentodes HKAS57781 China: Yunnan KR827694
P. placentodes HKAS57145 China: Tibet (epitype) KR827693
P. placentodes HKAS94408 China: Yunnan KX061786
P. placentodes HKAS94409 China: Yunnan KX061787
P. placentodes HKAS94410 China: Tibet JQ283967
P. populinus ATCC 90083 - AY368667
P. populinus TENN56749 USA AY450346
P. pulmonarius HMAS76672 China: Heilongjiang AY696299
P. pulmonarius HKAS76382 China KP867916
P. pulmonarius ECS-0158 Mexico GU722283
P. purpureo-olivaceus PDD91632 New Zealand GQ411523
P. purpureo-olivaceus ICMP17077 New Zealand GQ411512
P. tuberregium PtWat Cameroon AF109988
P. tuberregium PTV2 Ghana AF109978
P. tuberregium Pt1 Nigeria AF109983
* Sequences KR827693, KR827694 and KX061786–KX061789 were generated in this study.
LIU ET AL.
140 Phytotaxa 267 (2) © 2016 Magnolia Press
Phylogenetic analyses
A total of 55 ITS sequences form the dataset, of which 48 were retrieved from GenBank and 7 are newly generated
sequences from this study. Hohenbuehelia auriscalpium (Maire 1930: 220) Singer (1951: 255) and H. mastrucata
(Fries 1818: 229) Singer (1951: 255) were chosen as outgroup according to the recent phylogenetic studies by Menolli
et al. (2014). The dataset was then aligned using MAFFT v7.130b Katoh & Standley (2013) and manually optimized
in Bioedit v7.0.9 Hall (1999).
Maximum Likelihood (ML) and Bayesian Inference (BI) analyses were applied using RAxML v7.2.6 Stamatakis
(2006) and MrBayes v3.1.2 Ronquist & Huelsenbeck (2003), respectively. For the phylogenetic analysis, GTR + G
was chosen as the best fit model for the dataset by using Mrmodeltest 2.3 Nylander (2004). Statistical supports were
calculated using nonparametric bootstrapping with 1000 replicates in ML analysis. For BI analysis, using selected
models and 4 chains were conducted and stopped until the standard deviation of the split frequencies fell below 0.01
and ESS values >200. Tracer v1.5 (http://tree.bio.ed.ac.uk/software/tracer/) was used to monitor the chain convergence.
Trees were sampled every 100 generations. Subsequently, trees were summarized and statistical supports were obtained
by using the sumt command complemented in MrBayes by discarding the first 25% generations as burn-ins.
FIGURE 1. Phylogenetic analysis of Pleurotus species inferred from Maximum Likelihood (ML) analysis of ITS sequences. Bootstrap
values (ML, > 50%) are shown above or beneath individual branches. Bayesian posterior probabilities (BI, > 0.90) are indicated with thick
branches. Taxonomic position of P. placentodes is emphasized in bold face.
PLEUROTUS PLACENTODES Phytotaxa 267 (2) © 2016 Magnolia Press 141
Results
Molecular phylogeny
In the alignment of the dataset, 349 characters are constant, while 294 characters are variable, of which 258 are parsimony
informative. The topology of phylogenetic trees based on the dataset generated from ML and BI analyses are almost
identical, while statistical supports show slight differences. Our results indicate that P. placentodes is related to the P.
ostreatus (Jacquin 1774: 3) Kummer (1871: 105) and P. pulmonarius (Fries 1821: 187) Quélet (1872: 113) complex,
including P. fossulatus (Cooke 1888: 121), P. eryngii var. tuoliensis (Mou et al. 1987: 153), P. ostreatus, P. populinus
(Hilber 1993: 61), P. albidus (Berkeley 1843: 633) Pegler (1983: 219), P. pulmonarius and P. abieticola (Petersen &
Hughes 1997: 175) with high statistical support (Bootstrap values 100%, and Bayesian posterior probabilities 1) (Fig.
1). Quotation marks were placed around the names in the cladogram and in the table in case the monophyly of the taxa
with the same name is questionable.
FIGURE 2. Basidiomes of Pleurotus placentodes in situ. a. HKAS 57781; b. HKAS 57145. Bars = 2 cm Photos by B. Feng and G. Wu.
LIU ET AL.
142 Phytotaxa 267 (2) © 2016 Magnolia Press
Taxonomy
Pleurotus placentodes (Berk.) Sacc., Syll. fung. (Abellini) 5: 359 (1887) Figs. 2–3
Basionym: Agaricus placentodes Berk., Hooker’s J. Bot. Kew Gard. Misc. 4: 104 (1852).
Synonym: Dendrosarcus placentodes (Berk.) Kuntze. Rev. Gen. Plant. 3: 464 (1898).
FIGURE 3. Microscopic characters of Pleurotus placentodes. a. Basidia at different stages of development and subhymenium elements
(HKAS 57781); b. Basidiospores (HKAS 57781); c. Broadly clavate to subcylindrical cheilocystidia (HKAS 57781); d. Mucronate
cheilocystidia (HKAS 94410); e. Pileipellis (HKAS 57781); f. Basidiospores (HKAS 57145); g. Mediostratum of lamellar trama (HKAS
57781). Bars 1, 3, 4, 5 and 7 = 20 µm, 2 and 6 = 10 µm. Drawings by Zhu L. Yang.
Description:—Basidiome medium-sized. Pileus flabelliform to orbiculate, occasionally obovate, 40–70 mm from
point of attachment to margin, 40–80 mm in diam.; surface pale ochre, greyish brown to brownish grey (2A2, 3B2–3),
becoming ochre to biscuit-colored (6E6–8) in dry conditions, glabrous, smooth, faintly innately streaked towards
margin, slightly viscid when wet, finely cracked when dry; margin paler colored, inrolled when young, becoming
straight at maturity; context white (1A1), unchanging, relatively thin (up to 8 mm wide near base). Lamellae decurrent,
crowded to subdistant, narrow (up to 3 mm wide), white (1A1), occasionally branched or anastomosing; lamellar edges
entire and concolorous; lamellulae 2–3 tiers. Stipe lateral, 5–10 × 5–8 mm, subcylindric, whitish to greyish (1A1, 3B3,
4B3). Odor pleasant, orange-like or indistinct; taste mild. Spore print white to cream-colored (1A1, 3A2).
Basidiospores [100/4/4] (5.5) 6–8 (9) × (3.5)4–5 µm, Q = (1.35–) 1.45–1.75 (–1.80) (Q = 1.58 ± 0.10), ellipsoid to
subovoid, sometimes elongate, colorless and hyaline, thin-walled, smooth, inamyloid, non-dextrinoid. Basidia 25–30
× 6.5–7.5 µm, narrowly clavate to clavate, thin-walled, 4-spored; sterigmata 3–4 µm long. Cheilocystidia 15–20 × 3–7
µm, not well-differentiated, clavate to broadly clavate, sometimes nearly cylindrical, occasionally mucronate, colorless
and hyaline, thin-walled. Pleurocystidia absent. Lamellar trama monomitic, composed of subregularly to irregularly
arranged thin- to thick-walled (up to 1 µm diam.), colorless and hyaline, branching, filamentous hyphae 2–8(12) µm wide;
terminal cells 50–100 µm long, non-skeletalized. Subhymenium composed of frequently branching hyphae, 3–5 µm
PLEUROTUS PLACENTODES Phytotaxa 267 (2) © 2016 Magnolia Press 143
wide. Pileipellis a 20–50 µm thick cutis composed of repent, radially arranged, yellowish to brownish, thin- to slightly
thick-walled (up to 0.5 µm diam.) filamentous hyphae, 3–6(8) µm wide; suprapileipellis slightly gelatinized, often with
coralloid to finger-like hyphal tips, 5–20 × 2–4 µm. Pileitrama monomitic, composed of radially to irregularly arranged
thin- to slightly thick-walled (up to 1 µm diam.), colorless and hyaline, filamentous hyphae, 3–15 µm wide. Stipititrama
composed of more or less irregularly arranged, frequently branching and septate, slightly thick-walled (0.5–1.5 µm
diam.), colorless and hyaline monomitic hyphae, 3–12 µm wide. Clamp connections abundant at all septa.
Habitat and known distribution:—Growing on decaying wood of Betula (reported to be the host substrate of the
type material) and Picea in subalpine forests dominated by Abies, Betula, Picea and Rhododendron; during summer
(June to September) at 3000–4200 m elev., in southwestern China. Originally described from Sikkim, India.
Specimens of Pleurotus placentodes examined: INDIA. Sikkim, on Betula wood, 3353 m elev., 1849, Hooker
f. 16 (K, holotype). CHINA. Yunnan Province, Yulong County, Shitou, 3000 m elev., 5 September 2009, G. Wu 249
(HKAS 57781); Dali City, locality unknown, Y.C. Zhao (HKAS 94408 and 94409, dried strains); Tibet Autonomous
Region, Linzhi County, Sejilashan, 4200 m elev., on Betula sp., 29 Jun. 2009, B. Feng 416 (HKAS 57145, epitype
designated here); same locality, 4100 m elev., 6 August 2010, WSX 2010806 (HKAS 94410).
Specimens of Pleurotus djamor examined: SRI LANKA. Kandy, Mt. Hanthana, 11 IX 2011, S.C. Karunarathna
SK-76 (HKAS 94069); Knuckels Range, 16 IX 2011, S.C. Karunarathna SK-83 (HKAS 94070).
Discussion
Based on the presented molecular data P. placentodes is phylogenetically basal to all other species of the P. ostreatus
- P. pulmonarius complex, including P. fossulatus, P. eryngii, P. nebrodensis, P. eryngii var. tuoliensis, P. ostreatus,
P. populinus, P. albidus, P. pulmonarius and P. abieticola (Fig. 1). The species of this complex are characterized by
monomitic basidiomes (type I of Albertó et al. 2002). It is noteworthy that the basidiospores of the genus Pleurotus are
usually cylindric to elongate, while those of P. placentodes are ellipsoid to subovoid, and therefore not “typical” for
Pleurotus. The mucronate cheilocystidia were not observed in HKAS 57145 and 57781 but were relatively common
in HKAS 94410.
Morphological characters of our collections correspond well both with the description and illustration of P.
placentodes Pegler (1977a) and the holotype material re-examined by one of the authors of the present paper (EH).
Pleurotus placentodes significantly differs from the other taxa in the aforementioned P. ostreatus - P. pulmonarius
complex by its shorter and proportionally wider basidiospores with lower Q and the occurrence in montane forests
dominated by broadleaf trees and conifers. The basidiomes from southwestern China usually possess a short stipe (Fig.
2), while the stipe is absent in the type Pegler (1997a). We treat the length of the stipe as a variable character and should
not be over-weighted.
Several names of Pleurotus, including P. placentodes, were listed as synonyms of P. djamor Albertó et al. (2002),
probably due to the variability in basidiome color and stature of species accommodated in the P. djamor complex
(Corner 1981; Pegler 1986; Nicholl & Petersen 2000). However, P. djamor is a pantropical taxon with cylindrical
basidiospores (Pegler 1977b; Corner 1981; Pegler 1986; Li et al. 2014; cf. also our observation on the collections of P.
djamor from Sri Lanka; Fig. 1), while P. placentodes with ellipsoid to subovoid basidiospores (Berkeley 1852; Pegler
1977a; also confirmed by re-examination of the holotype material) is restricted to alpine to subalpine areas in the
Himalayas at about 3000 m elev. Furthermore, P. djamor possesses a dimitic hyphal system with developing terminal
and tapering skeletal hyphae (Corner 1981; Pegler 1986; type III of Albertó et al. 2002). The results of molecular
phylogenetic analysis presented in this contribution place P. djamor and P. placentodes in two different major clades
(Fig. 1), indicating that they are not closely related.
To our knowledge, although Pegler (1977a) provided a description based on a study of the type collection, P.
placentodes was largely overlooked since its first publication by Berkeley (1852). The holotype of P. placentodes
(India, Sikkim, on Betula wood, 3353 m elev., 1849, Hooker f. 16, K) is now in very poor condition. In order to present
an updated taxonomic species concept, the recently collected specimen (HKAS 57145), is designated here as the
epitype.
Morphologically, Pleurotus placentodes is similar to the sympatric yet ill-defined species P. anserinus Sacc.
(1850: Syll. Fung. 2: 83) which is also reported by J.D. Hooker from Jillapahar, near Darjeeling, Sikkim. However,
the two species can be distinguished by the color of pilei and the shape of the basidiospores (Berkeley 1850; Pegler
1977a).
LIU ET AL.
144 Phytotaxa 267 (2) © 2016 Magnolia Press
Acknowledgements
The authors are very grateful to Mr. S.C. Karunarathna (Mae Fah Luang University), Dr. Y.C. Zhao (Yunnan Academy
of Agricultural Sciences), Dr. S.X. Wang (Beijing Academy of Agriculture and Forestry Sciences), Dr. B. Feng and Dr.
G. Wu (Kunming Institute of Botany, Chinese Academy of Sciences) for providing specimens for this study. We also
thank Dr. B. Feng and Dr. G. Wu for providing pictures of P. placentodes. The anonymous reviewers are also gratefully
acknowledged for their comments and suggestions. This study is supported by the National Basic Research Program
of China (973 Program, No. 2014CB138305).
References
Albertó, E.O., Petersen, R.H., Hughes, K.W. & Lechner, B. (2002) Miscellaneous notes on Pleurotus. Persoonia 18: 55–69.
Bas, C. (1969) Morphology and subdivision of Amanita and a monograph of its section Lepidella. Persoonia 5: 285–579.
Berkeley, M.J. (1843) Notices of some Brazilian fungi. London Journal of Botany 2: 629–643.
Berkeley, M.J. (1850) Decades of fungi, XXV to XXX. Sikkim Himalaya fungi collected by Dr. J. D. Hooker. Hooker’s Journal of Botany
and Kew Garden Miscellany 2: 76–88.
Berkeley, M.J. (1852) Decades of fungi, XXXVII, XXXVIII. Sikkim and Khassya fungi. Hooker’s Journal of Botany and Kew Garden
Miscellany 4: 97–107.
Boedijn, K.B. (1959) The fungi in Rumphius’s Herbarium Amboinense. Rumphius Memorial Volume. Hollandia, Baarn 292: 289–294.
Cooke, M.C. (1888) Some exotic fungi. Grevillea 16: 121.
Corner, E.J.H. (1981) The agaric genera Lentinus, Panus and Pleurotus with particular reference to Malaysian species. Beihefte zur Nova
Hedwigia 69:1–169.
Doyle, J.J. & Doyle, J.L. (1987) A rapid DNA isolation procedure for small quantities of fresh leaf material. Phytochemical Bulletin 19:
11–15.
Fries, E.M. (1818) Observationes mycologicae. Gerhard Bonnier, Copenhagen, 229 pp.
Fries, E.M. (1821) Systema mycologicum, sistens fungorum ordines, genera et species, huc usque cognitas, quas ad normam methodi
naturalis determinavit, volumen 1. Ex Officina Berlingiana, Lund & Greifswald, 520 pp.
http://dx.doi.org/10.5962/bhl.title.5378
Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analyses program for Windows 95/98/NT. Nucleic
Acids Symposium Series 41: 95–98.
Hilber, O. (1982) Die Gattung Pleurotus. Bibliotheca Mycologica 87: 1–448.
Hilber, O. (1993) The taxa of the genus Pleurotus - a key for determination. Mitteilungen Versuchsanstalt Pilzanbau Landw. Kammer
Rheinland 16: 57–63.
Huang, C.Y., Chen, G., Gao, S., Gao, W. & Zhang, J.X. (2010) Analysis of internal transcribed spacer regions of main species of the genus
Pleurotus. Mycosystema 29: 365–372. [in Chinese]
Jacquin, N.J. (1774) Flora Austriacae. Leopoldi Joannis Kaliwoda, Wien, 60 pp.
Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: Improvements in performance and usability.
Molecular Biology and Evolution 30: 772–780.
http://dx.doi.org/10.1093/molbev/mst010
Kummer, P. (1871) Der Führer in die Pilzkunde. C. Luppe, Zerbst, 146 pp.
Kuntze, O. (1898) Revisio generum plantarum, Volume 3. A. Felix, Leipzig, 464 pp.
Kornerup, A. & Wanscher, J.H. (1981) Taschenlexikon der Farben. 3. Aufl. Muster-Schmidt Verlag, Göttingen, 242 pp.
Li, X.L. & Yao, Y.J. (2004) Assembling phylogenetic tree of Pleurotus based on 28S rDNA sequences. Mycosystema 23: 345–350. [in
Chinese]
Li, X.L. & Yao, Y.J. (2005) Revision of the taxonomic position of the Phoenix Mushroom. Mycotaxon 91: 61–73.
Li, Y., Bau, T., Liu, Y. & Li, T.H. (2014) Flora fungorum sinicorum. Vol. 45. Pleurotoid-lentinoid fungi. Science Press, Beijing, 206 pp.
[in Chinese]
Liu, X.B., Liu, J.W. & Yang, Z.L. (2015) A new edible mushroom resource, Pleurotus abieticola, in southwestern China. Mycosystema
34: 581–588.
Maire, R. (1930) Études mycologiques (Fascicule 4). Bulletin de la Société Mycologique de France 46: 215–244.
Menolli, N., Breternitz, B.S. & Capelari, M. (2014) The genus Pleurotus in Brazil: a molecular and taxonomic overview. Mycoscience
PLEUROTUS PLACENTODES Phytotaxa 267 (2) © 2016 Magnolia Press 145
55: 378–389.
http://dx.doi.org/10.1016/j.myc.2013.12.001
Moncalvo, J-M., Vilgalys, R., Redhead, S.A., Johnson, J.E., James, T.Y., Aime, M.C., Hofstetter, V., Verduin, S.J.W., Larsson, E., Baroni,
T.J., Thorn, R.G., Jacobsson S., Clémençon, H. & Miller, O.K.Jr. (2002) One hundred and seventeen clades of euagarics. Molecular
Phylogenetics and Evolution 23: 357–400.
Mou, C.J., Cao, Y.Q. & Ma, J.L. (1987) A new variety of Pleurotus eryngii and its cultural characters. Acta Mycologica Sinica 6: 153–
156.
Nicholl, D.B.G. & Petersen, R.H. (2000) Phenetic plasticity in Pleurotus djamor. Mycotaxon 76: 17–37.
Nylander, J. (2004) MrModeltest 2.2. Computer software distributed by the University of Uppsala.
Pegler, D.N. (1977a) Pleurotus (Agaricales) in India, Nepal and Pakistan. Kew Bulletin 31: 501–510.
http://dx.doi.org/10.2307/4119394
Pegler, D.N. (1977b) A preliminary agaric flora of east Africa. Kew Bulletin Additional Series 6: 1–615.
Pegler, D.N. (1983) The genus Lentinus: a world monograph. Kew Bulletin Additional Series 10: 1–281.
Pegler, D.N. (1986) Agaric Flora of East Africa. Kew Bulletin Additional Series 12: 1–519.
Petersen, R.H. (1992) Neohaploidization and neohaplont mating as a means of identification of Pleurotus cultures. Mycosystema 5:
165–170.
Petersen, R.H. (1995) Contributions of mating studies to mushroom systematic. Canadian Journal of Botany 73: 831–642.
http://dx.doi.org/10.1139/b95-329
Petersen, R.H. & Hughes, K.W. (1993) Intercontinental interbreeding collection of Pleurotus pulmonarius with notes on P. ostreatus and
other species. Sydowia 45: 139–152.
Petersen, R.H. & Hughes, K.W. (1997) A new species of Pleurotus. Mycologia 89: 173–180.
http://dx.doi.org/10.2307/3761186
Petersen, R.H. & Krisai-Greilhuber, I. (1996) An epitype specimen for Pleurotus ostreatus. Mycological Research 100: 229–235.
http://dx.doi.org/10.1016/S0953-7562(96)80128-6
Pilát, A. (1935) Pleurotus Fries. Atlas des champignons de l’Europe 2: 1–193.
Quélet, L. (1872) Les Champignons du Jura et des Vosges. Mémoires de la Société d’Émulation de Montbéliard 5: 43–332.
Ronquist, F. & Huelsenbeck, J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572–
1574.
http://dx.doi.org/10.1093/bioinformatics/btg180
Saccardo, P.A. (1887) Sylloge Hymenomycetum, Vol. I. Agaricineae. Sylloge Fungorum 5: 1–1146.
Segedin, B.P., Buchanan, P.K. & Wilkie, J.P. (1995) Studies in the Agaricales of New Zealand 4: New species, new records and renamed
species of Pleurotus (Pleurotaceae). Australian Systematic Botany 8: 453–482.
http://dx.doi.org/10.1071/SB9950453
Singer, R. (1951) The Agaricales in modern taxonomy. Lilloa 22: 1–832.
Singer, R. (1986) The Agaricales in modern taxonomy. 4th edit. Koeltz Scientific Books, Koenigstein, 981 pp.
Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.
Bioinformatics 22: 2688–2690.
http://dx.doi.org/10.1093/bioinformatics/btl446
Vilgalys, R., Smith, A. & Sun, B.L. (1993) Intersterility groups in the Pleurotus ostreatus complex from the continental United States and
Canada. Canadian Journal of Botany 71: 113–128.
http://dx.doi.org/10.1139/b93-013
Vilgalys, R. & Sun, B.L. (1994) Ancient and recent patterns of geographic speciation in the oyster mushroom Pleurotus revealed by
phylogenetic analysis of ribosomal DNA sequences. Proceedings of the National Academy of Sciences of the United States of
America 91: 4599–4603.
White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics.
In: PCR Protocols: a guide to methods and applications. Academic Press, New York, USA, pp. 315–322.
http://dx.doi.org/10.1016/b978-0-12-372180-8.50042-1
Yang, Z.L. (2000) Type studies on agarics described by N. Patouillard (and his co-authors) from Vietnam. Mycotaxon 75: 431–476.
Zervakis, G.I., Moncalvo, J-M. & Vilgalys, R. (2004) Molecular phylogeny, biogeography and speciation of the mushroom species
Pleurotus cystidiosus and allied taxa. Microbiology 150: 715–726.
http://dx.doi.org/10.1099/mic.0.26673-0
... (Phanerochaetaceae/ Polyporales/Agaricomycetes) were downloaded from the FUNYBASE database of fungal nuclear single-copy orthologous gene sequences, and the PCR primers that amplify single-copy genes of Agaricomycetes were designed by Sato et al. (2017). To screen for PCR amplification rate, 96 markers from their study with the expected product size ranging from 280 to 450 bp were initially tested and screened against ten diverse specimens taken from different species within the P. ostreatus species complex recognized by previous studies based on morphological characteristics and molecular analyses (Bao et al. 2004;Hilber 1982;Li et al. 2017;Liu et al. 2015Liu et al. , 2016Singer 1986;Zervakis et al. 2014;Zhao et al. 2016aZhao et al. , 2016b. The amplification reactions were performed in an ABI 2720 Thermal Cycler or a SimpliAmp Thermal Cycler (Applied Biosystems, Foster City, CA, USA) with the following protocol: one cycle at 94°C for 3 min; followed by 35 cycles at 94°C for 30 s, an annealing step at 50, 52 or 54°C for 30 s, 72°C for 1 min; and a final extension step of 72°C for 7 min. ...
... Our estimation of the initial diversification of the P. ostreatus species complex was consistent with this climate change pattern (node 27; Fig. 3a; Table 3), and suggests that the global cooling may have triggered evolutionary radiations of the P. ostreatus species complex in the Northern Hemisphere. This may explain why some extant species of P. ostreatus complex, such as P. abieticola, P. ostreatus, P. placentodes, and P. pulmonarius, possess coldadapted features (Bresinsky et al. 1987;Liu et al. 2015Liu et al. , 2016Vilgalys et al. 1993). Cases of very recent radiation offer opportunities to examine the role that palaeoclimatic factors play in speciation (Du et al. 2016;Hewitt 1996Hewitt , 2000Klicka and Zink 1999). ...
... Well known as the white-rot SPF, the P. ostreatus species complex exhibits wood-decay properties that cause degradation of components of the substrate plant cell wall (PCW), including lignin, cellulose, and hemicelluloses (Sánchez 2009;Xie et al. 2016). Although belonging to the same complex, substrate specificity or preference for decayed wood is characterized by the P. ostreatus species complex taxa: most species of the P. ostreatus complex have been reported on deciduous and coniferous trees, such as Fagaceae, Betulaceae, Salicaceae and Pinaceae (Albertó et al. 2002;Liu et al. 2015Liu et al. , 2016Petersen and Hughes 1997;Petersen and Krisai-Greilhuber 1996;Vilgalys et al. 1993;Vilgalys and Sun 1994b), whereas species in Clade IIId grow in association with plant roots or stems of Apiaceae (Eryngium, Ferula, Ferulago, Cachrys, Laserpitium, Diplotaenia and Elaeoselinum) (Boisselier-Dubayle 1983; Bresinsky et al. 1987;Hilber 1982;Joly et al. 1990;Mou et al. 1987;Venturella 2000Venturella , 2002Venturella et al. 2016;Zervakis et al. 2014;Zervakis and Venturella 1998;Zhang et al. 2006;Zhao et al. 2016aZhao et al. , 2016b. Association with coniferous or deciduous logs appeared to be an ancestral character in the P. ostreatus species complex, followed by transitions to stems or roots of herbaceous Apiaceae. ...
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Abstract The Pleurotus ostreatus species complex is saprotrophic and of significant economic and ecological importance. However, species delimitation has long been problematic because of phenotypic plasticity and morphological stasis. In addition, the evolutionary history is poorly understood due to limited sampling and insufficient gene fragments employed for phylogenetic analyses. Comprehensive sampling from Asia, Europe, North and South America and Africa was used to run phylogenetic analyses of the P. ostreatus species complex based on 40 nuclear single-copy orthologous genes using maximum likelihood and Bayesian inference analyses. Here, we present a robust phylogeny of the P. ostreatus species complex, fully resolved from the deepest nodes to species level. The P. ostreatus species complex was strongly supported as monophyletic, and 20 phylogenetic species were recognized, with seven putatively new species. Data from our molecular clock analyses suggested that divergence of the genus Pleurotus probably occurred in the late Jurassic, while the most recent common ancestor of the P. ostreatus species complex diversified about 39 Ma in East Asia. Species of the P. ostreatus complex might migrate from the East Asia into North America across the North Atlantic Land Bridge or the Bering Land Bridge at different times during the late Oligocene, late Miocene and late Pliocene, and then diversified in the Old and New Worlds simultaneously through multiple dispersal and vicariance events. The dispersal from East Asia to South America in the middle Oligocene was probably achieved by a long-distance dispersal event. Intensification of aridity and climate cooling events in the late Miocene and Quaternary glacial cycling probably had a significant influence on diversification patterns of the complex. The disjunctions among East Asia, Europe, North America and Africa within Clade IIc are hypothesized to be a result of allopatric speciation. Substrate transitions to Apiaceae probably occurred no earlier than 6 Ma. Biogeographic analyses suggested that the global cooling of the late Eocene, intensification of aridity caused by rapid uplift of the QTP and retreat of the Tethys Sea in the late Miocene, climate cooling events in Quaternary glacial cycling, and substrate transitions have contributed jointly to diversification of the species complex.
... Compared with most other species of the genus Pleurotus, P. tuoliensis mainly parasitizes the roots of plants in the Umbelliferae family, which is completely different from the growth substrate of other species growing on decayed broad-leaved trees [35]. To study the host adaptability of P. tuoliensis, we selected strains parasitizing on F. ferulaeoides and F. lehmannii for selective elimination analysis and found that they were mainly significantly correlated with meiosis and the cell cycle. ...
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Pleurotus tuoliensis is a unique species discovered in Xinjiang, China, which is recognized for its significant edible, medicinal, and economic value. It has been successfully incorporated into industrial production. Controversy has emerged concerning the evolution and environmental adaptability of this species due to inadequate interspecific ecology and molecular data. This study examines the germplasm resources of P. tuoliensis in the Xinjiang region. A total of 225 wild and cultivated strains of P. tuoliensis were gathered from seven representative regions. Phylogenetic analysis revealed that seven populations were notably segregated into three distinct groups, primarily attributed to environmental factors as the underlying cause for this differentiation. Population historical size data indicate that P. tuoliensis underwent two expansion events, one between 2 and 0.9 Mya (Miocene) and the other between 15 and 4 Mya (Early Pleistocene). The ancient climate fluctuations in the Xinjiang region might have contributed to the comparatively modest population size during the Pliocene epoch. Moreover, through the integration of biogeography and ancestral state reconstruction, it was determined that group C of P. tuoliensis emerged initially and subsequently dispersed to groups D and B, in that order. Subsequently, group D underwent independent evolution, whereas group B continued to diversify into groups A and EFG. The primary factor influencing this mode of transmission route is related to the geographical conditions and prevailing wind direction of each group. Subsequent research endeavors focused on assessing the domestication adaptability of P. tuoliensis to different substrates. It was found that the metabolic processes adapted during the domestication process were mainly related to energy metabolism, DNA repair, and environmental adaptability. Processes adapted to the host adaptability include responses to the host (meiosis, cell cycle, etc.) and stress in the growth environment (cysteine and methionine metabolism, sulfur metabolism, etc.). This study analyzed the systematic evolution and genetic differentiation of P. tuoliensis in Xinjiang. The identified loci and genes provide a theoretical basis for the subsequent improvement of germplasm resources and conducting molecular breeding.
... 1). В качестве внешней группы использовали последовательности Hohenbuehelia auriscalpium (Maire) Singer (Liu et al., 2016;Li et al., 2020). ...
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Here, we present information about the findings of Pleurotus abieticola in the territory of the northeast of the European part of Russia and the western macroslope of the Northern Urals within the borders of the Komi Republic (Russia). P. abieticola is a rare species found in Europe (Czech Republic, Finland, Poland, Russia), Asia (China, Eastern Siberia, Far East, Korea) and North America (Alaska). In Russia, several locations are known in the Leningrad Region, Krasnoyarsk and Primorye Territories. Comparison of the ITS nucleotide sequences of several collected specimens of P. abieticola with the data deposited in the GenBank database showed 98.2–100% similarity with P. abieticola specimens from other parts of the range (Southern Siberia, Far East, China). The article presents a description of basidiomata, photographs of microstructures, clarified features of morpho-logy, and provides information on the distribution and ecology of this species.
... Our phylogenetic analysis revealed that PPL is more closely related to P. ostreatus, while PCY is relatively distantly related to other Pleurotus species. This is consistent with the results obtained using the ITS bar code by Liu et al. (2016). Furthermore, we predicted the differentiation time of PCY and PPL, and found that the differentiation time of these two species was 111 and 62.7 MYA, respectively. ...
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... Until 2016, researchers from Kunming Institute of Botany of the Chinese Academy of Sciences found P. placentodes in subalpine forests at an altitude of 3, [0][1][2][3][4]200 m in Xizang and Yunnan (China). This was the first report on P. placentodes in China (Liu et al., 2016). P. placentodes had a high content of proteins (30.1/100 g), crude polysaccharides (7.45/100 g), and amino acids (19.24/100 g) than of common commercially cultivated mushrooms such as Lentinula edodes, P. ostreatus, Flammulina velutipes, and Cyclocybe aegerita . ...
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Pleurotus placentodes, a fungus, belongs to the Pleurotaceae family. The aim of the present study was to characterize the structure of a novel polysaccharide from fruiting bodies of P. placentodes (PPp-W) and evaluate its anticoagulant activity in vitro. The high-performance liquid chromatography and GC–MS analysis indicated that PPp-W with a molecular weight of 27.4 kDa was mainly composed of mannose (17.56%), glucose (6.37%), galactose (44.89%), and fucose (1.22%) with a certain amount of 3-O-methyled galactose. SEM, XRD, and AFM combined with Congo red test revealed that PPp-W was an irregular curly sheet with triple-helix conformation. The FT-IR, methylation, and nuclear magnetic resonance analysis indicated that PPp-W contained→6)-α-D-Galp-(1→, →6)-3-O-Me-α-D-Galp-(1→and →2, 6)-α-D-Galp-(1→ as main chain, partially substituted at O-2 and O-6 by non-reducing ends of β-D-Manp-(1→ and β-L-Fucp-(1→ with a small amount of α-1,3-linked-Glcp in backbone. PPp-W could significantly prolong APTT (12.9 ± 0.42 s, p < 0.001) and thrombin time (39.9 ± 0.28 s, p < 0.01) compared with the control group (11.45 ± 0.071 s and 38.05 ± 0.21 s), which showed that PPp-W had anticoagulant activity. These studies suggested that PPp-W was a 3-O-methylated heteroglycan and might be suitable for functional foods and natural drugs as an anticoagulant ingredient, which provided a basis for the application of polysaccharides from P. placentodes.
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Knowledge of Pleurotus in Brazil dates back to the 19th century, when European mycologists studied and described numerous Neotropical taxa. Some of these long-described species remain poorly known, mostly due to the lack of recent records, detailed morphological descriptions, and molecular data. During field surveys in Southeast and Southern Brazil, specimens of two rare Pleurotus species with veiled basidiomata, i.e. P. magnificus and P. rickii, were collected. These species are recorded for the first time in the state of Santa Catarina, Brazil, and P. magnificus for the first time in the states of Minas Gerais, Paraná and São Paulo. Updated and detailed morphological descriptions are provided. DNA sequences of the ITS and nLSU molecular markers were obtained for both species, and phylogenetic analyses were conducted to explore their relationships within Pleurotus. A neotype is designated for P. magnificus, and a lectotype and epitype are designated for P. rickii.
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Panus is a typical wood-rotting fungi, which plays considerable roles in ecosystems and has significant economic value. The genus Panus currently consists of more than 100 species; however, only eight species have been reported from China. This study aims to distinguish and describe two novel species from the Panus similis complex, namely Panus minisporus and Panus baishanzuensis, one new record species from Zhejiang Province, Panus similis and three common species, Panus conchatus, Panus neostrigosus and Panus rudis, based on detailed morphological and phylogenetic studies, relying on Chinese specimens. Panus minisporus is characterised by its reddish-brown pileus, decurrent lamellae with cross-veins, slender stipe, smaller basidiospores, wider generative hyphae and absence of sclerocystidia. Panus baishanzuensis is featured by its pileus with concentric and darker ring zone, decurrent lamellae with cross-veins, shorter stipe, longer basidiospores, diverse and shorter cheilocystidia and smaller sclerocystidia. Internal transcribed spacer (ITS) regions, large subunit nuclear ribosomal RNA gene (nLSU) and translation elongation factor 1-α gene (tef-1α) were employed to perform a thorough phylogenetic analysis for genus Panus and related genera, using Bayesian Inference and Maximum Likelihood analysis. The results indicate that Panus minisporus and Panus baishanzuensis form two independent clades within the Panus similis complex themselves. Detailed descriptions, taxonomic notes, illustrations etc. were provided. In addition, a key to the reported species of Panus from China is also provided.
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Nấm bào ngư (Pleurotus spp.) là một trong những loại nấm ăn phổ biến trên thế giới. Tại Việt Nam, nấm bào ngư được trồng rộng rãi, đặc biệt tại phía nam. Định danh giống nấm có vai trò quan trọng trong bảo tồn và phát triển giống nấm. Phương pháp định danh cơ bản là dựa vào các đặc điểm hình thái. Bên cạnh đó việc định danh dựa trên dữ liệu các gen bảo tồn cũng đã được áp dụng rộng rãi; trong đó ITS (internal transcribed spacer) là vùng trình tự đã được sử dụng phổ biến trong định danh nấm. Nghiên cứu này được thực hiện nhằm định danh 15 chủng nấm bào ngư thu thập tại phía nam. Phương pháp định danh được sử dụng là phương pháp phân tích đặc điểm hình thái và giải trình tự vùng ITS. Kết quả phân tích cho thấy 10 chủng nấm thuộc loài P. pulmonarius và 5 chủng nấm thuộc loài P. ostreatus; kết quả định danh bằng ITS hỗ trợ tốt cho định danh bằng đặc điểm hình thái. Trên cây phát sinh loài 10 chủng nấm bào ngư xám thuộc về phân nhánh loài P. pulmonarius với chỉ số bootstrap bằng 88%; 4 chủng bào ngư trắng và chủng bào ngư tiểu yến thuộc về phân nhánh loài Pleurotus cf. floridanus (thuộc loài P. ostreatus) với chỉ số bootstrap bằng 80%. Kết quả của nghiên cứu này bổ sung thêm dữ liệu cơ bản cho các chương trình định danh, bảo tồn nguồn gen giống nấm bào ngư.
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Species of the genus Pleurotus are very important edible mushrooms and many of them can be cultivated in commercial scale. Although P. abieticola was originally described from Russian Far East, and then reported from northeastern China and northwestern Russia, its distribution range is still largely unknown. Our morphological and molecular phylogenetic evidence indicated that this species is also distributed in subalpine mountains of southwestern China. This paper documented the taxon based on morphological and ecological features, and DNA sequences generated from materials collected from Sichuan Province and the Tibet Autonomous Region
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Pleurotus djamor has become known for its variability in basidiome color and stature. To quantify the breadth of phenetic plasticity within the species, over 40 P1 collections or dikaryon cultures of putative P. djamor from Asia and America were examined. Thirty-two strains were fruited, from which 20 collections were chosen for combined analyses, including phenetic analyses for qualitative and quantitative characters and sexual compatibility tests. Two types of compatibility tests proved all selected collections were compatible, and phenetic analyses showed no significant clustering power using macro- or micromorphological characters. F1 hybrid basidiomata were produced and viable F1 basidiospores obtained. F1 hybrid basidiomata were unpredictable for color, and basidiome color intensity was reduced under "standardized" fruiting conditions. The species appeared to be pantropical, varying within acceptable infraspecific bounds except for basidiome color, which was not linked to geographic origin, other morphological characters, or light intensity during basidiome ontogeny.