... Therefore, it is difficult to find cross sections parallel to the principal direction of groundwater flow. Moreover, due to the increasingly developing computation ability, 3-D models of groundwater flow using a specified-head boundary condition at the water table are increasingly popular to understand the nature of groundwater circulation (e.g., Lazear, 2006;Marklund & Wörman, 2011;Tóth et al., 2016;Wang et al., 2016;Wang et al., 2017;Winter, 1978;Wörman, Packman, Marklund, Harvey, & Stone, 2006, 2007Zijl, 1999). Similarly, hyporheic flow induced by 3-D bed form has been examined by some researchers (e.g., Caruso, Ridolfi, & Boano, 2016;Marion, Bellinello, Guymer, & Packman, 2002;Tonina & Buffington, 2007;Marzadri, Tonina, Bellin, Vignoli, & Tubino, 2010). ...