ArticlePDF Available
UNCORRECTED PROOF
MICROSATELLITE RECORDS
1
2Microsatellite records for volume 8, issue 1
3Maria Cristina Arias Ste
´phane Aulagnier Erin F. Baerwald Robert M. R. Barclay
4Jacqueline Silva Batista Rochelle R. Beasley Rodrigo A. Bezerra
5Fre
´de
´ric Blanc Eli S. Bridge Maria Teresa Cabria
´via Izabela Caputo
6Jie Chen Jian-Hua Chen Zhi Chen Ching-Hung Chen Pengfei Chu
7Andrea Contina Fausto Moreira da Silva Carmo Leiliane Campos de Carvalho
8Priscila Maria de Freitas Viana Jeferson Luis Vasconcelos de Mace
ˆdo
9Gabriel de Menezes Yazbeck Ze
´lia de Oliveira Teixeira Nata
´lia De Souza Araujo
10 Gabriel Dequigiovanni Shaoxiong Ding Priscila Karla Ferreira Dos Santos
11 Holly B. Ernest Yan-Wei Feng Kyara Martins Formiga Christine Fournier-
12 Chambrillon Elaine Franc¸oso Yaru Fu Roderick B. Gagne Fernanda A. Gaiotto
13 Tian-xiang Gao Hongzi Ge Taiming Ge Franc¸ois Gillet Yun Gong
14 Hong-mei Gong Qiqiang Guo Liang Guo Liang Guo Ryan J. Harrigan
15 Libo He Carrie J. House Chung- Der Hsiao Rong Huang Arati Iyengar
16 Xiayun Jiang Hai-Lin Jiang Tania A. Johnson Kenneth L. Jones
17 Paulo Yoshio Kageyama Jeffrey F. Kelly Lydia Lam Stacey L. Lance
18 Hong Li Cheng Li Fugui Li Huie Li Shaoke Li Yongming Li
19 Mingming Li Mingming Li Fuhua Li Wei-guo Li Jitao Li Jian Li
20 Xinru Li Kai Liang Yaosi Liang Fuchu Liao Lanjie Liao Haoran Lin
21 Haoran Lin Haoran Lin Qiang Lin Hong Liu Honggao Liu Lu Liu
22 Xiang-Quan Liu Ping Liu Chen Liu Xin Liu Maria Teresa Gomes Lopes
23 Danqi Lu Ming-Bao Luan Wei Luo Zining Meng Zining Meng
24 Johan R. Michaux Me
´lanie Ne
´moz John P. Pollinger Ye Qiao
25 Hongyue Qu Santiago Linorio Ferreyra Ramos Stephne
´Le Roux
26 Leandro Rodrigues Santiago Xiaoyan Shao Kang-Ning Shen Heding Shen
27 Hao Shen Thomas B. Smith Dang-yu Song Eric Sourp Yiwen Sun
28 Huiyuan Tang Qing Tang Yiqin Tong Marion van den Einden
29 Moniek J. C. van Hoppe Elizabeth Ann Veasey Corinne Vial-Novella
30 Li Wan Xiaojun Wang Yiming Wang Yu Wang Yaping Wang
31 Ruoran Wang Xin Wang Rifang Wang Quanchao Wang Guo-dong Wang
32 Jiajia Wang Dongfeng Wang Peipei Wang Xiu-Mei Wei Yanfei Wen
33 Haishen Wen Xue-Ping Wu Xin Wu Jianhai Xiang Zhenzhen Xie
34 Zhanning Xu Pao Xu Zhi Yang Sen Yang Sen Yang Cece Yin
35 Shaowu Yin Shaowu Yin Yang Yu Xiping Yuan Gen Hua Yue
36 Gong-Gu Zang Rafael Zardoya Li-hui Zhang Xiaojun Zhang
37 Yong Zhang Guosong Zhang Yan- di Zhang Hongye Zhang Guosong Zhang
38 Jie Zhao Cheng Zhao Fei Zhu Hongchai Zhu Shilong Zhu Shuming Zou
39
40 Springer Science+Business Media Dordrecht 2016
41 42
A1 Electronic supplementary material The online version of this
A2 article (doi:10.1007/s12686-016-0522-2) contains supplementary
A3 material, which is available to authorized users.
A4
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
Conservation Genet Resour
DOI 10.1007/s12686-016-0522-2
UNCORRECTED PROOF
43 44
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Synechogobius hasta S-7170
a
F:GGCTTTGCGATTTATCCTCA
R:CAGTGTACACAAGGGGGCTT
(AC)6) 178–288 32 16 0.594 (0.799)
Synechogobius hasta S-9662
a
F:CACCGTCCTTTTAGATCCCA
R:TGGAACTCAGGCCATAAAGG
(AC)7 248–256 32 5 0.656 (0.733)
Synechogobius hasta S-12224
a
F:TCCTCCCTGAGATTCCTCAA
R:TACCAAAAAGATGCACTGCG
(AT)6 180–188 32 5 0.594 (0.656)
Synechogobius hasta S-12344
a
F:TGATTGAGCCTTGATTTAGCG
R:GAGGCAAAGAAAGCCAAGTC
(AC)7 282–300 32 9 0.750 (0.818)
Synechogobius hasta S-9829
a
F:GCAACATCGATAGAAAGTGCC
R:CGCATAACAAAACTGATCCAAA
(AAT)6 246–263 32 10 0.625 (0.812)
Synechogobius hasta S-12421
a
F:TTCCGCTTCACTCACACTTG
R:AGTTTTAGCGCCATCTACCG
(TG)6 256–264 32 4 0.594 (0.477)
Synechogobius hasta S-14128
a
F:CATTTTCACCCGGTTCAGTT
R:GGAGACTCTGGGTCTGAACG
(TCC)5 186–216 32 11 0.750 (0.847)
Synechogobius hasta S-8301
a
F:ATATGCTGGAGGTGCCTCTG
R:AAGGGAAATCAGGGCTTCAT
(GTG)5 254–270 32 5 0.500 (0.486)
Synechogobius hasta S-10502
a
F:TTTGAGACAAATATGGACGCA
R:CAACACAAAAAGGAATGCGA
(AAC)5 146–155 32 5 0.125 (0.120)
Synechogobius hasta S-7130
a
F:TTTCCATTTCGAAGGGTGAG
R:GGATTTCATCAAGCCTCCAA
(TG)6 112–149 32 11 0.688 (0.785)
Synechogobius hasta S-14289
a
F:CTCTTGAGTCGTGTTGGTGG
R:CCCACACTTTGTCCGTGTAA
(CT)10 255–282 32 11 0.125* (0.841)
Synechogobius hasta S-15465
a
F:CGTGACCAATGTGTTGGAAG
R:TCAAGAACCCGGAGATCAAC
(GCT)5 205–278 32 19 0.000 (0.943)
Synechogobius hasta S-16908
a
F:AAACCAAACACGTGACCACA
R:AAAGCAGGACTTGGCAGAAG
(TC)8 148–172 32 15 0.656 (0.892)
Synechogobius hasta S-3285
a
F:GGATGCAGAGAGACAGGAGG
R:TCAACGCTCTTTCCAACTCA
(GA)7 206–217 32 5 0.063 (0.179)
Synechogobius hasta S-10067
a
F:TAGACGGAGCGCTTTACCTG
R:CTTTCACCGCAGATTCCAGT
(CCG)6 108–146 32 14 0.219 (0.745)
Synechogobius hasta S-10501
a
F:CTGCTGGCTCTGCTGTAGTG
R:ATTCGCTGCTGAAAGGAGAA
(GTT)5 198–232 32 8 0.156* (0.582)
Synechogobius hasta S-13590
a
F:GGACTCTGAAAGCTTGCCTG
R:GTCACGGTCTGGGTCTGAAT
(GAA)5 194–203 32 3 0.438* (0.657)
Synechogobius hasta S-13930
a
F:GTCACGGTCTGGGTCTGAAT
R:CACTCCAATATGCATGGCAC
(ACAT)5 203–365 32 7 0.000* (0.387)
Synechogobius hasta S-9028(1)
a
F:TCACCAGACATGACACAGATCA
R:GGGATGATGGGACCCTATTT
(TAT)6 200–277 32 22 0.000 (0.952)
Synechogobius hasta S-13120
a
F:TTGTCCCTCAACATCTTCCC
R:CCCAATCCCAAAAACACAAC
(CT)10 188–232 32 15 0.406 (0.903)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
45 46
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Synechogobius hasta S-11280
a
F:GGAGGACACTGATTCCCTCA
R:TATCGACGTGCCATCACATT
(AC)6 211–268 32 9 0.250* (0.797)
Synechogobius hasta S-13267
a
F:GTGGTTGGTGAACTCCGTCT
R:AGGACGTTGGAGAGTGTTGG
(TC)8 211–266 32 10 0.219 (0.663)
Synechogobius hasta S-9028(2)
a
F:AAATAGGGTCCCATCATCCC
R:TCTTGGCACAAAATGCTCTG
(CA)7 206–232 32 13 0.938 (0.826)
Synechogobius hasta S-4092
a
F:AAGCAGCCTTTGAAGACCAA
R:TTCTTTGCCCTCTGCTTCAT
(CGA)6 282–302 32 16 0.469 (0.86)
Synechogobius hasta S-15094
a
F:TGAACATATACATGCGGCCT
R:GCAGTGTAATGTTTTGGGGG
(AC)9 212–244 32 16 0.938 (0.908)
Synechogobius hasta S-9726
a
F:GGCGTTCTTCTGGACTTCTG
R:ATCCCCTCTTCTCTTGCCAT
(AG)6 109–137 32 23 0.938 (0.937)
Synechogobius hasta S-9329
a
F:AAGCTCCACCCCGAAACTAT
R:ATTCCAGGGAAGGTTTCCAC
(ATT)5 237–288 32 15 0.250 (0.485)
Synechogobius hasta S-1553
a
F:TTCTCCTACTGCTCCCCAGA
R:ACCCAACAGTTTTGACTCGG
(AC)8 237–271 32 22 0.781 (0.898)
Synechogobius hasta S-14078
a
F:TGTTGTTTGCCTGTGGGATA
R:TCATCCAGATCTGATCCACG
(GCC)5 162–254 32 22 0.750 (0.917)
Synechogobius hasta S-1515
a
F:TCTCTGTGCCAAAACAGTCG
R:CCCCGGCTCAGTATCAGTTA
(AGG)5 274–313 32 13 0.781 (0.898)
Synechogobius hasta S-11159
a
F:AGATAGACATTTCCGCCCCT
R:GTGAGTGTGGAGAAGGCACA
(CT)9 105–130 32 21 0.781 (0.935)
Synechogobius hasta S-13449
a
F:TGTGGTCGCTCCTTTCTTCT
R:CGTCAGACTTCCGGACTTTC
(AGAA)5 229–286 32 24 0.000 (0.962)
Synechogobius hasta S-12331
a
F:TTGCCGACAATGTTGGAGTA
R:TCCACAACAACGCAGTAAGG
(TG)7 228–281 32 20 0.063 (0.950)
Synechogobius hasta S-5685
a
F:TTCGTTGTTTCCGATGTAACTG
R:TTTGTTTTGGGATCTGATTTGA
(AC)6 162–180 32 8 0.125 (0.338)
Synechogobius hasta S-15402
a
F:ACTCGTCAGGCGTTTCAGAG
R:TTCCCGTTTTTCATCTGGAG
(GAG)5 247–289 32 8 0.000* (0.720)
Synechogobius hasta S-12326
a
F:ACAGTAACAGCAGCGTCCCT
R:ATGTTTGTGCTCAGTGCAGG
(CTG)5 176–293 32 23 0.563 (0.930)
Synechogobius hasta S-1910
a
F:GTTGACGCTCCCTTTGTAGC
R:AGTTGACGTTCCACCGAAAC
(AG)8 230–281 32 22 0.281 (0.653)
Synechogobius hasta S-12897
a
F:GCTGAGAAATCAAGGAGGGA
R:ACAGAGCTGAAGAAAGCCCA
(TG)7 138–140 32 2 0.031* (0.198)
Synechogobius hasta S-17524
a
F:TTTTGCGTAGAATCACGCTG
R:GCCTGAGAAACTGCCTATGG
(AAAG)5 270–328 32 13 0.500 (0.818)
Synechogobius hasta S-7829
a
F:TTCATGCACGTAAAGCCAAA
R:GGCATTTTAGGGGAAAGAGG
(AT)6 247–325 32 17 0.250 (0.861)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
47 48
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Synechogobius hasta S-11814
a
F:TAGTATTGGCGGGCATTAGG
R:TGGACCTGAACTTGAGGGAA
(GT)6 242–263 32 20 0.750 (0.918)
Synechogobius hasta S-9043
a
F:TAGCCGTTTTGTGTCATGGA
R:GACACGTGGCCAAATAACCT
(AC)7 176–260 32 18 0.719 (0.893)
Platevindex mortoni PM1
b
F:CAACAAAGGTGGATAAAGAATGG
R: GGTCTACAGAAGGAGGGATGG
(GAAC)6 127–154 36 4 0.5278 (0.5372)
Platevindex mortoni PM5
b
F:ATCCTGGTGTTATTATTTTG
R:TTATGACTTCCACTCCCCTA
(TTAA)5 173–186 36 2 0.1667 (0.1549)
Platevindex mortoni PM6
b
F:TCCTCCTATGGAACTTCACTG
R:ATCTGCTTTGTCTGCCTCAT
(TCAA)10 171–184 36 2 0.5000 (0.5055)
Platevindex mortoni PM7
b
F:AGCGACGATAAACACTGGAA
R:CGTGCTGCTCTATGAATGAAC
(TCAG)6 294–343 36 2 0.1944 (0.2625)
Platevindex mortoni PM9
b
F:ATCTGTTGCCGTATGGTGCTG
R:TCTGGATGGGTTGGCTTTGT
(GTCA)5 162–204 36 2 0.0556 (0.0548)
Platevindex mortoni PM13
b
F:CAAACGAAACGCAGAATAAG
R:AACTGACCTGGTGTAAATGA
(AAAC)5 250–260 36 2 0.1944 (0.1780)
Platevindex mortoni PM14
b
F:TCAAAGAAAGAGCCGAGATT
R:AGGGCAGGTAACTGAACTAA
(ATT)6 285–320 36 3 0.3333 (0.2895)
Platevindex mortoni PM15
b
F:GTAACCTACCAAAGAGGACCAG
R:TCAGCACTAGCGAATCAACC
(TGT)6 131–139 36 2 0.1111 (0.1064)
Platevindex mortoni PM16
b
F:TAACATCATCTTCACCAGCATCA
R:TAACATCATCTTCACCAGCATCA
(ACC)7 565–625 36 2 0.1389 (0.1311)
Platevindex mortoni PM23
b
F:AAGCCTCCTCGGAAAGTGCC
R:CGTGAAAGTTGTTGCGGTGGTAG
(AGG)7 325–335 36 2 0.1944 (0.2218)
Platevindex mortoni PM25
b
F:ACGCAATGGGTAGGACTCGC
R:GAAGACAAGAATGGCAGCAACG
(CGA)6 246–261 36 2 0.1389 (0.1311)
Platevindex mortoni PM27
b
F:GTAAACAGCCAACAGGAGCAA
R:AACACGCCACTGGACACGAA
(TTC)6 225–325 36 3 0.0278 (0.0278)
Platevindex mortoni PM28
b
F:AACTTATCACCCTCGCCTCA
R:CAGAAAGCCAGCGTAACAGC
(TAT)6 129–150 36 4 0.2778 (0.2516)
Platevindex mortoni PM32
b
F:AGAAGCAAAGTCCTCGTTAG
R:CAGAACATCATCAAATACCG
(AAT)7 220–341 36 3 0.0556 (0.0552)
Platevindex mortoni PM41
b
F:GGGATTTCTCGCTCTTCATT
R:TTTCTGTTACTACACCCTTTG
(CT)10 279–400 36 3 0.4722 (0.3916)
Platevindex mortoni PM42
b
F:GGACCTAAGAGGCAAGAAACA
R:AGTAACCGTAAACACTCCATCAC
(GAA)6 246–300 36 2 0.0625 (0.0615)
Platevindex mortoni PM46
b
F:GTTGTTTGCTGTTATTGTTCGCTAT
R:CCTTCAGTTGTCTCCCGTCA
(TGT)6 90–110 36 5 0.8214* (0.8370)
Platevindex mortoni PM48
b
F:TGGTTCCCAGGCATTTCTCC
R:CAGTTGGTCCAGTCCATCATCC
(GTG)6 149–262 36 2 0.1250 (0.1190)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
49 50
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Platevindex mortoni PM55
b
F:GCGGCTCATTATCACAAACT
R:ATCACCTCTTCCCAACAATCT
(CAG)6 148–244 36 3 0.2813 (0.2941)
Platevindex mortoni PM56
b
F:TTTCATTTAGGGCTCCATTC
R:TTCCCAGTATTTCCTGTTCG
(AT)9 247–275 36 2 0.0313 (0.0313)
Platevindex mortoni PM57
b
F:TTCTTATCGCTATCTCACTT
R:AATGGAACAACTACAATCTG
(TC)9 200–205 36 2 0.4706 (0.5134)
Platevindex mortoni PM60
b
F:TTTTAGTATTTTCAGCAGGGGTTT
R:CAGTGGACGATTTGGGCATT
(AG)9 248–260 36 2 0.9688* (0.5074)
Onychostoma sima OS-SSR1
c
F:AGTCTACATCCAAGTAAATGCC
R:GCCAAATAACCATTATTAATTTTA
(AATG)8 128–140 40 3 0.200* (0.541)
Onychostoma sima OS-SSR2
c
F:TTCTTAATTTGTTTTATCATGAATG
R:AATAACATTTCTTTTAGATTGCTAC
(AATG)9 113–161 40 6 0.875 (0.763)
Onychostoma sima OS-SSR3
c
F:TTCCTGACATGGTTTTCTTCTC
R:CCTTGCCATTGTTGCCT
(GGT)5 123–159 40 6 0.600 (0.562)
Onychostoma sima OS-SSR4
c
F:AAAAGTGTGTGTGTGAGAGTGAG
R:CAACAGTCCCCAATGAAATG
(TGAG)7 99–123 40 6 0.650 (0.645)
Onychostoma sima OS-SSR5
c
F:GAATGTCTGAAATTATTACTTTTTA
R:TGACAGCACTAGTAAGTATGTATTC
(ACTG)9 125–149 40 8 0.553 (0.742)
Onychostoma sima OS-SSR6
c
F:ATGCACATGGAGAAAATCTATG
R:ATAGACAAACATACAGACAGATAG
(ATCT)13 105–121 40 5 0.800 (0.714)
Onychostoma sima OS-SSR7
c
F:AATAATGACATAATGATTTGATAATG
R:GGAGATAATGGTGTTCACTTTT
(AGAT)8 167–199 40 7 0.923 (0.816)
Onychostoma sima OS-SSR8
c
F:TACGATAAAGGCTGCTGTATAG
R:CTTCTAGTATTGCATGTGGTTG
(TTTC)12 250–298 40 11 0.925 (0.885)
Onychostoma sima OS-SSR9
c
F:TCATTGGCTGATATGTGACC
R:ATTCTTATTTGCGAAAAGGA
(TTTC)9 186–258 40 9 0.850 (0.829)
Onychostoma sima OS-SSR10
c
F:GTCTTCATTTTGTCATTTTGGTA
R:ATGATTGACAGTTTTCAGCCT
(TTTC)11 260–300 40 8 0.900 (0.826)
Onychostoma sima OS-SSR11
c
F:CTAGGCAGTGGCTAGAGTATTT
R:ATTCTACTTTTGACTGGTAGAAGAG
(AAAG)12 162–214 40 8 0.650 (0.788)
Onychostoma sima OS-SSR12
c
F:AAGGCGCTATAGAAAATACAGAT
R:TTAAATTACATACAGGCCTAACAA
(AAAT)6 196–234 40 6 0.825 (0.787)
Onychostoma sima OS-SSR13
c
F:CATACTGTTCGTACAGTATTGGTGT
R:CTTGTTGTTTTAAGGATGTTTAGAT
(AAAT)11 249–277 40 7 0.692 (0.699)
Onychostoma sima OS-SSR14
c
F:TTAAATGAGTTTTCTTTGCTTTAG
R:CCTCCATGTTTCTGTTGATGTT
(AAG)8 218–239 40 8 0.944 (0.838)
Onychostoma sima OS-SSR15
c
F:TACTCCTGCAGAAAGTGAGTCC
R:ATGTTTTAATAGTTTTAGTTCGTGA
(TTA)11 142–172 40 8 0.906 (0.821)
Onychostoma sima OS-SSR16
c
F:ATCGTATTCTTTCAAATACAATTC
R:AAGAGTGCATCGCATTACTAA
(AAT)9 212–224 40 4 0.710 (0.700)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
51 52
Species Locus Primer sequence (50–30) Repeat motif Size range (bp) Sample size (N) Number of alleles (N
A
)H
o
(H
e
)
Onychostoma sima OS-SSR17
c
F:AAAGATTCTAAAACCTATAACCCTG
R:AAATAAACAACATTTTCTGCACTC
(AAT)10 200–227 40 8 0.795 (0.715)
Onychostoma sima OS-SSR18
c
F:TACTCCTTAAATTCTCCTCACCT
R:TCAAATAAGTATTGGACCCCTA
(TTA)11 172–190 40 7 1.000 (0.837)
Onychostoma sima OS-SSR19
c
F:CATGTTAAAGCCGTAAATTGTG
R:TTAAACAGTGTTAGGTTGTGCC
(GATT)9 170–202 40 9 0.667 (0.734)
Onychostoma sima OS-SSR20
c
F:CAACTGAGGCAACTGTTGAGTA
R:CCTGAATGAATCTTATTGAGCTG
(CATT)5 188–208 40 5 0.750 (0.694)
Onychostoma sima OS-SSR21
c
F:ATAGTTAAATACAGTAGCTATGGCT
R:TACATTCATGTACATCTATCTATCAC
(AGAT)18 208–256 40 11 0.725 (0.848)
Onychostoma sima OS-SSR22
c
F:AATTGTACAGATCAGTAGCAGCA
R:GATTTGAACATAATGAAGGAGAA
(ATCT)16 264–324 40 11 0.750 (0.799)
Onychostoma sima OS-SSR23
c
F:ATTTATCACGCTTAACCCATACC
R:CCAAATACCCCCTTCAGAC
(AGAT)14 226–274 40 12 0.875 (0.856)
Onychostoma sima OS-SSR24
c
F:CAATTATACTACTCTCCAAAAGTGC
R:GATAGCTAAATGACTATTAAACTTG
(ATCT)17 163–223 40 11 0.900 (0.882)
Onychostoma sima OS-SSR25
c
F:CCTGGTGAGAGAAAATGAGG
R:CAAGCTAAGTAATTGCAGAATGTA
(ACAT)7 108–128 40 4 0.400 (0.393)
Onychostoma sima OS-SSR26
c
F:TCTGGTAAGAGATAACTGGGTGT
R:CCTACTTCGACTACTTCAGCTAC
(GTA)10 111–129 40 4 0.525 (0.499)
Onychostoma sima OS-SSR27
c
F:TTTAGAGGGTGCCCATAGTAAC
R:ATTTCGGTGGTGTCAAGC
(AGC)8 255–264 40 4 0.605 (0.627)
Euterpe precatoria Epr01
d
F: \HEX[AGAGCTATGATGTGCGCTACC
R:GTGTCTTGGCCTTTCTCTGC
(CT)13 (GT)11 158–170 34 4 1.00* (0.55)
Euterpe precatoria Epr02
d
F: \FAM[CTTCTGCCATGCTCCTCATAG
R:CACAAACCTCCCTCCTAAGCTA
(TC)18 278–306 34 6 0.53* (0.58)
Euterpe precatoria Epr03
d
F: \NED[TCTCCATCTCCAACCTCCTCT
R:CTGCTCTATCCCATTCATCCC
(TG)16 AGCGAGTGAGT (GA)16 279–317 34 7 0.59* (0.68)
Euterpe precatoria Epr04
d
F: \HEX[CTCCAACCTACAAGAACAGCC
R:AGAAGCAGCAGCAACAGGTAG
(AG)19 257–265 34 4 0.38 (0.51)
Euterpe precatoria Epr05
d
F: \HEX[CTCTTGGATGGTGTCCTCTTCT
R:ACCAGACCCTCCTTTCCACTA
(CT)15 147–159 34 6 0.94* (0.76)
Euterpe precatoria Epr06
d
F: \FAM[CAGGGAAAACCTAGAACAGGC
R:5CCAGAGTATGGGTGATGCACT
(GA)19 226–262 34 8 0.41* (0.60)
Euterpe precatoria Epr08
d
F: \NED[GCCAGCAATACCAGGAGGTTA
R:GTGGGTGTGACTTTGTCGTG
(TC)15 203–221 34 7 0.68 (0.60)
Euterpe precatoria Epr13
d
F: \HEX[ATGGAAGTGGATCTGGCAAC
R:GTCAAGTAGGGAGTCCAGCAA
(AC)21 240–262 34 5 0.47* (0.68)
Euterpe precatoria Epr14
d
F: \NED[GCACATCTAGCAGCGTTCTCT
R:CAGACCGAACTGCCAAAAGT
(GA)22 238–262 34 5 0.15* (0.42)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
53 54
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Euterpe precatoria Epr15
d
F: \NED[GCCTTGCTGCTAATCTTGTG
R:TGAATATACGCCATCCCC
(TG)10 (AG)9 129–151 34 5 0.97* (0.59)
Euterpe precatoria Epr18
d
F: \FAM[CATGACAGTTTCGGAGCCTT
R:ATACCAGCCCATATTGCACC
(CT)8 212–240 34 8 0.59* (0.51)
Euterpe precatoria Epr19
d
F: \FAM[GAGAGTTTGGTTGTCGAGCTG
R:AAGCCTGATCTGTTGCGAGT
(TG)6 143–177 34 8 0.47* (0.74)
Euterpe precatoria Epr21
d
F: \FAM[CACTCTCCCCAAAGGAAGAAG
R:ATACTGGAAAAGCAGACCCC
(GT)18 224–234 34 3 0.29 (0.30)
Euterpe precatoria Epr22
d
F: \FAM[CTTTGGATGCTGGAAGGAAC
R:GCATCATACCATCAAGAGCG
(GA)17 143–147 34 3 1.00* (0.51)
Euterpe precatoria Epr25
d
F: \HEX[GGAGAACCTATTTCAGCCTGC
R:GAGGTTTGTGTTCACTCCTGG
(TC)6 224–276 34 11 0.44* (0.58)
Euterpe precatoria Epr26
d
F: \NED[AGGGGACAGAAATGGCTACA
R:CAATGCAACAGCAGAACCAG
(AC)14 147–169 34 12 0.91 (0.83)
Euterpe precatoria Epr27
d
F: \HEX[GTATGCACATTAGGGCTTCGC
R:ATGCGTGCGTGTTTTGGG
(CT)7 234–262 34 5 0.47 (0.39)
Euterpe precatoria Epr30
d
F: \NED[CGCTTTTCTATCCATCCCC
R:AGCAGAGAAGGGAAACCTGAG
(TC)6 (CA)12 349–367 34 6 0.35 (0.36)
Euterpe precatoria Epr31
d
F: \HEX[CTGTTTCCAACCTACTACTCCC
R:AAGCCTGCTAACCTGATAGGC
(CGTG)5 (TA)6 316–340 34 4 0.94* (0.63)
Euterpe precatoria Epr32
d
F: \NED[CTCTCTCTTTCTCTATGAGGGG
R:AGGGCAGAATGTCCACTAGC
(TTC)6 239–257 34 5 0.44 (0.43)
Euterpe precatoria Epr33
d
F: \HEX[GGCAAGGCTGTGAGAAAGTT
R:GGAGGGCCACTAGCTCTACTC
(GA)9 154–180 34 10 0.79 (0.80)
Euterpe precatoria Epr35
d
F: \NED[GTGTCGTGTAGGAAGCAATGG
R:GATCCGAGCCCATTTTGG
(AG)9 224–242 34 8 0.88* (0.80)
Euterpe precatoria Epr36
d
F: \FAM[CCTCTGGAACCTGTCAACAAG
R:CTTTCCTCCTCTCCGCTAGAA
(AG)19 156–180 34 7 0.47* (0.47)
Coilia nasus Cnasus3
e
F:CAGAACGCCTCCTCTCTCAG
R:GACGACCACCTACCTCCCTC
GAG(3*7) 152 36 5 0.4225* (0.7438)
Coilia nasus Cnasus4
e
F:AGGACAACATCAGCTTCTCAAAT
R:AGTGGTGGCGGTAGTATCAGTAG
ACC(3*7) 149 36 6 0.4225* (0.8014)
Coilia nasus Cnasus5
e
F:GAAATGGAGGCTGCTGATAAAG
R:CCTGTTCTGTTTGTTTTTCCTTG
GAG(3*7) 114 36 3 0.2340* (0.5216)
Coilia nasus Cnasus7
e
F:ACCACAGTAGCCAAGAACGG
R:GTAGCTCAAGACAGGCAGACAAG
CCA(3*8) 153 36 2 0.2766 (0.4139)
Coilia nasus Cnasus8
e
F:GGAAACAGACAAAACAGCAAAAC
R:AGCCATGAACTGCAGAAAATAGA
TTG(3*8) 157 36 3 0.5532 (0.6577)
Coilia nasus Cnasus9
e
F:GTCACTTACATTTTACGGGGGA
R:GTCCTCTGATTGTGGATGTTCTC
ATA(3*7) 140 36 4 0.4681* (0.6710)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
55 56
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Coilia nasus Cnasus12
e
F:TCTTCTGGAACAACCTACGACAT
R:AAGGTGCTGGAGGAGATGG
CTG(3*7) 152 36 2 0.4043 (0.3507)
Coilia nasus Cnasus22
e
F:GGTTTTGTCATTTTCCATATTGC
R:CCACACCCTACTATGACCTTTGA
GGT(3*7) 94 36 3 0.4681 (0.5813)
Coilia nasus Cnasus25
e
F:AAAAGGCAGGACTGGACAAAT
R:ACCGACAGGTGAAACTTTGG
CAG(3*7) 83 36 2 0.3404 (0.4997)
Coilia nasus Cnasus26
e
F:ATGAACAATGACAACAATCACCA
R:TGCCTTTACTGAGGACTTTGTGT
AAC(3*7) 133 36 2 0.4468 (0.4139)
Coilia nasus Cnasus27
e
F:CTTGTAGTTGGTTAGGGCAGAAA
R:GGACGTTTAAGTAGCATGGAATG
TTG(3*8) 117 36 5 0.5957* (0.7495)
Coilia nasus Cnasus28
e
F:CAAAAAGATGCTCTGAGGAGAGA
R:GCAGACACAGACACTTGGGATAG
TCCG(4*6) 117 36 3 0.5957 (0.4850)
Coilia nasus Cnasus29
e
F:ATCTCCATCCTTCTTTCCTGTGT
R:GACAGAGTGAACGAATGAGCTTT
CTC(3*7) 139 36 3 0.5106 (0.5509)
Coilia nasus Cnasus34
e
F:TGGTGTAGGTGTGGGACTTGT
R:CACCACATCAGCCAGTCCT
GTG(3*7) 100 36 3 0.5106* (0.6351)
Coilia nasus Cnasus35
e
F:CTGTCTGACCCCCTAGCTCTC
R:TCTTTCTTTTCTGCTGAAGTGGT
AGA(3*7) 143 36 2 0.3191 (0.5045)
Coilia nasus Cnasus36
e
F:GAGAACAGGATGTGGAGGAGAT
R:CTGTGCAAGTCAATGTGACAGAC
CAG(3*7) 118 36 3 0.6596 (0.5868)
Coilia nasus Cnasus37
e
F:GAGTGCTACGACTCACCTACCAT
R:TAGCAAAGGAGACCGACTGTTAG
TA(2*11) 159 36 6 0.4468* (0.7625)
Coilia nasus Cnasus39
e
F:AGAGTGACCTGGATGCACTGAT
R:GGGCGACGAGTGGTGAAG
ACC(3*7) 118 36 2 0.5745 (0.4605)
Coilia nasus Cnasus41
e
F:CTCGTTGATCTGGATGTTGATGT
R:ACCCTCCCCGAGACACTACT
GTG(3*7) 157 36 3 0.8750 (0.5629)
Coilia nasus Cnasus43
e
F:TGTAGAATGGATTCCCAGCATAC
R:TATTAAAAATAGACACGGCGGAC
CTGC(4*6) 136 36 2 0.2083 (0.4034)
Coilia nasus Cnasus44
e
F:CTCCTCAGTGCTCAGTGGTAACT
R:CTTTACAACACACATGCTTACGG
CA(2*6) 80 36 2 0.4167 (0.4965)
Coilia nasus Cnasus46
e
F:ACCAATGGTCATTCAGACAGACT
R:GTGAGTTGCATGTGTGTTCCTTA
GAA(3*7) 137 36 2 0.9167 (0.5071)
Coilia nasus Cnasus49
e
F:CAGATTAAAGTTCATGAGGCTGG
R:GTATTCGCTGTTTGTGCTTCTTT
CAT(3*7) 136 36 3 0.2500 (0.6090)
Coilia nasus Cnasus51
e
F:ACTACACCTAGCATGGTCCAAAG
R:GCTCTGCACAGCTTCATTTTATC
GAA(3*7) 144 36 2 0.8750 (0.5027)
Coilia nasus Cnasus53
e
F:GAACATCTTCTGGAAGTCTGTGG
R:CCTTCTGCTATGAGAACGAGGT
CCT(3*7) 143 36 4 0.4167 (0.4911)
Coilia nasus Cnasus54
e
F:CGCATTATGATCCAGTTTAAGGT
R:AAAAAGGGCAGAACATTTTAACC
TTTA(4*5) 129 36 3 0.7500 (0.5470)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
57 58
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Coilia nasus Cnasus55
e
F:AGTTTTTCAGTGCGTTTGTAACC
R:GAGGCATCGATAAGAACCTGTCT
CAT(3*7) 145 36 2 0.5833 (0.5071)
Coilia nasus Cnasus57
e
F:GCTCCTACAGTTTCTTACAAAGGC
R:TTTTCATAGCACTCACAATTTCG
ATA(3*7) 160 36 3 0.7083 (0.5186)
Coilia nasus Cnasus58
e
F:GACTGTGCCTGCTGAAGATACTC
R:GGTCTTCAGGTGGTAGACAGGT
CCA(3*7) 103 36 2 0.7083 (0.5027)
Coilia nasus Cnasus60
e
F:TTTATGAACAGACCGAAGCTTGT
R:ATGACTACTGGTGAGCAAATCCT
AAG(3*7) 141 36 2 0.7917 (0.4885)
Coilia nasus Cnasus62
e
F:GCCATAGTACCTGTCCTTTCTGA
R:GGGTAGTGTTGGCTTTACACATC
AAT(3*7) 109 36 3 0.1250 (0.1215)
Coilia nasus Cnasus64
e
F:GGAAACCCTGGAACTACTTCACT
R:TGACATCAGTCCTGATATTGGTG
AAT(3*7) 143 36 3 0.8750 (0.5895)
Coilia nasus Cnasus65
e
F:GAATGGACACGTCTGTTTTTACC
R:GTTATGGCAAGGTGAAGAATTTG
TAT(3*7) 148 36 2 0.2083 (0.4388)
Coilia nasus Cnasus66
e
F:ATATATCTGCTTTCAAGGGGGAG
R:TAGTTGGTTTTGTCGTTTTCCAT
CAC(3*7) 80 36 2 0.7083 (0.5027)
Coilia nasus Cnasus68
e
F:GCTTGTCCAATCAGACACCTC
R:GAGGATGGAGCTGATCTTGC
CTC(3*7) 140 36 2 0.3750 (0.3112)
Coilia nasus Cnasus69
e
F:CAGGCCAGAGAGAACAGAGG
R:TTTAGAAATGCTGAGTGGACACC
CTG(3*7) 148 36 2 0.0833 (0.0816)
Chaetomys subspinosus Chae02
f
F:AGGCAATCTTATCTGAGCACTTG
R:TCAGAGCAAGGGTACGACAG
(AC)24 148–192 20 6 0.824 (0.656)
Chaetomys subspinosus Chae06
f
F:TGGCAGAGCACTTTTGGTTC
R:TGCAGCATTTCTTCTAACATTTGTG
(AC)13 82–112 20 6 0.368 (0.679)
Chaetomys subspinosus Chae07
f
F:CTCTCTGTGTGCATGTGCG
R:TGGTCGTATACCCTTATGGC
(GT)14 108–142 20 7 0.563 (0.829)
Chaetomys subspinosus Chae08
f
F:GTAGCTCAATGTGAAGCCCC
R:TACTCAGGCGTGCATCCTAC
(AC)22 134–162 20 6 0.895 (0.671)
Chaetomys subspinosus Chae10
f
F:GTGTGGAACAGCCTCACTTG
R:TTACACATGGGCCCCCTTC
(AC)11 108–158 20 6 0.4 (0.545)
Chaetomys subspinosus Chae13
f
F:ATGAGATGTTCCCAGAGGGC
R:CCACAGAGTTTCAAGGTCAGC
(AC)14 126–178 20 17 0.765 (0.947)
Chaetomys subspinosus Chae14
f
F:ATTGTGGACCTGCCAGCC
R:ACGCGAGACCGCCAATTC
(AC)12 126–142 20 8 1.000* (0.75)
Chaetomys subspinosus Chae15
f
F:TCAAGACAGGTGTGGTAGGC
R:TCTCCAGATTCCACTGCACG
(TG)12 104–152 20 8 0.364* (0.805)
Chaetomys subspinosus Chae18
f
F:CCATGGACTCAGCATGGTTTC
R:GAGTTTCTTCAGCAGGTGGC
(TG)16 126–164 20 3 0.9 (0.559)
Chaetomys subspinosus Chae28
f
F:CCTTGCTGTTGATTCCCGAC
R:AGTCCCCTCGAAATCCTCTC
(CA)12 144–164 20 8 0.563 (0.815)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
59 60
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Chaetomys subspinosus Chae30
f
F:AGCTGCATAAAGAGCAAGGG
R:GCCAAACAACTGTGGTCTCC
(AC)14 102–176 20 14 0.692 (0.932)
Chaetomys subspinosus Chae32
f
F:ACTACTGTCGCCCAGAACAG
R:GGCACATTTGTCCAAGGTCAG
(CA)13 150–178 20 2 0.765* (0.508)
Chaetomys subspinosus Chae39
f
F:ACTGAAGAAATTCATGACCACC
R:AAGACTGACACAACACACGC
(TG)14 82–116 20 10 0.9 (0.871)
Chaetomys subspinosus Chae45
f
F:GAGCAGAGCAAGTGTCCATC
R:CGCTGTCTCTTCTCTCAAGC
(CA)18 100–142 20 11 0.75 (0.869)
Chaetomys subspinosus Chae51
f
F:TGCGTAACTCCCTCTGTCTC
R:AATGGGCTGTTCTGGTAAGC
(CA)12 190–296 20 10 0.895 (0.836)
Chaetomys subspinosus Chae53
f
F:CACTGTGTAGTTCAGTCACTCC
R:TCTAAGCATGTGTGAGCCCC
(GT)12 100–122 20 7 0.143* (0.791)
Chaetomys subspinosus Chae58
f
F:TGGGGCTAAGGCTCAGTATG
R:TTCGTGAACCAAGGTACCGC
(AC)13 114–164 20 13 0.706 (0.875)
Chaetomys subspinosus Chae68
f
F:GGGAGCGTGGATTTTTCTGG
R:TCCGTCTTGTCTCATTCTCAAC
(GT)16 116–156 20 8 0.5 (0.804)
Chaetomys subspinosus Chae69
f
F:TGACCCTGGGAATCATAGCTG
R:ACACCACAGGTCTGTCTACG
(GT)13 86–110 20 8 1.000 (0.806)
Chaetomys subspinosus Chae78
f
F:GCCTCAGCCTTTGAGATTGC
R:TCAGATGCTCAGTTCAATACCC
(GT)20 102–152 20 8 0.714 (0.857)
Chaetomys subspinosus Chae80
f
F:CCTCTTTAGCCCACCCCTTC
R:CTAAGTGCATTTGCGTGTGC
(CA)12 102–138 20 5 0.571 (0.603)
Chaetomys subspinosus Chae85
f
F:TGGCTCACATTATTTCTCACCC
R:TTAGCCAGCTCTTTGTGTGC
(AC)16 100–120 20 7 0.947 (0.787)
Chaetomys subspinosus Chae88
f
F:CGCATGTGTGCCTGTGAG
R:AGTGAACAGTTTGCGATGCC
(GT)17 82–120 20 11 0.95 (0.865)
Chaetomys subspinosus Chae89
f
F:AGCACACAGTCGAGAAGAGG
R:ATGGCAAAGAGATGTGCGTG
(CA)11 134–160 20 5 0.444 (0.459)
Chaetomys subspinosus Chae95
f
F:GATCTGGCGTGAGTGGGAG
R:GTCACGGGTGAGTGTTTTCC
(CA)18 192–246 20 14 0.895 (0.903)
Chaetomys subspinosus Chae96
f
F:CGTCCTCCTTGAGGGTGTAG
R:TCACTGCCCACCTGTGATAC
(AC)11 180–190 20 7 0.273* (0.593)
Chaetomys subspinosus Chae98
f
F:CTCAGTACCTCCCTACGCAC
R:ACCTGGCTCCTTTCTTCATTTATTAG
(AC)11 84–114 20 5 0.25* (0.389)
Chaetomys subspinosus Chae99
f
F:TATGAGCAAGCGTGTGTGTG
R:CCAAACCAAAATAGGAGAAACAGC
(TG)13 82–98 20 4 0.65 (0.56)
Chaetomys subspinosus Chae101
f
F:TCTCTCTCGCACGATGCAC
R:ACCCTGCTATTGCTCTTCCC
(CA)17 112–156 20 14 0.95 (0.885)
Chaetomys subspinosus Chae102
f
F:GATTTGCTCTGTGCTCCCTG
R:ATCGTTAAGTAGATTCACACTGC
(CA)14 132–178 20 9 0.923 (0.871)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
61 62
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Spinibarbus caldwelli P4
g
F:TATTCGCATCAGAGCTGCAC
R:GCTCTTTCCAAGTGCCTCAC
(CA)
9
193–220 48 6 0.625 (0.763)
Spinibarbus caldwelli P18
g
F:TTCTTGTGTTCAGTGCTCCG
R:TCTAAGAAGGAGAGCAGCGG
(AC)
11
184–217 48 8 0.619 (0.767)
Spinibarbus caldwelli P23
g
F:TTTGTCTTTTTCAGGCCAGG
R:CCTGCCAACTTGTCCAGTGT
(TG)
11
214–257 48 9 0.708 (0.856)
Spinibarbus caldwelli P27
g
F:TGCTTCTGTTCATCAGCCAC
R:CCATTGCTGGTCTGGATCTT
(AC)
7
127–167 48 7 0.458 (0.761)
Spinibarbus caldwelli P28
g
F:GCGGTTCCGTGAGTGTTTAT
R:CAGAGCATCCTCTACCCCAG
(TC)
9
181–246 48 11 0.542 (0.875)
Spinibarbus caldwelli P35
g
F:TCCTCATCCTCATCCTCCAC
R:CAGCTTCAGCTCTCCGTTCT
(AG)
9
268–336 48 13 0.625 (0.900)
Spinibarbus caldwelli P41
g
F:ACAAGCCAAACCCCTTCTCT
R:CCCTGACCTTGATGTGCTTT
(GA)
9
221–257 48 8 0.583 (0.814)
Spinibarbus caldwelli P43
g
F:ACAAGGTAATGATGAGGCGG
R:ATGGCCATTTTCCCTTTACC
(GT)
10
157–196 48 6 0.250* (0.704)
Spinibarbus caldwelli P47
g
F:TGGATGTGGAGAGCACAGAG
R:AGGGAAAGGTGGCTAGGAAG
(CA)
9
225–275 48 11 0.458 (0.897)
Spinibarbus caldwelli P49
g
F:TATAGAACGGCAAGGCAAGG
R:TGTGTCTGCCGCTGAAATAG
(CA)
10
124–152 48 6 0.792 (0.805)
Spinibarbus caldwelli P52
g
F:CTTGCTGTGCAGCGTATTGT
R:AAATCAGCAGCATTCGGTCT
(TG)
9
267–359 48 11 0.833 (0.889)
Spinibarbus caldwelli P59
g
F:AGGACTTATCCTGGGCCACT
R:TGCCATGATTAACGAAACACA
(AC)
7
318–341 48 6 0.125 (0.762)
Spinibarbus caldwelli P64
g
F:TCCTGAGCAAGAAAAGCACA
R:TCCAACCTGCCTAAATCACTC
(CA)
11
217–259 48 9 0.472 (0.791)
Spinibarbus caldwelli P66
g
F:GTGACGCACGAAACTAAGCA
R:CATGCATTTATGCACAGCCT
(AC)
9
228–283 48 11 0.833 (0.876)
Spinibarbus caldwelli P67
g
F:CACTTTCCCTGCTGGTTTGT
R:TTGCACTGTAAACGCTGAGG
(CA)
9
250–298 48 11 0.292 (0.856)
Spinibarbus caldwelli P70
g
F:GAGGGACTGCAGCTTAAACG
R:TGCTGTTTTGGCTTCATCTG
(GT)
9
147–182 48 7 0.208 (0.821)
Spinibarbus caldwelli P81
g
F:GCCATGATATGCGTTCACAC
R:GCAAACATCACTTCATTTTGACA
(TG)
10
246–406 48 20 0.875 (0.942)
Spinibarbus caldwelli P93
g
F:TTTTTGGGTGTTGCTTGACA
R:GGGGGACAAATAAAAGCCAT
(GT)
9
184–230 48 9 0.667 (0.814)
Spinibarbus caldwelli P97
g
F:CCCTCAGAGAAGCATTAGAAGAA
R:TGTCTGCTTGCCTGCAATAC
(AG)
9
264–283 48 8 0.705 (0.897)
Spinibarbus caldwelli P99
g
F:GACATTGTTCTCTCCTGCCC
R:TCACCGCAATGCTAATTCAC
(GA)
10
96–131 48 7 0.674 (0.715)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
63 64
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Spinibarbus caldwelli P107
g
F:CACACCTCACACACCTCCTC
R:AGCACCAAAGCCAATGTGTT
(CA)
11
240–269 48 12 0.834 (0.910)
Taihangia rupestris
Taihangia ciliate
TrSSR1
h
F:ACATCATCGTAACCAAGACC
R:CCCTCAAAACCCAAAAGA
(AG)
10
230–234 20 1
3
0.000 (0.000)
0.471 (0.400)
Taihangia rupestris
Taihangia ciliata
TrSSR10
h
F:CACCACCATCGTCATCCTA
R:CCCACTGTCACCCTCAAAC
(AT)
10
(CT)
9
308–314 20 3
4
0.491 (0.350)
0.609 (0.500)
Taihangia rupestris
Taihangia ciliata
TrSSR13
h
F:TTGTCCAGTTGCCCACGAA
R:CAGAAAGGAAACGGCGAAG
(CT)
9
155–167 20 2
4
0.489 (0.650)
0.735 (0.750)
Taihangia rupestris
Taihangia ciliata
TrSSR14
h
F:CAAGCAACATTTACATACC
R:TTCTTTTCTTCCATTTCC
(AAAC)
8
234–242 20 2
2
0.495 (0.700)
0.480 (0.700)
Taihangia rupestris
Taihangia ciliata
TrSSR25
h
F:CGTCGGCTTTTCAATCTGG
R:AAACAACGCTTCTCCTCCCT
(GTT)
7
188–191 20 1
2
0.000 (0.000)
0.375 (0.200)
Taihangia rupestris
Taihangia ciliata
TrSSR31
h
F:GGGCGGTGCGTTGGATGTAG
R:GGTGGTGGTGACGGGGCTCT
(GGA)
7
194–200 20 1
3
0.000 (0.000)
0.579 (0.600)
Taihangia rupestris
Taihangia ciliata
TrSSR33
h
F:ATTTCTCGGGTCGGGTATCA
R:GCTTCCGTCATCAGCAGTCA
(TAA)
7
268–274 20 3
2
0.609 (0.550)
0.420 (0.200)
Taihangia rupestris
Taihangia ciliata
TrSSR35
h
F:TTCCTTCACCAATCGCTTTC
R:GCTTCCTCCTTCCTCTTCG
(AGC)
7
260–263 20 3
2
0.571 (0.250)
0.320 (0.400)
Taihangia rupestris
Taihangia ciliata
TrSSR37
h
F:GTGTTTCAGTTGACGATGTA
R:TTTCACTATGCCTTTTATGT
(TG)
10
302–306 20 2
3
0.489 (0.450)
0.465 (0.500)
Taihangia rupestris
Taihangia ciliata
TrSSR39
h
F:GGAGGAGGGCAGAAGGGTA
R:CAGGGAGATTGAACTTGACAGAC
(AAC)
7
309–318 20 2
4
0.455 (0.300)
0.726 (0.800)
Taihangia rupestris
Taihangia ciliata
TrSSR41
h
F:GACTACAGTGGTGGCTATGA
R:TCGTGCTTTTCTTTCTAATC
(AAC)
7
236–248 20 3
2
0.599 (0.400)
0.469 (0.250)
Taihangia rupestris
Taihangia ciliata
TrSSR44
h
F:GCTTCCTCCTTCCTCTTCG
R:TCCTTCACCAATCGCTTTC
(ACC)
8
280–286 20 2
3
0.469 (0.350)
0.559 (0.800)
Taihangia rupestris
Taihangia ciliata
TrSSR47
h
F:GAAGGGTAGCGGAGACAGAA
R:ATAGCCCGTTCCTTCGTTTT
(AG)
5
A(AG)
3
217–225 20 3
5
0.551 (0.700)
0.725 (0.500)
Taihangia rupestris
Taihangia ciliata
TrSSR50
h
F:TGGGTATCACCAGAGCG
R:GTGGAGGAGCACAAACG
(AGA)
8
344–353 20 3
3
0.480 (0.400)
0.601 (0.600)
Taihangia rupestris
Taihangia ciliata
TrSSR51
h
F:GAAGAAGGGAAAATAGAAAA
R:ACTCAAAGAGGGTGTTAGG
(CACTTC)
8
291–297 20 1
2
0.000 (0.000)
0.489 (0.650)
Taihangia rupestris
Taihangia ciliata
TrSSR52
h
F:CACAGCCAAATAGTAAAGC
R:AGACGAGGAGGAAGAAGAG
(CAATTT)
6
291–303 20 3
3
0.646 (0.600)
0.661 (0.900)
Taihangia rupestris
Taihangia ciliata
TrSSR55
h
F:TAATCTAATCCCAACCCTC
R:CATTCATACCGAAATAACCT
(GA)
8
335–341 20 4
4
0.536 (0.750)
0.479 (0.450)
Taihangia rupestris
Taihangia ciliata
TrSSR56
h
F:GGACTTTGCCTAAACCACCAT
R:CTGATTCCTCCCACTCTTGC
(TA)
8
271–273 20 2
2
0.375 (0.400)
0.499 (0.450)
Taihangia rupestris
Taihangia ciliata
TrSSR61
h
F:AAGCCCTGTTGGTCATTGTT
R:AAGCCCTCCATCTCCACTAT
(TAG)
7
278–281 20 3
2
0.615 (0.500)
0.455 (0.700)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
65 66
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Taihangia rupestris
Taihangia ciliata
TrSSR66
h
F:ATAATAACAGCCAGAACGGAG
R:CGAACGAATGAAAAGGACC
(AAG)
6
268–274 20 3
3
0.636 (0.500)
0.524 (0.450)
Taihangia rupestris
Taihangia ciliata
TrSSR83
h
F:GTCAACCTCAGACCAAAACAA
R:ATACAACGCAACTGCCATACT
(GAA)
6
163–169 20 2
1
0.469 (0.550)
0.000 (0.000)
Taihangia rupestris
Taihangia ciliata
TrSSR85
h
F:ACTCGTCGTCATCCCGTCTAT
R:GTAAGGGTCTCGCCGTATCG
(AAGG)
5
267–275 20 3
3
0.531 (0.600)
0.466 (0.650)
Taihangia rupestris
Taihangia ciliata
TrSSR88
h
F:CGCCAAAAGGAATCTAAGTC
R:AGTAGGGCAGAAGAAAAGTGA
(GT)
7
199–203 20 2
3
0.320 (0.400)
0.515 (0.400)
Taihangia rupestris
Taihangia ciliata
TrSSR90
h
F:TCGTTGAGGGAAAGTGGTTA
R:TATCGCAAATCGGGAAAGA
(TC)
7
259–265 20 3
4
0.445 (0.300)
0.679 (0.500)
Circus cyaneus 00703
i
F:TAGACAGGTAGGTAGGTGGG
R:GGGTCCAGCCTGAAAATTGG
(AGAT)
11
174–207 63 9 0.794 (0.830)
Circus cyaneus 43895
i
F:CCTGTGCAGCTTGTGTATAGC
R:CCGGTCTCAGAGGAACAGATG
(AGAT)
12
148–176 63 6 0.667 (0.680)
Circus cyaneus 04693
i
F:CATTGTGCTATTTCATATGTTTCTGGTG
R:TGTTTCCTTGGTAGGATGGC
(AAAC)
10
241–253 62 4 0.484 (0.610)
Circus cyaneus 22316
i
F:CTGAGGTCAAGAATGGGCTAC
R:TCCATGGGCTGTATGTCAGG
(AAAG)
10
240–291 62 13 0.968 (0.896)
Circus cyaneus 62369
i
F:GATTTAGCGCAGTTTTGTTCCTG
R:GTCTTAAACAAGAGACAATCTAGGGG
(AAAC)
11
112–133 63 6 0.698 (0.672)
Circus cyaneus 55457
i
F:GGGGACCTCTTCAGCTAACC
R:CAAAAAGTGGAAAGTAACACCGAGG
(AAAC)
8
105–113 63 3 0.413 (0.442)
Circus cyaneus HH09-C1
i
F:GGAAGCAGACTAAGTAACCTTG
R:CAGTGTTAGGATTAACCTAAGCTG
(AAAC)
3
GAAC (AAAC)
5
254–266 62 4 0.677 (0.654)
Circus cyaneus HH09-C3
i
F:CTGAACACAGGTTAGAATTTGATTTGC
R:AGATGCTGGTCTGAAGTTTGC
(AAAAG)
5
236–241 21 2 0.143 (0.136)
Circus cyaneus HH11-G7
i
F:TGTATATTCCACTGAGACAGCTG
R:TTGGTGTTTCAAGGATGCATG
(CAGCTTTCTTT)
10
132–199 63 7 0.667 (0.739)
Circus cyaneus HH10-B6
i
F:CTGACCTGCCATTCCAGAAC
R:GCTCATTTCCTCGGAGACAC
(AACAG)
3
AAC (AAACC)
3
145 20 1 0.000 (0.000)
Circus cyaneus HH11-B2
i
F:TACATCTATTCAGGATGGAGGC
R:GGAACATTAGCTTGTGATTGC
(GAAAGGAA)
3
(GGAAGAAA)
5
258 20 1 0.000 (0.000)
Circus cyaneus HH13-E12
i
F:TCAAAAGTTGTGAGTGAGGCTAC
R:GTGATTCAGATGCTCCCTGG
(AGAT)
4
163 22 1 0.000 (0.000)
Circus cyaneus HH13-G11
i
F:CCTCTATCCCAAACTGCA
R:GCCATTACTAACTCTTGGAATTC
(AGAT)
2
AGGTAGGC (AGAT)
5
119 22 1 0.000 (0.000)
Circus cyaneus HHIEAAAG14
i
F:GGGGAGAAATTGTGACAGG
R:TAGTTCAAGGGGAAGGGC
(AAAG)
28
174–244 54 18 0.870 (0.924)
Circus cyaneus HHHf-C1D10
i
FCTCCTGCTAGAGTCAAGAAG
R:GGTAATAATTTCTGTCAGAATGTGC
(AAG)
5
AGG (AAG)
32
179–265 48 12 0.688 (0.773)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
67 68
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Circus cyaneus HHHal 03
i
F:CCTGTGTCAGCTTGGGAG
R:GCATCCCTTCAATCTGTTACACTTC
(AAAC)
5
115 20 1 0.000 (0.000)
Circus cyaneus HHHal 14
i
F:TGCAGCTCTCTTGGACAC
R:TTTCAGCGATGCTCCAGC
(AGG)
10
99–115 63 4 0.667 (0.668)
Circus cyaneus HHHal 16
i
F:CACCTAGAGATAACAAGCATGTAC
R:TCTATACGCAACTTGATGGTTC
(AAAC)
7
(AAAACC)
3
111–115 53 2 0.058 (0.057)
Circus cyaneus HHBswB220w
i
F:GCAAAGCCCACTAGTACAAG
R:CCTTCGTAAACCCCTACTAATTC
(AAT)
15
86–110 63 9 0.730 (0.846)
Circus cyaneus HHBswB221w
i
F:ATTTTCCATATTACGGAGTAACGTC
R:GCAAAAGTAACTCACTTTACTGG
(AAT)
2
(GAT)
2
(AAT)
5
141 21 1 0.000 (0.000)
Circus cyaneus HHBswD220w
i
F:AATAATCATTTACAACACAGAGATGG
R:GACAGATGATTGTAGTAGGTCC
(ATGGA)
15
(GAAGA)
34
252–394 46 24 0.870 (0.923)
Circus cyaneus HHBswD223w
i
F:CCACAGGCAAAAGAAAGAGAG
R:CATTTTAGGTCCCTTCCAACTG
(AAGAG)
9
GAG (AAGAG)
63
382–469 25 11 0.120* (0.844)
Circus cyaneus HHBswD327w
i
F:GAATGGGAATGGAACAGAATATTG
R:GGTTTGCAGATGAATGACAC
(AAGAG)
18
AA (AAGAG)
10
128–258 41 21 0.902 (0.896)
Epinephelus awoara YEGR-8
j
F:#ACTGTCCAAAAGTATGTG
R:GGACAGCCACCATCCTAT
(ATCT)13 116–176 30 13 0.6000 (0.9208)
Epinephelus awoara YEGR-9
j
F:AAGTATGGCAGCGACACC
R:#CCACAACCACAGCAAAGC
(TATC)9(TGTC)7 236–300 30 15 0.7407 (0.9043)
Epinephelus awoara YEGR-11
j
F:GATAGATGGGTTAGGTAGGTTGG
R:#CTGATTCACTGTTTAGACATTCGT
(TAGA)27 187–247 30 15 0.6429 (0.9357)
Epinephelus awoara YEGR-17
j
F:#CGGCGGAAGGAGGTT
R:AGGCAGGAGATACAGGTCA
(TAGA)7 257–305 30 11 0.4815 (0.8700)
Epinephelus awoara YEGR-19
j
F:#TCTTGTGACTTTGGGGACT
R:GGCTTTAGCATTTGGTGTA
(TCTA)11 342–414 30 16 0.8667 (0.9305)
Epinephelus awoara YEGR-20
j
F:GCAGACAAAAAGACAAACACGAGATA
R:#CATACATCCAACCTGACCACC
(TAGA)9 52–136 30 14 0.4828 (0.6776)
Epinephelus awoara YEGR-22
j
F:GTGATGTTGGCTGTTTGTGC
R:#TGCCCTTTATCTTGATTGTGGA
(CTAT)5 115–207 30 14 0.4091 (0.9070)
Epinephelus awoara YEGR-24
j
F:#CAATTTGAGTCTGTGCTGC
R:GTTTGTGTTGTTTTGTAGGCT
(GATA)8 228–292 30 12 0.8276 (0.8966)
Epinephelus awoara YEGR-26
j
F:ACTGCCCAAGTGCCAGAT
R:#AACCTTACAAGGGAGACTCAAA
(TCTA)17 207–267 30 13 0.5833 (0.9202)
Epinephelus awoara YEGR-28
j
F:AGGGTCCAAAGGACAGAGG
R:#TGCTCCAGGTGTTAGAACTCAG
GATT 232–260 30 11 0.7931 (0.8863)
Epinephelus awoara YEGR-30
j
F:#ACATGACAAACCTGGGACT
R:CGATTGGTAGACAGCGACA
(TCTA)22 194–338 30 10 0.3913 (0.9064)
Epinephelus awoara YEGR-31
j
F:ACCCACGCTTACACAATG
R:#TACCTCTCTTTACCCCCTT
(AATC)7 207–244 30 12 0.8000 (0.8345)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
69 70
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Epinephelus awoara YEGR-39
j
F:ACATGGAGCAGTGACGGAG
R:#TGAAGGAGATGCTGATGCC
AACA 143–277 30 9 0.7586 (0.8457)
Epinephelus awoara YEGR-40
j
F:#TGCAGTTGGCATCAGCAT
R:TTAAGCACCAGGAAATACATCAT
ATCT, ATCC 163–247 30 13 0.6923 (0.8989)
Epinephelus awoara YEGR-41
j
F:GTTTCTTTGTAGTGTATGTTAAGTA
R:#GTACCTATAAGCCTATAGTCTACCT
TAGA 221–265 30 15 0.6667 (0.7746)
Epinephelus awoara YEGR-46
j
F:#ACAGGCACAGCGTGTTAT
R:GAATGTTATCTGCTTTATGGGA
(GATA)10 104–180 30 16 0.8929 (0.9214)
Epinephelus awoara YEGR-49
j
F:AGTGGGCTCTTAGCGTGGAT
R:#CCGCTTAGAGTGCCGAAA
(TCTA)12 202–278 30 13 0.5833 (0.9202)
Epinephelus awoara YEGR-56
j
F:#GCTGTTGTAATGCCAGATG
R:GTGTCAAAAGAAGGAGGTCA
AGAC, AGAT 162–218 30 15 0.8214 (0.9214)
Epinephelus awoara YEGR-60
j
F:ACAGATGATGAACCACCCA
R:#ATGCTAATTTCCGCCCTA
TGTC, GATA, TCAT 384–452 30 12 0.7143 (0.7340)
Epinephelus awoara YEGR-65
j
F:#TGGCGTCATCCCTCTGG
R:GCTTGAACTACTCTGCACTGTCA
(TACC)4(TATC)27 168–284 30 12 0.5385 (0.9080)
Epinephelus awoara YEGR-67
j
F:#GTGAAATGTTTGGAGG
R:AAGAAGGAGGTCAGATTGC
AGAC, AGAT 151–248 30 14 0.5909 (0.9323)
Epinephelus awoara YEGR-70
j
F:CCGTAGGAGATGACAAAGAAAT
R:#CCTCTTGCAGCAGAATCCCA
(CTAT)29 228–312 30 15 0.3600 (0.9331)
Epinephelus awoara YEGR-71
j
F:#TGGTGTTTTCAAGTGCTCA
R:GTCCTGCTAGTTGTCCTGTT
(TATC)15 293–365 30 12 0.5667 (0.8463)
Epinephelus awoara YEGR-72
j
F:CCTGTCCATCACCCTTGT
R:#CCTTTGTCAGTGCTTTGC
(TAGA)15 195–243 30 11 0.6154 (0.9163)
Syngnathus schlegeli HL-1
k
F:CGAATGGTTGTATGTCTCTGT
R:AGCATAAGGATGTTTGTCTCA
(ATGG)7 206–264 24 13 0.957 (0.910)
Syngnathus schlegeli HL-2
k
F:CGAATGGTTGTATGTCTCTGT
R:TTGCCCAATAACATATAATGC
(ATGG)4 170–226 24 12 0.522* (0.891)
Syngnathus schlegeli HL-3
k
F:CCCATTGTTTAAATTGACTTG
R:CATATTTCTGACACGTAACTGG
(AC)19 208–278 24 14 0.826 (0.929)
Syngnathus schlegeli HL-4
k
F:GCGAGTTCTAGCAATTACATC
R:CATTCAACAAAGCCTTATGAC
(GATA)21 146–214 24 16 0.917 (0.926)
Syngnathus schlegeli HL-5
k
F:CACCGACAAGATGAATAGAAC
R:ATTGACGGTTGACCAAATAC
(ATCT)38 153–227 24 14 0.995 (0.925)
Syngnathus schlegeli HL-6
k
F:GAATAAGCCACACTAAAGCAG
R:CTAAATTGTGAACCAAATCCA
(TATG)11 206–260 24 10 0.824 (0.868)
Syngnathus schlegeli HL-7
k
F:TGGATGGATGGATGATAGATA
R:TCCCATTTGCTAGTTAGATCA
(ATAG)5 217–261 24 11 0.955* (0.890)
Syngnathus schlegeli HL-8
k
F:GTGACTACTTCCTCTGCTCCT
R:CATTTCAGGTTCACCTATCAG
(CA)15 161–223 24 12 0.810 (0.909)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
71 72
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Syngnathus schlegeli HL-9
k
F:ACTGAGCTGGCCTATCTATCT
R:ACATAGTCTCTCCAGCGTGA
(AG)27 237–289 24 7 0.996* (0.858)
Syngnathus schlegeli HL-10
k
F:ATAAGCGGAAGAAGATGGAT
R:ATCATCTAGTCAGCCATTCTG
(TGAG)20 225–271 24 5 0.375* (0.781)
Syngnathus schlegeli HL-11
k
F:GTAATTGAAGCCCGTCTGT
R:TTGTGCGTGTTTGTCTATGT
(AAAT)15 164–218 24 9 0.913 (0.806)
Syngnathus schlegeli HL-12
k
F:CCGTGAAATAAACAGATGCT
R:GTTTGTGTGTATTGTCCATCC
(TGGA)22 206–250 24 9 0.909 (0.866)
Syngnathus schlegeli HL-13
k
F:TAGATAGACGGACGAACAGAT
R:GGAATATCCACCTTTGGTTAG
(AGAT)32 204–256 24 16 0.998 (0.945)
Syngnathus schlegeli HL-14
k
F:GTCAGAAGCATTAAGACCAGA
R:GGTCATCAATTACAGGCTAAA
(ATA)29 261–285 24 2 0.375 (0.311)
Syngnathus schlegeli HL-15
k
F:CATGGAGAAGAGTCATTGGT
R:GTCATGTATGCACAGATTGG
(CA)25 213–265 24 7 0.792 (0.794)
Syngnathus schlegeli HL-16
k
F:CCCTGCCATTATCTATCCTAT
R:CAGTAAAGGACTGAGGAATCA
(TAA)14 196–239 24 2 0.167* (0.507)
Syngnathus schlegeli HL-17
k
F:TCATCTGCTGATGTTACATTG
R:AAGATAATTGTGCTGTGGATG
(ATAG)23 183–237 24 3 0.292* (0.568)
Syngnathus schlegeli HL-18
k
F:AAAGGCAAGTTAAGACCAAGT
R:GATAATCACTGTGTGCCCTAC
(TCCA)5 251–301 24 2 0.583 (0.507)
Syngnathus schlegeli HL-19
k
F:AATGGTAAATCAAGTTGACGA
R:TATCTGGCCTGTTGATGTAAT
(AGAT)30 226–280 24 4 0.667 (0.752)
Syngnathus schlegeli HL-20
k
F:TCATATATTCGCAGGATTCTT
R:AGATGATGGATGGATGGATA
(ATCC)3 208–266 24 11 0.900 (0.906)
Syngnathus schlegeli HL-21
k
F:GCATGAACGAAATTATTAAGC
R:AAGATGTCAGTGTTTCCTTGA
(AAGA)30 195–251 24 11 0.875 (0.912)
Syngnathus schlegeli HL-22
k
F:ACCGGCACCTAACTAACTAAC
R:TTCATGTGGATATTGAAATCG
(ACTA)19 217–265 24 11 0.875 (0.903)
Syngnathus schlegeli HL-23
k
F:ACCGATCAGTAAGTTCCATTT
R:ATCTACTCCTGGGCTGAAAC
(TAA)3 230–280 24 10 0.792 (0.872)
Syngnathus schlegeli HL-24
k
F:CCTTCAATCAGCAGAGATAGA
R:ACATTACATCCAGCAAACAAT
(AGAT)4 235–257 24 5 0.708 (0.723)
Syngnathus schlegeli HL-25
k
F:TGGATTTAATGATTTGGAGTG
R:CGAATGGTTGTATGTCTCTGT
(ATCC)3 214–254 24 5 0.833 (0.764)
Syngnathus schlegeli HL-26
k
F:GCACCCTCCTAACTGTGA
R:AATTAAAGCAAGAACGGGTTA
(ATCC)4 229–251 24 5 0.286* (0.583)
Syngnathus schlegeli HL-27
k
F:TAGTGACATCAACGCCTCTAT
R:TGATTTGTGTAGCTGATTGAA
(GT)14 209–259 24 8 0.875 (0.876)
Syngnathus schlegeli HL-28
k
F:GCAACTTTAATGAGGATAGCA
R:GAATGAGTCCATGACCAAGTA
(GTTT)13 224–256 24 3 0.333 (0.503)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
73 74
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Galemys pyrenaicus GpyrGS06
l
F:GGGAAAGACCACTATCTGGG
R:TCATCATTCCAGAGCTGCCT
(ATAG)6 191–199 38 3 0.08 (0.08)
Galemys pyrenaicus GpyrGS07
l
F:GAACCACAAACTGAGGGTTCA
R:CCAGCTCATACTGTGTGGC
(CATC)7 194–198 38 2 0.06 (0.06)
Galemys pyrenaicus GpyrGS10
l
F:CACAGCAAGGTCTTAATGAAATAGA
R:GTATCATTTTCTCTGTAAATCCAACTC
(CATC)14 234–246 38 4 0.25 (0.34)
Galemys pyrenaicus GpyrGS11
l
F:CCTGAGGCTCATTCTACTTGC
R:AACCTAAAGTAGAGTAACTG
(CATC)16 198–206 38 3 0.16 (0.20)
Galemys pyrenaicus GpyrGS12
l
F:GTAGCCCACTAGTTGTTGAATG
R:GAAATCCCTGAGGTCAGTAACC
(CATC)7 217–221 38 2 0.05 (0.10)
Galemys pyrenaicus GpyrGS13
l
F:TCTCACACTAACATCCCACTTGA
R:TTCATAAAGTCAATTTAATGC
(CATC)10 174–178 38 2 0.05* (0.19)
Galemys pyrenaicus GpyrGS18
l
F:TTGGGACTGTTATTATTGC
R:TACGGCGGGTGAAATAAGTC
(CATC)15 243–251 38 3 0.13 (0.12)
Galemys pyrenaicus GpyrGS20
l
F:CCTGATGCTGACTTTTGTGC
R:AAGGATCAGACCAAACTCCA
(TCTA)15 219–231 38 4 0.42 (0.54)
Galemys pyrenaicus GpyrGS22
l
F:TGCTTCCTTGTTTTCCCTTC
R:TCAAGGATGGTGCATTTCTGAC
(TCTA)14 208–224 38 5 0.41* (0.56)
Galemys pyrenaicus GpyrGS23
l
F:TTAAGTATATGTACACCCTC
R:TGGCATCTGGTACATAGTAGTTGTT
(TCTA)14 195–211 38 5 0.37 (0.50)
Galemys pyrenaicus GpyrGS30
l
F:GTGTATTAATGTGAATTTGG
R:ACACCCATTCATCTGTTC
(TGGA)16 186–194 38 3 0.09* (0.18)
Galemys pyrenaicus GpyrGS32
l
F:GGTAATAATAGCTCTAAATGCAG
R:TTATTTGCCTCAAGGTCAC
(TGGA)14 189–207 38 5 0.22* (0.60)
Galemys pyrenaicus GpyrGS33
l
F:GGTAGTCAAGGAATTCTCTGCTGT
R:TGCATGTTCCCCCAACTCTA
(GGAT)16 230–238 38 3 0.28* (0.45)
Galemys pyrenaicus GpyrGS34
l
F:CATCATATTTTCTGTGCCTGGA
R:CCTTCTACTCTAGTGATTCAC
(TGGA)16 193–205 38 4 0.33 (0.43)
Galemys pyrenaicus GpyrGS41
l
F:GCAAACCAAGAAGTTATGCCA
R:CAACTTATTTGTTAATGATTTTATCCC
(AG)13 106–112 38 3 0.09 (0.08)
Galemys pyrenaicus GpyrGS46
l
F:GCTCTACACTCTACACGCAG
R:CCTTGACATGAGTATGGGTTCC
(AC)11 186–188 38 2 0.05 (0.05)
Galemys pyrenaicus GpyrGS47
l
F:AGAGTTCTCTAGCATCACCAGG
R:GATCTGGAGGGTTGGGGC
(AC)11 137–143 38 3 0.11 (0.10)
Galemys pyrenaicus GpyrGS53
l
F:TTAGAGAAACTGCATGGGCC
R:TCTTCACATTGTCTGCATCAAC
(CA)10 146–148 38 2 0.09 (0.08)
Galemys pyrenaicus GpyrGS55
l
F:CAAGAACCAAGTGTCTTGCC
R:GTCTGGAGATTCACCCATGC
(AC)10 164–166 38 2 0.03* (0.08)
Galemys pyrenaicus GpyrGS74
l
F:CATAAAGTAGAACTCGTCCT
R:AGGTATGAGTTCTAAGGACC
(CA)15 138–140 38 2 0.05* (0.15)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
75 76
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Galemys pyrenaicus GpyrGS75
l
F:GGTAGAGACTCATCTGAAGGGC
R:TTGTGCCTCCAAATGTTAGC
(CA)10 152–154 38 2 0.08 (0.08)
Galemys pyrenaicus GpyrGS80
l
F:TGATAAGTCAGAATGTGGGG
R:TTTACCTTGACGATCCCTGC
(CA)12 127–129 38 2 0.11 (0.10)
Galemys pyrenaicus GpyrGS82
l
F:CACTATTAGACCAGAAAGCG
R:CAGAGTGTGGCTTACCATTCC
(AC)18 172–174 38 2 0.22* (0.50)
Galemys pyrenaicus GpyrGS94
l
F:AGTTTTGCATAATTAAGCTG
R:GGAGGATGAGCAGTGTATGG
(AC)10 128–132 38 3 0.08 (0.08)
Epinephelus coioides Eco_M2_01
m
F:GTTGGTCATTGGTTTCCCTGAG
R:CCTGCCATCCCCATTGCTT
(AC)
26
305–363 30 15 0.933 (0.919)
Epinephelus coioides Eco_M2_02
m
F:GCATCGGCACCTTCATCTTACC
R:CACAGAAGCAAAACAAGTGGCATTA
(TG)
10
278–316 30 10 0.800 (0.839)
Epinephelus coioides Eco_M2_03
m
F:CAATGTCCAAGTTCTCCATCCAA
R:ACTAATACCTAAACCTAGCCGCTGT
(AC)
15
155–201 30 17 0.900 (0.931)
Epinephelus coioides Eco_M2_04
m
F:GTGCTTTCAGTGGCAACAATCC
R:ACAAATCCCTGTCTTCCTGGTCT
(TA)
11
(TG)
12
150–204 30 12 0.467* (0.823)
Epinephelus coioides Eco_M2_05
m
F:GGATGGGAGGGGCACAGATA
R:GCAGAAAGGGACATAATGAGGAGA
(TA)
10
295–339 30 6 0.567 (0.715)
Epinephelus coioides Eco_M2_06
m
F:TTTTCACCAGGAACTTTATGCTCTAC
R:TCTGAAATTGTATCCGCCCATC
(AT)
11
225–257 30 9 0.433* (0.827)
Epinephelus coioides Eco_M2_07
m
F:GTATTATGTGGGAGGATAGAGTCGG
R:GGACCAGAAGAGGTAATAATGAGGG
(TG)
14
175–231 30 17 0.900 (0.919)
Epinephelus coioides Eco_M2_08
m
F:GAGTGCCAAAGACTGGGTAGAAA
R:CATAGCTGATAGTAGGGTAAGCGAAT
(TA)
15
CAG(TA)
4
193–261 30 8 0.467* (0.716)
Epinephelus coioides Eco_M2_09
m
F:GAACCAGCCAGTTTCTTCCAGC
R:CCACCATCAGCACCATCCAAC
(TG)
7
(AC)
8
G(CA)
13
T(AC)
4
282–384 30 14 0.767* (0.910)
Epinephelus coioides Eco_M2_10
m
F:CAGTGAGGACGAGGTTTGGATG
R:CAGGGGAGTGATCTTAGGCAGT
(AT)
3
AA(AT)
11
375–399 30 7 0.833 (0.818)
Epinephelus coioides Eco_M2_11
m
F:AAAGTGGCTCGCAGAAAAGAAA
R:TGTAACTGTCCGCTGAACTCCC
(TG)
10
189–215 30 6 0.700 (0.764)
Epinephelus coioides Eco_M2_12
m
F:CACCTGTGGCCTGTCTGATTAA
R:TATGTAGGGAGGGACTTTTGTTGA
(GT)
8
GG(GT)
10
(GA)
10
C(AG)
4
200–236 30 9 0.833 (0.892)
Epinephelus coioides Eco_M2_13
m
F:AGTTGTCGTCTTCCGAGGTGG
R:CTTTGCCCCGCAGTGAGTAG
(AC)
4
AT(AC)
25
(TG)
11
434–494 30 11 0.967 (0.893)
Epinephelus coioides Eco_M2_14
m
F:ACTGGCACCTGGATGCTCAC
R:TGCATTATCCTACTTGGCTAAACAC
(AT)
10
245–291 30 14 0.833 (0.920)
Epinephelus coioides Eco_M2_15
m
F:ACACCTTTGGATTGGCTACCG
R:ACCTTTCTGTGCTCCTTTACGC
(AC)
15
GC(AC)
5
375–427 30 14 0.933 (0.931)
Epinephelus coioides Eco_M2_16
m
F:CACATACATCATTTCGTTCACCATC
R:GTCAGTTCAAGTCTGCCCGTTT
(CA)
19
255–297 30 13 0.833 (0.910)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
77 78
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Epinephelus coioides Eco_M2_17
m
F:ACTTCTCAACCTCGACAGTCATCA
R:CGACATCTCCGCCTAAACCA
(TA)
10
375–429 30 14 0.767 (0.858)
Epinephelus coioides Eco_M2_18
m
F:GGTCGGTTGGGGTTGGTTGT
R:GCTTCCTCCTGCTCCTTTTCG
(AC)
12
AT(AC)
5
349–375 30 9 0.833 (0.856)
Epinephelus coioides Eco_M2_19
m
F:TTTCCGTGGAGATTGTTGGTG
R:CAGTGTTGCCGTAAGATGTTGAG
(TG)
14
194–220 30 7 0.767 (0.763)
Epinephelus coioides Eco_M2_20
m
F:AGAAACCAGACCAGAGCCTCTATC
R:AATCAAACTGCTTATGCGTCCC
(CA)
16
(TG)
29
169–197 30 11 0.333* (0.893)
Epinephelus coioides Eco_M2_21
m
F:AAAACCTCCCGCTCTGCTTC
R:ACTGACTCTTCAATATGCCGTCC
(CT)
6
TAA(AC)
19
258–288 30 8 0.933 (0.856)
Epinephelus coioides Eco_M2_22
m
F:CCTCATCACCATCTGGCTCG
R:GTGGGATACAAAACACCCTTCAA
(TG)
19
308–356 30 11 0.667 (0.732)
Epinephelus coioides Eco_M2_23
m
F:CTCTGATTGGCTTTTCTGAGTGATG
R:TGGGTTGGCTGCCTTTGCT
(AT)
10
266–290 30 6 0.567 (0.719)
Epinephelus coioides Eco_M2_24
m
F:CCTCCATCAGTCAGAGTTGGTTAGT
R:TGTTGTCATCAAAAGCACCTTCC
(AT)
11
247–277 30 10 0.767* (0.848)
Epinephelus coioides Eco_M2_25
m
F:GTTTCTGCTCCGTCGTCGTG
R:GTTTCATGCTGTCCAGGTACTCC
(TG)
27
270–306 30 12 0.900 (0.886)
Epinephelus coioides Eco_M2_26
m
F:CTGAGAAGAAGGAAAGGGGACC
R:CGTACAAGCATGTTGGGGAGA
(TA)
19
152–176 30 11 0.833 (0.860)
Epinephelus coioides Eco_M2_27
m
F:TTATCAAGGTTTCCTATTCCCAGTG
R:TGGTTTGCCTTCAGCATTTAGAC
(GT)
15
(GT)
11
367–417 30 10 0.800 (0.894)
Plectropomus leopardus Ple_Trs_01
n
F:CAGCTGGATCATTATCTGATCTCC
R:TTCAGGTGCAGGAGAAAGGG
(TG)
13
151–181 30 11 0.933 (0.899)
Plectropomus leopardus Ple_Trs_02
n
F:TGGTTTATATCCACAGCCCG
R:TGCCTCCTGAACACACACG
(GT)
18
172–204 30 8 0.931 (0.842)
Plectropomus leopardus Ple_Trs_03
n
F:GGGCGAACGAGTGTTTATCC
R:TTTGGGGTCTGTGATTCGC
(GT)
14
155–205 30 8 0.700* (0.843)
Plectropomus leopardus Ple_Trs_04
n
F:ATTACTGAGCTGGCATGGGG
R:CCAGCACTAATAGCATAAGTGACCC
(AC)
2
AA(AC)
6
(CG)
2
(AC)
15
154–196 30 7 0.800 (0.748)
Plectropomus leopardus Ple_Trs_05
n
F:GGTTTCCCAGCAGACATGC
R:TGTCTAGCTACAAACTGTACTCGTCG
(GT)
19
120–148 30 8 0.483 (0.485)
Plectropomus leopardus Ple_Trs_06
n
F:TGAGGAAAGCATTTCACAGCC
R:AAAAGACCACACGTAAACAGCG
(CA)
9
164–190 30 10 0.800 (0.750)
Plectropomus leopardus Ple_Trs_07
n
F:TGAGAGTCTGGAACCAGGGC
R:TTCATCAGGCTGCTCACAGG
(AC)
2
(TG)
5
(TA)
4
(TG)
3
G(TG)
6
155–217 30 10 0.367* (0.692)
Plectropomus leopardus Ple_Trs_08
n
F:GGAGTAAACCGTTGTGTGCG
R:TTGCTAATGGCCCTGTTTGG
(GT)
2
C(GT)
10
172–178 30 3 0.767 (0.593)
Plectropomus leopardus Ple_Trs_09
n
F:CGCTTAAAACCCGCTTTCC
R:AGCTGTTCTCTGGCCTGTCC
(GT)
15
138–158 30 9 0.926 (0.818)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
79 80
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Plectropomus leopardus Ple_Trs_10
n
F:GGGATATGTTCAAGGCAACG
R:GCTGACCCAGTTCAATAATCCC
(CA)
3
CG(CA)
6
CT(CA)
11
126–188 30 11 0.862 (0.820)
Plectropomus leopardus Ple_Trs_11
n
F:GAGGGGTTCAGTTCAGTCGG
R:ACGCTTGCACTCTGGTTAGC
(GT)
18
164–186 30 8 0.933 (0.853)
Plectropomus leopardus Ple_Trs_12
n
F:AGACAGGCACACACAGAGGC
R:CATTCATGGCTAATCAGTCGC
(TG)
10
126–152 30 9 1.000 (0.815)
Plectropomus leopardus Ple_Trs_13
n
F:GCTCAGGAGTGTGAAAGATGC
R:CTGCGTGTGGAGGTCAGC
(GT)
11
113–177 30 10 0.533 (0.819)
Plectropomus leopardus Ple_Trs_14
n
F:AGCTGGAAAAGGAGCAGAGG
R:CTGTGGTGAATGAACACATGC
(CA)
17
168–206 30 9 0.500* (0.757)
Plectropomus leopardus Ple_Trs_15
n
F:GCTGGCAACAGCAAACTGC
R:CTCCAGCATGCACATGATCC
(TG)
24
165–189 30 9 0.833 (0.753)
Plectropomus leopardus Ple_Trs_16
n
F:CCTACGACTGCTACGAGAGATACC
R:TCAACAGACAACAAGCTGCC
(CA)
18
127–147 30 7 0.800 (0.848)
Plectropomus leopardus Ple_Trs_17
n
F:GGGACGAGAGAAACACAGCG
R:CACAGCAGAGGTAGTTAGAGGGG
(GA)
15
(AGAC)
3
(TG)
7
136–190 30 11 0.867 (0.861)
Plectropomus leopardus Ple_Trs_18
n
F:GAGATGCTTTGGCAAGAACTGT
R:ATAGTCCAATGAGGCCAGAAAC
(GA)
39
93–126 30 12 0.165 (0.835)
Plectropomus leopardus Ple_Trs_19
n
F:AAACCCAACAGTTTGTACTGCAT
R:CTCTCCGTGTGCGTAAAAATAAT
(CTAT)
15
116–147 30 10 0.126 (0.874)
Plectropomus leopardus Ple_Trs_20
n
F:AGAGGTTGTCAGTGGGTCTCAG
R:GCTGCCTCTTTAGCAAGATTTTT
(AGA)
13
100–139 30 9 0.118 (0.882)
Plectropomus leopardus Ple_Trs_21
n
F:GACTTGTTCCTCCCGTCCTAC
R:AGGGCTTTAGCCAGGGAGAG
(GGA)
13
110–126 30 4 0.243 (0.757)
Plectropomus leopardus Ple_Trs_22
n
F:TTTTCTCTTGACCTTTACCCCTC
R:AATAAAAACAGGCATGAAGTGGA
(CTCTC)
8
110–135 30 8 0.141 (0.859)
Plectropomus leopardus Ple_Trs_23
n
F:TTCTCTTGACCTTTACCCCTCTC
R:GAGGGAGGAGGAGAATAAAAACA
(CTCTC)
8
115–143 30 6 0.172 (0.828)
Plectropomus leopardus Ple_Trs_24
n
F:ACGAGGAAGGATCTAATCCAGAC
R:CTGCAGGTGTCTCTCATATGTCTT
(TCTGG)
5
144–160 30 6 0.198 (0.802)
Passerina ciris Pb16
o
F:TCACAATGGCACACGAAGC
R:TGCAGACTTCAGGGACGTG
(GTTT)6 275 63 13 0.875 (0.975)
Passerina ciris Pb14
o
F:ATATTCCATGTTCTGATTAGTACCC
R:ACTGAGAAACCTGGTCTAGTGG
(ACAT)4 165 63 3 0.666 (0.485)
Passerina ciris Pb2
o
F:ACCAGGTGATTCTGGTCTTC
R:TGTTGCTTCAGCCCTTTGG
(GGTT)5 235 63 11 0.794 (0.767)
Passerina ciris Pb11
o
F:GGGCTGAGACCTGCTTGG
R:CCCAAACCATTGCCTGTGC
(GGAT)6 193 63 32 0.953 (0.955)
Passerina ciris Pb8
o
F:CAGCCCAAATGTTGGTTTGAC
R:GCACACCAATGGGAGCATAC
(AAAT)6 219 63 9 0.418 (0.508)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
81 82
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Passerina ciris Pb4
o
F:GGATAGGGTCTTCAAGCACAG
R:TGCCTGCTTATGTTATGGGC
(AGAT)5 151 63 14 0.813 (0.809)
Passerina ciris Pb7
o
F:GGCTGAGTTTGGGCTATGG
R:ACATGTGAGACATCACTAAAGGAG
(CTTT)5 256 63 19 0.697 (0.816)
Passerina ciris Pb15
o
F:AGGATTGATGCGTTAGGCTTG
R:GGTCCTGGGCTCACCTTC
(AAAT)5 207 63 4 1.00 (0.716)
Passerina ciris Pb9
o
F:GTGTTGAGAGCCTGATGCC
R:TCCAGGAGTGTGCCTAACATC
(AATG)14 161 63 21 0.767 (0.918)
Passerina ciris Pb12
o
F:CACAGCTCGGTGTCATTGG
R:ACAAACTCCTTAATAGCTGAGGC
(AATC)7 214 63 7 0.534 (0.707)
Passerina ciris Pb5
o
F:TGAGCATGGATCTGCCTAC
R:GGAGAGGAGGGACTTGTGG
(GGAT)5 252 63 20 0.883 (0.849)
Passerina ciris Pb3
o
F:TGAAGTACACATCTGACTCATGG
R:GAGCTCTAAAGTCATGATTAATGCAAC
(AAAC)5 325 63 23 0.953 (0.949)
Passerina ciris Pb17
o
F:GCACAGGTCCATACTGAGAAC
R:TTTCTTTGCAGATGTGAAGGG
(CCTT)4 177 63 2 1.000 (0.600)
Passerina ciris Pb13
o
F:CCGCAATAAGGAGGTGGAAAC
R:ACCTCTGAGCAATTTCTGTAGC
(CCTT)4 190 63 15 0.744 (0.817)
Passerina ciris Pb10
o
F:GCAGTTCAGTTCCATCTGGC
R:TGCAACGTGGCTTTATTTGC
(AAAT)6 238 63 9 0.395 (0.566)
Passerina ciris Pb6
o
F:TCAGAATTACCTGGTGCTCCC
R:ACAGAGCCATTGGTCCAGC
(GAGT)6 207 63 14 0.627 (0.825)
Passerina ciris Pb1
o
F:ATCGATGCAATGGCTGCAC
R:CGTGCCTCAGTTTCCCATC
(CCCT)5 242 63 9 0.674 (0.665)
Passerina ciris Pb19
o
F:CAGCGTTATTGGGTCCATTTAT
R:GTCAACAGAGGATGGGTGATCT
(AC)12 186 63 17 1.000 (0.911)
Passerina ciris Pb18
o
F:CTTCCTCCCACAAAATCAATTC
R:TCCTATGGCTTCTTCTTGTTGA
(AC)15 150 63 11 0.900 (0.830)
Passerina ciris Pb20
o
F:AGAAACATCAGCAGACAGGAGA
R:GGAGCACACAAGATTACATCCA
(AT)10 349 63 18 0.850 (0.896)
Brycon orbignyanus Borb01
p
F:TCTGTCTATCTATCTGCCTATCTGTTGA
R:AGGAGGCATAGTGGTAGCATGTAG
ATCT 100–135 46 8 0.435* (0.826)
Brycon orbignyanus Borb04
p
F:TTGTGAACTATGATTCCAACTGTATGTC
R:GGCCTCATAACCCTTTCCTAACTT
ATAG 118–123 48 2 0.208 (0.219)
Brycon orbignyanus Borb06
p
F:AGGTGGGTCTTCAATTATTAGCAA
R:GCAACAATAAACACAACAATAATGCTAC
ATT 110–137 49 6 0.612* (0.812)
Brycon orbignyanus Borb07
p
F:TCAGTGCTCTGTGTGCATTTTTATT
R:AAGGAAGTTTAATGTTGCCAAACG
ATA 142–152 49 5 0.163* (0.716)
Brycon orbignyanus Borb08
p
F:AGGAAGCGGAGAAATGTGTATTGA
R:GGGAACATGATAAAAGTGCTGCAT
ATT 114–140 49 8 0.633* (0.792)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
83 84
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Brycon orbignyanus Borb09
p
F:TTTAACTCCTTCAGTCTGCACAGC
R:GTGCGCCTACAAATAAACAGAACA
AAT 126–144 49 5 0.694 (0.717)
Brycon orbignyanus Borb11
p
F:TCACCAACCAACAGAAAACACAAT
R:CATCTGAGGCCTGTTTGGTCTTAT
ATT 147–178 48 8 0.688* (0.806)
Brycon orbignyanus Borb12
p
F:CAGATGTTATTACACGTTTTGTTGCAC
R:TGTGAGTGTTTGTGAGTGTTTGTGA
ATT 118–161 48 8 0.625 (0.836)
Brycon orbignyanus Borb13
p
F:ACATATGGTCATATTGCCCACACC
R:TGCTCCAACATAATACACAAAATGATG
ATT 103–137 49 7 0.551* (0.720)
Brycon orbignyanus Borb14
p
F:TCCCAAAATAATGACTCAGCAGAA
R:TAGCCTCTCTCACAGAACAATGGA
ATC 116–154 49 7 0.694 (0.766)
Brycon orbignyanus Borb15
p
F:CGTAGCCTCATTGTGTAGCATAGC
R:GCCATCACTACAGTCTTTTAACCCA
ATT 147–179 41 9 0.390* (0.865)
Brycon orbignyanus Borb16
p
F:GCACGAACCAATACTAGGAAATGC
R:TGTAACAAAGAAACACACTGTCAGCTC
AAT 124–172 48 8 0.521 (0.681)
Brycon orbignyanus Borb17
p
F:TCAAAAAGCAAAAAGTTTAAAACATGC
R:ATGTGGAATAAAGGGCAAGACAAA
ATA 131–151 49 6 0.612 (0.788)
Brycon orbignyanus Borb18
p
F:AAAGGCACAGTAGCAAAAGTCTGTTTA
R:AACGTCTCGTGAGTGTCATCTGAG
ATT 142–175 48 7 0.500* (0.786)
Brycon orbignyanus Borb21
p
F:AGAGGCGGAGAGGAGATCTAAGAA
R:GTTGCCAAGGAGACAGCAGAGT
CA 101–127 49 7 0.673* (0.761)
Brycon orbignyanus Borb24
p
F:GAAAGCTTACTGTTGGTCAGAGGG
R:GCTCCAGTAACTTGTACATTTGCG
AC 96–104 49 4 0.469 (0.542)
Brycon orbignyanus Borb25
p
F:CAGCAGTGATTGAGTAGTCATGGG
R:CCTGCTCTCCACAGAGGGTTATTA
AC 262–318 48 9 0.979 (0.817)
Brycon orbignyanus Borb28
p
F:CCCTCCTTTTCTTCCTTGCTTTAT
R:GCTTTTGATTACAGGAGCATGGAT
CA 123–141 49 4 0.306* (0.611)
Brycon orbignyanus Borb29
p
F:CACTGTATGCGGAGCAATTTACTG
R:TGTACACCTACAGTTGTGTTTGTGTTG
AC 112–128 49 6 0.551* (0.744)
Brycon orbignyanus Borb30
p
F:CACTGCATATGTCCAAACTGAACTT
R:GCTCTGTGTTCCAGACAGGATCT
CA 79–89 49 4 0.245* (0.737)
Brycon orbignyanus Borb33
p
F:CCAACCAGCTGAGTCAGTCAGTA
R:GCTCTATGGCTCTATGTTCTAACGC
AC 68–83 49 3 0.510 (0.532)
Brycon orbignyanus Borb34
p
F:AGCCCAACACAGCAACAGAAA
R:CTTTCAGCCCTACTCCCACG
AC 89–120 49 8 0.898 (0.830)
Brycon orbignyanus Borb35
p
R:GGGCGTTAAAACGTAAAACTCAGTC
F:CTTTACGTCTCTCACTCACTTGCG
AG 114–138 49 7 0.755 (0.820)
Brycon orbignyanus Borb36
p
F:GGAAAGAGAAAAGGGGAGAAGACA
R:CATGCCCTCTTTCTAGGTGAGTTC
AG 89–109 49 6 0.592* (0.785)
Brycon orbignyanus Borb38
p
F:ACTGACAGACAGAGCACTCACACTC
R:AAGTAGCTTGTCTGGTTGCAAAGG
CA 80–112 49 8 0.694 (0.810)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
85 86
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Brycon orbignyanus Borb39
p
F:CATAATCGCTCCAGTGCTTACTCA
R:TTAGAACAAATACGCTTGGCTCAAC
AC 94–101 48 2 0.292 (0.278)
Brycon orbignyanus Borb43
p
F:AGAGAAACGGCCCTTCAGGAT
R:AAGCTTTTCTCCAAACGTCCCTAT
AC 113–148 49 7 0.653 (0.778)
Brycon orbignyanus Borb44
p
F:CCAACAACGACTCCATTTACACAC
R:ATTCATGGATTCTCTTCTCCTCCC
AG 88–110 49 5 0.633 (0.687)
Brycon orbignyanus Borb46
p
F:ATGCGTAACCCTGATCTAGCAATG
R:TGTCAAAATGTGTGCCTTTCTATGTT
CA 121–131 49 3 0.224* (0.653)
Megalobrama amblycephala Me.AM_1
q
F:AGCGTGAGGATTCCAATT
R:AGAGGCAGAAACAACAGA
(AGAAG)5 210–275 90 7 0.8889 (0.8371)
Megalobrama amblycephala Me.AM_2
q
F:ACCTCGTTGGCGTAGC
R:CTCAAGCGCAGTATGG
(GATCA)5 200–222 90 5 0.3333 (0.7789)
Megalobrama amblycephala Me.AM_3
q
F:AGAGGCGGCCAAAATCAGAA
R:CCAACCAACCAACCAACCAA
(CTGA)5 200–225 90 3 0.9444 (0.6320)
Megalobrama amblycephala Me.AM_4
q
F:ACTAAGAGTGAACTACGCTA
R:TGAAAAATCAAAGAAAAAAT
(TCAT)5 187–213 90 4 0.9778 (0.6918)
Megalobrama amblycephala Me.AM_5
q
F:CCACTTTTTTTTATTTGA
R:CTTGTGCTGCTCTCTCTC
(TTCA)5 155–172 90 4 0.9333 (0.6995)
Megalobrama amblycephala Me.AM_6
q
F:TAAAATCAAAACAGACAA
R:ATAAAAACAAAACACACA
(TAAA)5 105–153 90 3 0.8764 (0.6647)
Megalobrama amblycephala Me.AM_7
q
F:CCAAAATGATTCAACAGCCT
R:TGTAACAGCACTTTCCCCTA
(TTTC)5 296–312 90 4 1.0000 (0.7444)
Megalobrama amblycephala Me.AM_8
q
F:TTAGCACAGAAGGGGAAG
R:TTGAAAGCATTTGAACAG
(ACAT)6 223–264 90 5 0.9874 (0.7675)
Megalobrama amblycephala Me.AM_9
q
F:ACAAGCCAAGTGTCCTCC
R:TTTCTTTCCAATGCAGCA
(GAAA)5 275–326 90 4 1.0000 (0.7515)
Megalobrama amblycephala Me.AM_10
q
F:TCTTGCTTTATTGGAACC
R:AACAACACACACATCTGC
(GGTT)5 267–289 90 4 0.7333 (0.7504)
Megalobrama amblycephala Me.AM_11
q
F:GGAGATGCTGGTTTGACTGG
R:AGATGGAGATGGACAAGGGG
(CCTT)5 212–275 90 5 0.9667 (0.7952)
Megalobrama amblycephala Me.AM_12
q
F:ACAGCAGCATAAAATCCAGGA
R:AGTCTTTGTTTGAGGCAGCA
(ATAC)5 194–267 90 7 1.0000 (0.8158)
Megalobrama amblycephala Me.AM_13
q
F:TCCCAATGATGTAGTGCAAGT
R:CCTGATGTCATCTAGCCAAAGG
(TAAA)5 185–234 90 4 0.3333 (0.5226)
Megalobrama amblycephala Me.AM_14
q
F:AGCATGTTTTCGGGAAGCTG
R:CATGGAAACGAGGCAGCTTT
(TGTT)5 157–184 90 4 0.2667 (0.5476)
Megalobrama amblycephala Me.AM_15
q
F:TGTGGATGCCCTGAGTGAA
R:AATGTGTTCGTGTGGAGAG
(CATT)5 175–200 90 3 0.7000 (0.5327)
Megalobrama amblycephala Me.AM_16
q
F:CAAAAGTGAAAGGGGCGGAT
R:AATCACAGTTGCCAGTCACA
(AATA)5 147–158 90 3 0.8000 (0.5492)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
87 88
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Megalobrama amblycephala Me.AM_17
q
F:AGGCGAAAGAAACACTGTGT
R:GGTGTTCGTGCGATGTTGTA
(TGGA)5 180–320 90 3 0.3000 (0.5949)
Megalobrama amblycephala Me.AM_18
q
F:CAGCATATCCCGATCCCAGT
R:GAGGCAGCGACGTTAGTTTC
(TC)6(CT)6 195–266 90 7 1.0000 (0.8158)
Megalobrama amblycephala Me.AM_19
q
F:AACTGCAGCCCACTCTATGT
R:GCTGTTCTTGTTGTGGCTGT
(ACC)5(AAC)5 185–225 90 3 1.0000 (0.5542)
Megalobrama amblycephala Me.AM_20
q
F:AACACAACAGAGCTGCCAAG
R:TCTCTTCAAGAACATGCGCC
(GT)7(GT)7 151–164 90 4 0.2667 (0.5746)
Megalobrama amblycephala Me.AM_21
q
F:ACCAACCACTTGTGAGGAGA
R:GGTTTGTCTGCTGGTCTTCC
(CT)8(CT)6 18–258 90 4 0.3333 (0.5226)
Megalobrama amblycephala Me.AM_22
q
F:TTCTGTGTGTGTTCGCGAG
R:AGGCACCAGACAAGGAGTT
(TG)6(GC)7 191–206 90 3 0.2667 (0.6119)
Megalobrama amblycephala Me.AM_23
q
F:TCGGATCTCTGTGCTGTGTT
R:GCCACTGGAACTGAGAGACT
(TC)8(CT)9 191–212 90 5 0.7000 (0.7079)
Megalobrama amblycephala Me.AM_24
q
F:CTGGTCGACGTTTAAGGTTCC
R:CTGATTGGCTGAAATGTCCGT
(AAC)5(AT)7 160–362 90 3 1.0000 (0.6215)
Megalobrama amblycephala Me.AM_25
q
F:ACGAGTCCAGACACACGAAT
R:ATTCCGAACCGAAGCAACAC
(ACA)5(GT)8 200–250 90 5 0.9667 (0.7079)
Megalobrama amblycephala Me.AM_26
q
F:CAGAAGGAACGAGGGGTCTG
R:CAGCAAGAAGAAGAGGCGAC
(GT)7(GT)6 214–224 90 3 0.1023 (0.5605)
Megalobrama amblycephala Me.AM_27
q
F:ACATTTGCCGTCTCGAAAGG
R:TCCTGGAAACTTGAGGGACG
(TC)6(CT)7 173–187 90 3 0.6000 (0.5712)
Megalobrama amblycephala Me.AM_28
q
F:AAAGAGGGAGAAACGAGCCA
R:TACGGCAGCGGAAATAAACG
(GT)6(GT)9 151–159 90 4 0.5000 (0.6537)
Megalobrama amblycephala Me.AM_29
q
F:GAAGCCACTTAACCCATGGC
*R:TGCCTCTGTAGTGTAGTTGCA
(CA)7(CA)10 183–217 90 6 0.3000 (0.6763)
Megalobrama amblycephala Me.AM_30
q
F:TAACTTGCTGTCACCGCTTG
R:TCTCCTAAGCCTTGCACACA
(TG)6(TGT)6(T)12 192–212 90 3 1.0000 (0.4249)
Megalobrama amblycephala Me.AM_31
q
F:ATGACAGCACAACACAGCAG
R:CACACACACACTCACTCGC
(AC)6(TCA)5 235–370 90 4 0.5567 (0.4209)
Megalobrama amblycephala Me.AM_32
q
F:TGTGTGTGTCTGTATGTGTCCT
R:TGGCCTTCTTCCTGTCTGAG
(CA)8(AT)6 220–245 90 5 0.1333 (0.6237)
Megalobrama amblycephala Me.AM_33
q
F:CTGCCTTCAAACACCCAACA
R:TGTTTGTCTGGTCATGCAGC
(AG)10(TG)6 200–247 90 5 0.1333 (0.6237)
Megalobrama amblycephala Me.AM_34
q
F:TCTGCGGTGCTGTTTGAA
R:GGCCCGAGACGATTATAA
(CT)8(AT)6 200–287 90 4 1.0000 (0.6797)
Megalobrama amblycephala Me.AM_35
q
F:GACGACTGAGGGGTTAGAGG
R:AGCGAGTGATGCCAGAAAAC
(AC)9(GT)7 123–212 90 6 0.7333 (0.7751)
Megalobrama amblycephala Me.AM_36
q
F:TCTCGATGGACACGTATGG
R:AGCATCTCTGGTTGTGGACA
(GT)9(GT)7 124–247 90 8 0.9667 (0.8271)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
89 90
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Enhydra lutris nereis EluA011w
r
F:TGCCCACTCTGTGTTTCTCTTA
R:TGTGTGTGGCATATGTGAGTGT
(CA)19 205–221 30 4 0.50 (0.64)
Enhydra lutris nereis EluA109w
r
F:GCGTCCCGACTCTGGTATTT
R:AGACAGAGAAGGGAAAGGAGGA
(CA)8.5G(CA)13.5 235–249 30 3 0.53 (0.48)
Enhydra lutris nereis EluA202w
r
F:GAGAGACAGGCAGAGCAAGTTT
R:GAAGTGTCAAGAAGGAGCTGGT
(AC)26.5 252–280 30 5 0.50 (0.57)
Enhydra lutris nereis EluA309w
r
F:GGCCTCCTCTCCAGGTTATATT
R:ACAAGCAGTTCTCCCTCTCATC
(AC)18.5 206–214 30 4 0.43 (0.37)
Enhydra lutris nereis EluA312w
r
F:GCAGCGACACAGACACAATTA
R:AATGGAACGGGAAAGTTCTG
(TG)20.5 237–241 30 3 0.57 (0.58)
Enhydra lutris nereis EluA314w
r
F:AGCCCAAGTGTCTATCCCAGAT
R:CCCTAGATCCATCTATGTTGTTGC
(CA)21 149–163 30 3 0.57 (0.50)
Enhydra lutris nereis EluA315w
r
F:AAGAAGGCAGCAAATACCTCTG
R:CCTGAACTCAGCCCTATGTTTC
(GT)25A(TG)5.5 195–215 30 4 0.63 (0.69)
Enhydra lutris nereis EluA316w
r
F:AAATCCGTAAGGGTGAAGCA
R:ATTAACCACGTCGCCTCTGTAT
(GA)16(GT)12 204–210 30 3 0.57 (0.51)
Enhydra lutris nereis EluA318w
r
F:CGTCTGGGCTAGTCACCTCTAA
R:AGGCTAAGCTGCTGTGTGAAAG
Enhydra lutris nereis EluA324w
r
F:GAGACCTCTCTCTGAGCCATCA
R:CTCACCTCATGCCATCTCCTAT
(AC)16.5 242–246 30 3 0.53 (0.50)
Enhydra lutris nereis EluA325w
r
F:CACGAACGAAGACGTGACTAAG (AC)22 156–172 30 4 0.63 (0.65)
Enhydra lutris nereis EluB110w
r
F:TCAGGTGTGTATGGAGATGAGTG
R:GAGCCTTCCAGAGAGAATGAGA
(TC)20 160–170 30 4 0.80 (0.72)
Enhydra lutris nereis EluB118w
r
F:GTCCAAACCAGAACCAGAGC
R:ATTATAGGCTGCCCAGTTACCA
(TC)13.5 231–233 30 2 0.13 (0.12)
Enhydra lutris nereis EluB122w
r
F:ACCTGATGTAAAGGGTGAGTGG
R:GCTCTGAATTAGCTCGGTAGGA
(TG)15(AG)18 206–210 30 3 0.63 (0.62)
Enhydra lutris nereis EluB302w
r
F:CTCAGACTCACCTGTTGCTCAC
R:AGGAGGCTGGAGTGTTTGTTTA
(AG)17(TG)16.5 219–227 30 3 0.37 (0.31)
Enhydra lutris nereis EluB312w
r
F:CGCAGCTTACCATATAACCAAG
R:CCTTGAATGTGACTGCTCAAGT
(AG)16.5 160–168 30 5 0.53 (0.55)
Enhydra lutris nereis EluB313w
r
F:CAACAACTGATTCTGGCTGAGA
R:CTCAGGTCATGATCCCAGAGTT
(GA)16 278–282 30 2 0.23 (0.30)
Enhydra lutris nereis EluB317w
r
F:GCTGCCTCACCCAAATATAGAC
R:GGTGTCGATGCTGAAAGAGTAA
(TC)17 243–251 30 3 0.47 (0.45)
Enhydra lutris nereis EluB326w
r
F:TTCTCTTCCTGTGACCCTCATT
R:GCAAGAGTATGCAGATGTGAGG
(TC)13.5 235–245 30 3 0.57 (0.52)
Enhydra lutris nereis EluD011w
r
F:TACATAGGCGGTCTCCTTCTTC
R:CCTGCTTGTGATCTCTGTCTGT
(TTTC)5.5(TCTA)7.25(TTAT)2.5 236–264 30 7 0.70 (0.78)
Enhydra lutris nereis EluD119w
r
F:AGCCAGTAGGAGATGAAAGCAG
R:GAGTAACACCTGGGCCTCTCTA
(GATA)10.5 232–240 30 3 0.47 (0.59)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
91 92
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Enhydra lutris nereis EluD219w
r
F:TACTTGGATTTCTCGCTCTCCT
R:ACGTTTCATCCACCTGTCTCTT
(ATCT)11 178–186 30 3 0.47 (0.59)
Enhydra lutris nereis EluD311w
r
F:GTCACATGCATTCTTCCCAGT
R:CTCAGGGTCATGAGATCTAGCC
(TCTA)9.5 171–179 30 2 0.40 (0.49)
Enhydra lutris nereis EluD320w
r
F:TCCCACTCAGGCTTATAAATGG
R:TCTGCTTGGAACATGTTTGG
(ATAG)13.75 200–212 30 4 0.70 (0.66)
Takifugu fasciatus TF9
s
KT768017
F:AGGACAGAGGCAACCCTTTT
R:AGGCTCAGATGCGTTTAGGA
(CT)9 284–294 32 5 0.750 (0.698)
Takifugu fasciatus TF 10
s
KT768018
F:TCTCCGGGTGTGATTTAAGG
R:CTCGGCCAATGGAAAATAAA
(AC)8 262–276 32 6 0.469 (0.800)
Takifugu fasciatus TF 11
s
KT768019
F:GAAGCAGCTCTTATCTCCGTG
R:CATGCCAGATCAACCATCAG
(AT)8 214–226 32 4 0.563 (0.586)
Takifugu fasciatus TF 21
s
KT768020
F:AGCCAACCTTGGAGGAAAAT
R:TAAATGTGCGACACGAGAGC
(AG)8 270–274 32 3 0.406 (0.431)
Takifugu fasciatus TF 31
s
KT768021
F:AGGTGGACAGTGTGCATTGA
R:CGAGGAATCTGAAAAGCTCG
(TG)8 282–284 32 2 0.219 (0.329)
Takifugu fasciatus TF 34
s
KT768022
F:AGCTCGGAAAATACAGCTCG
R:CCTTCTGAAACAGGAGGACG
(AC)9 258–264 32 4 0.594 (0.695)
Takifugu fasciatus TF 35
s
KT768023
F:AGGTTTTTGGAGGACCAAGC
R:GCGGCTAGTCTCAGGTTTGA
(GT)9 284–290 32 4 0.313 (0.305)
Takifugu fasciatus TF 41
s
KT768024
F:CACACGTCTGTGGAGGATTG
R:CCATCCCACAGGAAGAAAAA
(CTT)5 270–275 32 4 0.531 (0.617)
Takifugu fasciatus TF 57
s
KT768025
F:AGGCAGAGTGCACGGATCTA
R:ACTAGAGGGCAGTGTTGCGT
(AAT)5 255–267 32 4 0.625 (0.607)
Takifugu fasciatus TF 58
s
KT768026
F:GATGAGACTCCTGCGAGACC
R:ACAGTCGAGGCATCTGACAA
(ATT)5 261–273 32 4 0.219 (0.282)
Takifugu fasciatus TF 63
s
KT768027
F:CATCAACGCCTTCCAATAGC
R:CTGACCCATATCGGTTGCTT
(TCA)6 211–217 32 2 0.250 (0.268)
Takifugu fasciatus TF 78
s
KT768028
F:AGACTAACCCTGCTGCTGGA
R:CAAGCTAAAGGAGAGCACGG
(TCT)5 240–243 32 2 0.406 (0.424)
Takifugu fasciatus TF 87
s
KT768029
F:CGCAGGAAGACACCTTTCTC
R:TGAAGACGTTAACCTTCGGG
(AGG)5 286–289 32 2 0.156 (0.289)
Takifugu fasciatus TF 91
s
KT768030
F:AACAGCATCCTCACGAAACC
R:CACATTTATCACGCCAGGTG
(CCA)5 287–293 32 2 0.313 (0.268)
Takifugu fasciatus TF 92
s
KT768031
F:AGACTCAAACAAGGAGCCCA
R:ACATTGCGCTGTAGGAAACC
(TAT)5 292–298 32 3 0.500 (0.520)
Takifugu fasciatus TF 96
s
KT768032
F:TTCCCATCCATCAGTTTTCC
R:TGGGGTCATTAAAAACCTGG
(TAA)5 251–257 32 3 0.281 (0.294)
Takifugu fasciatus TF 98
s
KT768033
F:GGAGGCTCTGATGACTGAGG
R:CATCAACCACAACAATCCCA
(TGT)5 243–246 32 2 0.531 (0.396)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
93 94
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Takifugu fasciatus TF 99
s
KT768034
F:CGGCTGAAATGTTTAACGGT
R:TGACCTGGCAGTTTCTGGAT
(TTC)7 259–262 32 2 0.313 (0.381)
Takifugu fasciatus TF 101
s
KT768035
F:CACACAACGCTCAGTCCCTA
R:CCGGCTTCAGAGAAACTGTC
(TAA)6 247–262 32 5 0.688 (0.612)
Takifugu fasciatus TF 110
s
KT768036
F:TGGCATTCAACTGGTGTCTC
R:TACTTGGCGGAATTTTGGAC
(GAAA)6 289–297 32 3 0.625 (0.598)
Takifugu fasciatus TF 113
s
KT768037
F:ACGTACATGGTCGAGGAAGC
R:GGAAGATCAAACACCTCCCA
(GGAC)5 237–250 32 5 0.750 (0.691)
Takifugu fasciatus TF 115
s
KT768038
F:TGTCAGGGAGACAAAGGACC
R:AAACAAACAAATTCGGGTGC
(CGCA)5 256–268 32 3 0.625 (0.446)
Takifugu fasciatus TF 117
s
KT768039
F:CCGCGTTCCTGTCTACTGTT
R:CTGAGCTCCGAACTTTGTCC
(CACG)5 251–259 32 5 0.594 (0.560)
Takifugu fasciatus TF 118
s
KT768040
F:GGCAAAGCACACCCAATAAT
R:TTCTCCGTCCATTCTCATCC
(AATC)5 226–234 32 2 0.250 (0.310)
Takifugu fasciatus TF 120
s
KT768041
F:GAAGCACCATCTGCATTTCA
R:TGTCATTATGGCCACAGCAG
(GTGC)5 266–283 32 6 0.156 (0.589)
Takifugu fasciatus TF 121
s
KT768042
F:AGCGAGCTGTCTGAAGGAAG
R:CCCCACCCCTTTTCTCTCTA
(AAAC)6 217–225 32 3 0.594 (0.599)
Takifugu fasciatus TF 123
s
KT768043
F:GCTGAGATCCACTGGGAGTC
R:GCCTTACGTATCTTCCAGCG
(ATTT)5 235–247 32 4 0.188 (0.348)
Takifugu fasciatus TF 124
s
KT768044
F:GAGGAAGCTGAGCAGACAGG
R:TGCATGCAGCTGTAAACACA
(TAAA)5 261–265 32 2 0.469 (0.504)
Takifugu fasciatus TF 126
s
KT768045
F:GTGAACGGTTTCAGTGGGAT
R:CAGGCCACCAAGGTACAGAT
(GAAA)5 261–265 32 2 0.406 (0.496)
Takifugu fasciatus TF 130
s
KT768046
F:GTCTGGGTCTGGCTGATTGT
R:TTGTGAGGAGCAGAGGTGTG
(CTGC)5 257–261 32 2 0.219 (0.365)
Takifugu fasciatus TF 132
s
KT768047
F:CTGAGACATTTGCTCACCGA
R:TGCCTGATGGCAACTAATGA
(TAAA)5 257–261 32 2 0.813 (0.490)
Takifugu fasciatus TF 136
s
KT768048
F:CGTCCATTGTCCTCATTGTG
R:AGACCCCCGCAAATAAAAAC
(TCAT)5 221–225 32 2 0.219 (0.329)
Takifugu fasciatus TF 139
s
KT768049
F:GAGGAGATGACAAAGCAGCC
R:GGTCTCACCGAGTGGTTGAT
(ATTT)5 294–298 32 2 0.188 (0.268)
Takifugu fasciatus TF 143
s
KT768050
F:TTGTAGCGCCTTGGAGAAGT
R:ATTCCTCAGCGGAGAACAGA
(GTTT)5 240–244 32 2 0.219 (0.329)
Takifugu fasciatus TF 144
s
KT768051
F:AGAAAATGAGCCCAGCTTGA
R:GGACAGTTTCTGCAGGCTTC
(AAGG)5 221–229 32 3 0.313 (0.372)
Takifugu fasciatus TF 165
s
KT768052
F:TGTGTGGGGAGGTGTATCCT
R:CGCGCACTGTACAACAGACT
(GT)7cctagtgtgtgtgtgggggct
gtatcctagagtgttgtaca
(GT)6tggtgtgtgtatcttag
gttgctgtacagtgtgttg
tac(TG)6
224–235 32 3 0.656 (0.585)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
95 96
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Takifugu fasciatus TF 166
s
KT768053
F:CCTGCCCATTCCTAACACTT
R:TGATATGTGAGAGACCCCCA
(AGAC)5ttgactgacatctgaaa
gcatctttcaggttatcatatgg
cttgcttaagccctgttgtaag
atatactaaaataataataacg
gtg(ATA)6
224–227 32 2 0.250 (0.222)
Takifugu fasciatus TF 169
s
KT768054
F:TTTTGTTTGAGGAGCAGCCT
R:CAAAGAGGAAGTGGTTTAACGG
(GCT)5gggccttatcccaaggggctga
catagctgacattcaacagataac
aaacacacacagacactcac
acacgt(AC)6
276–278 32 2 0.250 (0.222)
Takifugu fasciatus TF 158
s
KT768055
F:TTCCTAAAAGAGCCTTGCCA
R:CTTGCAGCAAAGCTGTAGCA
(AT)6(GT)6t(TA)8caca
catacatacatgta
taaatacacacatgtgtgtat
atgtatgtggat(AC)6
291–301 32 5 0.656 (0.665)
Takifugu fasciatus TF 172
s
KT768056
F:TCCTCCACAGGAGCTTGAAT
R:TGACGGATATGAGGAGGAGG
(CT)7ccgtctctg(TC)6 255–269 32 6 0.719 (0.715)
Takifugu fasciatus TF 173
s
KT768057
F:TTCAGAATGACAGCAGCAGG
R:CCCCTTCATCTAAGGTGCTG
(TAA)5tagtag(TAA)5 283–286 32 2 0.281 (0.329)
Takifugu fasciatus TF 184
s
KT768058
F:GGATCACGCAGATCACACAC
R:TGGGACTAATCCGCACTTTT
(CA)6cgt(AC)6 259–263 32 3 0.594 (0.573)
Takifugu fasciatus TF 186
s
KT768059
F:CAGACGGGTGAAGAGAGGAG
R:TCCTGGTCCCTCAGTTTCTG
(AC)8atacgcacg(CA)6 219–221 32 3 0.125 (0.404)
Hippocampus erectus Hier-SSR1
t
F:ATGGAAGAGTCAACATAAACC
R:TGAGTCACTACGGCAACC
(AC)
8
161–169 32 5 0.6667 (0.7606)
Hippocampus erectus Hier-SSR2
t
F:TCTGGGGCTCCGACTAAAC
R:GTAAACTGGAAACGCCTCAA
(ATT)
6
224–236 32 4 0.6667 (0.7289)
Hippocampus erectus Hier-SSR3
t
F:ACCTGCTACCAACCACAA
R:AACAAGGCAACCACTCATT
(GT)
8
271–285 32 5 0.6333 (0.8072)
Hippocampus erectus Hier-SSR4
t
F:GCACAACAAGAGGAGGGG
R:GGGCAAGAAGAGGCAGAG
(CTT)
6
170–185 32 4 0.5667 (0.7294)
Hippocampus erectus Hier-SSR5
t
F:GGTTTGGCAGTAGTGGGG
R:TTCGGTTTACGAGTAGAGCA
(TC)
7
289–299 32 5 0.5667 (0.7772)
Hippocampus erectus Hier-SSR6
t
F:CAGCGATGACGAGTGAGT
R:GCCAAAATGAAAACAGAGA
(AGA)
6
104–119 32 4 0.6000 (0.7383)
Hippocampus erectus Hier-SSR8
t
F:TGATGGTTGTGTGAGAAGGA
R:GAGAGAAAAAGACGGCGA
(AC)
8
129–141 32 7 0.7333 (0.8083)
Hippocampus erectus Hier-SSR9
t
F:GTTGATGCGACCCACGAT
R:GCCTTGCTCCTTCTCTACG
(TG)
6
220–242 32 4 0.5667 (0.7526)
Hippocampus erectus Hier-SSR10
t
F:CCAGTTAGCATTGCGTCT
R:TCTTAGCCAGCGAGTGTT
(CAA)
6
104–116 32 4 0.6333 (0.7343)
Hippocampus erectus Hier-SSR11
t
F:CGGGGTAGCAAGGTGAGC
R:CAAGGGGACATTGAAGTAGG
(GT)
6
279–295 32 5 0.6667 (0.6644)
Hippocampus erectus Hier-SSR12
t
F:AGTGGGTGTCTCTGTAAAC
R:CCTTCGCAGTATTCATTG
(TG)
6
223–235 32 7 0.7567 (0.7965)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
97 98
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Hippocampus erectus Hier-SSR13
t
F:TGCCATCATCGCTAACTAA
R:TGCCAAAGACACAAAAAGG
(CA)
6
206–222 32 4 0.5667 (0.7256)
Hippocampus erectus Hier-SSR16
t
F:TACATCAGCATTGACGCC
R:ATAAGTAGATAGCAGCCACG
(CA)
9
277–295 32 7 0.7258 (0.7865)
Hippocampus erectus Hier-SSR17
t
F:TGCCGAATGATGATACAC
R:AATGACGCAATGAGAACA
(CA)
8
230–246 32 4 0.5142 (0.7025)
Hippocampus erectus Hier-SSR18
t
F:TGGACTTTCTTTTCAGCACGA
R:GCTCAGCACCACGCACTC
(AAT)
6
216–231 32 4 0.6333 (0.7363)
Hippocampus erectus Hier-SSR19
t
F:CGGAAGCCACATCTAAACA
R:CATCCACATCCACCCACT
(CAC)
6
164–179 32 4 0.5869 (0.7005)
Hippocampus erectus Hier-SSR21
t
F:CTGGAAATCAACTTCAACACC
R:AGCCAATCCTCGTAGCCT
(ATT)
5
265–284 32 4 0.7568 (0.7867)
Hippocampus erectus Hier-SSR22
t
F:GAGGGTTATGAGCCTTTTG
R:TCGGTTGTTGCTATCTGC
(TGT)
6
262–287 32 5 0.8856 (0.821)
Hippocampus erectus Hier-SSR23
t
F:GCCACCGACACCATCCCT
R:TCTGCGGCTCGTCCTTCA
(GCA)
8
130–148 32 4 0.7562 (0.7122)
Hippocampus erectus Hier-SSR24
t
F:TGGAAATGTAAAAGGAATG
R:TAAAGGAGGTAGGCAATAA
(TGT)
8
268–284 32 5 0.862 (0.7567)
Hippocampus erectus Hier-SSR25
t
F:CCACCTGTGAACACTTGC
R:GCGTTGCTTTCCTCCTAC
(GT)
15
189–205 32 5 0.6556 (0.7255)
Hippocampus erectus Hier-SSR26
t
F:CAGGGCGACAACAAGATG
R:GTAATGGTGGGGAGGGAG
(GT)
15
240–262 32 6 0.8655 (0.7555)
Hippocampus erectus Hier-SSR27
t
F:CAGGAACACCAAATAGCC
R:CGAGTCAAGAGTCTGGAAAG
(GA)
18
201–219 32 6 0.7568 (0.6824)
Hippocampus erectus Hier-SSR28
t
F:GTGAGAAACGCACCAAAC
R:ACACGACAAAACAGCATC
(CA)
16
137–155 32 5 0.8521(0.7865)
Hippocampus erectus Hier-SSR29
t
F:TGCTCACAGGCTTCACAT
R:TCCTTTTCACAGTCCCAC
(CA)
10
203–223 32 4 0.7562 (0.6748)
Hippocampus erectus Hier-SSR30
t
F:TTTTGTTATCGCACTTTGT
R:AGCAGATTTGTAGGAGGG
(AC)
12
278–296 32 5 0.6667 (0.6878)
Lasionycteris noctivagans Lano1
u
F:
$
GGAAACAAGCTTAACATTTCAGG
R:AAAGACATGAAGAAGCCCTGC
AAAG 178–194 30 5 0.700 (0.709)
Lasionycteris noctivagans Lano3
u
F:
$
TCATATATAGGAGTATGTCTCTCGTGG
R:AATGAGCATGCTGGTTGGC
ATCT 237–265 30 7 0.833 (0.774)
Lasionycteris noctivagans Lano4
u
F:
$
GCTTTGGACAGTTTCACGGG
R:ACCAGATGGGAGCTCCTGC
ATCT 283–319 29 10 0.379* (0.825)
Lasionycteris noctivagans Lano8
u
F:
$
TCCATCTACCATCTACCTGCC
R:ATGGGTGGGTGTATGAAAGG
ATGG 242–290 29 11 0.793 (0.852)
Lasionycteris noctivagans Lano10
u
F:
$
GTGCAGCCATCTTGTAACGG
R:CAGCCCTAGCTGGTTTGACC
ATCT 300–356 30 14 0.467* (0.896)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
99 100
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Lasionycteris noctivagans Lano13
u
F:
$
AACTGATCATCTGGTCACTTAGGG
R:CCACTCTATGTACCCTCATAGCTGC
ATCT 271–395 30 14 0.900 (0.887)
Lasionycteris noctivagans Lano15
u
F:
$
GGGACAGCACATCCCTCC
R:CCCTAAGCACCACTGTCAGG
ATCT 196–308 27 8 0.741 (0.733)
Lasionycteris noctivagans Lano22
u
F:
$
TGGTATCCTGTCTCCTGGTCG
R:GATGCACCAGAGCCTCCC
ATCT 233–306 29 13 0.828 (0.834)
Lasionycteris noctivagans Lano26
u
F:
$
CCACACATCTACCCACTCATCC
R:GGCTCTTGGCTTACAGACTGG
ATGG 177–217 30 10 0.367* (0.796)
Lasionycteris noctivagans Lano28
u
F:
$
ATGCAAGTACGCAGTGACCC
R:GGGTGCATATATTGTTTCTGACAGG
AAAG 208–224 29 5 0.621 (0.683)
Lasionycteris noctivagans Lano29
u
F:
$
TGTAACCCTTGCAAGAAAGATGC
R:GGTCAAGGTCAACAGCCAGC
ATGG 200–240 30 11 0.733 (0.852)
Lasionycteris noctivagans Lano31
u
F:
$
ATTGGTTACCATTGCTGGC
R:TCCCTCTCTTTCTCACAGGG
ATCT 195–235 28 11 0.464* (0.854)
Lasionycteris noctivagans Lano32
u
F:
$
ACCCACATTTCTGAGTGACATGG
R:TCGAGCTTGACAAAGCCTACC
ATCT 218–262 29 10 0.414* (0.800)
Lasionycteris noctivagans Lano34
u
F:
$
GAGAGGCAGCACGGAAAGG
R:TGAATTTGTTGTTACTGATGTGAAGG
AAAG 195–235 30 11 0.733 (0.852)
Lasionycteris noctivagans Lano35
u
F:
$
ATCAGTCGGGCATCAAGAGG
R:TGAGAACCAGAGAGCCTGGG
AAAG 215–262 30 17 0.800 (0.891)
Lasionycteris noctivagans Lano40
u
F:
$
CCTTGAAACATTCATTTCTGGG
R:TGTCTTAGTTTGTGCCTTCCG
AAAG 223–255 30 13 0.900 (0.831)
Lasionycteris noctivagans Lano41
u
F:
$
ATCTGTCCAGTGTTGCTCCC
R:TGTGGTGCATTTCCATCC
AAAG 146–190 30 6 0.267* (0.794)
Lasionycteris noctivagans Lano44
u
F:
$
TCACAGTCAGATACCACTATGTACCC
R:TTGTAGTATGTCTCGATACTGCTTTCC
TTCC 284–334 29 14 0.621* (0.891)
Lasiurus cinereus Laci 1
u
F:
$
AGGGCTCAGTAAGCACCAGC
R:AAGCTAGCAGGAGCCAGAGC
TTCC 205–309 29 32 0.724* (0.944)
Lasiurus cinereus Laci 15
u
F:
$
TGAACAATCAGTAGGTATGTAAACTGC
R:CCATATGAAATTGCTGACAGTGC
ATCT 338–366 30 8 0.900 (0.828)
Lasiurus cinereus Laci 20
u
F:
$
GAGTGTTCCAATTAGAAGATAAGGC
R:CTCACCTGCTTCACAATCCC
ATCT 217–249 31 8 0.774 (0.766)
Lasiurus cinereus Laci 22
u
F:
$
CGCAGAAGGTAGCCAAGTAGG
R:GAAGGGCTATTCTCCATTCCC
AAAG 161–217 31 12 0.839 (0.844)
Lasiurus cinereus Laci 25
u
F:
$
TTGCAGATGGCAGATCTTGG
R:AAATATATGAGAGCAAGTGTATTAGCC
ATCT 204–224 31 6 0.290* (0.683)
Lasiurus cinereus Laci 26
u
F:
$
CTTGACATAGACTCATGTTTCACTCC
R:GCACACATAGAGTCCGATGAGG
TTCC 271–321 30 18 0.933 (0.894)
Lasiurus cinereus Laci 28
u
F:
$
TTCTGTTATTTGTCCTGTGAATTGC
R:GTCCGGGTCTGTGAGAGGG
ATATCT 294–342 30 10 0.733* (0.859)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
101 102
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Lasiurus cinereus Laci 29
u
F:
$
GTGTGCCCTTGAGGAACAGC
R:GTCTCTGTGAGCAGAGGAGGG
ATCT 197–251 31 12 0.742* (0.883)
Lasiurus cinereus Laci 31
u
F:
$
GAGCATATGTCAGGAAGGAGG
R:TATGCTCTTGAGGAGCTTGC
AAGAG 309–387 31 13 0.774 (0.872)
Lasiurus cinereus Laci 33
u
F:
$
TGACTAGGGCTGGTTGAGC
R:CAGAATATATTTGTGTACAGAACTGGG
AATAAG 279–379 31 17 0.871 (0.895)
Lasiurus cinereus Laci 34
u
F:
$
GGCTTTCTAACCCTGGGACC
R:TCAGGATTCTTTAGAGAAACAGAAGC
ATCT 259–299 31 13 0.935 (0.894)
Lasiurus cinereus Laci 35
u
F:
$
CAGTTGATTGAACTTCCAAGGG
R:TCATCAGAAGTCCTGGTTGGG
ATATCT 211–337 31 31 0.968 (0.949)
Lasiurus cinereus Laci 36
u
F:
$
CCTTTCTCTGTCCCTCAGTGC
R:TCCACCTCCCACCATTTCC
AAAG 175–230 31 13 0.871 (0.853)
Lasiurus cinereus Laci 37
u
F:
$
CACGACTTCCTGGTACTTCTCG
R:TCTCCTGTTCTTTGCATCCTAGC
TTCC 244–349 27 18 0.222* (0.911)
Lasiurus cinereus Laci 38
u
F:
$
TCACCTAATATGCAGCTCTGGG
R:TGAAAGAGTAACATACATCCGACCC
AAAG 266–342 30 22 0.533* (0.923)
Lasiurus cinereus Laci 39
u
F:
$
GCTCTTGTTGATGTTTCTCTTTCTCC
R:TGATGTTTCAATTGCATGATTCC
AAAG 283–347 31 14 0.935 (0.866)
Lasiurus cinereus Laci 41
u
F:
$
CCAATACAGGCAGCATTAGCC
R:TGCAGTTGGTAATTACTGGAGGG
AAAG 197–321 30 17 0.767 (0.885)
Lasiurus cinereus Laci 42
u
F:
$
TGTTTACCATGTCATCCAGGG
R:TGCATGTGGTATCCCTCCC
TTCC 182–234 31 10 0.516* (0.823)
Lasiurus cinereus Laci 43
u
F:
$
GACCGCTTTGTAAAGTATGTGGG
R:TGCCTGTGGCCTTTATGACC
TTCC 172–224 31 10 0.645 (0.850)
Lasiurus cinereus Laci 48
u
F:
$
TTCCACAAATGCTGAAAGGG
R:TTTCTCTGCGATGGAAGAACC
AAAT 177–217 31 12 0.645 (0.843)
Saurogobio dabryi sdF5010
v
F:GCTCCATTCCCAACCTATAACACA
R:TGCCTTGATGAACGGTTATGTATG
ACAT 78–109 24 10 0.62500* (0.85727)
Saurogobio dabryi sdF5117
v
F:CGAGTAGACTTATGCGTTTCAATGG
R:GAATTTCCCCCACTGCTAATACAA
AAT 134–153 27 8 0.70370 (0.81272)
Saurogobio dabryi sdF5129
v
F:CGAGTAGACTTATGCGTTTCAATGG
R:GAATTTCCCCCACTGCTAATACAA
TC 123–158 27 19 0.74074* (0.92872)
Saurogobio dabryi sdF5145
v
F:AACTGTAGGGCACGACAAATTGAT
R:AGTCTAAACCCGTCTGCAAGAATG
AGAC 188–260 27 18 0.85185 (0.93361)
Saurogobio dabryi sdF5163
v
F:TCTCAGATGACGTTGAGCATATTGA
R:CATTCATCTGGGCTCACTAAAACA
ATCT 158–210 26 15 0.80769 (0.93361)
Saurogobio dabryi sdF5180
v
F:TGTGGGTCTGAGATTTGTGATGTT
R:GGCCCATGCGTAAGTAGGTTATC
AG 127–143 27 9 0.74074 (0.80643)
Saurogobio dabryi sdF5226
v
F:AGACTCGGCTGCACCATCTATTAC
R:AGCAATTTGGGAGATTTGTGATGT
AGTT 113–151 20 10 0.55000* (0.85513)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
103 104
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Saurogobio dabryi sdF5234
v
F:TTTGAGACTGGCTCAGATGTTCAG
R:CAGAGTGGAAATCTGGGTAAATGG
GCT 158–168 27 8 0.66667* (0.83438)
Saurogobio dabryi sdF5257
v
F:TGAGGAAGAGGAGGAGACTTCAGA
R:CTCTATGAGCTCAGATGGGGATTC
GAG 125–134 27 4 0.25926* (0.41090)
Saurogobio dabryi sdF5261
v
F:CACCAGAGCCACATATAAGCACAC
R:ACGAAGACAGGACTCCAGAGAAGA
TCG 121–129 27 6 0.29630* (0.53529)
Saurogobio dabryi sdF5271
v
F:ATGACAAAGGAAAACCACGAGAAA
R:TGCAGATACAGCGCATCACTTTAG
AAAC 114–145 26 16 0.80769 (0.87406)
Saurogobio dabryi sdF5297
v
F:CGAGTAGACGGAGTTCAGCACAT
R:TGTTGTATAAGCGTGTGATGTGGA
AC 122–124 27 2 0.74074* (0.47519)
Saurogobio dabryi sdF5302
v
F:GCATGTTGACCTGCAAGATAGAAA
R:AACATAAATGAAGCCTTGGTGAGC
TA 118–131 27 3 0.14815 (0.14256)
Saurogobio dabryi sdF5318
v
F:CGCTGGATATTGAAAGAGTCTGGT
R:CTTGTCCTCCTAATCCTCCTCCTC
GGA 160–172 27 9 0.62963* (0.77289)
Saurogobio dabryi sdF5328
v
F:GTACGTGGTGTATTGCCAGAACAA
R:CCAAAACAGTCCCTCATGCTTAAT
AC 231–261 26 11 0.46154 (0.54148)
Saurogobio dabryi sdF5336
v
F:GGTGGTGATTAGTAGGCTGGTGAC
R:CTGACTGCCCCCAATTACAGAATA
TAT 108–116 27 4 0.25926* (0.64640)
Saurogobio dabryi sdF5340
v
F:AAAAGACGCCCACACTTTTATCTG
R:TCACAATCCACATTTTCCTTAAACC
CTTT 115–333 27 6 0.14815* (0.69672)
Saurogobio dabryi sdF5351
v
F:CGAGTAGACTAGACGCCCACACTT
R:TTCACAATCCACATTTCCTTAAACC
CTTT 126–210 26 20 0.84615 (0.81146)
Saurogobio dabryi sdF5395
v
F:TTTCTGTACTTGTTAGTTTGGGGTCA
R:GATCAATTAAATGCATCATTGCTGA
TTTC 100–109 27 6 0.37037* (0.64710)
Saurogobio dabryi sdF5432
v
F:AAGAAGAGGAAGGAGAAGGCGAG
R:CGGTTTCCTCCTGTTTTTCTCAGT
GAG 74–99 27 10 0.81481 (0.85255)
Saurogobio dabryi sdF5439
v
F:TTCGGTTTTTACCGTGATCTCAAT
R:GATAACACTGACTGACTGCTGGGA
GAG 139–147 26 5 0.34615* (0.74434)
Saurogobio dabryi sdF5466
v
F:CAGAGCCACATATAAGCACACCAC
R:CGGTTGTACGAAGACAGACTCAGA
TCG 135–153 26 7 0.34615 (0.40573)
Saurogobio dabryi sdF5484
v
F:TTTCCGCAGGCAGAGATAGTAAAG
R:GAGCAGAGTGGCGTTAGAGGG
AC 135–170 25 17 0.72000 (0.90857)
Saurogobio dabryi sdF5506
v
F:TCAAATGTATTTCAGCCGATGCTA
R:ATGAGGGTGTTTGTGTATGTGGGT
ACT 131–147 27 6 0.51852 (0.61635)
Saurogobio dabryi sdF5513
v
F:TAAGCACACCAGTCCCATTCACTA
R:ACAGACTCAGGACTGGAGACGAAG
ATC 94–167 26 9 0.61538 (0.69457)
Saurogobio dabryi sdF6119
v
F:TCATGCAAACAAGAGTTGAGCAAT
R:GGCTCTCAAAATTCTCCCAAGAAG
TGATT 76–93 27 6 0.70370 (0.72607)
Saurogobio dabryi sdF6273
v
F:CACAGACGAGGATTCCAGTCG
R:ACATGCAGTCCCTTACCTGTTCTC
GAG 156–174 27 5 0.81481 (0.76380)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
105 106
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Saurogobio dabryi sdF6293
v
F:CGTCTAGTTTTGTCGCTCTGTTGA
R:TGCTTACTTGAGGTATGCTGGTTG
CATA 78–128 27 8 0.29630* (0.77358)
Saurogobio dabryi sdF6322
v
F:CTTAACTAAACCGCACCCCTCTCT
R:GTCTCCTCTCCTCTGAGCTGACTG
TCC 148–149 27 2 0.00000* (0.07268)
Saurogobio dabryi sdF6324
v
F:TGTAGCGTTCCAAACCTTTCTCAT
R:GGGAGTATGGTGGGGAAGTCTTAT
CCT 136–137 25 2 0.00000* (0.07837)
Saurogobio dabryi sdF6400
v
F:GTGGCTCCTTCCCTTTCACAG
R:AGCAGATTGTACATGTGGCTCAAG
GGA 101–131 26 9 0.80769 (0.83786)
Saurogobio dabryi sdF6432
v
F:TTCTGGACATTCCACCTAAAACATC
R:TCATAGAGGAAACAATGTGTAATCCAA
CTATT 135–198 26 17 0.88462 (0.92534)
Saurogobio dabryi sdF6476
v
F:CGTCTAGTGCTGAAGGAGGTGAGT
R:TCTCAGCCTGGAACACAGAGAGAT
ACTC 144–268 26 25 0.84615 (0.94947)
Saurogobio dabryi sdF6479
v
F:TCCGTTGTTTAGGCTACTGATCAAA
R:TGAGATGACATGACGATAGCTGTG
GATA 166–227 25 17 0.80000* (0.93959)
Saurogobio dabryi sdF7038
v
F:GGCAAGCTGTTTGACTTATTCATTC
R:TTTAACCCACTGGACCACCATATC
AGT 122–450 27 5 0.07407* (0.64011)
Saurogobio dabryi sdF7068
v
F:TTAAAGCAGGGTTCACATCCAC
R:ACGTGTGACATTTTTATCTAGGAATACA
AC 98–102 24 4 0.16667 (0.16046)
Saurogobio dabryi sdF7209
v
F:ACACTACTCGTCTGCCGCAA
R:ACAATGCAGATTGTTTCAAAGCAG
AAAT 98–102 27 2 1.00000* (0.50943)
Saurogobio dabryi sdF7235
v
F:ATCTTTCTCAAAATCTGGCAGGTG
R:AGTTGCTGTAGTGACCCAAAGAGC
TCA 129–213 27 4 0.22222 (0.20894)
Saurogobio dabryi sdF8049
v
F:AAAACACACAAGCCAGAGAGACAG
R:AGGTTGTTTGGTGTAAACGACGAT
ATC 75–94 20 4 0.30000 (0.35000)
Saurogobio dabryi sdF8133
v
F:GTATACCCCCATGGGAAGAAGAAG
R:GGGGGACTACTTTGTAAAAATGGC
AAT 116–131 27 5 0.81481* (0.68134)
Tetrapedia diversipes T1
w
F:ACTGCATACGTGCACGGTGGT
R:GCAGCGAACGAGTCGGAGCA
(GA)
12
257–293 22 6 0.545 (0.647)
Tetrapedia diversipes T2
w
F:CGGCGATACCGTAGCGGGAG
R:GCACGCTCTTCAATCGCGCC
(AG)
5
A
3
G
3
(AGA)
3
(GA)
4
192–198 22 5 0.500 (0.718)
Tetrapedia diversipes T3
w
F:GCACCCTCCTCCGTTCGTGC
R:GCCTCCGAGGTGGCTCGTCT
(GAA)
6
175–181 22 4 0.682 (0.681)
Tetrapedia diversipes T4
w
F:CCCGCGGGTTGCTGGCTAA
R:CCATGGCCCGAACAGGCGAA
(GA)
3
CA(GA)
4
G
2
(GA)
9
181–189 22 4 0.455 (0.680)
Tetrapedia diversipes T5
w
F:TGGGGTTCGATAACGGAGCGGA
R:GGGAGGGCCAGATCGAGCCTA
(AG)
3
TG(AG)
10
202–220 22 9 0.909 (0.816)
Tetrapedia diversipes T6
w
F:TGTAACAAACGATCGGAAGCGGGA
R:CGGTTGTTCGTTATACGTGAGTGTCCG
(CT)
12
223–239 20 7 0.650 (0.640)
Tetrapedia diversipes T7
w
F:ATAACGGCCGCACGCGGAAA
R:TTGTAACGCGGCGGTGAACG
(AG)
3
G
3
(AG)
6
A
3
G
2
(AGA)
2
(AG)
4
200–216 22 9 0.727 (0.853)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
107 108
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Tetrapedia diversipes T9
w
F:CCGGTGTGCGCGAAACAGAGA
R:AGCTCCTTCGGACCCGGCAA
(AG)
3
A
2
(AG)
12
215–255 22 17 0.864 (0.915)
Tetrapedia diversipes T10
w
F:CGCGAGAATTTGGGACCATCGTG
R:CCGCGACGACCCCTGCTCTA
(AG)
10
250–256 22 4 0.455 (0.580)
Tetrapedia diversipes T11
w
F:TCCTGGATCGGGCTGTGCGA
R:CGTTTCAAAGTGTCCGCACAAAACA
(AG)
7
A
2
G
2
T(GA)
2
A(AG)
7
201–263 22 12 0.864 (0.880)
Tetrapedia diversipes T12
w
F:TTCGGGACACGTTCGACGGC
R:TCTGTTCTCCGCGAGGGCGA
(AG)9 179–225 22 12 0.818 (0.860)
Tetrapedia diversipes T13
w
F:TGCACGAAGCAGCCGCCTTT
R:CCCGAGGATCGGGGCAGGAA
(AG)2A2(AG)6A2(AG)2(AG)9 102–128 21 10 0.667 (0.805)
Tetrapedia diversipes T14
w
F:GCTTTAAGCTGTGAATACTGCTCTGGA
R:GGTCCGGGTGTTGCTAGGGC
(AG)15 221–255 18 10 0.278* (0.832)
Tetrapedia diversipes T15
w
F:CGAGTGACCGGCAACGTAGCAAA
R:TTCGTTGCCGCTGTGCAAGT
(CT)8T4(CT)4 139–171 22 16 0.864 (0.866)
Tetrapedia diversipes T16
w
F:TGCGTCGGAACTGCTTTCAGATT
R:CCGGTGTCTCGTAAACGCCGTC
(TC)2T2(TC)13TGTCTG(TC)3 162–188 22 14 0.909 (0.894)
Tetrapedia diversipes T17_2
w
F:CGAGGTTTCGTTTACGTCCAG
R:GTTTGGACGATTACACGCGG
(CT)11 219–257 22 13 0.909 (0.862)
Tetrapedia diversipes T18
w
F:GCTACTACTACTAACCTTCGAGCCCA
R:CGTTGGTTCGCTTTGCACGGG
(AG)14 256–288 22 14 0.636 (0.877)
Tetrapedia diversipes T20
w
F:GCAGGCCACGGCCGGTAAAT
R:CGGTAAGCGCGAGCATCGACA
(CT)13 246–267 21 8 0.762 (0.783)
Tetrapedia diversipes T23
w
F:CAAAATCGATTCCCCGTGGC
R:AGTTCGGGCAACTTTCGAT
(AG)11 207–227 22 9 0.818 (0.856)
Tetrapedia diversipes T24
w
F:ACACCCACCGAGATTACGGCCT
R:AAAACCGTGTGCGCCGTTGG
(GA)22 251–287 22 8 0.545 (0.655)
Tetrapedia diversipes T25
w
F:TGTTCACTGTGTATGCGTGT
R:GGATCGATCCAGGTCGATCTG
(GA)5A2GAC(AG)13 192–228 21 16 0.810 (0.902)
Solen grandis DZC-2
x
F:CCAAAAATGGTTTTAGTCATGTTGC
R:TTCAGATTTGTCATGGAACGATTG
(GT)
11
136–172 30 13 0.8333 (0.9158)
Solen grandis DZC-9
x
F:ACGAAAATCAAGTAATGATCCCAA
R:TGGTGATGATAAGGAATAAGATGATG
(ATC)
12
126–175 30 11 0.6333 (0.7825)
Solen grandis DZC-15
x
F:AATTGCTAAATCATGTTGATACTGATGA
R:AAATTCTTTCACATTTTGGGGAGA
(TC)
14
68–114 30 13 0.6333* (0.7627)
Solen grandis DZC-22
x
F:GGGTGGGTCTGTGGTTATGTCTT
R:AATGGACGATAAAGTAGCGATGGA
(CT)
11
76–120 30 15 1.0000 (0.8938)
Solen grandis DZC-19
x
F:TTTTTCTTGTTTTCACCATCCATAA
R:ATTACATAACCAGTGACCTTGGCA
(GA)
13
126–154 30 11 1.0000* (0.8831)
Solen grandis DZC-28
x
F:AAAGCAATGTCAATTTCCGTGTTT
R:AGCGAAAGTTCACGACATAGATCC
(TG)
8
128–200 30 22 1.0000* (0.9475)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
109 110
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Solen grandis DZC-31
x
F:CTCAGACCAAGCGAGATGTTTTG
R:ACGCTTCCTTTTGCAACTGTTTAT
(CA)
17
102–130 30 14 1.0000* (0.9085)
Solen grandis DZC-16
x
F:AGTCAACATAAAGCATTTACAATTATGC
R:GCGATTTGTATCGATATGTGTCTAAA
(CT)
20
124–160 30 14 1.0000 (0.9147)
Solen grandis DZC-36
x
F:TATGATATTGGCGACAGAAGGATG
R:TATTTTCGGGGAAAGAGACAGACA
(AC)
19
112–146 30 15 0.4667 (0.9079)
Solen grandis DZC-96
x
F:GGTGGCAGAGGCACTAAAATAAAA
R:TCCCACCTCTCACCTGTTCATAAT
(TGA)
6
152–164 30 7 0.9333 (0.6751)
Solen grandis DZC-98
x
F:CATCTTTTTCATACATTACAGGGGTGA
R:GTGAGTGTCTTTAGGGCCATCTTG
(TA)
6
130–162 30 15 1.0000 (0.8164)
Solen grandis DZC-82
x
F:ACGCCTAGGGAGTAACTAAGGATTTC
R:ACGTTTGCGACTGTAACAATGAGA
(GT)
19
144–190 30 19 0.6667 (0.9367)
Solen grandis DZC-87
x
F:CTCATTGTTACAGTCGCAAACGTC
R:GTAGCATGTGATTTGTCGTCCTTG
(ATT)
13
120–160 30 9 0.8333 (0.5887)
Solen grandis DZC-66
x
F:ATTTCCAAGGCATGAAAAGACAAA
R:ATTTCCAAGGCATGAAAAGACAAA
(TC)
14
130–158 30 14 0.8667 (0.8288)
Solen grandis DZC-102
x
F:AGTTGTATGTGTCGTCTGCGGTAA
R:CCCTTGTACCAATGAATAACGAGG
(TTG)
5
146–180 30 12 0.8333 (0.8243)
Solen grandis DZC-131
x
F:GGCCTTCACTCGATTCTATCACAT
R:GTGACTTCACGCTCTGGTAAGGTT
(AGAA)
8
130–154 30 9 0.9667 (0.6763)
Solen grandis DZC-136
x
F:AAACCACACCACAATGCACAATAC
R:AGCTTTCAGACCTGGGTTTTCTCT
(AAC)
5
130–143 30 7 0.8333 (0.7011)
Solen grandis DZC-139
x
F:CAGCAATAGGAAAAAGCCCTAACA
R:TGGAATTCAAAAGTAAGTGTCCGA
(GAT)
13
117–150 30 13 0.8333 (0.8266)
Solen grandis DZC-149
x
F: TCATAACTGCATCGTATTGTTGGC
R: GCTGAACGTCGCTATATGACTGAA
(AATG)
4
146–170 30 11 0.7667 (0.8147)
Solen grandis DZC-113
x
F: AACACAATGTCTCTGTGCCTGTGT
R: AACACTCACTCCCACTCAATCTCA
(GA)
8
124–134 30 6 0.6333 (0.7136)
Solen grandis DZC-70
x
F: TTTGACATTGGTTTTTAGGCTGTT
R: CGTCGTTGCACTGAAAAATAAAAT
(TC)
9
146–180 30 11 0.9333 (0.5915)
Solen grandis DZC-78
x
F: CTGGTAAGCTGTAAGCGATGATGA
R: TTTTGGTTTGTCAGTAGGTTTCCAA
(ATG)
11
133–167 30 15 0.9667 (0.8390)
Solen grandis DZC-77
x
F: TGCATTGAATTTTGAGGTAGGTAGG
R: TCGGATACGGTACAATCGTAAGTG
(CA)
12
130–194 30 16 0.9000 (0.7989)
Solen grandis DZC-86
x
F: AAATCACATTCAAAGAGTGCCTCC
R: GCTCGCAGAAATAAAAGCTGCTAA
(ATG)
7
144–160 30 7 1.0000 (0.5927)
Solen grandis DZC-57
x
F: TGCTTACAGCGCTTTTATTTCTCA
R: TGTTTTCATGTTTTATTTCGTACCCA
(AG)
16
134–168 30 13 1.0000 (0.8503)
Solen grandis DZC-93
x
F: TGTGCAGTTAATTGTTGTCAGTGC
R: TAATTAGAGGAAAGCCCTGTCGTG
(AT)
9
160–200 30 11 1.0000 (0.7203)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
111 112
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Solen grandis DZC-92
x
F: TTTGAACGTTCTCTTTAGTTGGTCG
R: GGGCATACTCCACACATTTCTTTT
(TG)
10
126–156 30 8 0.9667 (0.7062)
Solen grandis DZC-88
x
F: AGATATCATGAAAACGGGATCTGG
R:ACAAGGTTGCACTTATGTCTGTATTCTT
(TA)
6
120–158 30 18 0.9333 (0.9260)
Solen grandis DZC-73
x
F: CTTTTGTTCAAATGGACGGCTTAC
R: TTCTGTGTGTTCCCTTTTGGTTCT
(CT)
20
130–164 30 16 0.9667 (0.9186)
Solen grandis DZC-72
x
F: ATAGCGCCATGTTAGACCTTTGAA
R: CCCTGTGAGGTACTCGTTTGCTAT
(GT)
20
122–160 30 19 0.933 (0.9412)
Solen grandis DZC-64
x
F:GATAAATGTACTTGCATTACTTCAGGC
R: GTAGCACTTTGTCTAATGATGGCA
(TG)
7
140–170 30 13 0.8333 (0.8842)
Solen grandis DZC-56
x
F: AGACGGACAGTCTTACCACTTTGTT
R: GGGAGTGTGGAAGGACAGTAACTC
(AC)
10
154–204 30 15 0.9000 (0.9045)
Solen grandis DZC-99
x
F: TGTGAAAACATTGCAAGGTAGGAT
R: TTCAGCAAAACAAGAAAACAATGA
(CA)
16
150–184 30 15 0.5000 (0.8525)
Solen grandis DZC-89
x
F: TGTGTTGCCTAACACGTCTTGATT
R: TCATAAAATCTGCTGCAGTTACGC
(GA)
6
104–130 30 14 0.9667 (0.8588)
Solen grandis DZC-58
x
F: TATGACTGAAATACTGTCGAGGCG
R: TAAAACAACATTTGTTGCCTCCCT
(AGTCA)
6
124–148 30 10 0.8000 (0.5616)
Solen grandis DZC-55
x
F: ATCGGATGTGGTCATTTTGATTG
R: TGGTTTAAAATGGTATGAGCGTATTG
(GT)
16
140–186 30 20 0.7000 (0.9362)
Solen grandis DZC-18
x
F: TTAAGTTGTTGCCTTGAGTAGCCC
R: TTTCATCCGATAAGGAGATTCGAG
(GT)
9
114–126 30 7 0.9667 (0.6452)
Solen grandis DZC-137
x
F: GTAGTGTCCTTTCGGCTTATCACC
R: TCCGGATCAGTAACTCAAAACCAT
(CATA)
5
102–114 30 6 1.0000 (0.6079)
Solen grandis DZC-147
x
F:GCACACGAGTACATATTATGGGATCA
R: TCGCTTTAAGGGAATAGGTAAGGC
(TC)
15
92–118 30 12 0.8333 (0.8785)
Solen grandis DZC-142
x
F: GTGCGATTGCAGATTGTTCTGT
R: TGCAATCGACGTGAAATAAACAAG
(ACAG)
4
154–174 30 11 0.7333 (0.8893)
Solen grandis DZC-97
x
F: CAAATGTCTAGCCTTCTGACACCA
R: ATTCTCTTTCTCTCCCTCTCTCCC
(AG)
6
100–128 30 13 0.8333 (0.8588)
Solen grandis DZC-23
x
F: GGGTGGGTCTGTGGTTATGTCTT
R: AATGGACGATAAAGTAGCGATGGA
(GT)
9
82–128 30 14 0.7333 (0.8470)
Solen grandis DZC-25
x
F: GCCGGAAATAGGGTATGATGTTTT
R: CCAGTACCATTTAAAAGCCACCAC
(TGA)
18
100–164 30 16 0.7667 (0.9147)
Solen grandis DZC-20
x
F: TTCAAATTTACAACCCAACCCAAC
R: AATCTCCTTCCGTTGAAGAAATCC
(AG)
13
96–124 30 13 0.7333 (0.9192)
Solen grandis DZC-24
x
F: GCCGGAAATAGGGTATGATGTTTT
R: CCAGTACCATTTAAAAGCCACCAC
(GTT)
8
83–152 30 14 0.8333 (0.9023)
Solen grandis DZC-45
x
F:GGGTGACAAGTGACAACAATAGAGC
R: CAAAATCAAATTGTAGCCCAGGTC
(ATA)
6
130–160 30 9 0.7667 (0.8090)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
113 114
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Solen grandis DZC-1
x
F: TTGCGACGGAGTGGTAATTTCATA
R: AAAATTGATTGTGCGGCCTTTTT
(CT)
10
128–146 30 10 0.9667 (0.8751)
Solen grandis DZC-46
x
F: CGTATTTCTTCTTCATTTCGTCCG
R: CCCTTTGCTCTTCTCCTTGTGATA
(TGAT)
9
96–172 30 13 0.7667 (0.8915)
Solen grandis DZC-3
x
F: TTTAAAACCGACATCATCTTGCAT
R: ATCCTCTTCTCCTCCTTTTTCCAA
(GA)
12
78–100 30 12 1.0000 (0.9119)
Solen grandis DZC-5
x
F: TTGGCTGCATGTTGATTTTATTTG
R: AAATCATTTATGCACTGCACATTCA
(TA)
6
148–160 30 7 0.9333 (0.8169)
Boehmeria longispica N1
y
F:AATTTCAAAAGCGTTGAGCG
R:TTGTTCTCTTTTTCCACGGC
(T)17 163 30 3 0.82 (0.66)
Boehmeria longispica N2
y
F:CGTCGAGTTTCTATGGAGCG
R:GGGATAAACAAAGTAAGCAAGCA
(T)17 109 30 2 0.00* (0.51)
Boehmeria longispica N3
y
F:ACTGATCCAGCTTCCTTCAG
R:CCACACAAGGCGGGTAATAA
(A)15 166 30 2 0.46 (0.50)
Boehmeria longispica N4
y
F:CCCAATTTAGTTGTGTCTAATTCTCA
R:TTTAGTTTTGCGTTTGGGTT
(T)16 104 30 2 0.47 (0.44)
Boehmeria longispica N5
y
F:TTTCTGCCACAACAGGCATA
R:CTTTTGCGTGATGGGTTTTT
(A)15 125 30 2 0.39 (0.39)
Boehmeria longispica N6
y
F:AGACCCTCCGTTTCAGAGGT
R:CACCGCAGCAAAACTCTACA
(AG)10 106 30 2 0.29 (0.45)
Boehmeria longispica N7
y
F:TGGTTTAGTTACCAAAATGCCC
R:TTCTCTTTGGTCGTGTTCCA
(AC)8 113 30 2 0.00* (0.31)
Boehmeria longispica N8
y
F:ATCCTAGGAGCCAAAAACCG
R:CCTCTCTCTATCTCCTTGGGC
(AG)13 140 30 3 0.47 (0.68)
Boehmeria longispica N9
y
F:CTTCGATACCTCCAAGTCGC
R:CCTAACCCTCGGGAAGAAAA
(CT)8 136 30 3 0.52 (0.61)
Boehmeria longispica N10
y
F:TTCTCACCGTTAATCTCGGC
R:AATCTCTGGACTAATATTCTGTGATTC
(TC)9 113 30 2 0.31 (0.51)
Boehmeria longispica N11
y
F:GGATTCATTTATGGGTGCCTT
R:CCCGTAGTTGTGATTGTGACC
(CAA)6 130 30 2 0.53 (0.40)
Boehmeria longispica N12
y
F:CCCCTTTTGCAGTTGTTGTT
R:TGTCAAGGAGGACAAGGCTC
(TTG)14 116 30 2 0.11* (0.50)
Boehmeria longispica N13
y
F:GCATACATAGCCCACGGATT
R:TCCAAGCATACCAAGCATCTC
(GGA)6 112 30 2 0.05* (0.50)
Boehmeria longispica N14
y
F:CATTGGATAGACCAAAATCGC
R:CAAATCTCAATTATACCCCTCCTT
(GAA)8 103 30 2 0.42 (0.44)
Boehmeria longispica N15
y
F:CTCCCAATCATTGCCAAATC
R:TATCGCTTCTTGGGCTTCAT
(AGA)5 110 30 3 0.20 (0.19)
Boehmeria longispica N16
y
F:ACCTCACAGTGGAGGCTTGT
R:CAGCCTATACGCAAAGGTCA
(ATTA)4 142 30 2 0.00 * (0.37)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
115 116
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Boehmeria longispica N17
y
F:CCAACCAGCTTTTGAAGGTC
R:CCAGAGGTATAATTAGTTGTGCTAGTT
(AAAT)4 139 30 2 0.23 (0.49)
Boehmeria longispica N18
y
F:CTTTTTCAATGGAGGAGTTCG
R:CACACGCAAGACATAGTATTGGA
(TAAA)4 114 30 3 0.21* (0.61)
Boehmeria longispica N19
y
F:ACATATCGAGAATCGGCGAC
R:AAAATGTCGACAGGGTTTGT
(AAAT)4 127 30 2 0.36 (0.46)
Boehmeria longispica N20
y
F:CGAATCCATTTGACATCTCTG
R:CGAATGTCGAATCCTAAAGCA
(TATT)5 148 30 3 0.47 (0.66)
Boehmeria longispica N21
y
F:TGAGAGAAAAAGAAAGAAAAATTTGA
R:GTGGGAAAAGCCCTTGATTT
(AAGGA)3 151 30 2 0.29(0.33)
Boehmeria longispica N22
y
F:GAATCGAGAGATTATCGGCG
R:CATCAAATGACACATCAATCCC
(AGTGG)3 103 30 3 0.40 (0.62)
Boehmeria longispica N23
y
F:CACGGTTTTCCAAAAATCAAA
R:GCTTTCTAAGCCATGATTTTCA
(ATTTA)3 156 30 3 0.43 (0.64)
Boehmeria longispica N24
y
F:TCCAACCAAGGAGGAGAATTT
R:AACATTTCTAAGCCATGATTTTCA
(ATTTA)3 145 30 2 0.37 (0.48)
Boehmeria longispica N25
y
F:TAGGGCTTGGATTATGCTCG
R:TCCGTTCGAGATTCTATCGC
(TCTCT)3 151 30 2 0.57 (0.50)
Boehmeria longispica N26
y
F:AAGCTGAACGCCGAGATG
R:CCCACACGAGTTTCACCTCT
(GAGTCG)3 163 30 2 0.23 (0.42)
Boehmeria longispica N27
y
F:CTGAAGCTGAAAGCCGAGAT
R:TCACCTTCACTCACGCTCAC
(TCGGAG)3 117 30 3 0.62 (0.49)
Boehmeria longispica N28
y
F:TGTTTATCTTTCCACCCCCT
R:ATACTTGGACCGTTTGAGCC
(ATTTTT)3 141 30 2 0.64 (0.45)
Boehmeria longispica N29
y
F:AGGCGTTTCAGAGGATCAAC
R:GCGTAGCCTTCTTCTCCTCC
(CATTGT)3 151 30 3 0.14 (0.36)
Boehmeria longispica N30
y
F:CATCAATGGTCACTCACGCT
R:AGAAGCTGAAAGCCGAGATG
(CTCCGA)3 126 30 2 0.41 (0.33)
Exopalaemon carinicauda EC01
z
F:TGAACACTATTGGGAAACCTG
R:CTCATGCTTTAAGACGAACGT
(ATT)6(TTA)6(TTA)5(TTG)5 353–404 30 4 0.8000 (0.5514)
Exopalaemon carinicauda EC02
z
F:TTTTGGTGTCTCCGTGCCT
R:CCAGGCGAACTACGACAGAT
(AC)14 240–353 30 7 0.5862 (0.7592)
Exopalaemon carinicauda EC03
z
F:GAGGTTGGTCGGTCTGTTTAT
R:ATTCGTTGGCATCCTTCAG
(AG)16 89–110 30 4 0.0667 (0.1881)
Exopalaemon carinicauda EC04
z
F:GAATAGAGGAGGTGGCTGAG
R:CACTTTCTGAGGAGTAGGGAG
(AGT)16 250–353 30 8 0.6897 (0.7169)
Exopalaemon carinicauda EC05
z
F:TCCGTAGTTAGGACGCTTGTT
R:TTTATTCAGCCTTAGCCATCAG
(CTT)12 242–343 30 8 0.6667 (0.8395)
Exopalaemon carinicauda EC06
z
F:GTCCAAACTCCGAGTGAAAAT
R:ATCGCAACACCGACAGAC
(CTT)23 190–239 30 8 0.7667 (0.8452)
Exopalaemon carinicauda EC07
z
F:TGATCAGGGGTAGATGGTTT
R:GGCAAAAGGGATTTCTAATG
(GAT)10 242–353 30 8 0.6667 (0.8542)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
117 118
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Exopalaemon carinicauda EC08
z
F:ACACAAGGGCCAACAGTCT
R:GCCGTGATTCCTCCTTTT
(TCA)10 242–353 30 6 0.7241 (0.5650)
Exopalaemon carinicauda EC09
z
F:CGAGCCACAAAAGACACAT
R:CAAAGACGTGGACGAAATT
(TCT)10 147–190 30 4 0.5667 (0.6469)
Exopalaemon carinicauda EC10
z
F:AATCCTTCGGGAATCTAGTC
R:CAGAATAGCACCTTTCCAGA
(TGAT)5 404–489 30 9 0.5333 (0.8107)
Exopalaemon carinicauda EC11
z
F:TTTCCCAAGCCGTAACTA
R:AGGTGTGGAGACAGTGCC
(CA)6 110–172 30 3 0.3000* (0.4910)
Exopalaemon carinicauda EC12
z
F:TGGAATCCTCTCCTGCAT
R:CACTGATTGACTTTGGGC
(TA)6 298–361 30 11 0.8571 (0.9058)
Exopalaemon carinicauda EC13
z
F:CCTCTGGGCTGTAGGATGT
R:GGTACATGACAGGGTCCGT
(CT)28 242–305 30 5 0.6071 (0.6149)
Exopalaemon carinicauda EC14
z
F:GCAGCAGCACTTAGGTTAG
R:CTTGTGGAGCAAATAGGC
(AG)7 194–239 30 4 0.3571* (0.7188)
Exopalaemon carinicauda EC15
z
F:ATGGAGTCTCCGAGGATG
R:TGTAGGTGCTGGTGCTTG
(TC)10 103–148 30 6 0.6333 (0.5458)
Exopalaemon carinicauda EC16
z
F:ATGGAGTCTCCGAGGATG
R:TGTAGGTGCTGGTGCTTG
(CT)32 110–185 30 5 0.7143 (0.5669)
Exopalaemon carinicauda EC17
z
F:AAATCCGTGTCTGCTGCG
R:AGGAAAGCAAGGCTGGTG
(TACA)7 345–404 30 3 0.7333 (0.5893)
Exopalaemon carinicauda EC18
z
F:CAATGACGACCAGAACGAT
R:GAAAGCAACACTTGAAACG
(CTAT)8 190–242 30 4 0.4074 (0.7400)
Exopalaemon carinicauda EC19
z
F:AGGCTGGGTTGACAAATAC
R:CAAAGAGTGTGCAAAAAGG
(AGGGTT)5 242–340 30 4 0.8276 (0.7011)
Exopalaemon carinicauda EC20
z
F:CGTATCATTGTGTGCTTGTG
R:ACATCTACCTGGCGACATAT
(GGGTTA)5 89–110 30 5 0.4000 (0.6136)
Exopalaemon carinicauda EC21
z
F:GCATGTTGGCGTTTTGTAT
R:AAGGGGGTCTTATTTGAGC
(ACCCTA)11 187–236 30 6 0.5862 (0.6933)
Exopalaemon carinicauda EC22
z
F:CACGAGAACACTGTCCACTG
R:GCCCTGCTGTCTACATCCTT
(ATAA)5 180–213 30 4 0.7667 (0.6288)
Exopalaemon carinicauda EC23
z
F:GAATAGAGGAGGTGGCGTAG
R:TTTCACTTCTGAGGAGTAGGGAG
(AGT)16 275–324 30 3 0.4828* (0.4204)
Exopalaemon carinicauda EC24
z
F:AGGACATTGCGTCTGCTCA
R:CTGCCCTCATAATCCAGTGTC
(GGA)14 291–332 30 7 0.2500 (0.7981)
Exopalaemon carinicauda EC25
z
F:TGATGCAAGGAGAGCGTG
R:AAGGAATGCCTGCCTACTAT
(AAT)6 147–190 30 7 0.8667* (0.8164)
Exopalaemon carinicauda EC26
z
F:AGAAATACGCTATGGAAGACC
R:TTTACCAGCCCAATGAGT
(AT)7 353–401 30 7 0.9000 (0.8672)
Exopalaemon carinicauda EC27
z
F:ATCGGAACTCTCTAAATGCC
R:GTGTGCTGGTGCCTGAAA
(TC)28 146–187 30 11 0.7322 (0.9051)
Exopalaemon carinicauda EC28
z
F:GCGAAGTGAACATCAAAG
R:GGACAGAACCAGAAGCAG
(AG)20 345–405 30 10 0.9200 (0.8808)
Exopalaemon carinicauda EC29
z
F:GAACGCTGGTCAGAAACA
R:CTCATGGAAATCAATGTGGT
(AAG)7 242–267 30 10 0.9000 (0.8672)
Exopalaemon carinicauda EC30
z
F:TTCTCTCATTCGTTGGCATC
R:CAGAGAACATTGGCGAGAG
(TC)13 202–242 30 11 0.8667 (0.8949)
Conservation Genet Resour
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Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
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44
UNCORRECTED PROOF
119 120
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Exopalaemon carinicauda EC31
z
F:CTCCGAGGATGGACTAAAA
R:TAGGTGCTGGTGCCTTAAA
(CT)30 112–138 30 10 0.9667 (0.8712)
Exopalaemon carinicauda EC32
z
F:ATTGACGCCCATTGAGAT
R:TCATTTGTTGATGTCGGC
(CATA)5 231–267 30 8 0.7333 (0.8644)
Exopalaemon carinicauda EC33
z
F:ACCTTATGTCGCCAGTCC
R:CGCACCCATTACAGATTG
(GA)29 254–322 30 11 0.9333 (0.8706)
Lutjanus stellatus Ls01
A
F:GCCCCCAGCTAATTCTGTGTCT
R:GCCCAGTTTTTGTTGGTCTGAG
(GT)8 145 24 8 0.81 (0.79)
Lutjanus stellatus Ls03
A
F:CAGCTGCATGCGTCCTTTC
R:CAGATCCCCACAGCCTCCAGTGT
(CA)14 370 24 10 0.81 (0.71)
Lutjanus stellatus Ls04
A
F:TGTGACAAAGCGCCCTCCAG
R:TTCGCAAACAGATCCAAGACCTCA
(CA)9 298 24 21 0.94 (1.00)
Lutjanus stellatus Ls05
A
F:ATTCCAGGGCTGCAAAAATACTGT
R:CGGCCGCACTAGTGATTCTCTT
(AC)8 352 24 14 0.90 (0.71)
Lutjanus stellatus Ls06
A
F:AACCGCAAACTTTATCTCCACACT
R:TCTTTCTTGCCCTCTCCTCCTCA
(GA)9 392 24 11 0.87 (0.92)
Lutjanus stellatus Ls09
A
F:GAGGGGGAAAGGGAGGTCAT
R:TGAGTGAATGCCAAATTGAAGAAA
(TGTC)6 224 24 7 0.68 (0.58)
Lutjanus stellatus Ls10
A
F:CGTGCAGCCCAGTTTTTGTTT
R:CTGGGACGGGAGTGTTTTTGTAA
(GTT)5 275 24 10 0.88 (0.88)
Lutjanus stellatus Ls11
A
F:TCTCCGGTGTAAGTTCCTCCAGAA
R:CTGCGTCGTGTGATTGCTTTCA
(GT)8 276 24 8 0.73 (0.96)
Lutjanus stellatus Ls12
A
F:ATAACTGCAGGGCTCTGTGGTCTG
R:CAAAATTGCCAATGGGCTCTACAG
(TAT)5 316 24 16 0.93 (0.87)
Lutjanus stellatus Ls13
A
F:ACAACATGGCGCGTCAAAAC
R:GATCACAACATGTCTGCGAACTGT
(CA)9 200 24 11 0.83 (0.63)
Lutjanus stellatus Ls16
A
F:GATAGATCGCCGGTTTGATGAAT
R:TCACTCCAGTTTTCCATTTTGTCTT
(GATA)8 277 24 11 0.84 (0.96)
Lutjanus stellatus Ls17
A
F:AGCGCCAAGTCTCATCATCACAT
R:CACACCCAGCTCTCCACAAACAC
(CA)17 222 24 9 0.78 (0.63)
Lutjanus stellatus Ls19
A
F:CCAGGGCTTCAAAGCAAAGGTAG
R:AACAGATCCGCCGGTTGGTC
(GT)24 162 24 9 0.67 (0.66)
Lutjanus stellatus Ls20
A
F:TGAGAGGGTGATACAGAAAAACA
R:CAGACAGACGCACAAACATACA
(CT)43 247 24 7 0.83 (0.83)
Lutjanus stellatus Ls21
A
F:TGACTGTCCACCGGTAAGAGG
R:ACACTCGGTCCATCGTCGTC
(GT)17 271 24 5 0.88 (0.70)
Lutjanus stellatus Ls22
A
F:TTTGTCTGTCAGTGTTGTCTGTCC
R:TTTCCCCTCCAGCAAACTG
(GT)8 175 24 14 0.75 (0.84)
Lutjanus stellatus Ls23
A
F:AAACTGGCCTTTAATGACAGGA
R:TTATCTTTCCCCCATTTCTATCAC
(GT)10 242 24 9 0.75 (0.77)
Lutjanus stellatus Ls28
A
F:TGATTGCCAAGCTGAACATT
R:GCTCGAGGCTCATCAACAG
(CA)18 203 24 6 0.83 (0.80)
Conservation Genet Resour
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Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
121 122
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Lutjanus stellatus Ls30
A
F:GCTTACGCGTGGACTACTTTA
R:GTTTGTGCGATACTTTTCTTGAG
(CA)15 382 24 7 0.71 (0.75)
Lutjanus stellatus Ls31
A
F:GAGGGCTGGTGGGTATCTTT
R:TGCGTGTATGTGCAGGTCAT
(CA)13 333 24 8 0.79 (0.87)
Lutjanus stellatus Ls35
A
F:TGTGCAACAGGCTTTGAGATAC
R:CTGCCAGGGGTTTCACAAT
(GT)8 373 24 4 0.63 (0.69)
Lutjanus stellatus Ls37
A
F:GAGAGCGAGGAGGAGGAGA
R:ACTGTGTTCCCGTTGTGATG
(CA)12 315 24 7 0.83 (0.81)
Lutjanus stellatus Ls38
A
F:CACTGCCGCTACACTGC
R:TCTGAGCCTCTGTTTGAAGA
(CA)12 283 24 11 0.83 (0.91)
Sinopodophyllum hexandrum Sh8
B
F:CTCTTATCCATACTTAAATCC
R:GAGGATGCTGGAGGATGC
(TTA)5 193–199 65 4 0.519 (0.423)
Sinopodophyllum hexandrum Sh16
B
F:CGTGATGTAGGTGAGCTTAT
R:GTGAATCGTCTACTAGTGCA
(ATT)8 144–150 65 4 0.650 (0.409)
Sinopodophyllum hexandrum Sh33
B
F:CCAATAGTGAAGAATGACTTAA
R:GATGAAAACTTTGATTTGATGAT
(TCA)5 176–179 65 2 0.365 (0.320)
Sinopodophyllum hexandrum Sh42
B
F:GAACGCGAAGATGAAGAAGA
R:TTCAATCATCAGTAACAAACCA
(TGA)5 158–159 65 2 0.394 (0.231)
Sinopodophyllum hexandrum Sh45
B
F:GAACCCGCTAGGCTCAGT
R:GGATTCGTATTGATATACACAT
(CAA)5 160–172 65 6 0.733* (0.654)
Sinopodophyllum hexandrum Sh47
B
F:GGGGATGGTAAATGAATGCA
R:GAAAGGAAGGATCGAAAAGG
(TAT)6 165–168 65 2 0.473 (0.462)
Sinopodophyllum hexandrum Sh72
B
F:CCACAAACATAACATGCAAAC
R:CGATACCATCCTTATGGTAG
(CTG)5 167–170 65 2 0.440 (0.654)
Sinopodophyllum hexandrum Sh80
B
F:GATGATGGGATTTGGGAACT
R:GCCTAGCTAGCTCCCTTC
(ATG)8 194–197 65 2 0.482 (0.577)
Sinopodophyllum hexandrum Sh99
B
F:CCTGGTCGAGATGAAGAAAA
R:CTTGGCCAGATTTGCGCC
(CT)10 174–180 65 4 0.531 (0.560)
Sinopodophyllum hexandrum Sh121
B
F:CCTAGACGTGACAATGTTTTA
R:CAAGGCTTCGTGGAAGTTG
(TTTA)4 164–168 65 2 0.497 (0.462)
Sinopodophyllum hexandrum Sh131
B
F:GGGTGAACAAACCCTGTGT
R:CTATGTATTCGATGATGTTCG
(TTAA)7 170–175 65 2 0.500 (0.539)
Sinopodophyllum hexandrum Sh140
B
F:GGACCCAATTGTAGACACC
R:CTGTTGAGGCTGGTCCCT
(AG)8 192–215 65 2 0.426 (0.385)
Sinopodophyllum hexandrum Sh151
B
F:CCCGAGATGGGATCAAGC
R:GATGATTCGATTCTCTTTTCG
(TA)21 122–130 65 2 0.286 (0.192)
Sinopodophyllum hexandrum Sh161
B
F:GCCAATGACATGCAGATGTA
R:AGTAAGTAACTTCAATTAATAGG
(ATA)6 131–137 65 2 0.473 (0.231)
Sinopodophyllum hexandrum Sh163
B
F:GCCAGGCTCAGTTGCCC
R:CTCCCCTGCTGACCTCTA
(ACC)5 172–181 65 3 0.536 (0.462)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
123 124
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Sinopodophyllum hexandrum Sh164
B
F:GAATGGCAAATCCTAGTTACT
R:GCTTCACTTGCTTATTGACC
(AATT)3 181–186 65 4 0.598* (0.640)
Sinopodophyllum hexandrum Sh166
B
F:CCATTTATGTATAAAATTCCAGA
R:GAAATGTTCCAACACCACCA
(GAT)7 267–300 65 3 0.606 (0.600)
Sinopodophyllum hexandrum Sh168
B
F:CTGGAATATGTGCCATTGGT
R:CAGGAATTGCTTCGGTACG
(TTTA)3 149–153 65 4 0.748* (0.423)
Sinopodophyllum hexandrum Sh170
B
F:GGGATTCAATCACCGCCG
R:CGATCTCTCCGCAACCTC
(TTG)9 148–161 65 2 0.486 (0.583)
Sinopodophyllum hexandrum Sh175
B
F:CATTGGAAACGAGCTCTTTC
R:GTAAGTTAGCACCACAACTAA
(AGAA)4 159–162 65 2 0.499 (0.577)
Sinopodophyllum hexandrum Sh186
B
F:GTTGTCCTCTAGTGGGGTA
R:TAGCTTTACCAGCACCACC
(CTG)8 162–166 65 4 0.652* (0.654)
Sinopodophyllum hexandrum Sh209
B
F:GCAAGTCCGCCTCCAGG
R:GTGGGTCATATCACCTGCA
(TTA)4 158–161 65 2 0.493 (0.577)
Sinopodophyllum hexandrum Sh211
B
F:GTTGTCTGCCTTGATTATGG
R:GTAGGTTTGGTCAGAATTTTC
(GAT)8 152–156 65 3 0.642 (0.462)
Sinopodophyllum hexandrum Sh219
B
F:CTCTTATATGGATTTTAGGGC
R:CCCTACCACCGATGTGATA
(ATT)6 166–172 65 2 0.497 (0.600)
Sinopodophyllum hexandrum Sh225
B
F:CTACTGCTAACAATAATAGTCA
R:GAAGAGTCTAGCTACTCCG
(AAT)6 151–163 65 3 0.603 (0.615)
Sinopodophyllum hexandrum Sh236
B
F:GGATCATTGTCATAGCAACAA
R:CAAGGTGATCCTTTATCTGG
(TGA)9 141–146 65 5 0.743* (0.615)
Litopenaeus vannamei M6087
C
F:CTCTCCCTCTCTCCCTCTCC
R:TTTCCCGCGTAATCAGTACC
(CTA)5(TTG)6 264–273 40 2 0.275 (0.276)
Litopenaeus vannamei M39565
C
F:TTTTTCTCTTCCTCCTCCGC
R:CCTCGACCCTTCAGTGTTGT
(TCC)5(TCT)5 255–267 40 5 0.500 (0.488)
Litopenaeus vannamei M2758
C
F:TGTTTTGAATGCAGTGCCA
R:GAGGATTGAAGGCAAACTGC
(TTA)9 254–260 40 3 0.550 (0.538)
Litopenaeus vannamei M2553
C
F:ACAACTGCGCTGGAGAAGAT
R:TGGATAGAGAGAGAGCGGGA
(TAT)13(TTA)5 151–157 40 3 0.550 (0.553)
Litopenaeus vannamei M12585
C
F:CATTAGGATAATGACAGTAATAAGGGT
R:TGATAATGGTAATGGTATTGATAATGA
(ATT)5(ATT)5 143–172 40 3 0.750 (0.592)
Litopenaeus vannamei M2837
C
F:ACTATTCGACGCCTGAGTGG
R:AACAGCGAATCCAGAAGGAA
(AT)8(AT)6(CA)8 191–195 40 3 0.650 (0.649)
Litopenaeus vannamei M12607
C
F:AGCGTAGCACCTCTGCATTT
R:AAGAGGAAGACGAAGGAGGC
(CTC)6 196–206 40 4 0.825 (0.692)
Litopenaeus vannamei M13810
C
F:GACGGTGACTTGAAGGGTGT
R:TGCACCGTCTTTGTAATCCA
(AAG)6(GGA)5 190–202 40 5 0.725 (0.727)
Litopenaeus vannamei M597
C
F:AAAAGAAAGCACACGAAAGG
R:CATCGGAGGCTGCAATTTAT
(CAA)9 174–189 40 6 0.718 (0.732)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
125 126
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Litopenaeus vannamei M13347
C
F:CCATTCTCAAGCCCATTGTT
R:GTTGATGGTGGTGGTTGATG
(TCA)5(ATC)5(ATC)5 203–218 40 6 0.850 (0.749)
Litopenaeus vannamei M56366
C
F:CCTTCAGACTCCAGCATTCC
R:AAACAAACAAACGGCCAAAC
(TTGT)5(GTTT)5 208–221 40 6 0.667 (0.742)
Litopenaeus vannamei M15481
C
F:CCATTCTCATTCTCATTCTCTTTTT
R:AAGATGGCAATTCCAACAGC
(ATA)11 128–143 40 6 0.675 (0.758)
Litopenaeus vannamei M11263
C
F:CTTAATCTTGGAAGCCAGCG
R:CGAAAAACAAGAAGATACAAACGA
(TTG)6(GTG)8 152–179 40 7 0.825 (0.772)
Litopenaeus vannamei M24175
C
F:CAGCTTCCATTTCACGAACA
R:CAAAGAAGATGAAGACATAGGCAA
(TTC)5tttg(TCT)5 150–181 40 7 0.850 (0.785)
Litopenaeus vannamei M21670
C
F:TGCTATCATTACTACCACTGATACTGC
R:TCTCTCGACCCAGTGAAAGG
(ACT)5(TAC)6 217–229 40 5 0.615* (0.788)
Litopenaeus vannamei M47106
C
F:ATGGGCACATGTTCTTAGCC
R:GAAAGTTCAAGGAAAGGGGG
(ATA)5t(TAA)6(A)12 236–258 40 7 0.750 (0.797)
Litopenaeus vannamei M1590
C
F:TCCCTTTGCATCTTGCTCTT
R:GAAGGTGAGGGAAGGGGTAG
(TCA)18 145–178 40 10 0.900 (0.804)
Litopenaeus vannamei M4150
C
F:ACCGGAAAAGATTGCAAAAA
R:GGCTGTATTCATTTTTGGGG
(T)10at(A)10(AT)8 194–221 40 6 0.590 (0.807)
Litopenaeus vannamei M6687
C
F:GAGTTGAAGAAGGAAATGTCGG
R:TTTCTCTTTGCCCATTGTCC
(ATG)8(AGA)5 210–228 40 7 0.625* (0.816)
Litopenaeus vannamei M5476
C
F:GGCGAAGAAATAGCAACCAA
R:TTCGACACGCCTAGTACACG
(AAT)8 264–280 40 7 0.750 (0.826)
Litopenaeus vannamei M9990
C
F:CACGAAGAAGAAGACGAAGGA
R:AGCATAGGCGCTAGAACAGC
(AGA)6ta(AAG)6ata(AAG)6 230–263 40 13 0.875 (0.835)
Litopenaeus vannamei M28899
C
F:ATGGGAAAATGGAGGAAAGG
R:TGGTGGTTTTCCTGTAAGAAGG
(AAT)12(G)11 266–290 40 7 0.625* (0.841)
Litopenaeus vannamei M11975
C
F:TTGTCATTGTTATTGTTATGACTGTTG
R:AACTAGGTCGGGGAAACACC
(CAT)13 118–163 40 9 0.825 (0.841)
Litopenaeus vannamei M17687
C
F:GTTTGGTGAGGTCACGCTCT
R:CGCAAGTTCTTCGCATTCTA
(T)12(TTA)5(TTA)5 224–238 40 7 0.900 (0.841)
Conservation Genet Resour
123
Journal : Large 12686 Dispatch : 7-3-2016 Pages : 44
Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
UNCORRECTED PROOF
127
Species Locus Primer sequence (50–30) Repeat motif Size
range (bp)
Sample
size (N)
Number of
alleles (N
A
)
H
o
(H
e
)
Litopenaeus vannamei M2882
C
F:CGACAGCTGTTGCTCAAGAC
R:AAAAGGTCCTTCGGGAGTGT
(CTC)5t(TCC)6 265–301 40 10 0.900 (0.827)
* Indicates significant deviations from Hardy–Weinberg expectations after Bonferroni corrections
#
Indicates fluorescently labelled M13(-21) primer (50-TGTAAAACGACGGCCAGT-30)
$
Indicates CAG tag (50-CAGTCGGGCGTCATCA-30) label
a
Wang et al. Development and characterization of 42 novel polymorphic microsatellite markers from Synechogobius hasta EST sequences (ESM 1)
b
Wu et al. Isolation and characterization of 22 nuclear microsatellite markers for Platevindex mortoni (Mollusca: Gastropoda:Eupulmonata) based on transcriptome sequencing (ESM 2)
c
He et al. Charazterization of 27 polymorphic microsatellite markers in the Onychostoma sima isolated by next-generation sequencing (ESM 3)
d
Ramos et al. Microsatellite markers for Euterpe precatoria Mart. (Arecaceae) a palm species used by extractive traditional farmers of Amazon (ESM 4)
e
Liang et al. Development and characterization of 36 novel microsatellite loci in Coilia nasus (ESM 5)
f
Bezerra and Gaiotto. Development and characterization of microsatellite markers for Chaetomys subspinosus (Rodentia: Erethizontidae), an endangered species, endemic to the Brazilian
Atlantic Rainforest (ESM 6)
g
Li et al. Development and characterization of 21 microsatellite markers for Spinibarbus caldwelli (Cyprinidae: Spinibarbus) (ESM 7)
h
Li et al. Development and characterization of 24 novel polymorphic microsatellites for the critically endangered plant Taihangia rupestris by transcriptome sequencing (ESM 8)
i
Moniek et al. Characterization of microsatellite markers in the hen harrier (Circus cyaneus) (ESM 9)
j
Zhu et al. Twenty-four novel tetranucleotide microsatellite markers for Epinephelus awoara (ESM 10)
k
Chen et al. Isolation and characterization of 28 polymorphic microsatellite markers of the Pacific seaweed pipefish Syngnathus schlegeli (ESM 11)
l
Gillet et al. Isolation, characterization and PCR multiplexing of polymorphic microsatellite markers in the endangered Pyrenean desman, Galemys pyrenaicus (ESM 12)
m
Li et al. Isolation and characterization of dinucleotide microsatellite repeat in genomic sequence of the orange-spotted grouper (Epinephelus coioides) (ESM 13)
n
Li et al. Development of transcriptome-derived microsatellite markers of the coral trout (Plectropomus leopardus) (ESM 14)
o
Contina et al. Genome-wide identification and characterization of simple sequence repeats in the painted bunting (Passerina ciris) for population and forensic analyses (ESM 15)
p
Viana et al. First set of polymorphic microsatellite markers for Brycon orbignyanus, an endangered Neotropical piracema fish species (ESM 16)
q
Li et al. Isolation and characterization of 36 novel EST-based microsatellite markers for blunt snout bream (Megalobrama amblycephala) based on transcriptome analysis (ESM 17)
r
Lam et al. Development of 24 polymorphic microsatellite loci for the threatened Southern (California) sea otter (Enhydra lutris nereis) (ESM 18)
s
Zhao et al. Development of 43 novel polymorphic microsatellite markers for Takifugu fasciatus and cross amplification in Takifugu xanthopterus (ESM 19)
t
Luo et al. Development of polymorphic microsatellite markers for an endangered fish, lined seahorse (Hippocampus erectus) (ESM 20)
u
Baerwald et al. Development of novel polymorphic microsatellite markers for two bat species affected by wind turbines, hoary bats (Lasiurus cinereus) and silver-haired bats (Lasionycteris
noctivagans) (ESM 21)
v
Liu et al. High-throughput microsatellite development of a migratory fish, Saurogobio dabryi Bleeker, 1871 for landscape ecological and genetic research in the Yangtze Basin (ESM 22)
w
Franc¸oso et al. Microsatellite loci for Tetrapedia diversipes (Hymenoptera: Apidae) (ESM 23)
x
Jiang et al. Fifty new microsatellite markers in the grand jacknife clam Solen grandis (Dunker) isolated via Hiseq 2000 sequencing (ESM 24)
y
Tang et al. Characterization of 30 novel polymorphic genomic microsatellite markers for Boehmeria longispica Steud (ESM 25)
z
Wang et al. Isolation and characterization of microsatellite markers in the ridgetail white prawn Exopalaemon carinicauda (ESM 26)
A
Wen et al. Characterization of 23 polymorphic microsatellites in a marine fish white-spotted snapper (Lutjanus stellatus) (ESM 27)
B
Fu et al. Development of 26 nuclear microsatellites for red-listed endangered herb Sinopodophyllum hexandrum by next-generation sequencing (ESM 28)
C
Yu et al. Characterization of 25 microsatellites for Pacific white shrimp Litopeneaus vannamei (ESM 29)
Conservation Genet Resour
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Article No. : 522 hLE hTYPESET
MS Code : Microsatellite letters vol 8 no 1 hCP hDISK
44
... We extracted genomic DNA using Qiagen DNeasy 96 Plant Kit following the manufacturer's instructions (Qiagen, Germany). We used polymerase chain reaction (PCR) to test 11 microsatellite loci developed for E. precatoria (Arias et al., 2016). After evaluating the size range of each primer separately, we create two PCR multiplexes, one with forward and reverse primers for Ep03, Ep05, Ep08, Ep13, Ep25, and Ep30; and the other with forward and reverse primers for Ep02, Ep06, Ep32, Ep35, Ep36. ...
Preprint
Anthropogenic pressures such as hunting are increasingly driving the localized functional extinctions of all or most large and medium-sized wildlife species in tropical forests, a phenomenon broadly termed defaunation. Concurrently in these areas, smaller-bodied wildlife species benefit from factors such as competitive release and experience population increases. This transformation of the wildlife community can impact species interactions and ecosystem services such as seed dispersal and seed-mediated geneflow with far reaching consequences. Evidence for negative genetic effects following defaunation is well-documented in large-seeded plants that require large frugivores for long distance seed dispersal. However, how defaunation affects small-seeded (< 1.5cm diameter) plants, which are dispersed by frugivores with a wide range of body-sizes and responses to anthropogenic threats, is not well understood. To better understand the reach of defaunation’s impacts on tropical plant communities, we investigated spatial and genetic patterns in a hyperabundant small-seeded palm, Euterpe precatoria in three sites representing distinct defaunation levels. We found significantly higher fine-scale spatial genetic structure among nearest-neighbor seedlings in the defaunated site and in the recovering, partially defaunated site relative to the faunally-intact site. Defaunation was associated with shorter distances between seedlings and adults and lower genetic distance between adult and seedling cohorts. No effects were detected on inbreeding and genetic diversity; however, we caution that trends we detected indicate that defaunation influences the spatial distribution of genetic variation even in small-seeded plants that inherently have a broad suite of seed dispersal agents, and this could lead to negative downstream effects on genetic diversity.
... PCR products were recovered and purified by gel cutting and sequenced by Xiamen Borui Biotechnology Co. (Xiamen, China). A total of 10 microsatellite loci were redesigned from a previous study [43] (Table S1). The 5 ends of all forward primers were labeled with FAM, HEX and ROX fluorescence groups. ...
Article
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The yellow grouper (Epinephelus awoara) is distributed in the West Pacific Ocean. Its genetic structure and demography were investigated using mitochondrial COI, Cyt b, the ND2 gene, the nuclear RyR3 gene, and 10 microsatellite DNA markers. A total of 120 individuals were collected from four locations along the coast of southeastern mainland China. High levels of haplotype diversity (0.968) were observed in mitochondrial DNA, and the average number of alleles ranged from 13.4 to 20.3 in microsatellite DNA data, which showed that all populations exhibited a high level of genetic diversity. Deficiency of heterozygosity was observed in all populations with positive FIS, showing that the characteristics of hermaphroditism might also be an underlying cause. The results of PCA, UPGMA clustering analysis and the significant genetic differentiation found in the Beibu Gulf population revealed the prevention of gene flow caused by the Qiongzhou Strait. The population of E. awoara also presented two major lineages, resulting in the appearance of the land bridge of the Taiwan Strait as a possible factor during the Pleistocene glaciation. Analysis of demographic history revealed that E. awoara underwent a reduction in effective population size in the past, followed by a single instantaneous increase in population size.
... Genomic DNA was extracted from approximately 100 mg of dorsal fin tissue from every sample by standard phenolchloroform protocols. All the samples were genotyped with eleven microsatellite markers, of which Hier-ssr3, Hier-ssr7, Hier-ssr8, Hier-ssr9, Hier-ssr10, Hier-ssr13, Hier-ssr15, Hier-ssr17, Hier-ssr28, and Hier-ssr29 were previously developed by our group (Luo et al., 2015;Arias et al., 2016), and Hier-ssr51 was designed in this study (Supplementary Table S1). The method of PCR amplification and microsatellite analysis referred to Luo et al. (2017). ...
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