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Coral disease literature has focused, for the most part, on the etiology of the more than 35 coral afflictions currently described. Much less understood are the factors that underpin the capacity of corals to regenerate lesions, including the role of colony health. This lack of knowledge with respect to the factors that influence tissue regeneration significantly limits our understanding of the impact of diseases at the colony, population, and community level. In this study, we experimentally compared tissue regeneration capacity of diseased versus healthy fragments of Gorgonia ventalina colonies at 5 m and 12 m of depth. We found that the initial health state of colonies (i.e., diseased or healthy) had a significant effect on tissue regeneration (healing). All healthy fragments exhibited full recovery regardless of depth treatment, while diseased fragments did not. Our results suggest that being diseased or healthy has a significant effect on the capacity of a sea fan colony to repair tissue, but that environmental factors associated with changes in depth, such as temperature and light, do not. We conclude that disease doesn’t just compromise vital functions such as growth and reproduction in corals but also compromises their capacity to regenerate tissue and heal lesions.
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Submitted 13 July 2015
Accepted 3 December 2015
Published 5 January 2016
Corresponding author
Claudia P. Ruiz-Diaz, claudiapatricia-
ruiz@gmail.com
Academic editor
Robert Toonen
Additional Information and
Declarations can be found on
page 10
DOI 10.7717/peerj.1531
Copyright
2016 Ruiz-Diaz et al.
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OPEN ACCESS
The role of coral colony health state in
the recovery of lesions
Claudia P. Ruiz-Diaz1,2, Carlos Toledo-Hernandez2, Alex E. Mercado-Molina2,3,
María-Eglée Pérez4,5and Alberto M. Sabat3
1Environmental Sciences, University of Puerto Rico, San Juan, Puerto Rico
2Sociedad Ambiente Marino SAM, San Juan, Puerto Rico
3Department of Biology, University of Puerto Rico, San Juan, Puerto Rico
4Department of Mathematics, University of Puerto Rico, San Juan, Puerto Rico
5Center for Tropical Ecology and Conservation, CATEC, Río Piedras Campus, University of Puerto Rico,
San Juan, Puerto Rico
ABSTRACT
Coral disease literature has focused, for the most part, on the etiology of the more
than 35 coral afflictions currently described. Much less understood are the factors
that underpin the capacity of corals to regenerate lesions, including the role of
colony health. This lack of knowledge with respect to the factors that influence
tissue regeneration significantly limits our understanding of the impact of diseases
at the colony, population, and community level. In this study, we experimentally
compared tissue regeneration capacity of diseased versus healthy fragments of
Gorgonia ventalina colonies at 5 m and 12 m of depth. We found that the initial
health state of colonies (i.e., diseased or healthy) had a significant effect on tissue
regeneration (healing). All healthy fragments exhibited full recovery regardless of
depth treatment, while diseased fragments did not. Our results suggest that being
diseased or healthy has a significant effect on the capacity of a sea fan colony to repair
tissue, but that environmental factors associated with changes in depth, such as
temperature and light, do not. We conclude that disease doesn’t just compromise
vital functions such as growth and reproduction in corals but also compromises their
capacity to regenerate tissue and heal lesions.
Subjects Ecology, Environmental Sciences, Marine Biology
Keywords Lesion recovery, Sea fans corals, Environmental factors, Recovery techniques,
Coral diseases, Temperature, Healthy state, Depth, Water motion, Health condition
INTRODUCTION
Most of the present-day coral reef habitats no longer exhibit the complex community
structure that was commonly observed several decades ago. This is particularly evident in
the Caribbean where the most important reef species such as the coral-building Caribbean
Acropora palmata,A. cervicornis and the Orbicella complex (formerly Montastraea), and
the predatory reef fish and herbivores such as the black sea urchins and sea fan corals,
have dramatically decreased in abundance (Kim & Harvell, 2002). These losses have
not just changed the seascape of the reefs, but have also caused important ecological
alterations to coral survival, growth and reproductive schedules at local and regional
How to cite this article Ruiz-Diaz et al. (2016), The role of coral colony health state in the recovery of lesions. PeerJ 4:e1531; DOI
10.7717/peerj.1531
scales (Sutherland, Porter & Torres, 2004;Hoegh-Guldberg et al., 2007;Weil, Cróquer &
Urreiztieta, 2009;Burns & Takabayashi, 2011;Ruiz-Diaz et al., 2013).
Of the myriad of stressors affecting the viability of corals, disease is currently ranked at
the top of the list. Coral diseases are typically diagnosed based on changes in the normal
coloration of corals and by the appearance of lesions (partial tissue mortality). Under
severe circumstances, such as when a pathogen is highly virulent or the coral host is
immune-suppressed, disease-induced lesions can increase in size quickly, killing the
colony. However, given a strong immune response, diseased-induced wounds can be
contained and either persist for a prolonged period (if the colony is able to contain the
disease but not regenerate new tissue) or are temporary (if the colony is able to regenerate
tissue over the whole lesion) (Ruiz-Diaz et al., 2013).
Several studies have identified wound characteristic as a major factor affecting the
rate at which a colony can regenerate new tissue and eliminate a lesion. For instance,
several studies agree that regeneration rate decreases with an increase in lesion size (Bak
& Steward-Van, 1980;Oren et al., 2001;Kramrsky-Winter & Loya, 2000). Other studies
suggest that the area/perimeter ratio of a lesion largely governs the rate of wound healing
process (Lirman, 2000). Further studies suggest that wound position within the colony
(i.e., lesions at the edge of the colony vs. lesion at the center of the colony) determine the
wound healing process (Meesters, Bos & Gast, 1992).
Many researchers have also linked the ongoing environmental degradation experienced
by most coral reefs with the advent of coral diseases, which currently is one of the main
sources of lesions on corals. For instance, in a study by Toledo-Hernández, Sabat & Zuluaga-
Montero (2007), the capacity of corals to recover from diseases (i.e., lesion recovery)
was correlated with turbidity and/or sedimentation. Corals in areas with high turbidity
and sedimentation had higher frequencies of disease-induced lesions and larger lesions
compared to corals in less degraded habitats. Higher water temperature has been linked to
the progression of lesions caused by black band disease, which affects several coral species in
the Caribbean and the Great Barrier Reef (Kuta & Richarson, 2002;Haapkylä et al., 2011).
Similarly, nutrient enrichment increased the severity of aspergillosis of Gorgonia ventalina
and yellow band disease on Orbicella annularis and O. franksi (Bruno et al., 2003). Muller
& Woesik (2009) showed that white-plague lesion significantly decreased on Corpophyllia
natans shaded from solar radiation when compared to C. natans without shading. Although
results from these studies have been useful in advancing our understanding of the healing
process on corals, we still lack comprehensive knowledge of how other factors such as the
health state of a colony baring lesion, affect the healing process. However, progress has
been made. For instance, Fine, Oren & Loya (2002) (working with bleached scleractinian
corals) and Ruiz-Diaz et al. (in press) (working with diseased gorgonians) have shown that
diseased corals regenerate man-made lesions slower than man-made lesion inflicted on
healthy-looking corals.
Initiatives to mitigate the effects of coral disease lack information about factors
affecting the recovery of corals from disease-induced lesions. While we do have some
understanding about the factors that make a coral vulnerable to disease (i.e., abnormally
high temperature and sedimentation among others) we lack understanding regarding
Ruiz-Diaz et al. (2016), PeerJ, DOI 10.7717/peerj.1531 2/13
how the health condition of the coral affects its recovery. The objective of this study is to
experimentally test if the health state and variability in environmental factors correlated
with depth, significantly influence lesion regeneration on the sea fan G. ventalina. To do
this, we established eight nursery lines at two depths within the same reef (four nursery
lines per depth, 5 m and 12 m). Each nursery line consisted of four fragments from two
healthy and two diseased G. ventalina colonies. We scraped tissue from some of the healthy
fragments and scraped the diseased area of the diseased fragments and followed their
recovery through time. Concomitantly, we measured the temperature and light intensity at
both depths (5 m and 12 m) to document differences in these factors between depths. We
hypothesized that fragments from healthy colonies would regenerate new tissue at a faster
rate than those from diseased colonies because, at the start of the experiment, diseased
colonies are expected to have an activated immune response and thus fewer resources to
allocate to tissue regeneration than healthy ones. We also reasoned that, independent of
health state, tissue recovery rate at 12 m would be slower than at 5 m due to reduced light
availability.
METHODS
Study site
The experiment was conducted in Cayo Largo reef (CL) from April to August 2013. CL is
located 6.5 km off the northeastern coast of Puerto Rico (N1819.0904200W6535.0107500 ).
CL is a patch reef with a coral assemblage dominated by large colonies of Gorgonia ventalina,
Pseudopterogorgia acerosa and small colonies of the Orbicella annularis, Acropora palmata
and Porites astreoides (for further description of the study area, see Hernández-Delgado et
al. (2006)). The tissue samples were collected under permit 2012-IC-086 issued to Claudia
P. Ruiz Diaz, University of Puerto Rico (UPR) Rio Piedras campus, given by the Puerto
Rico Department of Natural Resources, Commonwealth of Puerto Rico.
Experimental design
Nursery lines
A total of eight nursery lines, each of 2.7 m in length and 1 m above the bottom, were
established at two depths: 5 m and 12 m (hereafter shallow and deep zones, respectively)
at CL (Fig. 1). Four of these nursery lines were established at the shallow zone and the
remaining four at the deep zone. To setup the nursery lines, we collected tissue fragments
from 16 sea fan colonies (fragment donor colonies) inhabiting an area of about 800 m2
and at depths between 1–1.5 m. Given that sea fans do not exhibit asexual reproduction,
selected colonies are assumed to be genetically distinct from each other. Eight of the
fragment donor colonies were diagnosed as healthy i.e., fans showing no visual sign of
disease or tissue purpling; the remaining eight donor colonies were diagnosed as diseased
i.e., fans showing an area colonized by fouling organisms, mainly algae, with a purple tissue
ring surrounding the over grown (Fig. 2). Once collected, each health fragment was split
in two identical halves of approximately 165.5 cm2, one of which was placed on a shallow
nursery line and the other on a deep nursery line. Diseased fragments were split so that
the lesion represented approximately 16% of the total surface area of each fragment. Once
Ruiz-Diaz et al. (2016), PeerJ, DOI 10.7717/peerj.1531 3/13
Figure 1 Nursery line of the Gorgonia ventalina fragments with treatment enumerated. 1, 5, 9, 13,
are healthy fragments (HF). Numbers 2, 6, 10 and 14 are scrapped healthy fragments (HFS). Numbers 3,
7 and 15 are diseased fragments (DF). Numbers 4, 8, 12 and 16 are scrapped diseased fragments (DFS).
Light green represents healthy tissue, black oval represents exposed skeleton from experimental scraping,
and violet oval represents lesion.
split, one half-fragment from the same donor colony was placed at a shallow nursery lines
and the other half at a deep nursery line. Once fully assembled, each nursery line consisted
of four colony fragments (two healthy and two diseased) separated by 30 cm each (Fig. 1).
Note that no two fragments from the same colony were placed in the same nursery line
nor at the same depth.
Tissue scraping
Tissue scraping was performed to measure the capacity of fragments to regenerate tissue
under contrasting health states and environmental conditions. We scraped tissue from one
of the healthy and diseased fragments per nursery line, per depth (hereafter HFS and DFS,
respectively) (Fig. 1). In the case of HFS fragments, the equivalent of ten percent of the
total surface area was scraped from the center of the fragment. For DFS fragments, the total
injured area (the area overgrown by fouling organisms plus the purpled tissue) was scraped.
Scraping was performed using a metal bristle brush and resulted in the exposure of the
axial skeleton in both cases. The remaining healthy and diseased fragments, (hereafter HF
and DF respectively), were not subjected to any tissue scraping (Fig. 1). HF fragments were
used as sentinels. Tissue mortality in these fragments would signal either an adverse effect
of fragmentation or too harsh environmental conditions both of which would invalidate
Ruiz-Diaz et al. (2016), PeerJ, DOI 10.7717/peerj.1531 4/13
Figure 2 Example of wound-healing process. Close-up pictures of scraped healthy individuals showing
the healing process over the course of the experiment.
the experiment. HFS and DFS fragments were included to address the main objective of
the study, which is to test the effect of health state on tissue generation. DF are disease
fragments with filamentous algae or other fouling growing in the expose skeleton. They
were added to the experiment to measure the ‘‘natural’’ regeneration rate of tissue growing
over skeleton covered by fouling organisms or/and pathogen(s).
Ruiz-Diaz et al. (2016), PeerJ, DOI 10.7717/peerj.1531 5/13
Tissue regeneration estimates
To document the progression of the wound-healing process, close-up pictures of each
fragment were taken every two weeks between April and August 2013 or until lesions
healed completely. Lesions were deemed healed (fully recovered), if the bare skeleton was
completely covered by healthy tissue. The percent area of the lesion that did recovered
at the end of the experiment was estimated by subtracting the area without soft tissue
measured at the end of the experiment to the area (bared axial skeleton) measured at the
beginning of the experiment, just after scraping the lesion. Image analysis software (Sigma
Scan Pro Image Analysis version 5.0 Software) was used to measure all individual and clone
fragments. These measurements were validated using in situ measurements.
Environmental variables
To quantitatively determine if environmental conditions differed at each depth (5 m and
12 m), we measured the water temperature and light intensity. Temperature and light were
measured using one Hobo Pendant temperature/light data logger 64k-UA-002-64 (Onset
Company) at each depth. Data loggers were secured in place using metal rods and a zip tie.
Temperature measurements were recorded every 15 min for 14 days from April 26 to May
3, May 16 to June 7, June 28 to July 12, and August 9 to August 23, 2013. Light intensity
data was obtained only during the first 10 days after the loggers were placed, as seaweeds
typically colonize the logger and affect the readings (C Ruiz-Diaz, pers. obs., 2013).
Statistical analysis
Lesion recovery was expressed as the rate at which tissue regenerated (in cm2) through
time. This can be represented as the slope of a linear regression with time (in days) in
the x-axis and lesion area in the y-axis (log transformed) (Meesters, Bos & Gast, 1992). To
determine whether depth (5 m and 12 m) and fragment treatments (DF DFS, and HFS)
had an effect on the tissue regeneration through time, the slope of each fragment was
analyzed using a repeated measure ANOVA, as fragments from the same colony (placed
at the shallow and deep nursery lines) are not independent from each other. Statistical
analyses were performed using R version 3.1 (R Core Team 2014).
RESULTS
Environmental variables and recovery
Light intensity and temperature showed statistical differences between depths (see Table 1).
Average temperature at 5 m was 28.555 ±0.012 C (mean ±SE), while at 12 m it was
28.334 ±0.006 C. Average light intensity at 5 m was 11203.55 ±459.410Lux, while at 12 m
it was 3429.36 ±129.11Lux.
Tissue recovery
All the healthy sentinel fragments (HF) survived the experiment without any necrosis; in
fact, fragments increased in size at both depths. The results from the repeated measure
ANOVA analysis performed showed that tissue recovery was only affected by fragment’s
health state (F2,15 =5.477, p=0.0317). Depth (F1,15 =3.587, p=0.095) and the interaction
between depth and health state showed no significant differences (F5,15 =3.915, p=0.065;
Ruiz-Diaz et al. (2016), PeerJ, DOI 10.7717/peerj.1531 6/13
Table 1 t-test statistics for light intensity and temperature for different time periods for both the shal-
low and deep sites. The experimental period lasted between April 26 to August 23, 2014.
April 26–May 3 May 16–June 7 June 28–July 12 August 9–August 23
Light intensity t=15.13 t=15.52 t=17.58 t=17.53
df =363.40 df =992.63 df =902.61 df =897.81
p<0.001 p<0.001 p<0.01 p<0.001
Temperature t=10.42 t=17.50 t=12.87 t=26.72
df =838.22 df =3541.62 df =2274.34 df =3051.96
p<0.001 p<0.001 p<0.01 p<0.001
Figure 3 Boxplots showing the slopes (rate at which tissue regenerated through time) between health
state treatments (healthy and diseased) and fragments. The boxplot median is represented by the bold
line, the extremes of the box are the 1st and 3rd quartile and the whiskers are the maximum and mini-
mum. DF, diseased fragments; DFS, diseased fragments scrapped; HFS, healthy fragments.
Fig. 3B). The results of the Tukey HSD analysis showed significant differences between
DFS and HFS (diff = 0.020, p=0.001) and DFS and DF (diff = 0.015, p=0.016).
DISCUSSION
Coral colonies are very vulnerable to tissue loss due to predation, pathogens, and abrasion,
among other factors. Failure to regenerate lost tissue could impair their survivorship by
allowing potentially harmful organisms to settle in the exposed skeleton, further infecting
healthy areas of the corals. Repair failure could also affect other vital function of corals such
the heterotrophic feeding and ultimately growth, in addition to reproduction, as loss of
polyps will negatively affect such activities. Thus, tissue regeneration should be of utmost
importance in order for coral colonies to reduce the risk of diseases, thereby improving
their survivorship, competitive capacity and ultimately reproduction and somatic growth.
Numerous researchers have studied the link between environmental factors, and the
frequency and severity of coral diseases. In fact, some of these studies have argued that
as climate change continues to exacerbate these factors, so will be the physiological stress
associated with it, and that consequently the frequency and severity of coral disease, will also
Ruiz-Diaz et al. (2016), PeerJ, DOI 10.7717/peerj.1531 7/13
increase (Kuta & Richarson, 2002;Haapkylä et al., 2011;Cróquer et al., 2006;Williams et
al., 2014). In comparison, studies addressing how the health state of corals affects the coral’s
capacity to repair are by far less common (however, see Mascarelli & Bunkley-William, 1999;
Fine, Oren & Loya, 2002;Ruiz-Diaz et al., in press). This study is an attempt to address this
knowledge gap by documenting the relationship between the recovery dynamics of healthy
and diseased coral colonies and environmental factors such as temperature, light intensity
while controlling for genetic variability.
Effect of the state of coral health on lesion recovery
This study shows that the health state of colonies (i.e., being diseased or healthy) has a
significant effect on the tissue repair capacity of sea fans. All healthy fragments, regardless
of the depth where they were placed (thus regardless of temperature and light regimes),
exhibited full recovery whereas diseased fragments did not. Furthermore, scraped healthy
fragments healed faster than scraped diseased fragments (i.e., on average 78 days vs. 97 days,
respectively). It is possible that genetic differences among colonies, which may have lead to
different levels of susceptibility to disease in the first place, might have lead to the observed
differences in healing rate. However, the result is that unscraped diseased fragments (DF)
healed at a significantly slower rate than scraped ones (DFS) supports that tissue with
lesion cannot heal as fast as tissue without a lesion even if they come from the same colony.
In other words, growing tissue over a skeleton covered with fouling organisms is a slower
process because it is more costly, as the coral is competing for space and also allocating
resources into tissue regeneration. By contrast, scraped fragments can allocate resources
into tissue regeneration.
The results of the experiment agree with our initial hypothesis, which stated that
the health state does affect the capacity of fragments to recover. In fact, our results
show that being diseased negatively affects the capacity of fragments to recover. These
results also concur with several authors who have argued that the diseased condition
negatively affects the tissue regeneration capacity of corals. For instance, Mascarelli &
Bunkley-William (1999) compared the rates of tissue regeneration of Orbicela annularis
corals under contrasting health conditions (healthy and artificially bleached fragments)
and reported that healthy ramets did not just heal completely but also recovered faster than
diseased ones. By contrast, two of the bleached ramets died, and the remaining fragments
did not exhibit full recovery. Likewise, Ruiz-Diaz et al. (in press) scraped naturally occurring
lesions from sea fan colonies and as control scraped the equivalent of 10% of the surface
area of healthy sea fan colonies, and found that tissue recovery was significantly slower in
diseased fans when compared to healthy fans. A plausible explanation for these differences
is that diseased colonies have fewer resources to invest into tissue repair as their resources
were already compromised by the immune response prior to scraping (Nagelkerken et
al., 1997). Further evidence in support of this explanation of resource limitation would
have been obtained by contrasting regeneration rates of healthy fragments from diseased
colonies with that of diseased and healthy fragments from healthy colonies; however, we
did not included healthy fragments from diseased colonies in our experimental design.
Corals, like all living organisms, have finite resources to allocate into several vital functions
Ruiz-Diaz et al. (2016), PeerJ, DOI 10.7717/peerj.1531 8/13
such as growth, reproduction, immune defense or lesion regeneration. Given these resource
constraints, the allocation of resources into certain vital functions, such as immune defense,
means that fewer resources could be available for lesion regeneration (Oren et al., 2001).
Several studies conducted on a variety of corals support this hypothesis. For instance,
Petes et al. (2003) working on sea fan coral G. ventalina reported reproductive suppression
in diseased colonies, presumably due to a shift in resource allocation from reproduction
to immunity. Similarly, Palmer, Bythell & Willis (2010) suggest that Porites sp. invests
considerably more resources into immune constituents such as melanin biosynthesis than
A. millepora. This investment of resources into immunity provides Porites with a higher
disease and bleaching resistance. By contrast, A. millepora invests more resources into
growth compared to Porites, although at a cost in reduced immunity, as acroporids are
among the corals most susceptible to bleaching and disease.
Effect of depth on lesion recovery
One of the main concerns of the scientific community is that changes in environmental
conditions could induce physiological stress on corals (Alker et al., 2004). These stresses
could impair vital life history traits such as grow, reproduction or even the capacity of corals
to recover after a disturbance. In our study, however, environmental factors associated
with changes in depth, showed no evident effects on the capacity of sea fan fragments
to regenerate tissue, even though, the parameters measured were statistically different
between depths. Our failure to detect depth effects could have several explanations, not
necessarily mutually exclusive. For instance, it could be possible that the difference
in environmental factors recorded between 5 m and 12 m were not sufficient to
induce physiological stresses on the fragments, thereby not precluding their capacity
to regenerate tissue. Alternatively, it could be that there was a depth effect but it
manifested on other life history traits such as reproduction or somatic growth, in which
case we were not able to detect it. It is also plausible to argue that sea fans are rather
tolerant to changes in environmental conditions. Indeed, Ruiz-Diaz et al. (in press) found
no differences in tissue recovery of in G. ventalina inhabiting reefs with contrasting
water quality.
CONCLUSIONS
Diseases of corals not just compromise vital functions such as growth and reproduction, but
also compromise their recovery capacity. Arguably, resources invested against pathogens
could also be the same driving the tissue repair as stated by limited budget theory proposed
by Oren et al. (2001). This raises questions regarding the sharing of resources and resource
depletion. For instance, in the eventuality of two simultaneous but different immunological
insults, how corals should prioritize its resources to respond to both events? How intense
should a disturbance be in order to induce immune responses that affect several life history
traits? It that regard, it could be possible that the environmental conditions in this study
may have indeed caused stress on the sea fan fragments, but these stresses were manifested
in other vital functions such as reproduction or growth which were not studied in this
work. Our study also shows that sea fans are very robust corals which can tolerate variable
Ruiz-Diaz et al. (2016), PeerJ, DOI 10.7717/peerj.1531 9/13
environmental conditions; this may explain why this species thrives relatively well in many
coral reefs across Puerto Rico regardless of environmental degradation.
ACKNOWLEDGEMENTS
Ruber Rodríguez and Francisco J. Soto for field assistance, and Paul Furumo, Molly
Ramsey, Cheryl Woodley and Misaki Takabayashi for their critical reviews.
ADDITIONAL INFORMATION AND DECLARATIONS
Funding
This study was supported in part by institutional funds of the UPR-RP, UPR Sea Grant
(NOAA award NA10OAR41700062, project R-92-1-10) and UPR-Sea Grant (Seedmoney)
to C.P.R-D and the Puerto Rico Center for Environmental Neuroscience (NSF grant HRD
#1137725). The funders had no role in study design, data collection and analysis, decision
to publish, or preparation of the manuscript.
Grant Disclosures
The following grant information was disclosed by the authors:
UPR-RP, UPR Sea Grant: NA10OAR41700062.
UPR-Sea Grant (Seedmoney) to C.P.R-D and Puerto Rico Center for Environmental
Neuroscience: #1137725.
Competing Interests
The authors declare there are no competing interests.
Author Contributions
Claudia P. Ruiz-Diaz performed the experiments, analyzed the data, contributed
reagents/materials/analysis tools, wrote the paper, prepared figures and/or tables,
reviewed drafts of the paper, guided all the work of the manuscript.
Carlos Toledo-Hernandez and Alberto M. Sabat conceived and designed the experiments,
performed the experiments, analyzed the data, contributed reagents/materials/analysis
tools, wrote the paper, reviewed drafts of the paper.
Alex E. Mercado-Molina conceived and designed the experiments, performed the
experiments, wrote the paper, reviewed drafts of the paper.
María-Eglée Pérez performed the experiments, contributed reagents/materials/analysis
tools, reviewed drafts of the paper.
Field Study Permissions
The following information was supplied relating to field study approvals (i.e., approving
body and any reference numbers):
The tissue samples were collected under permit 2012-IC-086 issued to Claudia P. Ruiz
Diaz, University of Puerto Rico (UPR) Rio Piedras campus, given by the Puerto Rico
Department of Natural Resources, Common Wealth of Puerto Rico.
Ruiz-Diaz et al. (2016), PeerJ, DOI 10.7717/peerj.1531 10/13
Data Availability
The following information was supplied regarding data availability:
The research in this article did not generate any raw data.
Supplemental Information
Supplemental information for this article can be found online at http://dx.doi.org/10.7717/
peerj.1531#supplemental-information.
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... Acropora cervicornis clusters composed of several individuals. For a further description of the study area please seeHernandez-Delgado et al. (2006), Mercado-Molina et al. (2015) and Ruiz-Diaz et al. (2016. Within this site, six A. cervicornis colonies were collected in August of 2015. ...
... Temperature and light intensities were estimated by placing one Hobo Pendant temperature/light data logger 64k-UA-002-64 (Onset Company) per depth at the study site at the time of collection. Although we do not have multiple log readings per site, a previous study conducted by the current authors in the same collection sites found that the temperature and light were significantly different between the two depths (Ruiz-Diaz et al., 2016). Collected fragments were 6 cm in length from the tip of the colonies. ...
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Background Coral reefs are the most biodiverse ecosystems in the marine realm, and they not only contribute a plethora of ecosystem services to other marine organisms, but they also are beneficial to humankind via, for instance, their role as nurseries for commercially important fish species. Corals are considered holobionts (host + symbionts) since they are composed not only of coral polyps, but also algae, other microbial eukaryotes and prokaryotes. In recent years, Caribbean reef corals, including the once-common scleractinian coral Acropora cervicornis , have suffered unprecedented mortality due to climate change-related stressors. Unfortunately, our basic knowledge of the molecular ecophysiology of reef corals, particularly with respect to their complex bacterial microbiota, is currently too poor to project how climate change will affect this species. For instance, we do not know how light influences microbial communities of A. cervicornis , arguably the most endangered of all Caribbean coral species. To this end, we characterized the microbiota of A. cervicornis inhabiting water depths with different light regimes. Methods Six A. cervicornis fragments from different individuals were collected at two different depths (three at 1.5 m and three at 11 m) from a reef 3.2 km off the northeastern coast of Puerto Rico. We characterized the microbial communities by sequencing the 16S rRNA gene region V4 with the Illumina platform. Results A total of 173,137 good-quality sequences were binned into 803 OTUs with a 97% similarity. We uncovered eight bacterial phyla at both depths with a dominance of 725 Rickettsiales OTUs (Proteobacteria). A fewer number (38) of low dominance OTUs varied by depth and taxa enriched in shallow water corals included Proteobacteria (e.g. Rhodobacteraceae and Serratia ) and Firmicutes ( Streptococcus ). Those enriched in deeper water corals featured different Proteobacterial taxa (Campylobacterales and Bradyrhizobium) and Firmicutes ( Lactobacillus ). Discussion Our results confirm that the microbiota of A. cervicornis inhabiting the northeastern region of Puerto Rico is dominated by a Rickettsiales-like bacterium and that there are significant changes in less dominant taxa at different water depths. These changes in less dominant taxa may potentially impact the coral’s physiology, particularly with respect to its ability to respond to future increases in temperature and CO2.
... Because of the energetic demand associated with lesion recovery, coral health can also play a key role (Fine et al. 2002;Fisher et al. 2007;Ruiz-Diaz et al. 2016). Relating coral tissue recovery to the physical environment directly is less frequent (Nagelkerken et al. 1999;Sabine et al. 2015), and in these cases, recovery can be delayed or even halted by stressful events during or immediately before recovery (Henry and Hart 2005;Meesters and Bak 1993;Meesters et al. 1994). ...
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... These processes are affected by environmental and biological conditions (Bak & Steward-Van Es, 1980;Bossert et al., 2013;Hall et al., 2015;Henry & Hart, 2005;Highsmith, 1982;Meesters & Bak, 1993;Sabine et al., 2015), such as temperature (Burmester et al., 2017;Dias et al., 2018;Kramarsky-Winter & Loya, 2000;Luz et al., 2018), health state (Ruiz-Diaz et al., 2016), and metabolic state (e.g., starving condition- Burmester et al., 2018;Galliot et al., 2018;Luz et al., 2018;Tomczyk et al., 2017). Ultimately these processes reflect the balance between energy cost and available cellular resources against other "investments," such as reproduction and somatic growth (Henry & Hart, 2005;Kramarsky-Winter & Loya, 2000;Lai & Aboobaker, 2018;Poss, 2010;Sebestyén et al., 2018). ...
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... Other factors could affect the ability of units within a colonial organism to share resources. Corals in different environments can exhibit different regeneration times (e.g., Lester and Bak 1985;Sabine et al. 2015) and stressors such as sedimentation (Sheridan et al. 2014) and disease (Ruiz-Diaz et al. 2016), can reduce the overall health of the colony and therefore decrease the resources that neighbors have available to heal damaged units, and would therefore decrease the ability of the colony to recover from a damage event. For example, studies tracking isotopes demonstrated that bleached corals have lower connectivity [i.e., fewer isotopes were transported across the colony (Fine et al. 2002)], and lower rates of lesion healing, compared to unbleached colonies (Meesters and Bak 1993;Fine et al. 2002). ...
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... Nonetheless, regeneration processes are species-specific and triggered under certain environmental and biological conditions (Bak and Steward-Van Es, 1980;Bossert et al., 2013;Hall et al., 2015;Highsmith, 1982;Lea-Anne et al., 2005;Meesters and Bak, 1993;Sabine et al., 2015), such as temperature (Kramarsky-Winter and Loya, 2000) and colony health state (Ruiz-Diaz et al., 2016). Under such circumstances, coral species can exhibit higher regeneration rates and consequently invasive success, factors that need to be taken into account during attempts to manage their spread (Casado et al., 2014;Kramarsky-Winter and Loya, 1996). ...
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... The corals assemblage at the collection site is dominated by gorgonian Temperature and light intensities were estimated by placing one Hobo Pendant temperature/light data logger 64k-UA-002-64 (Onset Company) per depth at the study site at the time of collection. Although we do not have multiple log readings per site, a previous study conducted by the current authors in the same collection sites found that the temperature and light were significantly different between the two depths ( Ruiz-Diaz et al., 2016). Collected fragments were 6 cm in length from the tip of the colonies. ...
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Background. Coral reefs are the most biodiverse ecosystems in the marine realm, and they not only contribute a plethora of ecosystem services to other marine organisms, but they also are beneficial to humankind via, for instance, their role as nurseries for commercially important fish species. Corals are considered holobionts (host + symbionts) since they are composed not only of coral polyps, but also algae, other microbial eukaryotes and prokaryotes. In recent years, Caribbean reef corals, including the once-common scleractinian coral Acropora cervicornis, have suffered unprecedented mortality due to climate change-related stressors. Unfortunately, our basic knowledge of the molecular ecophysiology of reef corals, particularly with respect to their complex bacterial microbiota, is currently too poor to project how climate change will affect this species. For instance, we do not know how light influences microbial communities of A. cervicornis, arguably the most endangered of all Caribbean coral species. To this end, we characterized the microbiota of A. cervicornis inhabiting water depths with different light regimes. Methods. Six A. cervicornis fragments from different individuals were collected at two different depths (three at 1.5 m and three at 11 m) from a reef 3.2 km off the northeastern coast of Puerto Rico. We characterized the microbial communities by sequencing the 16S rRNA gene region V4 with the Illumina platform. Results. A total of 173,137 good-quality sequences were binned into 803 OTUs with a 97% similarity. We uncovered eight bacterial phyla at both depths with a dominance of 725 Rickettsiales OTUs (Proteobacteria). A fewer number (38) of low dominance OTUs varied by depth and taxa enriched in shallow water corals included Proteobacteria (e.g. Rhodobacteraceae and Serratia) and Firmicutes (Streptococcus). Those enriched in deeper water corals featured different Proteobacterial taxa (Campylobacterales and Bradyrhizobium) and Firmicutes (Lactobacillus). Discussion. Our results confirm that the microbiota of A. cervicornis inhabiting the northeastern region of Puerto Rico is dominated by a Rickettsiales-like bacterium and that there are significant changes in less dominant taxa at different water depths. These changes in less dominant taxa may potentially impact the coral's physiology, particularly with respect to its ability to respond to future increases in temperature and CO2.
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Coral diseases are currently playing a major role in the worldwide decline in coral reef integrity. One of the coral species most afflicted by disease in the Caribbean, and which has been the focus of much research, is the sea fan Gorgonia ventalina. There is, however, very little information regarding the capacity of sea fans to recover after being infected. The aim of this study was to compare the rehabilitation capacity of G. ventalina after diseased-induced lesions were eliminated either by scraping or extirpating the affected area. Scraping consisted of removing any organisms overgrowing the axial skeleton from the diseased area as well as the purple tissue bordering these overgrowths using metal bristle brushes. Extirpation consisted of cutting the diseased area, including the surrounding purpled tissue, using scissors. The number of scraped colonies that fully or partially rehabilitated after being manipulated and the rates at which the sea fans whose lesions were scrapped grew back healthy tissue were compared among: (i) colonies that inhabited two sites with contrasting environmental conditions; (ii) colonies of different sizes and (iii) colonies with different ratios of area of legions to total colony area (LA/CA). Both strategies proved to be very successful in eliminating lesions from sea fans. In the case of scraping, over 51% of the colonies recovered between 80% and 100% of the lost tissue within 16 months. The number of colonies that recovered from scraping was similar among sites and among colony sizes, but differed significantly depending on the relative amount of lesion to colony area (LA/CA). When lesions were extirpated, lesions did not reappear in any of the colonies. We conclude that lesion scraping is useful for eliminating relatively small lesions (i.e. LA/CA < 10%), as these are likely to recover in a shorter period of time, whereas for relatively large lesions (LA/CA ≥ 10%) it is more appropriate to extirpate the lesion.
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The prevalence and severity of marine diseases have increased over the last 20 years, significantly impacting a variety of foundation and keystone species. One explanation is that changes in the environment caused by human activities have impaired host resistance and/or have increased pathogen virulence. Here, we report evidence from field experiments that nutrient enrichment can significantly increase the severity of two important Caribbean coral epizootics: aspergillosis of the common gorgonian sea fan Gorgonia ventalina and yellow band disease of the reef-building corals Montastraea annularis and M. franksii. Experimentally increasing nutrient concentrations by 2–5· nearly doubled host tissue loss caused by yellow band disease. In a separate experiment, nutrient enrichment significantly increased two measures of sea fan aspergillosis severity. Our results may help explain the conspicuous patchiness of coral disease severity, besides suggesting that minimizing nutrient pollution could be an important management tool for controlling coral epizootics.
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Diseases threaten the structure and function of marine ecosystems and are contributing to the global decline of coral reefs. We currently lack an understanding of how climate change stressors, such as ocean acidification (OA) and warming, may simultaneously affect coral reef disease dynamics, particularly diseases threatening key reef-building organisms, for example crustose coralline algae (CCA). Here, we use coralline fungal disease (CFD), a previously described CCA disease from the Pacific, to examine these simultaneous effects using both field observations and experimental manipulations. We identify the associated fungus as belonging to the subphylum Ustilaginomycetes and show linear lesion expansion rates on individual hosts can reach 6.5 mm per day. Further, we demonstrate for the first time, to our knowledge, that ocean-warming events could increase the frequency of CFD outbreaks on coral reefs, but that OA-induced lowering of pH may ameliorate outbreaks by slowing lesion expansion rates on individual hosts. Lowered pH may still reduce overall host survivorship, however, by reducing calcification and facilitating fungal bio-erosion. Such complex, interactive effects between simultaneous extrinsic environmental stressors on disease dynamics are important to consider if we are to accurately predict the response of coral reef communities to future climate change.
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The fungal pathogen Aspergillus sydowii is causing high mortality of sea fan gorgonians Gorgonia ventalina in a Caribbean-wide outbreak. Fungal infection induces a localized band of melanin adjacent to fungal hyphae. We also detected an unidentified parasite that induced a similar melanin band, suggesting that melanization is a generalized response to infection. Although a common mechanism of antifungal defense in insects, this is the first report of melanization in a cnidarian. Histological analysis also revealed that sea fans are gonochoric, and reproduction was suppressed in fungus-infected colonies throughout the year. Fans infected with the fungus contained few or no gametes in comparison to fecund healthy fans. Every fan with fungal lesions covering between 10 and 20 % of fan area was reproductively compromised; 64 % of infected fans were reproductively inactive. Since prevalence of infection increases with increasing colony size, compromised reproductive of the largest, most fecund fans will amplify the epizootiological and selective impacts of this outbreak. This new evidence suggesting reproductive suppression in diseased gorgonians indicates that demographic costs may occur for those populations surviving disease outbreaks.
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Large lesions and widespread tissue loss in the sea fans Gorgonia ventalina and G. flabellum L. occurred throughout most of the Caribbean during 1995 and 1996. An earlier study identified the putative pathogen as a fungus in the genus Aspergillus (Smith et al. 1996). Repeated surveys showed that in the Bahamas the incidence (= % pf diseased sea fans) and virulence (= % tissue loss per diseased colony) of the disease increased rapidly from 1995 to 1996. Repeated surveys in Curacao and Saba showed Little variation in incidence and virulence. Incidence of the disease was higher on larger than on smaller colonies. On sheltered or moderately exposed shallow reefs (<12 m), both incidence and virulence were positively correlated with water depth. The number of lesions on diseased sea fans, measured only in Curacao, also increased with depth. These patterns may result from a decrease in wave action, which usually declines with water depth, and the consequent reduction in the swaying motion of the sea fans, thus affecting success of pathogen attachment and establishment. The sea fan predator snail Cypohoma gibbosum was more abundant on diseased than on healthy colonies but its density appears to have been too low to contribute significantly to infection and tissue loss. Algal tumors were found on both healthy and diseased colonies and showed no clear association with the disease.
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The regeneration of lesions caused by the fragmentation of Acropora palmata colonies was examined in the northern Florida Reef Tract, USA. The recovery of A. palmata lesions followed a negative exponential model. Lesion regeneration was influenced by the initial size and perimeter of lesions, but was not affected by the presence of colonizers or the size of the colonies or fragments bearing the lesions. Significant differences in regeneration rates were found among small (0-5 cm(2)), medium (5-10 cm(2)), and large (10-20 cm(2)) lesions. The largest lesions (120 cm(2)) did not show a significant recovery over time. When the total area recovered during the first 30 d was normalized to initial perimeter length, both small and large lesions regenerated similar amounts of tissue. However, closure rates (the rate of movement of the growing lip towards the center of the lesion) were significantly faster for small lesions (7.3 [SE = 1.3] mm mo(-1)) compared to medium (4.9 [0.4] mm mo(-1)) and large (4.3 [0.3] mm mo(-1)) lesions. Results of this study support previous studies suggesting that the regeneration process is sustained by a limited, initial amount of energy that may be determined by the extent of damage experienced by the colony.
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Modular organisms consist of repeated building blocks. An important consequence of modularity may be reflected in the ability of a colony to continually reallocate priority of resource transport among its units in response to stress. Hermatypic corals, the main organisms constructing tropical reefs, are prone to damage by a multitude of agents. Since colonization of lesions bY competitors is a potent threat to colonial organisms, fast recovery is an important component of colony survival. Previous regeneration studies have claimed that the energy requirements of this essential process are fueled only by the polyps directly bordering the injured area. This "localized regeneration hypothesis" rejects the necessity for wide colony integration during regeneration and sees no advantage to large colony size. The objective of the present study was to test an alternative regeneration hypothesis that argues, in contrast, that injury repair (i.e., closure of lesions by newly formed tissues) in corals may require extended colony integration (i.e., internal translocation of resources from sites of acquisition to sites of maximal demand). To test our hypothesis we examined: (1) the relationship between colony size and percentage recovery of lesions differing in size and shape; and (2) the effect of different sized lesions on the fecundity of polyps located at increasing distances from the lesion site. Both experiments were conducted on the common, spherically shaped coral Favia favus in the Red Sea near Eilat, Israel. The relatively small lesions (< 1 cm 2) were the only ones to support the localized regeneration hypothesis, since their recovery was unaffected by colony size. However, the two larger lesion types (approximate sizes of 2 cm 2 and 3 cm 2) confirmed the importance of large colony size for achieving fast recovery. In the second experiment we found that small lesions, repeated monthly, caused only a localized reduction in fecundity, while larger monthly repeated lesions caused significant reductions in fecundity up to a distance of 15 cm away from their site. Both experiments indicate that regeneration from injury may require an extended magnitude of energy integration throughout the colony, and that the extent of this integration is regulated by the colony in accordance with lesion characteristics. It is also concluded that in long-lived organisms such as corals, there is a priority of energy allocation to recovery rather than to reproduction. Our findings reveal the existence of injury thresholds within a colony that determine energy allocation and intra-colonial translocation of energy products toward regions of maximal demand. We suggest that such injury thresholds may characterize many other coral species and that colony integration during stress is a basic life-preserving ability and one of the most important advantages of clonal and colonial organisms.
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Since the mid-1990s, coral diseases have increased in number, species affected, and geographic extent. To date, 18 coral diseases, affecting at least 150 scleractinian, gorgonian, and hydrozoan zooxanthellate species, have been described from the Caribbean and the Indo-Pacific. These diseases are associated with pathogens including bacteria, cyanobacteria, fungi, and protists and with abiotic stressors including elevated seawater temperature, sedimentation, eutrophication, and pollution. Etiologies of only 5 of the 18 coral diseases have been determined through fulfillment of Koch's postulates. Corals and other invertebrates utilize innate immune mechanisms including physiochemical barriers and cellular and humoral defenses against pathogens. Here we review the described coral diseases, known etiologies, and efforts to determine unknown etiologies. We define disease terms, discuss the limitations of Koch's postulates, describe alternative techniques for identifying disease-causing organisms, and review coral immunology.