Aim: Early experiments have proved that acupuncture has better curative effect in treating migraine. In this study, we explore the regulatory effect of acupuncture on the expression of 5-hydroxytryptamine1F (5-HT1F) and inducible nitricoxide synthase (iNOS) in brain of rats with migraine. Methods: The experiment was conducted at the laboratory of Integrative Traditional and Western Medicine Institute, Xiangya Hospital Affiliated to Central South University from November 2005 to May 2006. 1 Forty SD rats were randomly divided into 4 groups (n =10). The model of migraine was established in all rats except control group. Additionally, acupuncture treatment group was acupunctured at bilateral Taichong and Yanglingquan for 20 minutes (sparse and dense wave, 0.3-0.6 mA, once daily for 5 times) after modeling, and acupuncture prevention group was acupunctured by the same method before modeling. 2 The expression of 5-HT1F and iNOS mRNA was measured by RT-PCR method. Results: Ten rats of normal control group, 9 of other groups were involved in the result analysis, and 3 were lost. 1 Compared with the normal control group, iNOS mRNA expression in the brain of model control group was significantly raised (P < 0.01), but 5-HT1F mRNA expression was significantly reduced (P < 0.01). 2 Compared with the model control group, the iNOS mRNA expression of the acupuncture prevention and treatment group was, remarkably decreased (P < 0.01), but 5-HT1F mRNA expression was markedly increased (P < 0.01). Conclusion: Acupuncture may prevent and cure migraine by controlling and regulating the expression of 5-HT1F and iNOS mRNA.