Article

Genetic Enhancement of Tomato Crop for Abiotic Stress Tolerance

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  • ICAR - IIHR
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Abstract

India being the second largest producer of tomato will still fall short of the country's requirement. The main concern is the decreasing productivity due to negative effects of environmental stresses. Production of tomato is subjected to many abiotic stresses, mainly heat and drought. In order to sustain tomato production with present day challenges, we need to have a thorough knowledge of the plant's reaction toward the stress and develop sufficient genetically enhanced varieties or hybrids which are tolerant and capable of mitigating the stress. Here we have made an attempt to address the challenge thrown to the breeders by the changing climatic scenario.

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... Tomato is economically one of the most important vegetable crops (Venema et al., 2005) and is widely consumed worldwide (Sadashiva et al., 2013). In fact, as far as commerce is concerned, it ranks second after potato (Jaiswal et al., 2015), occupying an area of 5.0 × 10 6 hectares (ha) with an average production of 37 tons per ha worldwide (FAO, 2014). ...
... Tomato is sensitive to chilling like other plants that originating from subtropical regions (Zhang et al., 2004), and this limits its productivity and geographical distribution (Allen and Ort, 2001;Cao et al., 2015). The crop has an optimal mean daily temperature range between 20 and 25°C, while temperatures under 12°C reduce or inhibit growth (Cao et al., 2015;Sadashiva et al., 2013;Veal et al., 2007). In Southern Europe, seasonal crops such as tomato are usually transplanted to extend the period of cultivation; however, early transplant establishment constitutes a critical stage, exposing plants to the risk of naturally occurring chilling events (Javanmardi et al., 2013). ...
... Cellular membranes are the primary targets under low temperature stress (Gupta and Kaur, 2005;Sadashiva et al., 2013), triggering a cascade of events that induce gene expression modification resulting in physiological and morphological adaptation. Moreover, cold stress causes the production of reactive oxygen species (ROS) (Mittler, 2002) that can cause oxidative damage to DNA, proteins and lipids (Apel and Hirt 2004); on the other hand, ROS increase can modify multiple signaling pathways including early chilling stress response. ...
Article
Six processing tomato seedlings, representative of cultivars widely cultivated over the last 80 years in Southern Europe, were compared to assess the physiological responses to chilling. Low temperature stress was applied for 24 h (1 °C, day and night). PEARSON, the oldest cultivar, reported the highest values of chlorophyll content both using DUALEX (ChlDX = 23.11) and SPAD (ChlSPAD = 35.27) and nitrogen balance index (NBIDX = 29.62) measured with DUALEX, before chilling stress. The cultivar E6203 was the least sensitive to chilling with the highest value of maximal photosystem II (PSII) efficiency (Fv/Fm2 = 0.64) at recovery and visual regrowth score (VS3 = 4.0) at regrowth period. As regards chilling tolerance in terms of maximal PSII efficiency, few differences were observed among the cultivars, apart from C33, that was the most sensitive. On the other hand, a better regrowth was recorded in the modern ones. Strong correlations were found between the different parameters investigated both before (SPAD and DUALEX) and after the chilling stress (maximal PSII efficiency, SPAD and electrolyte leakage). SPAD values at regrowth were shown to be a good indicator of tomato chilling status at regrowth period. Analysis of genetic similarity based on microsatellite markers clearly discriminated modern and old varieties according to the year of release. This information could be useful in breeding programs for new cultivars suitable for early transplant, when chilling injury can happen.
... chilense and L. esculentum var. cerasiforme are drought-tolerant species (Sadashiva et al., 2013). Researches are in progress to clarify molecular pathways on drought response of plants (Sadashiva et al., 2013), and miRNAs can be alternatives to identify drought metabolism, as they play crucial role on abiotic stress response regulating the stress-related mRNAs (Kumar, 2014). ...
... cerasiforme are drought-tolerant species (Sadashiva et al., 2013). Researches are in progress to clarify molecular pathways on drought response of plants (Sadashiva et al., 2013), and miRNAs can be alternatives to identify drought metabolism, as they play crucial role on abiotic stress response regulating the stress-related mRNAs (Kumar, 2014). Determination and functional characterization of stress-related miRNAs and target identification are important in breeding programmes and can contribute to developing new strategies for improving stress tolerance (Barrera-Figueroa et al., 2013). ...
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Drought stress has adverse impacts on plant production and productivity. MicroRNAs (miRNAs) are one class of noncoding RNAs regulating gene expression post-transcriptionally. In this study, we employed small RNA and degradome sequencing to systematically investigate the tissue-specific miRNAs responsible to drought stress, which are understudied in tomato. For this purpose, root and upground tissues of two different drought-responsive tomato genotypes (Lycopersicon esculentum as sensitive and L. esculentum var. cerasiforme as tolerant) were subjected to stress with 5% polyethylene glycol for 7 days. A total of 699 conserved miRNAs belonging to 578 families were determined and 688 miRNAs were significantly differentially expressed between different treatments, tissues and genotypes. Using degradome sequencing, 44 target genes were identified associated with 36 miRNA families. Drought-related miRNAs and their targets were enriched functionally by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses. Totally, 53 miRNAs targeted 23 key drought stress- and tissue development-related genes, including DRP (dehydration-responsive protein), GTs (glycosyltransferases), ERF (ethylene responsive factor), PSII (photosystem II) protein, HD-ZIP (homeodomain-leucine zipper), MYB and NAC-domain transcription factors. miR160, miR165, miR166, miR171, miR398, miR408, miR827, miR9472, miR9476 and miR9552 were the key miRNAs functioning in regulation of these genes and involving in tomato response to drought stress. Additionally, plant hormone signal transduction pathway genes were differentially regulated by miR169, miR172, miR393, miR5641, miR5658 and miR7997 in both tissues of both sensitive and tolerant genotypes. These results provide new insight into the regulatory role of miRNAs in drought response with plant hormone signal transduction and drought-tolerant tomato breeding.
... Currently, tomato (Solanum lycopersicum L.) is considered among the most valuable and economically important horticultural crops (Fondio et al. 2013;Sadashiva et al. 2013), with an annual production of about 180 million tons in 2019 (FAOSTAT 2020). Its production shows an increasing trend with an overall global fruit yield of 182.3 million tons and 1,293,761 tons/year in Morocco in 2019 (FAOSTAT 2019). ...
Article
The present work aimed to investigate the effect of potentially beneficial soil microorganisms in enhancing the tolerance of tomato plants against Verticillium wilt. The autochthonous mycorrhizal fungi "Rhizolive consortium" and plant growth-promoting rhizobacteria (PGPR) boost the growth and development of plants by providing well-adopted strategies and mechanisms to ensure good-quality production and protection to resist different pathogens including Verticillium dahliae. The application of these bio-agents alone and/or in combination with the pathogen was studied to evaluate their impact on tomato crops. In this study, eight treatments were applied: (i) Control, (ii) Rhizolive consortium (M), (iii) ER10 strain (B), (iv) combination of M and B (MB), (v) V. dahliae (V), (vi) Rhizolive consortium + V. dahliae (MV), (vii) ER10 strain + V. dahliae (BV), and (viii) Rhizolive consortium + ER10 strain + V. dahliae (MBV). Co-inoculation of Rhizolive consortium and ER10 strain significantly improved mycorrhizal frequency and intensity, growth and mineral nutrition of tomato plants. Furthermore, stomatal conductance and chlorophyll fluorescence were improved compared to the control. Moreover, the combination of these biostimulants reduced the disease severity and incidence by 26 and 28%, respectively, and the leaf damage index by 69% compared to plants inoculated with V. dahliae. In addition, the Rhizolive consortium alone or combined with ER10 strain resulted in improved antioxidant activities and stress markers. The synergistic interaction between Rhizolive consortium and ER10 strain promoted tomato yield and fruit quality compared to the control. The results highlight the importance of considering these beneficial soil microorganisms to promote plant resistance to Verticillium wilt disease.
... In tomato, various sources which are resistance to drought are identified in wild taxa like LAO429 (S. cheesmaniae Ecuador), LA1334 (S. lycopersicum var. cerasiforme Peru), RF4A (S. pennellii IIHR India), etc. which can be used in the breeding programs to develop drought resistant varieties of tomato [86]. Tests for drought stress tolerance shows that under the drought stress conditions S. pennellii has good ability to increase the water use efficiency when compared to cultivated S. lycopersicum. ...
Article
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Future climate change scenarios have become a major threat and limitation for global food production. The rise in greenhouse gases and temperature throughout the globe has caused perturbance in the natural seasonal cycles. This causes a threat to nutritional and calorific food security for the ever-increasing population in the South Asian Countries. Reduction in the amounts of rainfall in the tropics and subtropics has increased the occurrence of drought leading to more frequent water stress affecting the production of crops, including vegetables, which are predominantly grown in the tropical and sub-tropical regions. India is the second-largest producer of vegetables in the world and heavy consumer of vegetables. The mini-review focused on drought stress effects on the vegetable production and photosynthesis, transpiration, water uptake and other metabolic and developmental processes. Grafting, breeding, cultural and biotechnological strategies are used to combat drought stress and will be used in the future to ease the harmful effects of drought stress.
... Tomato (Solanum lycopersicum L.) is economically one of the most important horticultural crops and it is widely consumed worldwide (Sadashiva et al., 2013;Venema et al., 2005), being second only to potato in world commerce (Jaiswal et al., 2015). The organic cropping system (OCS) met significant interest in many areas of the world (De Ponti et al., 2012) due to its ability to increase agricultural sustainability and biodiversity (Mehdizadeh et al., 2013). ...
... Tomato (Solanum lycopersicum L.) is economically one of the most important horticultural crops and it is widely consumed worldwide (Sadashiva et al., 2013;Venema et al., 2005), being second only to potato in world commerce (Jaiswal et al., 2015). The organic cropping system (OCS) met significant interest in many areas of the world (De Ponti et al., 2012) due to its ability to increase agricultural sustainability and biodiversity (Mehdizadeh et al., 2013). ...
... Tomato (Solanum lycopersicum L.) is one of the most important horticultural crops, within which it ranks second after potato in the world commerce (Sadashiva et al., 2013;Ronga et al., 2017). Cultivated on 4.8 × 10 6 hectares (ha) and with an average yield of 37 tons ha −1 (FAO, 2016), tomato is widely consumed also for its content in lycopene and other valuable anti-oxidant compounds (Raiola et al., 2014). ...
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Blossom-end rot (BER) is a physiological disorder causing severe losses in tomato crops. Despite its economic importance and the large collection of studies concerning its onset, BER occurrence is still poorly understood, making its prediction and prevention very difficult. Currently, two theories are accredited to explain the BER onset: the first one identifies a reduced root uptake and an aberrant regulation of cellular partitioning of calcium as the major physiopathy agent, while the second one hypothesizes a primary role to abiotic stresses, as they induce reactive oxygen species (ROS) production in the plant, leading to membranes disintegration and loss of cell turgor. To date, there are no unequivocal proofs that allow us to definitively go beyond one of the two hypotheses. Rather, a multitude of genetic, physiological and environmental factors form a complex network of interactions and synergies contributing to BER occurrence. This is why the "multi-disciplinary approach" is maybe the most appropriate one to understand this physiopathy and to develop new and effective BER-contrasting tools with genetic and agronomic methods. This review adopts this kind of approach to investigate the causes of BER and to describe the practices preventing its occurrence, possibly providing the most complete compendium about this disorder to date.
... Each variety preserved by one or more farmers can be deemed to be a subpopulation with high levels of genetic differentiation [21]. This is why it is important to characterize the different genepools of the Latin American tomato by focusing on the fruit [22], tolerance to abiotic [23,24] and biotic stress [25,26], phenotypic and genetic diversity [27,28], performance stability or genotype-environmental interaction [5,6], and even aspects relating to consumer preference [29] in order to describe the phenotypic and genetic diversity of the tomato. In terms of the genepools found in El Salvador, studies on phenotypic and genetic diversity are difficult to find or do not exist. ...
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The agromorphological traits and phenotypic variation of mineral content in the fruit were evaluated in eleven tomato accessions from nine communities in El Salvador. The tomato collection was cultivated in a greenhouse with a randomized complete block design with three replications. Plant phenological and fruit traits, as well as the mineral content, were evaluated using atomic-absorption and ultraviolet-visible spectroscopy. In the analysis of variance, significant differences (p < 0.01) among the accessions were determined for agromorphological traits and all mineral elements except Cu. Plant height at 30, 60 and 90 days after transplant, days to flowering and maturating of the fruits, and the number and weight of fruits per plant were useful variables for describing the phenotypic divergences among the tomato accessions. In terms of mineral content, the differences among the accessions were based on Mg, P, S, Fe, Zn and Mn. The weights of the fruits per cluster and per plant and fruit weight presented negative correlations with Ca, Mg, Fe and P (r = -0.67 to -0.71, p < 0.05) and a positive correlation with Na (0.63).
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Chapter
Hybrids With Other Solanum Species In contrast to the normal meiosis of hybrids within Lycopersicon, meiosis in hybrids involving the more distantly related Solanum species is partially disrupted. Observations in this area are based primarily on F1 L. esculentum x S. lycopersicoides hybrids, of which the first were synthesized by Rick (1951). Detailed studies were conducted on comparative chromosome morphology and associations in the 2x and 4x intergeneric hybrids (Menzel 1962, 1964, Menzel and Price 1966). Chromosome behavior during early prophase of the 2x hybrid is relatively normal: chromosomes are completely synapsed and form normal synaptonemal complexes at pachytene. However, occasional inversion or deficiency configurations are observed, and the total pachytene complement length of S. lycopersicoides is nearly 1.5 times that of the cultivated tomato. Chromosomes 4, 9, and 10 of S. lycopersicoides were found to be longer than the corresponding chromosomes of L. esculentum, and the resultant bivalents showed unequal pairs. During meiosis, 2x hybrids undergo reduced chiasma formation and produce about four univalents/cell at metaphase I. In 4x allotetraploids, pairing occurs preferentially among homologous chromosomes, resulting in mostly bivalents and a few multivalents. The 4x hybrids also exhibit greater pollen fertility than diploids, and produce a few viable seeds. In allotriploid (sesquidiploid) hybrids, consisting of two genomes of L. esculentum and one of S. lycopersicoides, preferential pairing of the L. esculentum homologues produces 12 bivalents, with the S. lycopersicoides chromosomes forming 12 univalents (Rick et al. 1986). In addition, the condensation of S. lycopersicoides chromosomes during early diakinesis of the sesquidiploids is significantly delayed with respect to their L. esculentum counterparts. These observations of incomplete chromosome pairing and lack of synchronization during meiosis indicate the chromosomes of L. esculentum and S. lycopersicoides are homeologous.
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Fireball, Hot Set and Porter were compared at 35 degrees C. day and 25 degrees C. night temperatures and at 22 degrees C. day and 18 degrees C. night temperatures. In the high-temperature conditions, Porter gave the highest yield of fruit. At the lower, more normal temperature for tomato growing, Fireball had the highest fruit yield and Porter the lowest. (Abstract retrieved from CAB Abstracts by CABI’s permission)
Article
To assess whether cycles in the weekly pattern of tomato yields were due to the pattern of fruit load on plants, truss-removal and truss-pruning treatments were applied to individual rows within glasshouse compartments. When the pattern of fruit load was stabilized by pruning all trusses to five fruits, fruit size increased although the pattern of yield was similar to that from control rows. Furthermore, imbalances in fruit load caused by truss removal did not cause cyclical fruit production. The effect of temperature on the pattern of yield was investigated by raising air temperature within compartments by about 4.5 K for one week on two occasions. High yields were initially recorded following the start of the high temperature pulse but low yields were subsequently recorded. Overall, there was no significant effect of the treatment on cumulative yields over the course of the experiment. The results show that changes in air temperature are important in determining the pattern of tomato yields. Fruit temperatures were recorded with thermal-imaging equipment and thermistor sensors inserted into fruits. Fruit temperatures in excess of 35°C were recorded, although fruit temperatures were only slightly above air temperatures when averaged over longer periods. Fruits at the south end of the rows were on average 1.9 K warmer than the air compared with 0.9 K warmer in the middle of the rows. For accurate predictions of the pattern of yield, fruit temperatures should be considered.
Article
Crop-scale and controlled environment experiments were carried out to explore the effects of short periods or "pulses" of high temperature on fruit quality defects, uneven ripening and softness for two standard round UK tomato cultivars Solairo and Espero. Elevated temperatures were achieved by manipulating glasshouse heat and vent set points. Heat pulses were applied over 3 or 7 d to explore the impacts of duration, in 1999, and magnitude for a range of mean temperatures 20.4 (control), 22.2, 24.2 and 25.9°C over 3 d in 2000. Fruit defects and yields were significantly increased in the week immediately following the end of a heat-pulse treatment. This demonstrated that i) the development of uneven ripening and softness was confined to fruits between mature green and colour stage 4/5 and that ii) the potential commercial impact of these defects was compounded by the higher yields. Pulse durations of 7 d compared with 3 d exacerbated the incidence of uneven ripening and increased yield but had little additional effect on fruit softening. Strong positive linear relationships were found for the dependence between the key fruit defects and pulse magnitude in the range 20.4-25.9°C. The incidence of uneven ripening increased at a rate of 2.7 units of score and fruit firmness decreased by 0.07 N mm-1 per °C rise in mean pulse temperature. Fruit detached at mature green and placed in controlled environment conditions at constant light and humidity with air temperatures of 20.2, 22.9 and 26.8°C exhibited similar incidences of defect compared with attached fruits sampled from the crop-scale experiments. Future studies could utilise the detached fruit model system to elucidate the mechanisms involved in high temperature induced softness and uneven ripening. To provide an estimate of commercial damage, relationships between percentage Class I uneven ripening fruits and pulse temperature and magnitude were formulated. A heat-pulse lasting 3 d and with a mean temperature of 23.0°C was sufficient to cause a 10% loss of Class I fruit. This temperature regime was lower than previously considered harmful by growers. Implications for predicting the likely impact of high temperature events are discussed.
Article
November-sown tomato crops in NFT were grown at 11–16°C night air temperatures to investigate the possibility of using lower temperatures in order to save fuel. Fruiting was delayed at the lower air temperatures but the final yield and total crop values were increased, provided the lower temperature was restricted either to the period up to or following the onset of fruit picking. The former was preferable because more fuel was saved. The time intervals between the flowering of successive inflorescences and the time between flowering and fruit ripening within an inflorescence depended on air temperature, both processes having a temperature coefficient (Q10) of 1.7. The effect of low air temperature regimes on these two components of crop production is therefore predictable. Root temperatures were increased by up to 12°C above the ambient of ≃ 15°C, either from flowering to picking or from picking onwards in various combinations with the air temperatures. Increasing root temperature up to picking resulted in small reductions in yield and quality of early fruit. During the fruiting phase, however, root heating increased final yield by about 10% over 20 weeks of picking. The economic data suggest that lower night air temperatures than those currently used and higher root temperatures, related to growth phase, would increase the profitability of the tomato crop.
Article
The response of glasshouse grown tomatoes, cv. Counter, to day/night temperature regimes was examined in two consecutive years. In both years three day/night temperature regimes, with the same average 24-hour temperature, were applied in duplicate, i.e. high/low, equal, and low/high. Differences in temperature were maintained from three days after planting (4 December 1984 and 3 February 1986) until 13 May 1985 and 1 May 1986, respectively. Plant development (increase in number of trusses) was not affected.by the temperature regime. Growth in length of the stem was strongly reduced by a lower day temperature. In the first experiment the crop at the low day temperature treatment was damaged by leaf scorch, most likely caused by low transpiration. Consequently, early yield was lower for this treatment. In the second experiment no leaf scorch occurred and no significant differences in early yield were found. Final yield and average fruit weight, until 1 July for both experiments, were higher at the higher night temperature. Shelf life of the fruits and internal quality was not influenced by the temperature regime. Thus, the length of a tomato plant can be manipulated by the difference between day and night temperature, while development and early yield depend greatly on the average 24-hour temperature. Final yield can be higher at higher night temperature and the same average temperature because the crop is more robust. Temperature control based on average 24-hour temperat-ure can be used to minimize energy. consumption and, together with other growth factors, to optimize financial yield.
Article
Volatile components of field-and glass greenhouse-grown tomatoes (Lycopersicon esculentum MILL., variety, V. R. Moscow) of different maturities were studied by gas-liquid and thin-layer chromatography. The following components were separated and identified: isobutyl alcohol, isopentyl alcohol, hexyl alcohol, 2-methyl-3-hexanol, isovaleraldehyde, caproaldehyde, benzaldehyde, furfural, isopentyl acetate, isopentyl butyrate, isopentyl isovalerate, butyl hexanoate, hexyl hexanoate, methyl salicylate and α-pinene. Chromatograms were consistent for both field-and greenhouse-grown tomatoes at all stages of maturity. Except for isovaleraldehyde and hexyl alcohol, the biosynthesis of volatile components increased along with the growth of fruit. Isovaleraldehyde and hexyl alcohol, presumed to give the "green leafy" aroma of tomatoes, were found to be in their highest concentrations at the breaker and the large-green stages, respectively.
Article
In a study carried out at Viterbo, 9 drip irrigation treatments and 3 fertilization treatments were compared in a split-plot experiment. Water deficits were imposed by reducing irrigation volumes to 50% or 75% of crop évapotranspiration in 2 growth periods: before or after fruit set. Irrigation deficit in the 1st growth period reduced the number of flowers leading to a decrease in the number of fruits and in the marketable yield. Water deficits improved the quality of fruits increasing soluble solids and acidity. Reducing irrigation by 25% before fruit set and by as much as 50% in the fruit development and ripening stages resulted in no significant decrease of soluble solid yield. Fertilization affected mainly plant vegetative growth, increasing LAI and biomass.
Article
An analysis of major US crops shows that there is a large genetic potential for yield that is unrealized because of the need for better adaptation of the plants to the environments in which they are grown. Evidence from native populations suggests that high productivity can occur in these environments. Genotypic selection for adaptation to such environments has already played an important role in agriculture, but the fundamental mechanisms are poorly understood. Recent scientific advances make exploration of these mechanisms more feasible. -from Author
Chapter
This chapter evaluates traits for improving crop yield in water-limited environments. The chapter describes the components of yield and the determinants of survival against which the proposed and demonstrated contributions by traits are critically assessed. Both modern and subsistence agriculture are differentiated mainly by the degree of risk that can be tolerated. Many traits have been proposed for improving the performance of drought-affected crops. Putative traits are more effective in enhancing drought resistance and contributing to grain yield in water-limited environments. The potential value of a trait depends upon the crop and the moisture environment in which it is grown. The chapter presents simulation models, which are very powerful tools for critically assessing the value of putative traits. However, more work is needed in the development and testing of suitable models, and in their application for this purpose. Use of near-isogenic populations as opposed to isogenic lines also appears to hold great promise.
Chapter
Tomatoes are grown in the field wherever climatic conditions will permit economic yields to be attained. Field-produced fruit is used for consumption fresh and for processing. In recent years there has been a considerable increase in land area used for tomato production (Table 13.1), ranging from about 15% in China. Greece. India and North Africa up to 40% in Cuba, Indonesia and West Africa. The extra fruit is mainly intended for export to Western Europe, USA and Canada. In many countries there has also been a marked improvement in average yields and quality which are directly attributable to improved understanding and utilization of modern technology.
Article
Desiccation is the extreme form of dehydration. Tolerance of desiccation is acquired by seeds and in resurrection plants, a small group of angiosperms. Desiccation tolerance is the result of a complex cascade of molecular events, which can be divided into signal perception, signal trans-duction, gene activation and biochemical alterations leading to acquisition of tolerance. Many of these molecular processes are also observed during the dehydration of non-tolerant plants. Here we try to give an overview of the gene expression programmes that are triggered by dehydration, with particular reference to protective molecules and the regulation of their expression. Potential transgenic approaches to manipulating stress tolerance are discussed.