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Preliminary study of wing morphometry in relation to tsetse population genetics

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COMPARATIVE MORPHOMETRIC ANALYSIS of shape variation in the wings of different tsetse species reveals close accordance with the phylogenetics of these species indicated by DNA sequence analysis. In practice, the morphometric analysis is economical and simple to carry out, suggesting that this could become a useful surrogate or complementary tool for large-scale studies of tsetse population genetics, designed to identify discrete population targets amenable to local elimination.
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132 South African Journal of Science 101, March/April 2005 Research in Action
Preliminary study of wing
morphometry in relation to
tsetse population genetics
J.S. Patterson*and C.J. Schofield*
COMPARATIVE MORPHOMETRIC ANALYSIS
of shape variation in the wings of different
tsetse species reveals close accordance
with the phylogenetics of these species indi-
cated by DNA sequence analysis. In practice,
the morphometric analysis is economical and
simple to carry out, suggesting that this could
become a useful surrogate or complementary
tool for large-scale studies of tsetse population
genetics, designed to identify discrete popu-
lation targets amenable to local elimination.
Introduction
Control of tsetse (Diptera, Glossinidae:
vectors of African trypanosomiasis) can
be achieved through a variety of tech-
niques, including traps, insecticide-
impregnated targets, live-baits, sequen-
tial aerial spraying (SAT), and sterile male
release (SIT) (see Hargrove1for review). In
most cases, however, the tsetse popula-
tions then tend to recover – either due to
flies surviving the initial interventions,
or immigration of flies from untreated
regions, or both. To achieve and sustain
local elimination of a target fly population,
it is therefore preferable to define the area
of intervention to include an entire
panmictic fly population, such that natural
immigration from neighbouring localities
is of low likelihood. This is most readily
achieved for isolated island populations,
as shown by the elimination of Glossina
pallidipes from the Island of Principe in
1914,2the eradication of G. pallidipes and
G. m. morsitans from Antelope Island,
LakeKariba,Zimbabwe, in 1984,1,3 and the
elimination of G. austeni from Unguja
Island of Zanzibar in 1997.4But for most
mainland populations of tsetse, the geo-
graphical limits of target tsetse popula-
tions are less easily definable.
Application of population genetics
techniques can reveal the existing level of
population differentiation in tsetse,
providing guidance on the distribution of
genetically defined sub-populations. In
essence, the population genetics models
are used to estimate rates of gene flow
between populations, which are taken as
a surrogate for the rate of migration of
individuals. Allozyme studies, for example,
have revealed high levels of genetic
differentiation within populations of
G. pallidipes and other species of the
morsitans group in East Africa,5suggest-
ing that these species exist as a series of
relatively isolated populations, each of
which might be targeted separately for
control interventions. Similarly, mito-
chondrial and microsatellite DNA analy-
ses also reveal a high level of population
structuring within species of the morsitans
group in southern and eastern Africa,6,7
and within some of the G. palpalis gam-
biense populations in West Africa.8,9
Extensive further studies of population
structuring in tsetse seem appropriateas a
guide to planning progressive control
interventions, as envisaged by the
AU-PATTEC initiative.10 In addition, such
studies could help in post-control moni-
toring for analysing the likely source of
survivors or immigrants into treatedareas
– as shown for Triatominae, vectors of
American trypanosomiasis.11 To minimize
the use of expensive techniques of DNA-
sequence analysis for such studies, we
present here a preliminary comparison
of geometric wing morphometry as an
inexpensive surrogate for genetic analy-
sis. This work was carried out at the level
of tsetse species and species-groups, as a
prelude to further studies of within-
species differentiation.
Materials and methods
The insects. Samples were received as
individuals or groups of flies in 70%
ethanol, from colonies maintained at the
FAO/IAEA laboratories in Seibersdorf,
Austria, and from the CIRDES laborato-
ries at Bobo Dioulasso, Burkina Faso.
Additional samples of G. p. gambiense
were collected by trapping along the Kou
valley, Burkina Faso (Table 1).
Wing morphometry. Wings were removed
and dry-mounted between two micro-
scope slides. The right wing of each speci-
men was photographed using a digital
camera. Images of each wing were subse-
quently digitized and 7 cartesian coordi-
nates (homologous landmarks defined by
vein intersections; Fig. 1) were recorded
automatically using TPSdig software
(version 1.39).12 The x, y coordinates were
subjected to generalized procrustes anal-
ysis (GPA)13 and subsequently to a
thin-plate spline analysis14 using TPSrelw
software (version 1.35)15 and TPS regr
(version 1.26),16 allowing visualization of
shape differences as deformation grids.
The analysis produces variables subdi-
vided into uniform and non-uniform
components of shape changes. To offset
the problem of small sample sizes, a prin-
cipal component analysis of the shape
variables delivers fewer shape compo-
nents (‘relative warps’), explaining most
of the shape variance within the data set.
The relative warps were subsequently
analysed by discriminant analysis. Size
differences were assessed using centroid
size (CS), an isometric estimator of size
derived from the GPA superimposition
procedure. Finally, mean Mahalanobis
distances were used in a cluster analysis to
construct a UPGMA dendrogram (Un-
weighted Pair Group Method with Arith-
metic Mean). Multivariate analyses and
graphs were completed using JMP®ver-
sion 4.0.5 (SAS Institute Inc. 2001) and
Intercooled STATA 8.2 for Windows (Stata
Corporation 2003)
DNA sequence comparison: For comparison
with the wing morphometry, we used
available partial sequences of the ribo-
somal DNA internal transcribed spacer-2
(ITS2) downloaded from GenBank
(http://www.ncbi.nlm.nih.gov/) (Table 1).
These sequences were aligned using
Clustal-X and analysed by Neighbor-
*Department of Infectious and Tropical Disease, London
School of Hygiene and Tropical Medicine, London WC1
E7HT, U.K.
Author for correspondence.
E-mail: cj.schofield@lshtm.ac.uk Fig. 1. Slide-mounted tsetse wing showing landmarks used for morphometric analysis.
Research in Action South African Journal of Science 101, March/April 2005 133
Joining using the Kimura-2-parameter
model of base substitution to construct
phylogenetic trees with 1000 bootstrap
replicates.
Results
The first five relative warps (shape
components) accounted for 90.6% of the
variance in the total data set, and were
used as input for the discriminant analysis.
Regressing centroid size against the first
relative warp gave no significant correla-
tion (r= 0.002), suggesting that size is not
the primary factor influencing the major
shape differences. Figure 2 shows the
discrimination of the three main species
groups by wing morphometry. The
discriminant model gave correct reclassi-
fication scores of 100% for pooled mem-
bers of the fusca and morsitans groups
and 95.2% for palpalis (4.2% assigned to
morsitans group). These reclassification
scores were ‘almost perfect’ (kappa =
0.96).17 The first two canonical vectors
(CV) together accounted for 84% of the
total heterogeneity (CV1–56% and
CV2–28%). The thin-plate spline repre-
sentations (Fig. 2a,b) show that most of
the shape change is associated with a
relative elongation of the wing, and this
separates fusca from the morsitans and
palpalis species groups. Figure 2c,d show
that the secondary factor of shape change
is related to the relative arrangement of
vein junctions, and clearly discriminates
between the morsitans and palpalis
groups.
Analysis of the ITS2 sequences revealed
three major clades, with good bootstrap
support. These correspond to the three
species groups, and show clear congruence
with a cluster analysis of the morpho-
metric data (Fig. 3).
Discussion
The 31 currently recognized species and
subspecies of Glossina are customarily
placed into three species groups which
are sometimes given subgeneric status18
the fusca group (subgenus Austenina),
palpalisgroup (subgenus Nemorhina), and
morsitans group (subgenus Glossina).
These groupings are based primarily on
morphological features of the adult
genitalia,19 although they also reflect
differences in distribution, habitat and
behaviour.20 Species of the fusca group
typically occur in lowland rain forests of
Westand Central Africa (exceptions being
G. longipennis and G. brevipalpis in drier
regions of eastern Africa); species of the
palpalis group are more usually associ-
ated with riverine vegetation, but also
extend into savanna regions between
river systems; while species of the morsi-
tans group are primarily associated with
drier savannas. In this study, the geomet-
ric analysis of wing morphometry suc-
cessfully recovered not only the species,
but also the three species-groups.
As initially shown by Solano et al.8for
G. p. gambiense, a degree of correlation can
Table 1.
Glossina
specimens used in the study.
Species group Species Source of material for morphometry (n) ITS2 GenBank accession nos
morsitans G. morsitans s.l. FAO/IAEA, CIRDES (21) AF021360; AF021359; F021358
G. pallidipes FAO/IAEA (5) AF021357(1); AF021356(2)
G. swynnertoni FAO/IAEA (4) AF021355
palpalis G. palpalis gambiensis FAO/IAEA, CIRDES, and Kou valley (16) AF024505
G. fuscipes FAO/IAEA (4) AF021352
G. tachinoides CIRDES (4) AF021353
fusca G. brevipalpis FAO/IAEA (3) AF022361(1); AF022360(2)
Fig. 2. Discriminant analysis of the morphometric data, showing the distribution of specimens in the space defined by the first two canonical variates (CV1 and CV2).
a–d are thin-plate splines showing, by deformations from the mean, shape differences of the wings that correspond to the indicated species/species groups on both axes
(landmarks on the deformation grids are numbered as in Fig. 1).
134 South African Journal of Science 101, March/April 2005 Research in Action
be found between estimates of popula-
tion structuring based on analysis of
microsatellite DNA, and comparative
wing morphometrics. Using linear wing
morphometrics, these authors showed
clear separation between G. p. gambiense
populations of Senegal and Burkina Faso,
but not between populations within
Burkina Faso which were revealed by
comparative analysis of microsatellite
DNA sequences. Genetic separation of
the Senegal populations from those of
Maliwas also confirmed by Marquez et al.9
using comparisons of mitochondrial
DNA sequences. In our study, the very
high congruence over seven species and
subspecies between genetic comparisons
based on a ribosomal DNA sequence, and
phenetic comparisons based on geometric
morphometry, suggests that the geometric
analysis is a more sensitive surrogate
for the DNA sequence comparisons. It
appears, moreover, that wing shape may
represent a relatively neutral trait that is
not heavily modulated by ecological
adaptationor environmental constraints.
In practice, data collection for geometric
analysis of wing shape is relatively
simple. The wings can be dry mounted
between microscope slides and then
either scanned (using a computer scan-
ner) or photographed with a digital cam-
era. The resulting image can then be
processed using freely available software
(e.g. http://life.bio.sunysb.edu/morph/),
or sent as an e-mail attachment to a refer-
ence laboratory for further analysis. Such
a procedure is simpler and much less
costly than current techniques for DNA ex-
traction and sequencing, and offers op-
portunities for rapid processing of large
samples of field-collected material cover-
ing the entire distributional range of tar-
get species and subspecies of tsetse. This
would permit detailed analysis of popula-
tion structuring to identify the geograph-
ical limits of discrete or panmictic
populations, which would represent
targets for control interventions that
would be least likely to suffer from
post-control reinvasion. In addition, as
shown for Triatominae,11 such studies
can also be used for post-intervention
monitoring, providing a way to confirm
whether any newly encountered tsetse
are survivors from the initial control
interventions (indicating a local control
failure) or are immigrants from a neigh-
bouring population of that species (per-
haps indicating a breakdown of control
barriers).
In the context of the African Union
initiative to eliminate the problem of
tsetse and trypanosomiasis (AU-PATTEC),10
we believe that these techniques could
be particularly applicable for defining
geographical areas amenable to large-
scale elimination of the tsetse popula-
tions. There is a wealth of evidence that
tsetse control is feasible, but also that it is
difficult to sustain over the long term.1,21,22
By contrast, local elimination of tsetse is
sustainable, but generally held to be feasi-
ble only for geographically constrained
situations such as islands.1,2,4 The task of
population genetics studies is, in a sense,
to find and define those biogeographical
‘islands’ of tsetse distribution on main-
land Africa, and our study shows that this
may be feasible on a large scale using the
techniques of geometric morphometry,
with confirmation from smaller-scale
studies using the more expensive methods
of DNA sequence comparisons.
A summary of this work was presented as a poster at
the IX European Multicolloquium of Parasitology,
Valencia, Spain (18–23 July 2004). We thank Alan
Robinson (FAO/IAEA Laboratories), Abdoulaye
Gouro and Idrissa Kabore (CIRDES), and Tamboura
Issa (UCLT, Burkina Faso) for supplying the insects
used in this study, and Brian Williams for encourage-
ment and critical reading of the manuscript.
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Fig. 3. Comparison of Neighbor-Joining k2p linearized tree (left) with UPGMA cluster analysis of Mahalanobis
distances from wing morphometrics (right). Numbers indicate per cent bootstrap support from 1000 replicate
analyses.
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The geometric morphometrics of the wings has been an important method for the identification and evaluation of honey bee diversity patterns around the world. Honey bee populations of the Macaronesian archipelagos of Canaries and Madeira have been intensively surveyed for diversity using a variety of genetic markers. In contrast, honey bee populations inhabiting the Azorean archipelago have been largely undersampled. To fill this gap, we sampled 473 colonies from across the Azores and assessed diversity patterns using a geometric morphometrics approach. A total of 5 forewings were collected per colony, mounted in a slide and photographed with a stereomicroscope. Additionally, the forewings representing 711 colonies of A. m. iberiensis, 11 A. m. ligustica, 15 A. m. carnica and 12 A. m. caucasia were used as reference samples. To extract shape information, 19 anatomical landmarks were plotted across the veins’ intersections in the wing structures of all individuals. The analyses of wing shape were performed in MorphoJ using the Procrustes superimposition method. Shape differences were investigated through multivariate statistical analysis and Mahalanobis and Procrustes distances were used to construct a dendrogram of the morphological proximity. Results revealed the power of landmark-based methods to discriminate different honey bee populations from the Azores, and also to distinguish them from the subspecies of the reference collection. The wing geometric morphometrics patterns showed that while, overall, populations from the Azores exhibited a closer relationship with A. m. iberiensis, some populations, especially those from the islands of Graciosa, but also Terceira and Pico tended to cluster closer to A. m. ligustica, A. m. carnica. Several non-mutually exclusive factors can contribute to the observed wing patterns such as the recent human-mediated introductions of subspecies from Eastern Europe, and the founder effect resulting from honey bee introductions in historical times. Moreover, the particular insular environment and the barrier to gene flow due to geographical isolation possibly shaped the diversity patterns currently observed in the Azores.
Thesis
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Triatomine bugs (Hemiptera: Reduviidae: Triatominae) are the vectors of Chagas disease in South and Central America. Chagas disease predominantly affects poor rural communities with simply constructed housing susceptible to infestation by triatomines. Chagas disease is restricted to the Americas largely due to the limited distribution of triatomine bugs. The global diversity of triatomines is -130 species, of which only -10% are known to occur outside the Americas, one species (Triatoma rubrofasciata) is tropicopolitan, and the others are concentrated on the Indian subcontinent (Linshcosteus spp. ) and adjacent south east Asian island groups (Triatoma spp. ). The main objectives of this PhD programme were to: a) assess the facility of morphometric approaches (measurement and robust statistical analysis of morphological variation) in the study of population structure of vector species with proximal domestic and silvatic distributions to detect population structure and give information on the risk of reinvasion, b) study interspecific and higher taxonomic level relationships of New World and Old World triatomine bugs. To these ends geometric morphometric analyses were conducted in concert with molecular genetic analyses of mitochondrial and nuclear DNA sequences. The principal question being: Does the relatively low cost method of morphometrics reveal patterns consistent with population structure, as otherwise determined by more expensive molecular genotyping methods? Or are such patterns disrupted by environmental effects and intraspecific convergent/divergent morphological evolution? Combined morphometrics and molecular genetics were used to study vector populations in three of the countries that continue to be most affected by Chagas disease. In Venezuela and Ecuador Rhodnius species (R. prolixus and R. ecuadoriensis respectively) were studied, in areas where they occur in both domestic and silvatic environments, and in Paraguay T. infestans from a domestic and a putative silvatic focus. Head and wing morphometrics were compared to mitochondrial DNA sequence data to assess the population structure and disparity among domestic and silvatic samples in each case. The results presented suggest that head shape variation is subject to morphological plasticity and/or selective pressure and functional constraint and does not correlate well with the 11 Abstract phylogeny. However, in all examples, wing shape was found to be congruent with the phylogenetic patterns inferred from sequence analysis. Consequently, it is recommended that wing shape and not head shape be used in morphometric assessments of population dynamics. It is also asserted here that if population structure is suggested by morphometrics, it should be followed by robust population genetic analysis. As such, morphometrics could be used as a tool for broad surveillance to identify areas of concern. A further objective was to elucidate the broader phylogeny of Triatominae and their relationships with other reduviid subfamilies. To investigate the debated polyphyletic origin of the Triatominae molecular approaches were used. Combined head and wing morphometric and molecular genetic analyses of New World and Old World Triatominae have revealed patterns of convergent morphological evolution (among New World and Old World Triatoma) and striking examples of strongly divergent morphological evolution (between Old World Triatoma and Linshcosteus). Applying a molecular clock based on the rate of sequence divergence for a fragment of ribosomal DNA (D2-28S), calibrated to the fossil record and vicariant events (the divergence of ancestral lineages due to separation by topographical or ecological barriers) it has been possible to reconstruct a likely evolutionary history for the Triatominae and the Reduviidae as a whole. The weight of evidence presented supports a polyphylectic origin for blood-feeding for the Triatominae. The apparent independent development of blood feeding among the main lineages of the Triatominae represented by the genera Triatoma and Rhodnius highlights a fundamental biological difference among important vector species. This difference is likely to become evident in the eventual post genomic era in studies of vector/parasite interactions and it highlights the importance of sequencing genomes from different vector genera.
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Chapter
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Book
Morphometrics is the statistical study of biological shape and shape change. Its richest data are landmarks, points such as 'the bridge of the nose' that have biological names as well as geometric locations. This book is the first systematic survey of morphometric methods for landmark data. The methods presented here combine conventional multivariate statistical analysis with themes from plane and solid geometry and from biomathematics to support biological insights into the features of many different organs and organisms. This book will be of value to applied statisticians and geometers, as well as to all biological and biomedical researchers who need quantitative analyses of information from biomedical images.
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