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New fossil Bathymodiolus (sensu lato) (Bivalvia: Mytilidae) from Oligocene seep-carbonates in eastern Hokkaido, Japan, with remarks on the evolution of the genus

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A new species of the genus Bathymodiolus (sensu lato) is herein described from the lower Oligocene Nuibetsu Formation in eastern Hokkaido, Japan. This is the oldest species of this genus in Japan and the second oldest world wide. Based on occurrence and distribution of fossil Bathymodiolus (sensu lato), we suggest that the " genus " spread to the whole world by the late Miocene. This dispersal pattern is supported by molecular studies and similar to that of the large vesicomyids.
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New fossil Bathymodiolus (sensu lato) (Bivalvia: Mytilidae) from
Oligocene seep-carbonates in eastern Hokkaido, Japan, with
remarks on the evolution of the genus
Kazutaka Amano
Department of Geoscience
Joetsu University of Education
Joetsu 943-8512, JAPAN
amano@juen.ac.jp
Robert G. Jenkins
JSPS Research Fellow
Faculty of Education and Human Sciences
Yokohama National University
Yokohama 240-8501, JAPAN
ABSTRACT
A new species of the genus Bathymodiolus (sensu lato) is
herein described from the lower Oligocene Nuibetsu Forma-
tion in eastern Hokkaido, Japan. This is the oldest species of
this genus in Japan and the second oldest world wide. Based on
occurrence and distribution of fossil Bathymodiolus (sensu
lato), we suggest that the “genus” spread to the whole world
by the late Miocene. This dispersal pattern is supported by
molecular studies and similar to that of the large vesicomyids.
Additional keywords: Oligocene, fossil, biogeography,
Mytiloidea
INTRODUCTION
Bathymodiolus (sensu lato) is one of the representative
members of chemosynthetic communities frequently
found at hydrothermal vents and cold seeps. Phylogenetic
relationships between Bathymodiolus (sensu lato) and
other modioline mussels are of considerable interest, since
Distel et al. (2000) hypothesized that Bathymodiolus
(sensu lato) in the seep and vent sites originated from
small wood- or bone-associated modiolines. The recent
description of Vulcanidas from a shallow vent site by
Cosel and Marshall (2010) suggests that pathways
of adaptation occurred at least three times in the
bathymodiolines. It is necessary to examine such pathways
of adaptation from the view point of the fossil record.
Six Recent species of this genus are known around
Japan (Sasaki et al., 2005). Morphologically, the genus
can be classified into the four groups Bathymodiolus
thermophilus,B. brevior,B.heckerae, and B. childressi
(see Cosel, 2002). Most molecular studies, however, indi-
cate that the genus is not a monophyletic group but
includes instead several distinct clusters (e.g., Miyazaki
et al., 2004; Jones et al., 2006; Iwasaki et al., 2006;
Samadi et al., 2007; Fujita et al., 2009). Based on these
studies and their morphological data, Cosel and Janssen
(2008) recognized the following three clades, the
B. thermophilus,B. aduloides, and B. childressi clades.
Moreover, the B. childressi clade was subdivided
into six groups, including the genus Gigantidas Cosel
and Marshall, 2003 as one group. Among them, the
B. thermophilus clade includes B. thermophilus,
B. brevior,B.heckerae groups of Cosel (2002). Recently,
Miyazaki et al. (2010) examined COI and ND4 genes
and divided Bathymodiolus into four groups that corre-
spond to three clades of Cosel and Janssen (2008) and
one clade of the genus Tamu Gustafson, Turner, Lutz,
and Vrijenhoek, 1998. Very recently, Lorion et al.
(in press) also suggested that Bathymodiolinae should
be split into the B. thermophilus and B. childressi
groups, based on the studies of COI mtDNA and 28S
rRNA. As a conclusion, the genus Bathymodiolus is not a
monophyletic group, but consists of two or three clades.
Strictly speaking, the genus Bathymodiolus should be
used only for the molecular clade including the type
species, B. thermophilus Kenk and Wilson, 1985. How-
ever, some authors used Bathymodiolus (sensu lato) to
the clades other than B. thermophilus clade (e.g., Cosel
and Janssen, 2008; Kiel et al., 2010). In this paper, we
use Bathymodiolus (sensu lato) for all species hitherto
described as Bathymodiolus.
The fossil record of Bathymodiolus (sensu lato) can be
traced back to B. willapaensis, which dates from the
middle Eocene (Kiel, 2006). In Japan, only three certain
and two doubtful fossil records of Bathymodiolus (sensu
lato) are known from cold-seep sites. One of these
records is from the middle Miocene Akanuda Limestone
of the Bessho Formation in central Nagano Prefecture.
Kuroda (1931) described Tamarindiformis akanudaensis
as a new species from Akanuda, Matsumoto City. Then,
Tanaka (1959) illustrated this species as Volsella.
Recently, Nobuhara et al. (2008) mentioned that the
species possibly belongs to the bathymodiolines, based
on the morphology of its juvenile shell. This species has
been also illustrated from a large seep carbonate of the
uppermost middle Miocene Ogaya Formation in Niigata
Prefecture (Amano et al., 2010). “Bathymodiolus” sp.
has been obtained and illustrated from siltstone of the
THE NAUTILUS 125(1):29–35, 2011 Page 29
Pliocene Tamari Formation in Shizuoka Prefecture by
Nobuhara (2003). In addition to these records, Katto
and Masuda (1978) illustrated one specimen from the
carbonate of the Oligocene(?) Muro Group in Wakayama
Prefecture as Modiolus sp. This species occurred in asso-
ciation with Conchocele cf. nipponica (Yabe and
Nomura, 1925) and Callista cf. hanzawai (Nagao, 1928)
(¼probably not Callista, but a vesicomyid). Moreover,
Amano et al. (2004) found several specimens of
Bathymodiolus? sp. in mudstone of the middle Miocene
Higashibessho Formation in Toyama Prefecture.
Fortunately, we could collect many bathymodioline
specimens of a new species from an Oligocene deposit
in Urahoro-cho, eastern Hokkaido. This is the oldest
record in Japan at the moment. In this paper, we
describe it and discuss its biogeographic significance
and evolutionary trend of Bathymodiolus (sensu lato).
MATERIALS
The new species described herein is from limestones
of the lower Oligocene Nuibetsu Formation which
crops out along the Atsunai River, 1.5 km east of Kami-
Atsunai railway station in Urahoro-cho, eastern Hok-
kaido (Figure 1). The limestone can be subdivided into
three parts from bottom to top; limestone yielding many
fossils and mudstone breccias (10m thick), laminated
limestone without fossils (2 m thick) and limestone
yielding pebbles of slate, plant debris and fossils (4 m
thick). Carbonate minerals of the lower limestone pre-
cipitated in an early diagenetic stage are depleted in
13
C
(d
13
C values as low as –49%vs. PDB; Pee Dee Belem-
nite standard), which indicates methane seep activity
(Peckmann and Thiel, 2004). Although both lower and
upper parts yield chemosynthetic bivalves, and carni-
vore or scavenging gastropods, Bathymodiolus (sensu
lato) was collected only from the parts, in association
with the thyasirid Conchocele bisecta (Conrad, 1849),
the vesicomyid Hubertschenckia ezoensis (Yokoyama,
1890), the solemyids Acharax aff. gigas (Kanno, 1960),
A. sp., the naticid Euspira meisensis (Makiyama, 1926)
and the buccinid Colus cf. fujimotoi Hirayama, 1955.
Terminology of description follows Gustafson et al.
(1998). All specimens are stored at the Joetsu University
of Education (JUE).
SYSTEMATICS
Family Mytilidae
Genus Bathymodiolus Kenk and Wilson, 1985
Type Species: Bathymodiolus thermophilus Kenk and
Wilson, 1985 from hydrothermal vent fields on the
Galapagos Rift.
Bathymodiolus (sensu lato) inouei new species
(Figures 2–6, 9, 11, 12)
Diagnosis: A small-sized Bathymodiolus (sensu lato)
with elongate shell, beak near anterior end, nearly
straight dorsal and ventral margin; blunt ridge running
from umbo to posterior corner.
Description: Shell of small size for genus, up to
45.4 mm long, modioliform, elongate (height/length
ratio ¼0.30–0.59; length/height ratio ¼1.71–3.31),
equivalve and inequilateral, moderately inflated, sculp-
tured by growth lines only. Blunt ridge running from
beak to posteroventral corner. Beak prosogyrate, situated
near anterior end (position of umbo; 2.3–6.9 % of shell
length from anterior end). Anterior margin broadly
Figure 1. Locality map.
Page 30 THE NAUTILUS, Vol. 125, No. 1
Figures 2–6, 9, 11, 12. Bathymodiolus (sensu lato) inouei new species. All specimens from type locality. 2, 3, 5. Holotype, length
28.7 mm, JUE no. 15873. 2. Right valve. 3. Left valve. 5. Dorsal view. 4. Paratype, length 8.7 mm, JUE no. 15874-5, right valve
(juvenile). 6. Paratype, length 28.4 mm, JUE no. 15874-4, left valve; AA, anterior adductor scar; PA, posterior adductor scar; PBR,
posterior byssal retractor scar. 9. Paratype, length 30.5 mm, JUE no. 15874-3, left valve. 11. Paratype, length 30.8 mm, JUE no.
15874-1, right valve. 12. Paratype, length 31.1 mm, JUE no. 15874-2, left valve. Figures 7, 10. Bathymodiolus (sensu lato)
willapaensis (Squires and Goedert). Topotype from Bear River deposit, Washington State, USA, collected by RJ. 7. Length
11.8 mm, JUE no. 15876-1, left valve. 10. Length 13.8 mm, JUE no. 15876-2, right valve. Figures 8, 13–15. Bathymodiolus (sensu
lato) akanudaensis (Kuroda). 8, 14, 15. Topotype specimens. 8. Length 29.6 mm, JUE no. 15882-1, dorsal view; 14. Length
22.4 mm, JUE no. 15882-3, right valve. 15. Length 24.2 mm, JUE no. 15882-2, left valve. 13. Length 15.4 mm, JUE no. 15883, left
valve, loc. Kita-Kuroiwa, Joetsu City.
K. Amano and R. G. Jenkins, 2011 Page 31
arched; ventral margin nearly straight; posterodorsal
margin very broadly arched, continuing into steeply slop-
ing posterior margin. Hinge edentulous. Nymph
extending from beak and occupying 55% of dorsal mar-
gin. Anterior adductor muscle scar distinct, small and
semicircular; posterior adductor scar large and ovate;
posterior byssal retractor scar long, thin, united with
posterior adductor scar.
Holotype: JUE no. 15873.
Paratypes: JUE no. 15874-1 to JUE no. 15874-5; all
from the type locality.
Type Locality: Outcrop along the Atsunai River,
1.5km east of Kami-Atsunai Railway Station in Urahoro-
cho, eastern Hokkaido.
Material Examined: Eighty specimens were exam-
ined. Among these, forty-six are articulated.
Measurements: See Table 1.
Remarks: The new species can be identified as
Bathymodiolus (sensu lato) because of its modioliform
shape and the occurrence from the cold seep site. Owing
to its terminal umbo and its continuous posterior retrac-
tor scar united posterior muscle scar, the new species
may be assigned to the B. childressi clade by Cosel and
Janssen (2008).
Comparison: The Eocene species Bathymodiolus
willapaensis (Squires and Goedert, 1991) (Figures 7, 10)
has very similar outline to juvenile form of the present
species, but has much smaller (27 mm long) and higher
shell than B. (sensu lato) inouei new species (figure 16).
Also, B. akanudaensis (Kuroda, 1931) from the Miocene
Bessho and Ogaya Formations (Figures 13–15) can
be discriminated by having distinctly higher and more
inflated shell than the new species (Figures 16, 17).
Bathymodiolus (sensu lato) inouei resembles Bathym-
odiolus (sensu lato) palmarensis Kiel, Campbell and Gail-
lard, 2010, from the “Oligocene” deposit of Colombia,
in its elongated shell and its beak located near anterior
end, but differs from it by having less distinct ridge and
less expanded posterior part. Volsella yokoyamai Hatai
and Nisiyama, 1952 described from the upper Eocene
Iwaki Formation in Fukushima Prefecture resembles
B. (sensu lato) inouei in having an elongate shell, but
differs by its well inflated shell, more posteriorly located
beak and more distinct ridge. One specimen illustrated by
Table 1. Measurements of Bathymodiolus (sensu lato) inouei new species.
Page 32 THE NAUTILUS, Vol. 125, No. 1
Katto and Masuda (1978) as Modiolus sp. from the Oligo-
cene? Muro Group in Wakayama Prefecture may be
inferred as Bathymodiolus (sensu lato) by the occurrence
from the carbonate in association with chemosynthetic
species. This specimen is similar to the new species in its
shell outline. However, owing to a few data on its speci-
men, it is necessary to collect additional specimens for
comparing with this new species in detail.
Distribution: Known only from type locality. Lower
Oligocene Nuibetsu Formation in Hokkaido.
Etymology: Named after Mr. Kiyokazu Inoue,
Obihiro City, an amateur collector of molluscan fossils,
who found the locality of this new species.
DISCUSSION
Only four Paleogene species of Bathymodiolus (sensu
lato) are presently known. Among them, B. willapaensis
is the oldest species, having been reported from middle
Eocene to late Oligocene seep carbonates in Washington
State, USA (Goedert and Squires, 1990; Squires and
Goedert, 1991; Goedert and Squires, 1993; Goedert and
Campbell 1995; Kiel, 2006). Probably, the next oldest
record is the present new species from the lower Oligo-
cene. Kiel et al. (2010) described B. palmarensis from
the “Oligocene” in Colombia, but its precise age is uncer-
tain. Moreover, one specimen was illustrated as
Modiolus sp. from the Oligocene? Muro Group in Waka-
yama Prefecture, central Honshu by Katto and Masuda
(1978). All Paleogene species are small (less than 50 mm)
and have their beak located near the anterior end which
is one of the diagnostic features of Bathymodiolus
childressi clade.
In contrast, many records of Bathymodiolus (sensu
lato) are known from the Neogene deposits around the
world. Bathymodiolus akanudaensis and B.?sp.occur
in a middle Miocene deposit in central Honshu
(Kuroda, 1931; Tanaka, 1959; Nobuhara et al., 2009;
Amano et al., 2004, 2010). In the Caribbean area, two
bathymodioline species have been described from the
Miocene Freeman’s Bay Limestone of the late middle
Miocene Lengua Formation in Trinidad and from the
lower to middle Miocene Husto Clay Member of the
Pozon Formation in Venezuela (Gill et al., 2005).
Modiolus (Modiolus)exbrochii exbrochii Sacco and an
elongate Bathymodiolus-like fossil were reported from
the upper Miocene “Carcari a Lucina”atMontepetra,
Italy (Moroni, 1965; Taviani, 1994, 2001). Recently,
Saether et al. (2010) described Bathymodiolus (sensu
lato) heretaunga and Gigantidas coseli as new species
from the ?late early to the earliest late Miocene in the
North Island of New Zealand. Of Pliocene age is
Bathymodiolus” sp. reported by Nobuhara (2003) from
siltstone of the Tamari Formation in the forearc basin
of Honshu.
Considering the geographic distribution of these
records, we suggest that the worldwide spread of
Bathymodiolus (sensu lato) might occur by the late Mio-
cene (Figure 18). This trend of geographic spread is the
same to that of the large vesicomyids which is another
characteristic taxa of chemosynthetic fauna (Taviani,
2001; Gill et al., 2005; Lucentte and Taviani, 2005;
Amano and Kiel, 2007; Amano and Kiel, in press; Kiel
and Peckmann, 2007; Campbell et al., 2008; Kiel and
Amano, 2010). Moreover, this pattern is consistent with
the molecular study of Miyazaki et al. (2008), who esti-
mated that the worldwide spread of Bathymodiolus
(sensu lato) took place during the middle Miocene.
Figure 17. Ontogenetic changes in shell length and width of
Bathymodiolus (sensu lato) inouei,B. (sensu lato) willapaensis
and B. (sensu lato) akanudaensis.
Figure 16. Ontogenetic changes in shell length and height of
Bathymodiolus (sensu lato) inouei,B. (sensu lato) willapaensis
and B. (sensu lato) akanudaensis.
K. Amano and R. G. Jenkins, 2011 Page 33
ACKNOWLEDGMENTS
We are grateful to Steffen Kiel (University of Go
¨ttingen)
for his review and useful comments to this paper. We
thank Kiyokazu Inoue (Obihiro City) for his information
on the fossil locality and two anonymous reviewers for
their critical reading of this manuscript and useful
advices. We also thank Tsuzumi Miyaji (University of
Tokyo) for her help on isotope analysis. This study was
partly supported by a Grant-in-aid for Scientific
Research from the Japan Society for Promotion of
Science (C, 20540456, 2008–2010) and the Nippon
Foundation-HADal Environmental Science Education
Program (HADEEP).
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K. Amano and R. G. Jenkins, 2011 Page 35
... Among bivalves, Bathymodiolus and Vesicomyidae are considered to be characteristic of a chemosynthetic community (e.g., Sasaki et al., 2005). The oldest reported Bathymodiolus fossils are from middle Eocene seep rocks (Kiel, 2006;Kiel and Amano, 2013), and the fossil record of this taxon continues to the present (Nobuhara, 2003;Amano et al., 2010;Kiel et al., 2010;Saether et al., 2010;Amano and Jenkins, 2011). ...
... These modern Bathymodiolinae thus rely on these methanotrophic and thioautotrophic bacteria for their nutrients. Fossil Bathymodiolinae associated with Eocene to Pliocene 13 C-depleted authigenic limestones (i.e., seep carbonates) are assumed to have harbored chemosynthetic symbionts (Nobuhara, 2003;Amano et al., 2010Amano et al., , 2013Kiel et al., 2010;Saether et al., 2010;Amano and Jenkins, 2011;Kiel and Taviani, 2017). Modern Bathymodiolinae, however, retain gastrointestinal organs and the ability to digest organic matter obtained by filtration (e.g., Van Dover, 2000;Yamanaka et al., 2015). ...
... Although fossil Bathymodiolinae were not found at high density in the Fukuzaki Limestone, it is plausible that the fossil Bathymodiolinae in limestone relied on chemosynthetic or methanotrophic production. The shell length of Bathymodiolinae did not exceed 50 mm until the early Miocene (Kiel et al., 2010;Saether et al., 2010;Amano and Jenkins, 2011), whereas from the middle Miocene onward shell length rapidly increased (Lorion et al., 2013). In addition, Lorion et al. (2013) mentioned that some bathymodiolins were able to harbor methanotrophic symbionts from the early Miocene onward (after ca. ...
Article
The Fukuzaki Limestone is a small limestone lens embedded in siliciclastic Taishu Group rocks on Tsushima Island in the southwestern Japan Sea. A fossil assemblage in this limestone consisting of the bivalve mollusc Bathymodiolus sp. (Bathymodiolinae) was previously inferred, on the basis of the limestone's isolated lenticular occurrence and the chemosynthetic nature of modern Bathymodiolinae, to rely on chemosynthetic production, but conclusive evidence was not provided. Carbon, nitrogen, oxygen, and sulfur isotope ratios in the limestone and its host rock mudstone were measured to clarify the paleoecology of the fossil assemblage and the formation environment of the limestone. The low δ¹³C (−39.8‰ to −31.7‰) and δ¹⁸O (−13.8‰ to −11.9‰) values of carbonate of the limestone lens strongly suggest that the limestone is composed of authigenic carbonate rock precipitated from bicarbonate derived from anaerobic oxidation of biogenic or thermogenic methane. The fossil assemblage in the limestone lens is consistent with a chemosynthesis-based animal assemblage harboring thioautotrophic (sulfur-oxidizing) symbionts, and the low δ¹³C and δ³⁴S values of total organic carbon and sulfide sulfur, respectively, in the limestone lens and mud layers suggest that they reflect chemosynthetic production using hydrogen sulfide derived from anaerobic methane oxidation by microbes. Furthermore, the stratigraphic position of the lens in the upper part of the Lower Unit of the Taishu Group indicates that it was precipitated at a water depth >800 m (deeper than the lower middle bathyal zone). These findings indicate that a deep-sea basin locally supplied with methane had already formed in the southwestern Japan Sea by rapid subsidence during the opening stage of the Japan Sea (16–17 Ma).
... Those from the Canyon River were blocks found as float on gravel bars along the river, among them several from UWBM loc. B7452 that include specimens of Bathymodiolus inouei Jenkins, 2011b, andLucinoma sp. (Kiel andAmano 2013) in addition to the vesicomyid reported herein; the other was found at about 47.267522° N, 123.526238° ...
... Among other families of chemosymbiotic bivalves, the eastern and western North Pacific regions shared the bathymodiolin mussel Bathymodiolus inouei Amano and Jenkins, 2011, the lucinid Lucinoma acutilineatum (Conrad, 1849), and the thyasirid Conchocele taylori Hickman, 2015, during the late Eocene to Oligocene (Majima et al. 2005;Kiel 2010c;Amano and Jenkins 2011b;Kiel and Amano 2013;Hickman 2015;Hryniewicz et al. 2017). Whether the Neogene Con chocele bisecta (Conrad 1849) indeed occurs on both sides of the North Pacific (Weaver 1942;Majima et al. 2005;Kiel 2010a), or represents an as-yet undifferentiated garbage-bin taxon, remains to be tested. ...
... Those from the Canyon River were blocks found as float on gravel bars along the river, among them several from UWBM loc. B7452 that include specimens of Bathymodiolus inouei Jenkins, 2011b, andLucinoma sp. (Kiel andAmano 2013) in addition to the vesicomyid reported herein; the other was found at about 47.267522° N, 123.526238° ...
... Among other families of chemosymbiotic bivalves, the eastern and western North Pacific regions shared the bathymodiolin mussel Bathymodiolus inouei Amano and Jenkins, 2011, the lucinid Lucinoma acutilineatum (Conrad, 1849), and the thyasirid Conchocele taylori Hickman, 2015, during the late Eocene to Oligocene (Majima et al. 2005;Kiel 2010c;Amano and Jenkins 2011b;Kiel and Amano 2013;Hickman 2015;Hryniewicz et al. 2017). Whether the Neogene Con chocele bisecta (Conrad 1849) indeed occurs on both sides of the North Pacific (Weaver 1942;Majima et al. 2005;Kiel 2010a), or represents an as-yet undifferentiated garbage-bin taxon, remains to be tested. ...
Article
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New discoveries of Cenozoic deep-water hydrocarbon seep deposits and continued collecting at previously documented sites in the North Pacific region have resulted in additional fossils of vesicomyid bivalves and necessitate a systematic review. We report five new vesicomyid species, including four species from western Washington State, USA: Isorropodon humptulipsense sp. nov. from middle to upper Eocene strata of the Humptulips Formation and the “Siltstone of unit B”, the oldest record for Isorropodon, Pleurophopsis thieli sp. nov. from upper Eocene to lowermost Oligocene strata of the Lincoln Creek, Makah, and Pysht formations, and Pliocardia? guthrieorum sp. nov. and Squiresica plana sp. nov. from Oligocene strata of the Lincoln Creek and Pysht formations. The new species Squiresica yooni sp. nov. is from the Middle Miocene Duho Formation in South Korea. We report possibly the as-yet oldest Vesicomya from a lower Oligocene seep deposit in the Lincoln Creek Formation in western Washington. Pliocardia kawadai was previously only known from Lower to Middle Miocene strata in Japan; with our new record from the Lower to Middle Miocene Astoria Formation in western Washington, this species represents the first fossil vesicomyid species with a trans-Pacific distribution. The large and elongated Pleurophopsis chinookensis is restricted to upper Eocene strata; previous Oligocene records are shown to belong to other species.
... However, due to a lack of taxonomically important byssal muscle scars preserved in any of the 'B.' akanudaensis specimens that we examined (cf. Cosel & Janssen, 2008;Saether et al. 2010b;Amano & Jenkins, 2011b;Xu et al. 2019), we are unable to resolve the generic identity of this species. ...
... Likewise, the fossil 'Bathymodiolus' is a member of Eocene and younger fossil seep faunas worldwide (e.g. Saether et al. 2010b;Amano & Jenkins, 2011b;Kiel & Taviani, 2017), and thus its presence in the early Miocene seep fauna from the Taishu Group is also concordant with the stratigraphic range of this genus. Among them, it has been elucidated that 'Bathymodiolus' akanudaensis is an endemic species of the early to middle Miocene Sea of Japan, corresponding to the oldest record of the species. ...
Article
Full-text available
The studied seep carbonates from Tsushima, Japan, are embedded within marine siliciclastics of the lower Miocene Taishu Group and represent the earliest evidence of hydrocarbon seepage in the Sea of Japan. In contrast to Miocene and Pliocene examples from Honshu, which are often found above anticlines, the seeps from Tsushima formed within a pull-apart basin before major anticlines had formed. The three carbonates from Fukuzaki, Kanoura and Tanohama are composed chiefly of calcite, with significant admixture of ankerite only at Kanoura. The stable carbon isotope composition of calcites (δ ¹³ C as low as −40.2 ‰ VPDB for Fukuzaki, −41.8 ‰ VPDB for Kanoura, and −52.8 ‰ VPDB for Tanohama) indicate methanogenic origin of the carbonates. Textures of these deposits, including radiaxial and yellow cements, are indicative of formation at a methane seep. The stable oxygen isotope composition of calcites (δ ¹⁸ O values as low as −14.4 ‰ VPDB for Fukuzaki, −14.5 ‰ VPDB for Kanoura and −13.9 ‰ VPDB for Tanohama) indicate that they were influenced by burial fluids. Burial diagenesis is also indicated by the stable isotopic compositions of ankerite (δ ¹³ C ranging from −19.1 ‰ to −7.1 ‰ VPDB, δ ¹⁸ O from −11.1 ‰ to −9.7 ‰ VPDB). Molecular fossils from Tanohama comprise n -alkanes with short-chain predominance, interpreted to have formed due to thermal cracking of organic matter. The carbonates yield a chemosynthesis-based community comprising vesicomyids Pleurophopsis chitanii , P. cf. hamuroi , the bathymodiolin ‘ Bathymodiolus ’ akanudaensis , the lucinid Lucinoma sp. and the provannid Provanna ? sp., which have never been hitherto identified. ‘ Bathymodiolus ’ akanudaensis , Lucinoma sp. and Provanna ? sp. are the oldest records of these taxa in the Sea of Japan.
... Remarks.-Bathymodiolus labayugensis differs from the Miocene Bathymodiolus heretaunga Saether, Little, Camp- bell, Marshall, Collins, Alfaro, 2010b, from seep deposits in New Zealand by having the umbones in a more anterior position (Saether et al. 2010b). Two fossil Bathymodiolus species have been reported from the fossil record of Japan, the Oligocene Japanese "Bathymodiolus" inouei Amano and Jenkins, 2011 and the Miocene Bathymodiolus akanudaensis (Kuroda, 1931); both have a more angular and more anteriorly situated transition from dorsal to posterior margin compared to B. labayugensis (Kuroda 1931;Amano and Jenkins 2011). The Middle to Late Miocene "Bathymodiolus" moroniae from the "Calcari a Lucina" seep deposits in Italy (Kiel and Taviani 2017) differs from B. labayugensis by having a straight dorsal margin, in contrast to the curved one of B. labayugensis. ...
Article
Full-text available
We report 35 molluscan species from Late Miocene cold-seep carbonates from the Amlang Formation in the Ilocos�Central Luzon Basin in Luzon Island, Philippines, collected in a large quarry in the province of Pangasinan. The 19 bivalve species are largely representatives of chemosymbiotic families; the six new species are the nuculid Acila (Truncacila) interferencia sp. nov., the mytilid Bathymodiolus labayugensis sp. nov., the thyasirid Conchocele pan�gasinanensis sp. nov., the lucinid Megaxinus gorrospei sp. nov., the vesicomyid Pliocardia ballesterosi sp. nov., and Sisonia frijellanae gen. et sp. nov., of uncertain taxonomic affinity. The 16 gastropods include one species restricted to seep deposits, the neritid species Thalassonerita hagai sp. nov.; the buccinid Enigmaticolus semisulcata represents the first fossil record of its genus. Biogeographically, the Pangasinan seep fauna shows several links to Neogene seep faunas in other tropical/subtropical areas, namely the Mediterranean and Caribbean regions. In contrast, shared taxa with nearby but extratropical Japan are few, as are shared taxa with Miocene seep deposits in New Zealand.
... This is in remarkable contrast to the bathymodiolin mussels, the other major group of seep-inhabiting bivalves. At least one bathymodiolin species, "Bathymodiolus" inouei Amano and Jenkins, 2011, occurred in both Japan and Washington during the Oligocene (Amano and Jenkins 2011;Kiel and Amano 2013), but no bathymodiolin species is shared between the two regions today (Duperron 2010;Lorion et al. 2013;McCowin et al. 2020). Reasons for these contrasting patterns remain to be investigated. ...
Article
Full-text available
We describe a new genus of the chemosymbiotic bivalve family Vesicomyidae, Squiresica, for two Oligocene species, previously assigned to Archivesica, from western North America. Squiresica is characterized by a small and weakly inflated shell, a small to nearly absent pallial sinus, an Archivesica-like hinge dentition, with an indistinct to well incised lunular incision. Two species are assigned to this new genus: the type species, S. knapptonensis from western Washington State, USA, and S. marincovichi from Oligocene strata of Alaska, USA. Squiresica knapptonensis had previously been described from the upper Oligocene of the Lincoln Creek Formation; further specimens are here reported from a newly discovered seep deposit in the lower Oligocene part of the Lincoln Creek Formation.
Chapter
This chapter summarizes information about ancient hydrocarbon seeps from around the world. The information is organized into two tables, one comprising both Americas and Antarctica, the other Africa, Arctic, Asia, Europe, and New Zealand. Within each table, entries are organized by continent, and within the continent, by country, region, and state. Each entry contains the following information: the site, including locality information and geological formation, the age, the geologic context, the inferred water depth at which the seeps developed, a description of the deposits, the minimum reported value of δ13C of the seep carbonates if they have been analyzed, whether biomarkers have been reported, a description of the fauna, and relevant references.KeywordsBathymetryCarbonateChemosynthesisDeep seaEvolutionHydrocarbonsPhanerozoicSedimentary basin
Chapter
Bivalves are an important part of the methane seep fauna ever since seeps appeared in the geologic record. The chronostratigraphic ranges of seep-inhabiting chemosymbiotic bivalves show an overall increase in diversity at seeps since the Paleozoic. The most common group at Paleozoic and early Mesozoic seeps are modiomorphids, with a few additional records of solemyids and anomalodesmatans. The most common infaunal chemosymbiotic bivalve taxa at modern seeps, lucinids and thyasirids, appeared at seeps in the Late Jurassic and earliest Cretaceous. They diversified during the Cretaceous synchronous with the peak of the “Mesozoic Marine Revolution” and first occurrences of gastropod predatory drill holes in the shells of seep-inhabiting bivalves, soon after the appearance of these gastropods in the mid-Cretaceous. The two dominant bivalve clades of the modern vent and seep fauna, bathymodiolins and vesicomyids, appeared in the Eocene. Their origin has been linked to a deep-water extinction event at the Paleocene-Eocene Thermal Maximum. However, the fossil record of chemosymbiotic bivalves at seeps during this time interval does not display any extinction. Rather, the mid-Eocene appearance of semi-infaunal and epifaunal bivalves such as bathymodiolins and vesicomyids might be linked to a dramatic rise in seawater sulfate concentrations at this time.KeywordsBivalvesChemosymbiosisEvolutionSulfate concentrationMesozoic marine revolutionSolemyidaeNucinellidaeBathymodiolinaeModiomorphidaeKalenteridaeLucinidaeThyasiridaeVesicomyidaeAnomalodesmatas
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A total of 25 species of mollusks and crustaceans are reported from Oligocene seep deposits in the Talara Basin in northern Peru. Among these, 12 are identified to the species-level, including one new genus, six new species, and three new combinations. Pseudophopsis is introduced for medium-sized, elongate-oval kalenterid bivalves with a strong hinge plate and largely reduced hinge teeth, rough surface sculpture and lacking a pallial sinus. The new species include two bivalves, three gastropods, and one decapod crustacean: the protobranch bivalve Neilo altamirano and the vesicomyid bivalve Pleurophopsis talarensis; among the gastropods, the pyropeltid Pyropelta seca, the provannid Provanna pelada, and the hokkaidoconchid Ascheria salina; the new crustacean is the callianassid Eucalliax capsulasetaea. New combinations include the bivalves Conchocele tessaria, Lucinoma zapotalensis, and Pseudophopsis peruviana. Two species are shared with late Eocene to Oligocene seep faunas in Washington state, USA: Provanna antiqua and Colus sekiuensis; the Talara Basin fauna shares only genera, but no species with Oligocene seep fauna in other regions. Further noteworthy aspects of the molluscan fauna include the remarkable diversity of four limpet species, the oldest record of the cocculinid Coccopigya, and the youngest record of the largely seep-restricted genus Ascheria. Eucalliax is recorded for the first time from a seep and from the Oligocene.
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Brachiopods were thought to have dominated deep-sea hydrothermal vents and hydrocarbon seeps for most of the Paleozoic and Mesozoic, and were believed to have been outcompeted and replaced by chemosymbiotic bivalves during the Late Cretaceous. But recent findings of bivalve-rich seep deposits of Paleozoic and Mesozoic age have questioned this paradigm. By tabulating the generic diversity of the dominant brachiopod and bivalve clades–dimerelloid brachiopods and chemosymbiotic bivalves–from hydrocarbon seeps through the Phanerozoic, we show that their evolutionary trajectories are largely unrelated to one another, indicating that they have not been competing for the same resources. We hypothesize that the dimerelloid brachiopods generally preferred seeps with abundant hydrocarbons in the bottom waters above the seep, such as oil seeps or methane seeps with diffusive seepage, whereas seeps with strong, advective fluid flow and hence abundant hydrogen sulfide were less favorable for them. At methane seeps typified by diffusive seepage and oil seeps, oxidation of hydrocarbons in the bottom water by chemotrophic bacteria enhances the growth of bacterioplankton, on which the brachiopods could have filter fed. Whereas chemosymbiotic bivalves mostly relied on sulfide-oxidizing symbionts for nutrition, for the brachiopods aerobic bacterial oxidation of methane and other hydrocarbons played a more prominent role. The availability of geofuels (i.e. the reduced chemical compounds used in chemosynthesis such as hydrogen sulfide, methane, and other hydrocarbons) at seeps is mostly governed by fluid flow rates, geological setting, and marine sulfate concentrations. Thus rather than competition, we suggest that geofuel type and availability controlled the distribution of brachiopods and bivalves at hydrocarbon seeps through the Phanerozoic.
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The trochid archaeogastropod Margarites ( Pupillaria ) columbiana n. sp., the mytilid bivalve Modiolus ( Modiolus ) willapaensis n. sp., and the vesicomyid bivalve Calyptogena chinookensis n. sp. are described from the earliest known fossil communities associated with subduction-related methane seeps. The communities are in very localized limestones of late middle to late Eocene age along the southwestern margin of Washington. These limestones contain large numbers of chemosynthetic bivalves and worm tubes, as well as other macrobenthos, that colonized around cool-temperature methane seeps along the landward slopes of an ancient subduction-zone complex. Calyptogena chinookensis n. sp.is the earliest known species of this genus, which was previously known from Miocene to Recent.
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Densely populated communities of soft-bottom-dwelling taxa similar to those found today along subduction zones off the coasts of Japan and Oregon have been discovered in very localized deep-water limestones of late middle to late Eocene age along the southwestern margin of Washington. Subduction was prevalent in this area during this time, and compressive forces squeezed subsurface methane-rich waters onto the ocean floor, where opportunistic bivalves (especially Modiolus, Calyptogena, and Thyasira), vestimentiferan tube worms, serpulid tube worms, siliceous sponges, very small limpets, trochid and turbinid archaeogastropods, and other macrobenthos colonized. These assemblages are the earliest recorded biologic communities formed in response to methane seeps in subduction zones.