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HERPETOLOGICA
VOL. 65 JUNE 2009 NO. 2
Herpetologica, 65(2), 2009, 115–128
E
2009 by The Herpetologists’ League, Inc.
TAXONOMIC FREEDOM AND THE ROLE OF OFFICIAL LISTS OF
SPECIES NAMES
GREGORY B. PAULY
1,2
,DAVID M. HILLIS, AND DAVID C. CANNATELLA
Section of Integrative Biology and Texas Natural Science Center, 1 University Station C0930, University of Texas,
Austin, TX 78712, USA
A
BSTRACT: The sixth edition of the Scientific and Standard English Names of Amphibians and Reptiles of
North America (Crother, 2008, SSAR Herpetological Circular 37:1–84) is the ‘‘Official Names List’’ for the
three major North American herpetological societies. Although this publication is intended to aid users of
scientific and common names, we argue that current practices for authoring, reviewing, and using this list, in
some cases, generate taxonomic chaos. By this we mean that users are uncertain of which name to use and/or
the rationale for using a particular name, and efficient communication is hindered by this confusion. Most
importantly, through inadequate and inconsistent review of this list, the societies have endorsed unnecessary
and arbitrary name changes and are uncritically promoting individual taxonomic viewpoints when a clear
choice on the most appropriate name has not been reached by the community. This problem is exemplified
by North American anurans for which 57 of the 100 species have scientific names (i.e., genus-species
combinations) different from the previous version of the list. Forty-eight of these new combinations result
from changes to the genus name, and there is controversy over the proposed genus names for at least 43 of
these. Despite this controversy and that a stated goal of the list is to report on such controversies, the
alternative names are not discussed. As a result, for these taxa, the list fails to provide adequate information
for users to make informed decisions on name usage. Here, we examine the role of such lists in taxonomy.
Although we specifically focus on the arbitrary changes to the names of North American Bufo and Rana, the
continuation of current practices for generating the list will promote instability and taxonomic confusion on a
broader scale. We conclude with recommendations for improving the utility of such lists and for avoiding
unnecessary taxonomic chaos.
Key words: Bufo; Rana; Species names; Taxonomic stability
THE LAST decade’s flood of new phylogenies
has rewritten our understanding of phyloge-
netic relationships and taxonomy of amphib-
ians and reptiles. Publication of the sixth
edition of the Scientific and Standard English
Names of Amphibians and Reptiles of North
America (Crother, 2008; hereafter referred to
as ‘‘the list’’) brings this issue to the forefront.
The sixth edition is sponsored by the three
major North American herpetological socie-
ties: the American Society of Ichthyologists
and Herpetologists (ASIH), the Herpetolo-
gist’s League (HL), and the Society for the
Study of Amphibians and Reptiles (SSAR).
Although the authors, editors, and sponsoring
herpetological societies have changed since
the first edition (Collins et al., 1978), the list’s
primary motivation is the same: to standardize
and stabilize common names and thereby
promote efficient communication. (We will
use ‘‘common name’’ rather than ‘‘standard
English name’’ as our points are relevant to all
lists of common names and not just those that
stabilize standard English names; see Crother
[2007] for a discussion of these terms.)
Although standardizing common names was
the reason the list was conceived (see Conant
1
PRESENT ADDRESS: Department of Evolution and
Ecology, and Center for Population Biology, University
of California, Davis, California 95616, USA.
2
CORRESPONDENCE: e-mail, gbpauly@ucdavis.edu
115
et al., 1956), the list also has an increasingly
important role relevant to scientific names.
With the rapid growth of phylogenetic studies
and the concomitant increase in changes to
scientific names, the list has become ever
more important as a single, convenient
reference to current scientific names.
We argue, however, that some current
practices for authoring, reviewing, and using
this list result in a disservice to the field of
taxonomy and to users of scientific names. In
particular, there appears to be inadequate and
inconsistent review of proposed changes to
scientific names. Without extensive review,
the list may incorporate unnecessary taxo-
nomic changes at the authors’ whim (each
taxonomic section—frogs, lizards, etc.—is
authored by one to four individuals). Because
the list is endorsed by the three major North
American herpetological societies, a reader
might assume that any changes are broadly
supported by the society members, but, as we
detail below, this is not always the case.
Moreover, no evidence suggests that the
changes incorporated in the list even reflect
the consensus of the committee that compiled
the list. As a result, the list may promote
taxonomic instability and thwart the goals of
efficient communication and information re-
trieval that motivated its establishment.
Although the situation described above (i.e.,
society endorsement of unnecessary and
subjective name changes lacking a strong
consensus among taxonomic specialists) may
seem unlikely, we argue that this exact
scenario has occurred for the North American
anuran list (Frost et al., 2008) and is resulting
in unprecedented name instability for North
American frogs. More than half of the 100
species listed in Frost et al. (2008) have new
names. Of the 57 new combinations of anuran
names made between the 2000 and 2008 lists,
43 were recommended by Frost et al. (2006a)
in their monograph on amphibian phylogeny.
As suggested by several authors (Hillis, 2007;
Smith and Chiszar, 2006; Vences, 2007), and
as we show below, genus-name changes
proposed by Frost et al. (2006a) for the North
American anuran species are arbitrary and
unnecessary to reflect evolutionary history.
Nevertheless, these proposed changes are
incorporated into the anuran section of the
list, of which Frost is also the lead author
(Frost et al., 2008).
The list is one of the most far-reaching
contributions of the herpetological societies to
fellow professionals and the general public. It
is an important resource to legislators, law
enforcement personnel, amateur herpetolo-
gists and naturalists, and a diverse group of
professional biologists, including wildlife man-
agers and conservation biologists, journal
editors, authors of natural history lists and
publications, and managers of biological
databases (e.g., GenBank, HerpNet, Ency-
clopedia of Life, etc.). Given this huge user
group, all members of the societies have an
interest in ensuring that the list represents
the best available science and taxonomic
practice. In our opinion, this standard was
not met, at least in the case of the anuran
list, because it promotes individual view-
points that do not follow long-established
taxonomic principles.
This essay is intended to stimulate discus-
sion of both best practices in taxonomy and
how names lists can best benefit the scientific
and nonscientific user community. We first
examine the purpose of classification and the
role of stability. We argue that stability of the
genus-species combination (i.e., the ‘‘species
name’’ or ‘‘scientific name of the species’’
according to the Code; ICZN, 1999) should be
maintained, except in cases of nonmonophyly
of genera. In such cases, the number of
changes in genus-species combination should
be minimized. We also discuss the relation-
ship between phylogeny and taxonomy. We
then examine the purposes of standard lists
and discuss the importance of broad peer
review for evaluating proposed changes in lists
of scientific and common names. We demon-
strate ways to name taxa and provide addi-
tional phylogenetic information without
changing genus-species combinations; taxo-
nomic problems are addressed only as they
relate to the scientific names—the genus-
species combinations, rather than supragene-
ric names or controversies related to subspe-
cies status. Last, we explore how these issues
of instability and official lists are exemplified
with changes in the species names for North
American anurans, and we make general
recommendations to promote stability.
116 HERPETOLOGICA [Vol. 65, No. 2
STABILITY AND THE PURPOSE OF
BIOLOGICAL CLASSIFICATION
Modern biological classifications are gener-
ally recognized as having two principal goals
(Ashlock, 1979; Benton, 2000; Mayr, 1982;
Ross, 1974; Simpson, 1961). The first is to
function as a reference system (Ross, 1974).
As such, classifications facilitate communica-
tion; this is the practical or utilitarian purpose
of classification (Mayr, 1982). The second goal
is to reflect evolutionary history (Ashlock,
1979; de Queiroz, 1988, 1997). This is the
general or scientific goal of classification
(Mayr, 1982). The phrase ‘‘reflect evolutionary
history’’ requires clarification; some have
argued that both paraphyletic and monophy-
letic taxa reflect evolutionary history (e.g.,
Ashlock, 1979). However, we accept the
modern consensus that the phrase means that
taxon names, at least those above the species
level, refer only to monophyletic groups
(clades).
Obviously, there can be conflict in achiev-
ing these two goals. As noted by Cantino et al.
(1999:796), ‘‘the communication function of
nomenclature is best served if names remain
stable through time.’’ This is especially true
given that the nonexpert user community is
virtually unlimited (Kennedy et al., 2006).
Changes in species names require that all
users (academic and professional biologists,
amateur biologists, laypersons, etc.) learn new
names to communicate about the taxon of
interest. Furthermore, name changes separate
a species from its previous literature. There-
fore, users must also maintain a record of the
previous name to access published informa-
tion. Clearly, reducing stability and familiarity
of classifications simultaneously diminishes
their utility.
Absolute stability, however, is not desirable
because it would hinder the scientific goal of
reflecting evolutionary relationships. As new
phylogenetic information becomes available,
changes to names may be necessary to reflect
an increased understanding of evolutionary
relationships. This conflict in simultaneously
meeting the two principal goals of classifica-
tion has been long recognized by taxonomists
(e.g., Mayr et al., 1953; Simpson, 1961). For
example, Simpson (1961:112) argued, ‘‘there
must be some compromise between the
usefulness of up-to-date classifications and
the usefulness of stable classifications.’’
The scientific name of the species is the
primary token by which biologists refer to a
particular species. Given this, our view is that
changes to the genus name should be avoided,
except in cases of nonmonophyly (or where
demanded by the Principle of Priority, which
will not be discussed further). Even then, the
number of changes to scientific names should
be minimized. We recognize that informatics
systems are increasingly better at mapping
equivalencies between different taxonomic
reference systems (Kennedy et al., 2006),
but even the best informatics system will not
eliminate the need to communicate using
generally understood names. To ignore the
goal of stability is to deny the role of biological
classifications as general reference systems for
all end users.
T
HE CONNECTION BETWEEN PHYLOGENY
AND
CLASSIFICATION
It is generally accepted that classification
should reflect phylogeny, but classifications
differ from phylogenies in at least two ways.
First, a classification is usually an incomplete
representation of phylogeny, because only a
subset of branches of the Tree of Life are
named. Second, one phylogeny can yield
many different but equally informative classi-
fications.
So, which branches of a phylogeny should
be named? In most cases we start not from a
blank slate, but from existing classifications.
New hypotheses of evolutionary relationships
may require taxonomic changes to maintain
monophyletic taxa. How should classifications
be revised, when change is required by
nonmonophyly? A common-sense approach
was well-articulated by Simpson (1961:112):
‘‘A published classification in current use
should be changed when it is definitely
inconsistent with known facts and accepted
principles, but only in so far as necessary to
bring it into consistency.’’ In the language of
modern phylogenetics, ‘‘known facts and
accepted principles’’ suggests well-established
and strongly supported clades that are in-
ferred under multiple analyses and from
various data sources, a view echoed by the
Turtle Taxonomy Working Group (2007) and
June 2009] HERPETOLOGICA 117
the American Ornithologists’ Union (1998) in
their discussions of protocols for revising
classifications. Changing names based on
poorly supported branches, or for issues
unrelated to monophyly, is ill advised and
counter to the goals of biological classification
(Cantino et al., 1999; Gaffney, 1979; Godfray
and Knapp, 2004; Mayr, 1982; Simpson,
1961).
But Simpson’s rule of thumb is just that—a
rule of thumb. It is up to the biological
community to evaluate whether proposed
changes promote the goals of classification.
If they do, such proposals should be adopted.
However, if proposed changes generate un-
necessary instability, then they should be
disregarded. Importantly, all users of names
have the opportunity to make these decisions.
Although many users of scientific names
follow the most recent proposal or most
recent taxonomic revision, there is no obliga-
tion to do so, and doing so, may contribute
even further to taxonomic instability.
As secondary literature, names lists, espe-
cially those sponsored by scientific societies,
should state the current scientific name, or, in
cases where there may be alternatives, state
these names and a brief summary of the
rationale for each with relevant citations. We
explicitly reject promotion of an individual
viewpoint by authors of lists, and especially of
their own taxonomic proposals. Likewise, we
do not wish to replace that imposed system
with our own. Rather, the herpetological
community at large should be invested in the
process of evaluating alternative classifica-
tions. Because numerous classifications of
differing taxonomic stability may result from
one phylogeny, the choice of which taxonomy
best serves the purposes of biological classi-
fication is too important to be left only to
taxonomists.
T
HE ROLE OF STANDARD LISTS
Standard names lists should serve multiple
functions that help to achieve both principal
goals of classification:
1. Standard lists stabilize common names so
that a diversity of end-users will use the
same names for the same organisms even
though no codes govern the use of
common names. Thus, standard lists
facilitate communication, a basic goal of
classification.
2. Lists of scientific names also help to
ensure that classifications reflect evolu-
tionary history. Phylogenetic studies may
suggest that the existing taxonomy is
inconsistent with phylogenetic relation-
ships. Thus, updated classifications pro-
vide an important format for disseminat-
ing the results of specialized phylogenetic
research to a broad audience (see Hillis,
2007, for further discussion).
There is also a more general role for lists
endorsed by professional societies or agencies.
These lists are viewed as authoritative, pre-
sumably because users assume that the names
reflect the general consensus of the societies’
membership or at least the consensus of the
taxonomic specialists within that society. As a
result, these lists are an important resource to
authors of more regional lists and publications
(e.g., conservation and management agency
lists, field guides, etc.) and may guide name
usage in these works. Given this role, authors,
editors, reviewers, and sponsoring organiza-
tions of such lists must recognize that they are
a relatively small group whose decisions on
content impact a huge audience. These
decisions also determine whether a list will
promote or hinder the goals of classification.
Thus, it is critical that these individuals work
to ensure that classifications reflect the best
information available and simultaneously re-
spect the interests and needs of the diverse
user community. Importantly, lists should not
restrict taxonomic freedom, including future
debate on the most appropriate taxonomy.
Below, we explore these issues by examining
(1) taxonomic freedom, and (2) peer review/
evaluation of names lists.
T
HE USE OF LISTS TO LEGISLATE TAXONOMY
The fifth and sixth editions of the list
(Crother, 2000, 2008) were the first designat-
ed as the ‘‘Official Names List.’’ More
specifically, the title page of the fifth edition
states that the list is ‘‘officially recognized and
adopted by the SSAR, ASIH, and HL’’ while
the phrase ‘‘Official names list of the ASIH,
HL, and SSAR’’ is on the front cover of the
118 HERPETOLOGICA [Vol. 65, No. 2
sixth edition. Use of the word ‘‘official’’
designates that the list is a publication of the
sponsoring societies and distinguishes it from
lists generated by other organizations and
agencies. However, some readers may misin-
terpret the word ‘‘official’’ as implying that the
scientific names are regulated by the societies;
that is, the list may be misinterpreted as a list
of official names (e.g., Stuart, 2008).
We argue that no scientific society should
suggest or imply that they are regulating
scientific names because such regulation is
counter to the spirit of the International Code
of Zoological Nomenclature (ICZN, 1999).
Indeed, the first principle of the Code
(1999:XIX) states, ‘‘The Code refrains from
infringing upon taxonomic judgment, which
must not be made subject to regulation or
restraint.’’
This concept of taxonomic freedom is
important. The Code (1999:119) defines a
‘‘taxonomic taxon’’ as
‘‘A taxon (e.g., family, genus, species) includ-
ing whatever nominal taxa and individuals a
zoologist at any time considers it to contain in
his or her endeavour to define the boundaries
of a zoological taxon (q.v.).’’
This delineation of the ‘‘taxonomic taxon’’ is
known as the Taxon Concept (Kennedy et al.,
2006): the mapping of a taxon name to a
publication stating the author’s opinion of the
taxon’s content. According to the Code, an
author is free to decide the content of a taxon,
or taxon concept, even without regard to data
or published literature. On one hand, an
individual may propose a bewildering number
of new names. Although such action would be
highly irresponsible, the formal rules of
nomenclature do not prevent it. On the other
hand, taxonomic freedom also allows each
individual to ignore published proposals.
Presumably, because users want to be up-to-
date with the latest research, an extremely
common misconception is that the most
recent taxonomy must be followed. However,
nothing in the Code obliges or encourages
authors, editors, or other users to do this.
So how do we reconcile taxonomic freedom
with the goal of stability? We feel that
‘‘taxonomy by informed consensus’’ is a good
descriptor of the process by which nomencla-
tural changes are accepted by the community
of biologists, and we support this process.
Given two competing taxonomic arrangements,
a user ideally should select the one that
promotes the goals of classification (to facilitate
communication and indicate evolutionary his-
tory) and whenever possible maintains stability
and familiarity. Preferably, the user should
justify the choice of taxon concept in publica-
tion. As more users make their opinions known,
a consensus will emerge.
Taxonomy by informed consensus might
collapse for several reasons. First, nonsyste-
matist users are unlikely to be familiar with, or
equipped to assess, the pertinent taxonomic
literature and may therefore make ill-in-
formed choices. Second, uncritical acceptance
of the most recent published classification,
simply to be current, will destabilize taxonomy
and hinder broader communication. Third,
the enforcement of a particular name by
editors when there is debate over the most
appropriate choice prevents discussion and
evaluation of taxonomic proposals.
This third point is especially important.
Inclusion in the list may suggest to many users
that only these names are acceptable for use.
Although there are no formal requirements in
most society journals that authors follow the
names in the list, authors may feel obligated to
comply simply because these names are in the
society-sponsored list. One exception is Her-
petological Review, in which authors of
natural history and geographic distribution
notes are explicitly required to follow the
names in this list (this requirement dates back
to Volume 10, 1979, the first volume following
the publication of the SSAR’s first common
and scientific names list [Collins et al., 1978]).
Similarly, editors of nonherpetological jour-
nals may require that authors also follow the
list. Thus, if the list presents a one-sided
viewpoint, then the authors of the list, and the
endorsing societies, are effectively, if uninten-
tionally, legislating taxonomy. This result is
counter to the way in which taxonomy as a
field should function. In our view, the list
should strive to summarize the current state of
nomenclature for each taxon, which should
include discussing multiple names if alterna-
tives exist.
June 2009] HERPETOLOGICA 119
Interestingly, early versions of the list
recognized that such lists might restrict
taxonomic freedom. The first attempt by a
North American herpetological society to
standardize common names was undertaken
by the Committee on Herpetological Com-
mon Names of the ASIH; this effort followed
the ASIH-sponsored checklist of scientific
names by Schmidt (1953). The authors made
‘‘the list informaland as free as possible from the
legalistic practices that have plagued binomial
nomenclature’’ (Conant et al., 1956:172). The
names in this list were given ‘‘no official status,
and their use (was) in no way compulsory’’
(p. 172). The goal was simply to promote more
efficient communication. The current list
(Crother, 2008) is a direct outgrowth of this
ASIH list. Although the current list is also not
intended to be compulsory, some users may not
recognize this.
P
EER REVIEW AND EVALUATION OF THE
NAMES LIST
Balancing the dual goals of stability and
conveying phylogenetic information is no easy
task. This challenge requires input from a
broad group of biologists, because the need
for a general consensus makes this task too
important to be left only to taxonomists. Even
though taxonomists have the primary expert
knowledge, scientific names should serve the
entire community. We suggest that the
protocols of the Committee on Standard
English and Scientific Names (the joint
committee that published Crother, 2000,
2008) for evaluating proposed name changes
are inadequate because some individual view-
points have been promoted to the exclusion of
alternatives that maintain both stability and
phylogenetic information.
A list of names is a snapshot in time
whereas taxonomic debates about names
occur over long periods. At any point, a clear
consensus on the most appropriate names may
not exist. Crother (2000, 2008) recognized the
importance of providing information on com-
peting proposals and specifically included
‘‘comments regarding confidence in our un-
derstanding.’’ We agree that this is a very
useful contribution. Unfortunately, such com-
ments are inconsistently used across taxonom-
ic sections. For example, de Queiroz and
Reeder (2008) provide informative discussions
of recent taxonomic changes to North Amer-
ican skinks (Plestiodon, formerly Eumeces) and
whiptails (Aspidocelis, formerly Cnemido-
phorus). However, such discussions are mini-
mal for controversial changes in the anuran
section (Frost et al., 2008). Of the 57 new
combinations of anuran species names made
between the 2000 and 2008 lists, 43 were
proposed in an earlier publication by the same
lead author (Frost et al., 2006a). Several
publications have argued against these propos-
als (e.g., Smith and Chiszar, 2006; Hillis, 2007),
but these objections were largely ignored by
Frost et al. (2008). Clearly, the list of anuran
names does not reflect the current state of
anuran taxonomy or the opinions of taxono-
mists who have published phylogenies or
taxonomic revisions for the relevant groups.
Thus, the list fails to elucidate the available
alternatives and provides but a single view-
point. In our opinion, authors of this list should
not arbitrate taxonomic controversies, and the
herpetological societies should not endorse lists
that attempt to do so. In the case of the current
list, and specifically Frost et al. (2008), we feel
that the inconsistent approach to dealing with
proposed taxonomic changes and the failure to
catch these inconsistencies in the review
process demonstrate that the protocol for
authoring, editing, and reviewing this list needs
to be revised.
The protocol for evaluating proposed nomen-
clatural changes has changed dramatically over
the six editions of the list. At present (Crother,
2008), one to four authors establish the list for
their subsection (e.g., frogs, lizards, etc.),
including decisions about proposed changes to
standard English and scientific names. The list is
then reviewed by a small number of herpetol-
ogists. As discussed above, we believe that this
review was inadequate. Given the importance of
this list (and other similar lists of various taxa),
we suggest that the review process be expanded
to ensure that the list discusses current alterna-
tive names if these exist.
Our concern about lack of community input
and prevalence of individual viewpoints ex-
tends to other lists as well. For example, ITIS
is the Integrated Taxonomic Information
System, a partnership of several U.S. federal
agencies, including the Environmental Pro-
120 HERPETOLOGICA [Vol. 65, No. 2
tection Agency, Department of the Interior,
and the National Museum of Natural History.
The ITIS website lists the data stewards for
North American amphibian species as Roy
McDiarmid and Darrel Frost, two of the three
authors of the anuran section of the list. The
goal of ITIS
‘‘is to create an easily accessible database with
reliable information on species names and
their hierarchical classification.’’ (www.itis.
gov/info.html)
And further,
‘‘…ITIS is meant to serve as a standard to
enable the comparison of biodiversity datasets,
and therefore aims to incorporate classifica-
tions that have gained broad acceptance in the
taxonomic literature and by professionals who
work with the taxa concerned.’’ (www.itis.gov/
standard.html)
Just as with the Crother list, the ITIS list
will likely influence other lists and publications.
Such lists and the communities they serve will
benefit from a broad review and greater focus
on increasing taxonomic stability.
S
TABILITY AND PHYLOGENETIC INFORMATION:
E
XAMPLES FROM BUFO AND RANA
Normally, changes to classifications result
from new discoveries of taxon relationships. It
is worth noting that the 43 changed species
names for the North American Bufo and Rana
represent no discoveries of new clades by
Frost et al. (2006a). The phylogenies of North
American Bufo and Rana had been previously
resolved and sampled more thoroughly by
Pauly et al. (2004; all 22 species of Bufo)and
by Hillis and Wilcox (2005; 25 of 28 extant
species of Rana; the 3 unsampled species were
all formerly treated as subgroups of sampled
taxa). For the North American species, Frost
et al. (2006a) sampled only 9 species of Bufo
and 12 species of Rana.
Frost et al. (2006a) provided a general
motivation for dismantling paraphyletic
groups and a specific rationale for proposed
changes to Bufo:
‘‘A serious impediment in amphibian biology,
and systematics generally, with respect to
advancing historically consistent taxonomies,
is the social conservatism resulting in the
willingness of many taxonomists to embrace, if
only tacitly, paraphyletic groupings, even
when the evidence exists to correct them.
The reason for this is obvious. Recognizing
paraphyletic groups is a way of describing trees
in a linear way for the purpose of telling great
[emphasis theirs] stories and providing favored
characters a starring role.’’ (p. 12).
‘‘A complete remedy of the polyphyly/para-
phyly of Bufo is beyond the scope of this study,
although we take limited actions to start this
inevitable process. We could place all of the
names that are demonstrably derived from
‘Bufo’ into the synonymy of Bufo, thereby
providing a monophyletic taxonomy. Howev-
er, because much of this paraphyly was
understood in 1972 (various papers in Blair,
1972a), it is clear that social inertia is standing
in the way of progress. We judge that progress
will require the partition of ‘Bufo’ into more
informative natural units.’’ (p. 214)
Frost et al. (2006a) considered the parti-
tioning of the paraphyletic genus Bufo into
smaller generic units to be ‘‘progress.’’ Here,
progress is confused with change. We feel this
proposed change demands needless taxonom-
ic chaos at the expense of stability. Certainly,
we do not oppose naming newly discovered
clades, but the solution offered by Frost et al.
(2006a) and mirrored in Frost et al. (2008) is not
the only one. There are two general classes of
solutions for resolving the paraphyly of Bufo.
One is to break Bufo up into smaller monophy-
letic taxa at the same rank. A second is to retain
Bufo as a large group and to subsume within it
the taxa that make Bufo paraphyletic. This can
be done either by reducing the rank of the
smaller clades or using unranked taxa.
Frost et al. (2006a) favored the first option,
dismantling Bufo into smaller genera. As
quoted above, part of their justification is that
recognition of a greater number of smaller
genera is more ‘‘informative,’’ meaning that
more clades are named. However, the second
option also results in at least as many named
clades. Moreover, the second option contains
more information: a larger genus Bufo is now
monophyletic as are the smaller infrageneric
taxa. Both subgenera and unranked infrage-
neric taxa have been used increasingly (e.g.,
June 2009] HERPETOLOGICA 121
FIG. 1.—Phylogenies of Bufo from (A) a maximum likelihood re-analysis of Frost et al.’s (2006a) 12S–16S data for the
bufonids and (B) Frost et al. (2006a). The likelihood analysis was conducted on a secondary structure based alignment.
Support values are Bayesian posterior probabilities from 16,000 post burn-in trees. The Bayesian analysis used two runs
of four Markov chains each with each run lasting ten million generations and trees sampled once every 1000 generations.
In (B), support values are from a parsimony jackknife with 37% deletion of Frost et al’s 12S–16S data for the bufonids
(the deletion percentage was chosen to mimic Frost et al’s. [2006a] analyses, although they did not report the specific
122 HERPETOLOGICA [Vol. 65, No. 2
Brandley and de Queiroz, 2004; Hillis and
Wilcox, 2005; Leache
´
and McGuire, 2006),
and this solution maintains stability without
sacrificing informativeness.
The solution espoused by Frost et al. (2008)
for North American Rana is even more
egregious in its subjectivity. Frost et al.
(2008) arbitrarily divided the clade of Laur-
asian Rana species recovered by Hillis and
Wilcox (2005) and Hillis (2007) into two
genera, Rana and Lithobates. This action is
not necessitated by the phylogenetic analysis,
it does not remove any paraphyletic groups, it
provides no new phylogenetic information
beyond that in Hillis and Wilcox (2005), and
it unnecessarily promotes taxonomic instabil-
ity and confusion (Hillis, 2007; Smith and
Chiszar, 2006). Furthermore, the clades called
Rana and Lithobates by Frost et al. (2008) are
both inconsistently supported across analyses
of various data sets (as discussed by Hillis and
Wilcox, 2005). In contrast, support for the
monophyly of the two combined groups (Rana
sensu Hillis, 2007) is consistent and strong.
Hillis (2007) suggested that Rana be
retained for all North American ranids and
that Lithobates be recognized as one of
several subclades of Rana. This proposal
retains the existing species names but also
provides more information about the phylog-
eny of these frogs. Hillis and Wilcox (2005)
originally defined Lithobates as a subclade
equivalent to the Rana palmipes species
group, and treated this taxon as a subgenus
under the Linnean system. Moreover, this
taxon concept of Lithobates is much more
restricted than the genus called Lithobates by
Frost et al. (2006a). The brief comments in
Frost et al. (2008) give the reader no hint of
these issues.
Alternative Proposals for Bufo and Rana
Interestingly, the various groups of authors
within Crother (2008) chose very different
taxonomic strategies. In contrast to Frost et al.
(2008), de Queiroz and Reeder (2008) made
the sensible decision to recognize the sub-
clades of Phrynosoma proposed by Leache
´
and McGuire (2006). Thus, stability of the
well-known genus is retained, but additional
phylogenetic information is available (e.g.,
Phrynosoma (Anota) solare).
The proposal we advocate for Bufo and
Rana is similar to that of Hillis (2007) and de
Queiroz and Reeder (2008): a hybrid system
using ranked scientific names to maintain
stability, and unranked names to convey
additional phylogenetic information. This ap-
proach combines features of the Zoological
Code and of phylogenetic nomenclature
(Cantino et al., 1999; de Queiroz and Gau-
thier, 1992). Authors who prefer completely
ranked taxonomies can follow these same
recommendations, treating the unranked
names as taxa of infrageneric rank.
Bufo.—The North American bufonids
treated by Frost et al. (2008) as the genera
Rhinella, Ollotis, and Anaxyrus form a well-
supported clade termed the New World Clade
by Pauly et al. (2004). The sister taxon to this
clade, however, is not strongly supported in
any study. Despite the apparently strong
support values reported by Frost et al.
(2006a), the support for relationships among
these clades (Fig. 1) is an artifact of their
unusual analysis parameters (low gap cost,
treating gaps as a fifth character, and a
jackknife deletion setting of 37%, all of which
inflate support values relative to standard
approaches such as the bootstrap and jack-
knife analysis with 50% deletion). Our re-
analysis of their 12S–16S bufonid data (from
D. C. Cannatella and G. B. Pauly, unpub-
lished data; sequence data aligned in CLUS-
TALX with modifications based on secondary
structure, as in Pauly et al. [2004] followed by
model-based analyses in GARLI [Zwickl,
2006] and MrBayes 3.1.1 [Ronquist and
Huelsenbeck, 2003]) suggests that B. bufo is
the sister taxon of the New World Clade
r
value). This re-analysis was conducted on the identical sequence data as examined in (A), but the alignment is taken
directly from Frost et al. (2006a). Asterisks indicate support values of 100. Classifications recommended by us (A) and by
Frost et al. (2006a, 2008) (B) are shown. Shaded boxes denote the New World Clade (sensu Pauly et al., 2004). See
Appendix I for synonymy of Ollotis with Incilius.
June 2009] HERPETOLOGICA 123
(Fig. 1A). Similarly, results from Pauly et al.
(2004), Pramuk (2006), and Pramuk et al.
(2007), indicate that (1) the New World Clade
sensu Pauly et al. (2004) is very strongly
supported; this clade includes all of the North
American species of the list; and (2) the New
World Clade is closely related to, or the sister-
group of, the Bufo bufo species group.
Therefore, we delimit Bufo as minimally
including the New World Clade (115 species)
and the Bufo bufo species group (Fig. 1).
Thus, a large number of the species names are
returned to their previous combinations.
Although our taxonomic action here recogniz-
es a larger Bufo, no phylogenetic information
is lost because we regard Anaxyrus, Incilius
(see Appendix I for synonymy of Ollotis as
Incilius), and Rhinella simultaneously as
subgenera and named clades within Bufo.
We defer formal definitions of the clade
names pending a re-classification of all
Bufonidae in progress. At the moment, the
exhaustive content of Bufo as we delimit it is not
clear, because of the uncertain phylogenetic
position of some clades. But we note that Frost
et al. (2006a) also retained about two dozen
species as ‘‘Bufo’’ because of uncertain affini-
ties. Our proposal is only partly satisfactory, and
as taxon sampling and gene sampling is
increased, it may be that other clades are
returned to Bufo. Nonetheless, it is an improve-
ment over the classification of Frost et al.
(2006a, 2008) because taxonomic stability is
enhanced without sacrificing phylogenetic in-
formation.
To be clear, our advocacy of a larger Bufo is
not based on social conservatism (see above),
sentimentality for paraphyletic groups (none
are recognized), telling great stories, or a
general preference for traditional approaches.
Rather, it is motivated solely by the desirabil-
ity for stability in classifications/taxonomies
provided that such stability does not sacrifice
phylogenetic information.
Rana.—For species of Rana, the taxonomy
recommended by Hillis (2007:Fig. 2) is com-
pletely consistent with the Code (contrary to
earlier concerns about some of these names
reported by Frost et al. [2006a]). It is
important to note that the different recom-
mendations by Hillis (2007) and Frost et al.
(2008) do not reflect any differences in
phylogenetic results. Indeed, the phylogeny
of virtually all species of North American
Rana by Hillis and Wilcox (2005:Fig. 2A) and
that from a much smaller sample of North
American Rana by Frost et al. (2006a:Fig. 2B)
differ in minor ways that do not affect either
taxonomic proposal. Moreover, the clades
Frost et al. (2006a) called Rana and Litho-
bates are two of the few named clades that are
not consistently supported in phylogenetic
analyses of North American ranids. The
monophyly of these groups is controversial
(especially with regard to the placement of
Rana sylvatica; for a review of this issue, see
Hillis and Wilcox, 2005). Use of Lithobates for
the majority of North American Rana is not
only unnecessary and destabilizing for taxo-
nomy, it is also highly confusing. The only
clear phylogenetic definition of the clade
Lithobates was provided by Hillis and Wilcox
(2005), who defined it as ‘‘The clade stemming
from the most recent common ancestor of
Rana palmipes Spix 1824, Rana vaillanti
Brocchi 1877, Rana bwana Hillis and de Sa
´
1988, and Rana juliani Hillis and de Sa
´
1988.’’
Under this phylogenetic definition and the
phylogenies of Hillis and Wilcox (2005) and
Frost et al. (2006a), no species in the clade
Lithobates occur within the United States.
The taxonomy of Frost et al. (2006a) not
only destabilizes the names of well known
species, it actually provides much less infor-
mation on the phylogeny of North American
ranids compared to the taxonomy proposed
by Hillis (2007:Fig. 2); Frost et al. (2006a)
recognized two named clades while Hillis
(2007) recognized nine (Fig. 2). In addition,
unlike the taxonomy proposed by Frost et al.
(2006a), the named clades proposed by Hillis
(2007) reflect groups that are strongly and
consistently supported across multiple analy-
ses and data sets. Therefore, the classification
proposed by Hillis (2007) better fulfills both
goals of biological classification (facilitating
communication and reflecting evolutionary
relationships).
S
UMMARY AND RECOMMENDATIONS
Classifications are not the personal sand-
boxes of taxonomists. Promoting unnecessary
name changes has a huge negative impact on
the field of taxonomy and more generally on
124 HERPETOLOGICA [Vol. 65, No. 2
FIG. 2.—Phylogenies of Rana from (A) Hillis and Wilcox (2005) and (B) Frost et al. (2006a). Asterisks in (A) indicate
those species that were sampled in both studies. Roman numerals denote those relationships that were reconstructed
differently in the two studies. In (A), the phylogeny is from Hillis and Wilcox (2005), and the taxonomic
recommendations follow Hillis (2007). Shaded boxes denote the clade that Frost et al. (2006a) termed Lithobates.
June 2009] HERPETOLOGICA 125
biology as a whole. It is a mistake to assume
that nonsystematists have no interest or stake
in scientific names. (In this context, one of us
[DCC] recognizes that his previous position
on changing generic names simply to have
more ‘‘informative’’ taxa—recognizing Silur-
ana as distinct from Xenopus [Cannatella and
de Sa
´
, 1993]—was mistaken.)
Historically, a major rationale for using
scientific names over common names was to
promote efficient communication because
common names varied widely among users,
regions, and languages. Ironically, because of
the recent flux in scientific names and the
publication of standard lists for common
names, common names often show more
stability (at least for standard English names).
Although Lithobates catesbeianus and Rana
catesbeiana may confuse some, nearly all users
recognize the American Bullfrog. If subjective
and unnecessary changes to taxon names
prevail, the result will be not only a great
disservice to the science of taxonomy but also
to all who use the results of taxonomy, from
laypersons to professional biologists. Such
changes have already brought the ire of many
biologists (Godfray and Knapp, 2004) and only
promote the increasing disregard of the field.
In recognizing these concerns and objections,
we take seriously the obligation of taxonomists
to serve the larger community with stable and
informative classifications.
These problems are not unique to herpe-
tology. All biology is faced with changing
classifications and the difficulties of updating
nomenclature. Taxonomic specialists are a tiny
fraction of the users of the taxonomies, and
specialists should be cognizant of the diverse
user community and its needs. Most important-
ly, changes to classifications that attempt to
maximize information content must minimize
any negative impacts on utility. So in summary,
we argue that taxonomic stability and mono-
phyly are primary goals, but stability is not to be
achieved at the expense of monophyly.
Below we make several recommendations;
these are not exhaustive, but are intended to
stimulate further discussion.
1. Because it is contrary to the letter and
spirit of the Code, scientific societies
should not regulate scientific names.
Lists of names should not be treated as
lists of officially accepted scientific
names. To avoid confusion, sponsorship
of a list should not be indicated by the
word ‘‘official.’’ However, name lists are
important for stabilizing common names,
so herpetological societies serve a vital
function in promulgating such lists.
2. Stable taxonomies of scientific names are
an important goal, and scientific societies
should promote the discussion and inter-
action needed to achieve this. Systema-
tists should accept responsibility for
providing stable and informative classifi-
cations to the biological community, and
the community of users should reject
new classifications that destabilize names
unnecessarily.
3. The scientific name of the species
(genus-species combination) should only
be changed when there is strong evi-
dence that the changes are necessary to
reflect evolutionary history.
4. Authors of lists should discuss alternative
taxonomic proposals when these exist.
5. Authors working on taxa for which there
are multiple recent or current proposed
scientific names should explain the
choice of names, i.e., their choice of
taxon concept.
6. Name lists should not be used to restrict
taxonomic freedom. Authors and editors
should be aware that no requirement
exists (in the Code or anywhere else) that
the most recent taxonomic proposals be
followed. Editors should not establish
policies that a particular list or taxonomic
revision be followed.
7. All name lists, and especially those
promoted by scientific societies, should
undergo extensive peer review. This will
ensure rigorous scholarship, discussions
of alternative proposals, and a broader
consensus of the societies’ members.
Acknowledgments.—We sought comments and feed-
back from numerous individuals. Although not everyone
agreed entirely with our opinions, we are grateful to all of
the following for their helpful discussions and comments:
A. J. Abrams, J. M. Brown, C. M. Edwards, O. Flores-
Villela, D. M. Green, M. Guerra, J. Hanken, T. R. Jones,
V. Leo
´
n-Re
`
gagnon, A. Larson, J. B. Losos, E. J. Routman,
M. J. Ryan, J. C. Santos, M. J. Sredl, B. L. Stuart, J. N.
Stuart, S. Swenson, R. Symula, R. J. Wassersug and
126 HERPETOLOGICA [Vol. 65, No. 2
especially to R. M. Brown, F. T. Burbrink, B. I. Crother,
K. de Queiroz, R. W. McDiarmid, P. C. Rosen, H. M.
Smith, M. Vences, and D. B. Wake. Preparation of this
paper was supported by a University of Texas Continuing
Fellowship to GBP and NSF grant EF 0334952 to DCC
and DMH.
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APPENDIX I
The Taxonomy of Middle American Bufo
Frost et al. (2006a) resurrected Cranopsis Cope 1875
for the clade of Middle American Bufo identified by
Pauly et al. (2004:Fig. 1A). Later, Frost et al. (2006b)
pointed out their oversight: that Cranopsis was preoc-
cupied, that Cope himself had realized this (1889) and
proposed the replacement name Cranophryne, and that
Ollotis Cope 1875 had priority as the valid name for the
genus.
The story continues because another name, Incilius
Cope 1863, is relevant. Cope (1863) did not designate a
type-species for Incilius. Frost et al. (2006a:222), acting
under the First Reviser principle (Article 24) designated
Bufo cognatus Say 1823 as the type-species of Incilius
Cope 1863 to ensure that Incilius would be a synonym of
Anaxyrus (i.e., the Nearctic Bufo sensu Pauly et al. [2004],
which includes Bufo cognatus: see Fig. 1A). However,
Frost et al. (2006a) were apparently unaware that a type-
species for Incilius had already been designated. As
indicated by Dunn and Dunn (1940), Kellogg (1932:29)
designated Bufo coniferus Cope 1862, one of the species
originally included in the genus, as the type-species of
Incilius. Bufo coniferus is in the Middle American Clade
(sensu Pauly et al., 2004), which is treated as Ollotis by
Frost et al. (2008).
Under Article 70.2, Kellogg’s fixation of type-species
takes precedence over that of Frost et al. (2006a).
Therefore, Incilius has priority over Ollotis as the older
available name for the genus comprising species in the
Middle American Clade of Bufo. However, readers should
not construe our statement about priority of Incilius over
Ollotis as being a taxonomic action (see Article 8.3 of the
Code) or ‘‘synonymy by implication.’’ We do not recognize
Ollotis or Incilius as the valid genus name for the Middle
American Clade, in order to avoid the 33 new combina-
tions that would result. Rather, as discussed and depicted
in Figure 1, we consider these species in the Middle
American Clade to be part of Bufo.
128 HERPETOLOGICA [Vol. 65, No. 2